Pregenerated sensors for MRPL11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024902Ensembl transcript IDs: ENSMUST00000025836.6, ENSMUST00000235229.2, ENSMUST00000236917.2, ENSMUST00000237974.2
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTTGAGGCTGCGTTCACCTGTAGGGCAGCTCACACCTGTGAAGGCTaGGAACTGTCAGTATTGGTCCCCATCTCTGGGGTCTCAGGAGAG | + |
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Preference number: 1 (lower is better) Translates to: VEAAFTCRAAHTCEG*ELSVLVPISGVSGE Trigger: CTCTCCTGAGACCCCAGAGATGGGGACCAATACTGACAGTTCCCAGCCTTCACAGGTGTGAGCTGCCCTACAGGTGAACGCAGCCTCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR CCA 90 bp | ACCTACTCAGAGCCTGAATGTTACGACACGTGCCCCGGAGGCTCATaGGCTGAAGGCTTGCTTCCCAGTGTGGAAGGTGGTGGAATCCTT | + |
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Preference number: 1 (lower is better) Translates to: TYSEPECYDTCPGGS*AEGLLPSVEGGGIL Trigger: AAGGATTCCACCACCTTCCACACTGGGAAGCAAGCCTTCAGCCCATGAGCCTCCGGGGCACGTGTCGTAACATTCAGGCTCTGAGTAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR CCA 90 bp | GGCCTTAAGGCGGGGACTGGTCCAGGTGAGGCTACCTCACACAGATaGCCCTATGTATGTGACTGTTTCCACTGTACCATGCTGTCATAC | + |
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Preference number: 1 (lower is better) Translates to: GLKAGTGPGEATSHR*PYVCDCFHCTMLSY Trigger: GTATGACAGCATGGTACAGTGGAAACAGTCACATACATAGGGCCATCTGTGTGAGGTAGCCTCACCTGGACCAGTCCCCGCCTTAAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR CCA 90 bp | ACCAAACTTAGTAAGGAGCCGGGTGGGGTAATGCACACCTTTAACTaGAGCACTGAGAGGTCAGGCTGTAGCCTAGCCAGCCAGTTTCAG | + |
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Preference number: 1 (lower is better) Translates to: TKLSKEPGGVMHTFN*STERSGCSLASQFQ Trigger: CTGAAACTGGCTGGCTAGGCTACAGCCTGACCTCTCAGTGCTCCAGTTAAAGGTGTGCATTACCCCACCCGGCTCCTTACTAAGTTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR CCA 90 bp | CAGGCAGGTCAAGGGTCCACAAGGACTTCTCAGGCAGGTGTCTACTaGAATTTCACTTATGTAGGTCTGGGCTGTGATTCGGCTGTTCTC | + |
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Preference number: 1 (lower is better) Translates to: QAGQGSTRTSQAGVY*NFTYVGLGCDSAVL Trigger: GAGAACAGCCGAATCACAGCCCAGACCTACATAAGTGAAATTCCAGTAGACACCTGCCTGAGAAGTCCTTGTGGACCCTTGACCTGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR CCA 90 bp | GGTGGTGCAAGCTTTAGTCCCAGCAATGTGGAAGGCAGAGGCAGGTaGATCTCCGTGAGTTCAAGGATATCCAGAGATCCTATCTCAAAA | + |
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Preference number: 1 (lower is better) Translates to: GGASFSPSNVEGRGR*ISVSSRISRDPISK Trigger: TTTTGAGATAGGATCTCTGGATATCCTTGAACTCACGGAGATCCACCTGCCTCTGCCTTCCACATTGCTGGGACTAAAGCTTGCACCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR TCA 90 bp | GAGATTCTGCCTCAGAAACAATCATGTCAACTCAGCAGGGAGGCCTaGAGCTGCCCCTGGATAAAGGATAACCCTATCTGTGGTCTGAAT | + |
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Preference number: 1 (lower is better) Translates to: EILPQKQSCQLSREA*SCPWIKDNPICGLN Trigger: ATTCAGACCACAGATAGGGTTATCCTTTATCCAGGGGCAGCTTCAGGCCTCCCTGCTGAGTTGACATGATTGTTTCTGAGGCAGAATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR GCA 90 bp | CCAGCTCCAGGGGATCCAATACCCTCTTCTGACAGACACCAAGCATaGACACAGTGCACTCACATATATGCAGGCAAAACAGTCACATAT | + |
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Preference number: 1 (lower is better) Translates to: PAPGDPIPSSDRHQA*TQCTHIYAGKTVTY Trigger: ATATGTGACTGTTTTGCCTGCATATATGTGAGTGCACTGTGTGCATGCTTGGTGTCTGTCAGAAGAGGGTATTGGATCCCCTGGAGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR CCA 90 bp | GTTGCTCTTACAGAGAACCCAGGTTCAACTCCAGGATCCACATACTaGTTCACAACTACCCATAAATCCAGCTCCAGGGGATCCAATACC | + |
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Preference number: 1 (lower is better) Translates to: VALTENPGSTPGSTY*FTTTHKSSSRGSNT Trigger: GGTATTGGATCCCCTGGAGCTGGATTTATGGGTAGTTGTGAACCAGTATGTGGATCCTGGAGTTGAACCTGGGTTCTCTGTAAGAGCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR GCA 90 bp | ATAAAGGATAACCCTATCTGTGGTCTGAATTCTCTGTCAGGCTCCTaGTTCTCAGATACAAACTCCCCAACAGTTATACTAAGAAAAGAC | + |
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Preference number: 1 (lower is better) Translates to: IKDNPICGLNSLSGS*FSDTNSPTVILRKD Trigger: GTCTTTTCTTAGTATAACTGTTGGGGAGTTTGTATCTGAGAAGCAGGAGCCTGACAGAGAATTCAGACCACAGATAGGGTTATCCTTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR-3UTR TCA 90 bp | AGGTCAAGGGCCCCCAAGGACTTCTCAGGCAGGTCAAGGGCCCCCAAGGACTTTCTGGCTCTGGCTGAATaGGGCCCTGGGTTTCATCTC | + |
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Preference number: 2 (lower is better) Translates to: RSRAPKDFSGRSRAPKDFLALAE*GPGFHL Trigger: GAGATGAAACCCAGGGCCTCATTCAGCCAGAGCCAG...AAAGTCCTTGGGGGCCCTTGACCTGCCTGAGAAGTCCTTGGGGGCCCTTGACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR-3UTR CCA 90 bp | AGGTCAAGGGCCCCCAAGGACTTCTCAGGCAGGTCAAGGGCCCCCAAGGACTTTGCTCAGCTTCCTCTGTaGCCCCCTTTCTCAGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: RSRAPKDFSGRSRAPKDFAQLPL*PPFSAS Trigger: AGAGGCTGAGAAAGGGGGCCACAGAGGAAGCTGAGC...AAAGTCCTTGGGGGCCCTTGACCTGCCTGAGAAGTCCTTGGGGGCCCTTGACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR CAA 90 bp | CCTGAATGTTACGACACGTGCCCCGGAGGCTCATGGGCTGAAGGCTaGCTTCCCAGTGTGGAAGGTGGTGGAATCCTTAAGAAGTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: PECYDTCPGGSWAEG*LPSVEGGGILKKWG Trigger: CCCCCACTTCTTAAGGATTCCACCACCTTCCACACTGGGAAGCAAGCCTTCAGCCCATGAGCCTCCGGGGCACGTGTCGTAACATTCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR-3UTR TCA 90 bp | AGACCAAGGGTCCCCAAGGACTTCTCAGGCAGACCAAGGGTCCCCAAGGACTTCTCTCAGGAGAGAAGCTaGGAGTTGATGACAAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: RPRVPKDFSGRPRVPKDFSQERS*ELMTKD Trigger: ATCCTTTGTCATCAACTCTCAGCTTCTCTCCTGAGA...GAAGTCCTTGGGGACCCTTGGTCTGCCTGAGAAGTCCTTGGGGACCCTTGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR-3UTR CCA 90 bp | AGAAATCGGGTTGCCATGAAGTCCTTTGGCTCAGCTTCCTCTGTGGCCCCCTTTCAGAGTGTAGAAAGTTaGGGTCACTTCTTGGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: RNRVAMKSFGSASSVAPFQSVES*GHFLAA Trigger: AGCTGCCAAGAAGTGACCCCAACTTTCTACACTCTG...AAAGGGGGCCACAGAGGAAGCTGAGCCAAAGGACTTCATGGCAACCCGATTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236917.2 |
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| 3UTR-3UTR TCA 90 bp | AATAATGCCCAGCATGCAACACACGGCAAACACAGACTTCATCTTTCCTGTCAAGGCAGCTCACACCTGTaGAGGCTGGGAACTGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: NNAQHATHGKHRLHLSCQGSSHL*RLGTVS Trigger: ACTGACAGTTCCCAGCCTTCACAGGTGTGAGCTGCC...TTGACAGGAAAGATGAAGTCTGTGTTTGCCGTGTGTTGCATGCTGGGCATTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR-3UTR TCA 90 bp | TATGGTGATGAGCTACCATGTGGTTGCTGGGAACTGAACACAGGACCTCTGGAATCCAATACCCTCTTCTaGCAGACACCAAGCATGCAC | + |
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Preference number: 2 (lower is better) Translates to: YGDELPCGCWELNTGPLESNTLF*QTPSMH Trigger: GTGCATGCTTGGTGTCTGTCAGAAGAGGGTATTGGA...TTCCAGAGGTCCTGTGTTCAGTTCCCAGCAACCACATGGTAGCTCATCACCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR-3UTR GCA 90 bp | GAAGGCAGAGGCAGGTGGATCTCCGTGAGTTCAAGGATATCCAGAGATCCTATCCAAGCATGCACACAGTaGACTCACATATATGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: EGRGRWISVSSRISRDPIQACTQ*THIYAG Trigger: GCCTGCATATATGTGAGTGCACTGTGTGCATGCTTG...GATAGGATCTCTGGATATCCTTGAACTCACGGAGATCCACCTGCCTCTGCCTTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR-3UTR TCA 90 bp | GTCCACAAGGACTTCTCAGGCAGGTGTCTACTGGAATTTCACTTATGTAGGTCTTACCTACTCAGAGCCTaGATGTTACGACACGTGCCC | + |
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Preference number: 2 (lower is better) Translates to: VHKDFSGRCLLEFHLCRSYLLRA*MLRHVP Trigger: GGGCACGTGTCGTAACATTCAGGCTCTGAGTAGGTA...AGACCTACATAAGTGAAATTCCAGTAGACACCTGCCTGAGAAGTCCTTGTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR-3UTR TCA 90 bp | AATAATGCCCAGCATGCAACACACGGCAAACACAGACTTCATCTTTCCTGTCAAAGTGCTCTTAACCTCTaGGCCATCTCTCCAGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: NNAQHATHGKHRLHLSCQSALNL*AISPAP Trigger: TGGGGCTGGAGAGATGGCTCAGAGGTTAAGAGCACT...TTGACAGGAAAGATGAAGTCTGTGTTTGCCGTGTGTTGCATGCTGGGCATTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR-3UTR TCA 90 bp | AATAATGCCCAGCATGCAACACACGGCAAACACAGACTTCATCTTTCCTGTCAAGTGGTTGCTGGGAACTaGACACAGGACCTCTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: NNAQHATHGKHRLHLSCQVVAGN*TQDLWK Trigger: CTTCCAGAGGTCCTGTGTTCAGTTCCCAGCAACCAC...TTGACAGGAAAGATGAAGTCTGTGTTTGCCGTGTGTTGCATGCTGGGCATTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR-3UTR CCA 90 bp | GGATATTTATTCAGGCTTGATCCCCTGGCACAGCAAATGTACAGAAACATGTCAGCTCAGCTTCCTCTGTaGCCCCCTTTCTCAGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: GYLFRLDPLAQQMYRNMSAQLPL*PPFSAS Trigger: AGAGGCTGAGAAAGGGGGCCACAGAGGAAGCTGAGC...TGACATGTTTCTGTACATTTGCTGTGCCAGGGGATCAAGCCTGAATAAATATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025836.6 ENSMUST00000236917.2 |
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| 3UTR-3UTR CCA 90 bp | GAAACATGTCAGGAAACTAGAAATCGGGTTGCCATGAAGTCCTTTGGCTCAGCTTGCCATGAAGTCCTTTaGCTCAGCTTCCTCTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: ETCQETRNRVAMKSFGSACHEVL*LSFLCG Trigger: GCCACAGAGGAAGCTGAGCCAAAGGACTTCATGGCA...AGCTGAGCCAAAGGACTTCATGGCAACCCGATTTCTAGTTTCCTGACATGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025836.6 ENSMUST00000236917.2 |
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| 3UTR-3UTR CCA 90 bp | ATAATGCCCAGCATGCAACACACGGCAAACACAGACTTCATCTTTCCTGTCAATATTGGTCCCCATCTCTaGGGTCTCAGGAGAGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: IMPSMQHTANTDFIFPVNIGPHL*GLRREA Trigger: AGCTTCTCTCCTGAGACCCCAGAGATGGGGACCAAT...ATTGACAGGAAAGATGAAGTCTGTGTTTGCCGTGTGTTGCATGCTGGGCATTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR-3UTR CCA 90 bp | CACGGCAAACACAGACTTCATCTTTCCTGTCAATTCTGCCTCTCTTCTGAGAGAGGAATCCTTAAGAAGTaGGGGCTATGCCCTGTATGG | + |
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Preference number: 2 (lower is better) Translates to: HGKHRLHLSCQFCLSSERGILKK*GLCPVW Trigger: CCATACAGGGCATAGCCCCCACTTCTTAAGGATTCC...TCTCTCAGAAGAGAGGCAGAATTGACAGGAAAGATGAAGTCTGTGTTTGCCGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR-3UTR CCA 90 bp | GCAACACACGGCAAACACAGACTTCATCTTTCCTGTCAATTCTGCCTCTCTTCTATGCACACCTTTAACTaGAGCACTGAGAGGTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: ATHGKHRLHLSCQFCLSSMHTFN*STERSG Trigger: GCCTGACCTCTCAGTGCTCCAGTTAAAGGTGTGCAT...AGAAGAGAGGCAGAATTGACAGGAAAGATGAAGTCTGTGTTTGCCGTGTGTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR-3UTR CCA 90 bp | ATAATGCCCAGCATGCAACACACGGCAAACACAGACTTCATCTTTCCTGTCAATGCTTGCTTCCCAGTGTaGAAGGTGGTGGAATCCTTA | + |
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Preference number: 2 (lower is better) Translates to: IMPSMQHTANTDFIFPVNACFPV*KVVESL Trigger: TAAGGATTCCACCACCTTCCACACTGGGAAGCAAGC...ATTGACAGGAAAGATGAAGTCTGTGTTTGCCGTGTGTTGCATGCTGGGCATTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR-3UTR CCA 90 bp | TGCTCTGAAGTGTTGGGAATAGAAGTTGAGGCTTTGTGTAAGGAGCAGCTCCATCATAGGATTTCTCCCTaGGCTCTACTCCACTTGTAC | + |
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Preference number: 2 (lower is better) Translates to: CSEVLGIEVEALCKEQLHHRISP*ALLHLY Trigger: GTACAAGTGGAGTAGAGCCCAGGGAGAAATCCTATG...ATGGAGCTGCTCCTTACACAAAGCCTCAACTTCTATTCCCAACACTTCAGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR-3UTR TCA 90 bp | GCAACACACGGCAAACACAGACTTCATCTTTCCTGTCAATTCTGCCTCTCTTCTATGGCCCTATGTATGTaGCTGTTTCCACTGTACCAT | + |
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Preference number: 2 (lower is better) Translates to: ATHGKHRLHLSCQFCLSSMALCM*LFPLYH Trigger: ATGGTACAGTGGAAACAGTCACATACATAGGGCCAT...AGAAGAGAGGCAGAATTGACAGGAAAGATGAAGTCTGTGTTTGCCGTGTGTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR-3UTR TCA 90 bp | CACGGCAAACACAGACTTCATCTTTCCTGTCAATTCTGCCTCTCTTCTGAGAGACAGGCTTATGTGCTCTaGAGTGTTGGGAATAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: HGKHRLHLSCQFCLSSERQAYVL*SVGNRS Trigger: ACTTCTATTCCCAACACTTCAGAGCACATAAGCCTG...TCTCTCAGAAGAGAGGCAGAATTGACAGGAAAGATGAAGTCTGTGTTTGCCGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR-3UTR CCA 90 bp | ACAAAGGATATTTATTCAGGCTTGATCCCCTGGCACAGCAAATGTACAGAAACATGCCATGAAGTCCTTTaGCTCAGCTTCCTCTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: TKDIYSGLIPWHSKCTETCHEVL*LSFLCG Trigger: GCCACAGAGGAAGCTGAGCCAAAGGACTTCATGGCA...TGTTTCTGTACATTTGCTGTGCCAGGGGATCAAGCCTGAATAAATATCCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025836.6 ENSMUST00000236917.2 |
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| 3UTR-3UTR GCA 90 bp | AGTTATACTAAGAAAAGACAAGCAACACAGCCAAGCCTTAGTGTCTGTGGACCCGTGCACTCACATATATaGAGGCAAAACAGTCACATA | + |
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Preference number: 2 (lower is better) Translates to: SYTKKRQATQPSLSVCGPVHSHI*RQNSHI Trigger: TATGTGACTGTTTTGCCTGCATATATGTGAGTGCAC...GGGTCCACAGACACTAAGGCTTGGCTGTGTTGCTTGTCTTTTCTTAGTATAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR-3UTR CCA 90 bp | GCCATACTCCAGCACCATGAATCAGAAGCCAAATCAATACCTTTTCTTTATAAACACACCTGTGAAGGCTaGGAACTGTCAGTATTGGTC | + |
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Preference number: 2 (lower is better) Translates to: AILQHHESEAKSIPFLYKHTCEG*ELSVLV Trigger: GACCAATACTGACAGTTCCCAGCCTTCACAGGTGTG...TTTATAAAGAAAAGGTATTGATTTGGCTTCTGATTCATGGTGCTGGAGTATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR CCA 72 bp | GAGCCTGAATGTTACGACACGTGCCCCGGAGGCTCATaGGCTGAAGGCTTGCTTCCCAGTGTGGAAGGTGGT | + |
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Preference number: 3 (lower is better) Translates to: EPECYDTCPGGS*AEGLLPSVEGG Trigger: ACCACCTTCCACACTGGGAAGCAAGCCTTCAGCCCATGAGCCTCCGGGGCACGTGTCGTAACATTCAGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR GCA 72 bp | CAGCCAAGCCTTAGTGTCTGTGGACCCCATCGACTGTaGCTTCTCTCATCCCCGAGGGAAGAGCACAGGCTT | + |
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Preference number: 3 (lower is better) Translates to: QPSLSVCGPHRL*LLSSPREEHRL Trigger: AAGCCTGTGCTCTTCCCTCGGGGATGAGAGAAGGCACAGTCGATGGGGTCCACAGACACTAAGGCTTGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR CCA 72 bp | GCGTTCACCTGTAGGGCAGCTCACACCTGTGAAGGCTaGGAACTGTCAGTATTGGTCCCCATCTCTGGGGTC | + |
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Preference number: 3 (lower is better) Translates to: AFTCRAAHTCEG*ELSVLVPISGV Trigger: GACCCCAGAGATGGGGACCAATACTGACAGTTCCCAGCCTTCACAGGTGTGAGCTGCCCTACAGGTGAACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR GCA 72 bp | ACTTGTACCTACTCAGAGCCTGAATGTTACGACACGTaGCCCGGAGGCTCATGGGCTGAAGGCTTGCTTCCC | + |
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Preference number: 3 (lower is better) Translates to: TCTYSEPECYDT*PGGSWAEGLLP Trigger: GGGAAGCAAGCCTTCAGCCCATGAGCCTCCGGGGCACGTGTCGTAACATTCAGGCTCTGAGTAGGTACAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR CCA 72 bp | CCGGAGGCTCATGGGCTGAAGGCTTGCTTCCCAGTGTaGAAGGTGGTGGAATCCTTAAGAAGTGGGGGCTAT | + |
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Preference number: 3 (lower is better) Translates to: PEAHGLKACFPV*KVVESLRSGGY Trigger: ATAGCCCCCACTTCTTAAGGATTCCACCACCTTCCACACTGGGAAGCAAGCCTTCAGCCCATGAGCCTCCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR CCA 72 bp | AGTAAGGAGCCGGGTGGGGTAATGCACACCTTTAACTaGAGCACTGAGAGGTCAGGCTGTAGCCTAGCCAGC | + |
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Preference number: 3 (lower is better) Translates to: SKEPGGVMHTFN*STERSGCSLAS Trigger: GCTGGCTAGGCTACAGCCTGACCTCTCAGTGCTCCAGTTAAAGGTGTGCATTACCCCACCCGGCTCCTTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR CCA 72 bp | GCGGGGACTGGTCCAGGTGAGGCTACCTCACACAGATaGCCCTATGTATGTGACTGTTTCCACTGTACCATG | + |
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Preference number: 3 (lower is better) Translates to: AGTGPGEATSHR*PYVCDCFHCTM Trigger: CATGGTACAGTGGAAACAGTCACATACATAGGGCCATCTGTGTGAGGTAGCCTCACCTGGACCAGTCCCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR-3UTR CAA 90 bp | ACCAAGGGTCCCCAAGGACTTCTCAGGCAGACCAAGGGTCCCCAAGGACTTCTCAAGAGCACTTGTTTGTaGCTCTTACAGAGAACCCAG | + |
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Preference number: 3 (lower is better) Translates to: TKGPQGLLRQTKGPQGLLKSTCL*LLQRTQ Trigger: CTGGGTTCTCTGTAAGAGCAACAAACAAGTGCTCTT...GAGAAGTCCTTGGGGACCCTTGGTCTGCCTGAGAAGTCCTTGGGGACCCTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR-3UTR CAA 90 bp | AGAAATCGGGTTGCCATGAAGTCCTTTGGCTCAGCTTCCTCTGTGGCCCCCTTTTCAGAGTGTAGAAAGTaGGGGTCACTTCTTGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: RNRVAMKSFGSASSVAPFSECRK*GSLLGS Trigger: GCTGCCAAGAAGTGACCCCAACTTTCTACACTCTGA...AAAGGGGGCCACAGAGGAAGCTGAGCCAAAGGACTTCATGGCAACCCGATTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000236917.2 |
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| 3UTR-3UTR CAA 90 bp | TATGGTGATGAGCTACCATGTGGTTGCTGGGAACTGAACACAGGACCTCTGGAACAACCTTCACTAATGTaGGCCTTAAGGCGGGGACTG | + |
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Preference number: 3 (lower is better) Translates to: YGDELPCGCWELNTGPLEQPSLM*ALRRGL Trigger: CAGTCCCCGCCTTAAGGCCAACATTAGTGAAGGTTG...TTCCAGAGGTCCTGTGTTCAGTTCCCAGCAACCACATGGTAGCTCATCACCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR TCA 72 bp | CAGAAACATGTCAGGAAACTAGAAATCGGGTTGCCATaGAGTCCTTTGGCTCAGCTTCCTCTGTGGCCCCCT | + |
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Preference number: 3 (lower is better) Translates to: QKHVRKLEIGLP*SPLAQLPLWPP Trigger: AGGGGGCCACAGAGGAAGCTGAGCCAAAGGACTTCATGGCAACCCGATTTCTAGTTTCCTGACATGTTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025836.6 ENSMUST00000236917.2 |
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| 3UTR TCA 72 bp | CATAAATCCAGCTCCAGGGGATCCAATACCCTCTTCTaGCAGACACCAAGCATGCACACAGTGCACTCACAT | + |
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Preference number: 3 (lower is better) Translates to: HKSSSRGSNTLF*QTPSMHTVHSH Trigger: ATGTGAGTGCACTGTGTGCATGCTTGGTGTCTGTCAGAAGAGGGTATTGGATCCCCTGGAGCTGGATTTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR TCA 72 bp | CCTCAGAAACAATCATGTCAACTCAGCAGGGAGGCCTaGAGCTGCCCCTGGATAAAGGATAACCCTATCTGT | + |
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Preference number: 3 (lower is better) Translates to: PQKQSCQLSREA*SCPWIKDNPIC Trigger: ACAGATAGGGTTATCCTTTATCCAGGGGCAGCTTCAGGCCTCCCTGCTGAGTTGACATGATTGTTTCTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR GCA 72 bp | CTTCTCTCATCCCCGAGGGAAGAGCACAGGCTTATGTaGTCTGAAGTGTTGGGAATAGAAGTTGAGGCTTTG | + |
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Preference number: 3 (lower is better) Translates to: LLSSPREEHRLM*SEVLGIEVEAL Trigger: CAAAGCCTCAACTTCTATTCCCAACACTTCAGAGCACATAAGCCTGTGCTCTTCCCTCGGGGATGAGAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
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| 3UTR CCA 72 bp | ACAGAGAACCCAGGTTCAACTCCAGGATCCACATACTaGTTCACAACTACCCATAAATCCAGCTCCAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: TENPGSTPGSTY*FTTTHKSSSRG Trigger: TCCCCTGGAGCTGGATTTATGGGTAGTTGTGAACCAGTATGTGGATCCTGGAGTTGAACCTGGGTTCTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
||
| 3UTR CCA 72 bp | CAAGGGTCCACAAGGACTTCTCAGGCAGGTGTCTACTaGAATTTCACTTATGTAGGTCTGGGCTGTGATTCG | + |
|
Preference number: 3 (lower is better) Translates to: QGSTRTSQAGVY*NFTYVGLGCDS Trigger: CGAATCACAGCCCAGACCTACATAAGTGAAATTCCAGTAGACACCTGCCTGAGAAGTCCTTGTGGACCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
||
| 3UTR TCA 72 bp | CCAGCAATGTGGAAGGCAGAGGCAGGTGGATCTCCGTaGGTTCAAGGATATCCAGAGATCCTATCTCAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PAMWKAEAGGSP*VQGYPEILSQK Trigger: TTTTTGAGATAGGATCTCTGGATATCCTTGAACTCACGGAGATCCACCTGCCTCTGCCTTCCACATTGCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
||
| 3UTR GCA 72 bp | GATGGCCCTATGTATGTGACTGTTTCCACTGTACCATaGTGTCATACAGCAAGTGAGCCTTGCCATACTCCA | + |
|
Preference number: 3 (lower is better) Translates to: DGPMYVTVSTVP*CHTASEPCHTP Trigger: TGGAGTATGGCAAGGCTCACTTGCTGTATGACAGCATGGTACAGTGGAAACAGTCACATACATAGGGCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
||
| 3UTR GCA 72 bp | GGGGATCCAATACCCTCTTCTGACAGACACCAAGCATaGACACAGTGCACTCACATATATGCAGGCAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: GDPIPSSDRHQA*TQCTHIYAGKT Trigger: TGTTTTGCCTGCATATATGTGAGTGCACTGTGTGCATGCTTGGTGTCTGTCAGAAGAGGGTATTGGATCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
||
| 3UTR GCA 72 bp | GATCTCACTATATATGGTGATGAGCTACCATGTGGTTaGTGGGAACTGAACACAGGACCTCTGGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DLTIYGDELPCG*WELNTGPLEEQ Trigger: CTGCTCTTCCAGAGGTCCTGTGTTCAGTTCCCAGCAACCACATGGTAGCTCATCACCATATATAGTGAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
||
| 3UTR CCA 72 bp | CTCACTATATATGGTGATGAGCTACCATGTGGTTGCTaGGAACTGAACACAGGACCTCTGGAAGAGCAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: LTIYGDELPCGC*ELNTGPLEEQL Trigger: TAGCTGCTCTTCCAGAGGTCCTGTGTTCAGTTCCCAGCAACCACATGGTAGCTCATCACCATATATAGTGAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
||
| 3UTR-3UTR CAA 90 bp | ATAAATCCAGCTCCAGGGGATCCAATACCCTCTTCTGACAGACACCAAGCATGCGATATTTATTCAGGCTaGATCCCCTGGCACAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: INPAPGDPIPSSDRHQACDIYSG*IPWHSK Trigger: TTTGCTGTGCCAGGGGATCAAGCCTGAATAAATATC...GCATGCTTGGTGTCTGTCAGAAGAGGGTATTGGATCCCCTGGAGCTGGATTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
||
| 3UTR-3UTR CAA 90 bp | AGTTATACTAAGAAAAGACAAGCAACACAGCCAAGCCTTAGTGTCTGTGGACCCGGTAAGAGCACTTGTTaGTTGCTCTTACAGAGAACC | + |
|
Preference number: 3 (lower is better) Translates to: SYTKKRQATQPSLSVCGPGKSTC*LLLQRT Trigger: GGTTCTCTGTAAGAGCAACAAACAAGTGCTCTTACC...GGGTCCACAGACACTAAGGCTTGGCTGTGTTGCTTGTCTTTTCTTAGTATAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
||
| 3UTR GCA 72 bp | AACCCTATCTGTGGTCTGAATTCTCTGTCAGGCTCCTaGTTCTCAGATACAAACTCCCCAACAGTTATACTA | + |
|
Preference number: 3 (lower is better) Translates to: NPICGLNSLSGS*FSDTNSPTVIL Trigger: TAGTATAACTGTTGGGGAGTTTGTATCTGAGAAGCAGGAGCCTGACAGAGAATTCAGACCACAGATAGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
||
| 3UTR-3UTR CAA 90 bp | GACAAAGGATATTTATTCAGGCTTGATCCCCTGGCACAGCAAATGTACAGAAACGATATTTATTCAGGCTaGATCCCCTGGCACAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: DKGYLFRLDPLAQQMYRNDIYSG*IPWHSK Trigger: TTTGCTGTGCCAGGGGATCAAGCCTGAATAAATATC...GTTTCTGTACATTTGCTGTGCCAGGGGATCAAGCCTGAATAAATATCCTTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025836.6 ENSMUST00000236917.2 |
||
| 3UTR CCA 72 bp | TTGATGACAAAGGATATTTATTCAGGCTTGATCCCCTaGCACAGCAAATGTACAGAAACATGTCAGGAAACT | + |
|
Preference number: 3 (lower is better) Translates to: LMTKDIYSGLIP*HSKCTETCQET Trigger: AGTTTCCTGACATGTTTCTGTACATTTGCTGTGCCAGGGGATCAAGCCTGAATAAATATCCTTTGTCATCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
||
| CDS-3UTR GCA 90 bp | AGGTCAAGGGCCCCCAAGGACTTCTCAGGCAGGTCAAGGGCCCCCAAGGACTTTCCTTCACCACTCGAATaGCCAGGGAACGGGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSRAPKDFSGRSRAPKDFPSPLE*PGNGQS Trigger: GCTCTGCCCGTTCCCTGGGCATTCGAGTGGTGAAGG...AAAGTCCTTGGGGGCCCTTGACCTGCCTGAGAAGTCCTTGGGGGCCCTTGACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
||
| CDS-3UTR GCA 90 bp | AGGCAGACCAAGGGTCCCCAAGGACTTCTCAGGCAGACCAAGGGTCCCCAAGGACAAACTCACCAGGCCTaGCACCTCTTTCCCTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: RQTKGPQGLLRQTKGPQGQTHQA*HLFPCM Trigger: CATACAGGGAAAGAGGTGGCAGGCCTGGTGAGTTTG...TCCTTGGGGACCCTTGGTCTGCCTGAGAAGTCCTTGGGGACCCTTGGTCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
||
| CDS-3UTR GCA 90 bp | AATCGGGTTGCCATGAAGTCCTTTGGCTCAGCTTCCTCTGTGGCCCCCTTTCTCCCTTCACCACTCGAATaGCCAGGGAACGGGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NRVAMKSFGSASSVAPFLPSPLE*PGNGQS Trigger: GCTCTGCCCGTTCCCTGGGCATTCGAGTGGTGAAGG...GAGAAAGGGGGCCACAGAGGAAGCTGAGCCAAAGGACTTCATGGCAACCCGATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025836.6 ENSMUST00000236917.2 |
||
| 3UTR CAA 72 bp | TACGACACGTGCCCCGGAGGCTCATGGGCTGAAGGCTaGCTTCCCAGTGTGGAAGGTGGTGGAATCCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: YDTCPGGSWAEG*LPSVEGGGILK Trigger: CTTAAGGATTCCACCACCTTCCACACTGGGAAGCAAGCCTTCAGCCCATGAGCCTCCGGGGCACGTGTCGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
||
| CDS-3UTR TCA 90 bp | ATAATGCCCAGCATGCAACACACGGCAAACACAGACTTCATCTTTCCTGTCAATCGGCCTCGGGCTTCTTaGGGGTCCGAGTGGCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: IMPSMQHTANTDFIFPVNRPRAS*GSEWPG Trigger: GCCGGGCCACTCGGACCCTCAAGAAGCCCGAGGCCG...ATTGACAGGAAAGATGAAGTCTGTGTTTGCCGTGTGTTGCATGCTGGGCATTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
||
| CDS-3UTR CCA 90 bp | GAAGGCAGAGGCAGGTGGATCTCCGTGAGTTCAAGGATATCCAGAGATCCTATCGGCCCAGGAATAGCTTaGCCTGCTCGCACGATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: EGRGRWISVSSRISRDPIGPGIA*PARTMD Trigger: GTCCATCGTGCGAGCAGGCCAAGCTATTCCTGGGCC...GATAGGATCTCTGGATATCCTTGAACTCACGGAGATCCACCTGCCTCTGCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
||
| CDS-3UTR TCA 90 bp | ACAAAGGATATTTATTCAGGCTTGATCCCCTGGCACAGCAAATGTACAGAAACACGGCCTCGGGCTTCTTaGGGGTCCGAGTGGCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TKDIYSGLIPWHSKCTETRPRAS*GSEWPG Trigger: GCCGGGCCACTCGGACCCTCAAGAAGCCCGAGGCCG...TGTTTCTGTACATTTGCTGTGCCAGGGGATCAAGCCTGAATAAATATCCTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025836.6 ENSMUST00000236917.2 |
||
| CDS-3UTR GCA 90 bp | AGGCAGACCAAGGGTCCCCAAGGACTTCTCAGGCAGACCAAGGGTCCCCAAGGAGCAATCTCATATACGTaGTTCAAACTCACCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RQTKGPQGLLRQTKGPQGAISYT*FKLTRP Trigger: AGGCCTGGTGAGTTTGAAGCACGTATATGAGATTGC...TCCTTGGGGACCCTTGGTCTGCCTGAGAAGTCCTTGGGGACCCTTGGTCTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
||
| CDS-3UTR GCA 90 bp | AGAAATCGGGTTGCCATGAAGTCCTTTGGCTCAGCTTCCTCTGTGGCCCCCTTTCAAACTCACCAGGCCTaGCACCTCTTTCCCTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: RNRVAMKSFGSASSVAPFQTHQA*HLFPCM Trigger: CATACAGGGAAAGAGGTGGCAGGCCTGGTGAGTTTG...AAAGGGGGCCACAGAGGAAGCTGAGCCAAAGGACTTCATGGCAACCCGATTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025836.6 ENSMUST00000236917.2 |
||
| CDS-3UTR CCA 90 bp | GAAACATGTCAGGAAACTAGAAATCGGGTTGCCATGAAGTCCTTTGGCTCAGCTGGCCCAGGAATAGCTTaGCCTGCTCGCACGATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ETCQETRNRVAMKSFGSAGPGIA*PARTMD Trigger: GTCCATCGTGCGAGCAGGCCAAGCTATTCCTGGGCC...AGCTGAGCCAAAGGACTTCATGGCAACCCGATTTCTAGTTTCCTGACATGTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025836.6 ENSMUST00000236917.2 |
||
| CDS-3UTR GCA 90 bp | GAAGGCAGAGGCAGGTGGATCTCCGTGAGTTCAAGGATATCCAGAGATCCTATCGACAGGGGCACATCTTaGATGGCAAAAGCATCATCC | + |
|
Preference number: 4 (lower is better) Translates to: EGRGRWISVSSRISRDPIDRGTS*MAKASS Trigger: GGATGATGCTTTTGCCATGCAAGATGTGCCCCTGTC...GATAGGATCTCTGGATATCCTTGAACTCACGGAGATCCACCTGCCTCTGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
||
| CDS-3UTR TCA 90 bp | TCAGGAAACAACATCTTCAACCCTGAACATAGGATTTCTCCCTGGGCTCTACTCTGGGCTGCCCAATCTTaGGCTCAAATGTCCTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SGNNIFNPEHRISPWALLWAAQS*AQMSCR Trigger: CCGACAGGACATTTGAGCTCAAGATTGGGCAGCCCA...GAGTAGAGCCCAGGGAGAAATCCTATGTTCAGGGTTGAAGATGTTGTTTCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
||
| CDS-3UTR GCA 90 bp | AGAAATCGGGTTGCCATGAAGTCCTTTGGCTCAGCTTCCTCTGTGGCCCCCTTTCTCGATCCCAGCAGCTaGCTTCAAAAAGTAAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RNRVAMKSFGSASSVAPFLDPSS*LQKVRN Trigger: GTTTCTTACTTTTTGAAGGCAGCTGCTGGGATCGAG...AAAGGGGGCCACAGAGGAAGCTGAGCCAAAGGACTTCATGGCAACCCGATTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025836.6 ENSMUST00000236917.2 |
||
| CDS-3UTR TCA 90 bp | ACAGAAACATGTCAGGAAACTAGAAATCGGGTTGCCATGAAGTCCTTTGGCTCATGGGCTGCCCAATCTTaGGCTCAAATGTCCTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TETCQETRNRVAMKSFGSWAAQS*AQMSCR Trigger: CCGACAGGACATTTGAGCTCAAGATTGGGCAGCCCA...TGAGCCAAAGGACTTCATGGCAACCCGATTTCTAGTTTCCTGACATGTTTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025836.6 ENSMUST00000236917.2 |
||
| CDS-3UTR TCA 90 bp | ATAATGCCCAGCATGCAACACACGGCAAACACAGACTTCATCTTTCCTGTCAATAACGGGCAGAGCCAATaGTGGAACGGACCACAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IMPSMQHTANTDFIFPVNNGQSQ*WNGPQK Trigger: CTTCTGTGGTCCGTTCCATCATTGGCTCTGCCCGTT...ATTGACAGGAAAGATGAAGTCTGTGTTTGCCGTGTGTTGCATGCTGGGCATTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
||
| CDS-3UTR GCA 90 bp | GGCTCCTGCTTCTCAGATACAAACTCCCCAACAGTTATACTAAGAAAAGACAAGAGCCTCCAGTTCTTCTaGACTGAGGTCCTTCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: GSCFSDTNSPTVILRKDKSLQFF*TEVLHH Trigger: GTGGTGAAGGACCTCAGTGCAGAAGAACTGGAGGCT...CTTGTCTTTTCTTAGTATAACTGTTGGGGAGTTTGTATCTGAGAAGCAGGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
||
| CDS-3UTR GCA 90 bp | ATTTATTCAGGCTTGATCCCCTGGCACAGCAAATGTACAGAAACATGTCAGGAAGACAGGGGCACATCTTaGATGGCAAAAGCATCATCC | + |
|
Preference number: 4 (lower is better) Translates to: IYSGLIPWHSKCTETCQEDRGTS*MAKASS Trigger: GGATGATGCTTTTGCCATGCAAGATGTGCCCCTGTC...TTCCTGACATGTTTCTGTACATTTGCTGTGCCAGGGGATCAAGCCTGAATAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025836.6 ENSMUST00000236917.2 |
||
| CDS-3UTR GCA 90 bp | ATAATGCCCAGCATGCAACACACGGCAAACACAGACTTCATCTTTCCTGTCAATCTCGATCCCAGCAGCTaGCTTCAAAAAGTAAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: IMPSMQHTANTDFIFPVNLDPSS*LQKVRN Trigger: GTTTCTTACTTTTTGAAGGCAGCTGCTGGGATCGAG...ATTGACAGGAAAGATGAAGTCTGTGTTTGCCGTGTGTTGCATGCTGGGCATTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
||
| 3UTR CAA 72 bp | ATGTGCTCTGAAGTGTTGGGAATAGAAGTTGAGGCTTaGTGTAAGGAGCAGCTCCATCAGGAAACAACATCT | + |
|
Preference number: 4 (lower is better) Translates to: MCSEVLGIEVEA*CKEQLHQETTS Trigger: AGATGTTGTTTCCTGATGGAGCTGCTCCTTACACAAAGCCTCAACTTCTATTCCCAACACTTCAGAGCACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
||
| CDS-3UTR TCA 90 bp | GACAAAGGATATTTATTCAGGCTTGATCCCCTGGCACAGCAAATGTACAGAAACAAATCTGCCTCTTTCTaGGCAGCCAAAAACACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DKGYLFRLDPLAQQMYRNKSASF*AAKNTA Trigger: AGCTGTGTTTTTGGCTGCTCAGAAAGAGGCAGATTT...GTTTCTGTACATTTGCTGTGCCAGGGGATCAAGCCTGAATAAATATCCTTTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
||
| 3UTR CAA 72 bp | TTTCCTGTCAATTCTGCCTCTCTTCTGAGAGAACACTaGATGTTTTGTAGAATGGGAAAACAGGAGGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FPVNSASLLREH*MFCRMGKQEVK Trigger: CTTGACCTCCTGTTTTCCCATTCTACAAAACATCAAGTGTTCTCTCAGAAGAGAGGCAGAATTGACAGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
||
| CDS-3UTR CAA 90 bp | TGTGGCCCCCTTTCTCAGCCTCTCACTTCAAATTCTCAGAGTGTAGAAAGTTGGCCGGCCTCGGGCTTCTaGAGGGTCCGAGTGGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: CGPLSQPLTSNSQSVESWPASGF*RVRVAR Trigger: CCGGGCCACTCGGACCCTCAAGAAGCCCGAGGCCGG...CCAACTTTCTACACTCTGAGAATTTGAAGTGAGAGGCTGAGAAAGGGGGCCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025836.6 ENSMUST00000236917.2 |
||
| CDS-3UTR CAA 90 bp | ACAGAAACATGTCAGGAAACTAGAAATCGGGTTGCCATGAAGTCCTTTGGCTCACCGGCCTCGGGCTTCTaGAGGGTCCGAGTGGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TETCQETRNRVAMKSFGSPASGF*RVRVAR Trigger: CCGGGCCACTCGGACCCTCAAGAAGCCCGAGGCCGG...TGAGCCAAAGGACTTCATGGCAACCCGATTTCTAGTTTCCTGACATGTTTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025836.6 ENSMUST00000236917.2 |
||
| CDS-3UTR CAA 90 bp | AGAAATCGGGTTGCCATGAAGTCCTTTGGCTCAGCTTCCTCTGTGGCCCCCTTTAGGCCCAGGAATAGCTaGGCCTGCTCGCACGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: RNRVAMKSFGSASSVAPFRPRNS*ACSHDG Trigger: TCCATCGTGCGAGCAGGCCAAGCTATTCCTGGGCCT...AAAGGGGGCCACAGAGGAAGCTGAGCCAAAGGACTTCATGGCAACCCGATTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025836.6 ENSMUST00000236917.2 |
||
| CDS-3UTR CAA 90 bp | GGTTGCCATGAAGTCCTTTGGCTCAGCTTCCTCTGTGGCCCCCTTTCTCAGCCTAGACAGGGGCACATCTaGCATGGCAAAAGCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: GCHEVLWLSFLCGPLSQPRQGHI*HGKSII Trigger: GATGATGCTTTTGCCATGCAAGATGTGCCCCTGTCT...AGGCTGAGAAAGGGGGCCACAGAGGAAGCTGAGCCAAAGGACTTCATGGCAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025836.6 ENSMUST00000236917.2 |
||
| CDS-3UTR CAA 90 bp | TGTGGCCCCCTTTCTCAGCCTCTCACTTCAAATTCTCAGAGTGTAGAAAGTTGGAGGCCCAGGAATAGCTaGGCCTGCTCGCACGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: CGPLSQPLTSNSQSVESWRPRNS*ACSHDG Trigger: TCCATCGTGCGAGCAGGCCAAGCTATTCCTGGGCCT...CCAACTTTCTACACTCTGAGAATTTGAAGTGAGAGGCTGAGAAAGGGGGCCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025836.6 ENSMUST00000236917.2 |
||
| CDS TCA 90 bp | TTCTCGTTGAACTCTTTGCAGAACTGGTTGATAGAGACACCTCGCTaGCCCAAGATGGGACCTAGTGGAGGCCCAGGAATAGCTTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: FSLNSLQNWLIETPR*PKMGPSGGPGIAWP Trigger: AGGCCAAGCTATTCCTGGGCCTCCACTAGGTCCCATCTTGGGTCAGCGAGGTGTCTCTATCAACCAGTTCTGCAAAGAGTTCAACGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025836.6 ENSMUST00000236917.2 ENSMUST00000237974.2 |
||
| CDS GCA 90 bp | GCAGAGCCAATGATGGAACGGACCACAGAAGACAGGGGCACATCTTaGATGGCAAAAGCATCATCCTTAGCTTTGACACAGGCAATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AEPMMERTTEDRGTS*MAKASSLALTQAIS Trigger: TGAGATTGCCTGTGTCAAAGCTAAGGATGATGCTTTTGCCATGCAAGATGTGCCCCTGTCTTCTGTGGTCCGTTCCATCATTGGCTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025836.6 ENSMUST00000236917.2 ENSMUST00000237974.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGAAACAACATCTTCAACCCTGAACATAGGATTTCTCCCTGGGCTCTACTCTCCTTTGTCTTCTCGTaGAACTCTTTGCAGAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: SGNNIFNPEHRISPWALLSFVFS*NSLQNW Trigger: CCAGTTCTGCAAAGAGTTCAACGAGAAGACAAAGGA...GAGTAGAGCCCAGGGAGAAATCCTATGTTCAGGGTTGAAGATGTTGTTTCCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025836.6 |
||
| CDS-3UTR CAA 90 bp | ACAAAGGATATTTATTCAGGCTTGATCCCCTGGCACAGCAAATGTACAGAAACAAGACAGGGGCACATCTaGCATGGCAAAAGCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: TKDIYSGLIPWHSKCTETRQGHI*HGKSII Trigger: GATGATGCTTTTGCCATGCAAGATGTGCCCCTGTCT...TGTTTCTGTACATTTGCTGTGCCAGGGGATCAAGCCTGAATAAATATCCTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025836.6 ENSMUST00000236917.2 |
||
| CDS TCA 72 bp | TCACCACTCGAATGCCCAGGGAACGGGCAGAGCCAATaGTGGAACGGACCACAGAAGACAGGGGCACATCTT | + |
|
Preference number: 6 (lower is better) Translates to: SPLECPGNGQSQ*WNGPQKTGAHL Trigger: AAGATGTGCCCCTGTCTTCTGTGGTCCGTTCCATCATTGGCTCTGCCCGTTCCCTGGGCATTCGAGTGGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025836.6 ENSMUST00000236917.2 ENSMUST00000237974.2 |
||
| CDS GCA 72 bp | GGCAATCTCATATACGTGCTTCAAACTCACCAGGCCTaGCACCTCTTTCCCTGTATGCCGGGCCCCCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GNLIYVLQTHQA*HLFPCMPGPLL Trigger: GAGAAGGGGGCCCGGCATACAGGGAAAGAGGTGGCAGGCCTGGTGAGTTTGAAGCACGTATATGAGATTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025836.6 ENSMUST00000235229.2 ENSMUST00000236917.2 ENSMUST00000237974.2 |
||
| CDS CAA 90 bp | GAAGACAGGGGCACATCTTGCATGGCAAAAGCATCATCCTTAGCTTaGACACAGGCAATCTCATATACGTGCTTCAAACTCACCAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: EDRGTSCMAKASSLA*TQAISYTCFKLTRP Trigger: AGGCCTGGTGAGTTTGAAGCACGTATATGAGATTGCCTGTGTCAAAGCTAAGGATGATGCTTTTGCCATGCAAGATGTGCCCCTGTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025836.6 ENSMUST00000236917.2 ENSMUST00000237974.2 |
||
| CDS CAA 72 bp | GGCACATCTTGCATGGCAAAAGCATCATCCTTAGCTTaGACACAGGCAATCTCATATACGTGCTTCAAACTC | + |
|
Preference number: 6 (lower is better) Translates to: GTSCMAKASSLA*TQAISYTCFKL Trigger: GAGTTTGAAGCACGTATATGAGATTGCCTGTGTCAAAGCTAAGGATGATGCTTTTGCCATGCAAGATGTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025836.6 ENSMUST00000236917.2 ENSMUST00000237974.2 |
||