Pregenerated sensors for MRPL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029486Ensembl transcript IDs: ENSMUST00000036437.13, ENSMUST00000117766.8, ENSMUST00000121477.2
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTTTGGATCCCCTTCCCATAACTGGCTGCCTTATCTGGCCTCCGTaGGAGAGGATGTACCCAGTCCTGCTTCGACTTGACTTGCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: PLDPLPITGCLIWPP*ERMYPVLLRLDLPG Trigger: CCCTGGCAAGTCAAGTCGAAGCAGGACTGGGTACATCCTCTCCCACGGAGGCCAGATAAGGCAGCCAGTTATGGGAAGGGGATCCAAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| 3UTR GCA 90 bp | AACAGCCCTGCTGGTGATACAGCCTGGGGGAACGAGGGAGGATGCTaGTGTTCCTTCAGATGGCCATGTCTCCTCAAGGAATGTCACAAA | + |
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Preference number: 1 (lower is better) Translates to: NSPAGDTAWGNEGGC*CSFRWPCLLKECHK Trigger: TTTGTGACATTCCTTGAGGAGACATGGCCATCTGAAGGAACAGCAGCATCCTCCCTCGTTCCCCCAGGCTGTATCACCAGCAGGGCTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| 3UTR GCA 90 bp | ACTATCCCCACAACCCTTCTTCATCTTTCGTTTAGCTTTCACATCTaGAATGGCCGAGCACCACACACACAGAAGCAAACAGCCCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: TIPTTLLHLSFSFHI*NGRAPHTQKQTALL Trigger: CAGCAGGGCTGTTTGCTTCTGTGTGTGTGGTGCTCGGCCATTGCAGATGTGAAAGCTAAACGAAAGATGAAGAAGGGTTGTGGGGATAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| 3UTR TCA 90 bp | CTTGGGATTCTACCAAAATACAGAACACTGATGCTAAGGAAGGACTaGGGGAGCTGGAGGAGTCAAGGACACCACAAGACCTATAGGATC | + |
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Preference number: 1 (lower is better) Translates to: LGILPKYRTLMLRKD*GSWRSQGHHKTYRI Trigger: GATCCTATAGGTCTTGTGGTGTCCTTGACTCCTCCAGCTCCCTCAGTCCTTCCTTAGCATCAGTGTTCTGTATTTTGGTAGAATCCCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| 3UTR TCA 90 bp | CAAGTACCACTAAACCTGGTGAGCTCCACTGAGGAAGAAGGTTCTTaGTGTGTCTATTTGATGCTGGTTTCAAAGGGAAGTTCAAACGTC | + |
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Preference number: 1 (lower is better) Translates to: QVPLNLVSSTEEEGS*CVYLMLVSKGSSNV Trigger: GACGTTTGAACTTCCCTTTGAAACCAGCATCAAATAGACACATCAAGAACCTTCTTCCTCAGTGGAGCTCACCAGGTTTAGTGGTACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121477.2 |
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| 3UTR TCA 90 bp | GAAGGAAGTAAACTCCCAAGTACCACTAAACCTGGTGAGCTCCACTaGGGAAGAAGGTTCTTGATGTGTCTATTTGATGCTGGTTTCAAA | + |
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Preference number: 1 (lower is better) Translates to: EGSKLPSTTKPGELH*GRRFLMCLFDAGFK Trigger: TTTGAAACCAGCATCAAATAGACACATCAAGAACCTTCTTCCTCAGTGGAGCTCACCAGGTTTAGTGGTACTTGGGAGTTTACTTCCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121477.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCCAGGGCGGGTTGGTACCCATGGGGAGGCCTCCCCTTCTCAGAAGGAAAGGGAGGAAGAAGGGCTGTaGTCGGGATGGAAAGTGAAT | + |
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Preference number: 2 (lower is better) Translates to: LPGRVGTHGEASPSQKEREEEGL*SGWKVN Trigger: ATTCACTTTCCATCCCGATCACAGCCCTTCTTCCTC...CCTTTCCTTCTGAGAAGGGGAGGCCTCCCCATGGGTACCAACCCGCCCTGGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCAATGGCCGAGCACCACACACACAGAAGCAAACAGCCCTGCTGGTGATACAATGCTAAGGAAGGACTaGGGGAGCTGGAGGAGTCAA | + |
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Preference number: 2 (lower is better) Translates to: LQWPSTTHTEANSPAGDTMLRKD*GSWRSQ Trigger: TTGACTCCTCCAGCTCCCTCAGTCCTTCCTTAGCAT...TGTATCACCAGCAGGGCTGTTTGCTTCTGTGTGTGTGGTGCTCGGCCATTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCAATGGCCGAGCACCACACACACAGAAGCAAACAGCCCTGCTGGTGATACAGCCTCTGTTGTTTCTTaGCACACACATCCCCCAATA | + |
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Preference number: 2 (lower is better) Translates to: LQWPSTTHTEANSPAGDTASVVS*HTHPPI Trigger: TATTGGGGGATGTGTGTGTCAAGAAACAACAGAGGC...TGTATCACCAGCAGGGCTGTTTGCTTCTGTGTGTGTGGTGCTCGGCCATTGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGAAAAATTGGCAAATAAAGCAATAGCTTTGGGCCCTTGCCTAGCATGCACAGAAGGGTCCCGGGGCTaGCTGGCCAGCCAGTTTGAT | + |
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Preference number: 2 (lower is better) Translates to: GEKLANKAIALGPCLACTEGSRG*LASQFD Trigger: ATCAAACTGGCTGGCCAGCCAGCCCCGGGACCCTTC...TGTGCATGCTAGGCAAGGGCCCAAAGCTATTGCTTTATTTGCCAATTTTTCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTGTGCGTGTATGTCTGTAGCTGTGCTCTGGAGGTCAGAGGTGCTTACAGTTCCTGGTGAGCTCCACTaGGGAAGAAGGTTCTTGATG | + |
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Preference number: 2 (lower is better) Translates to: ICACMSVAVLWRSEVLTVPGELH*GRRFLM Trigger: CATCAAGAACCTTCTTCCTCAGTGGAGCTCACCAGG...AACTGTAAGCACCTCTGACCTCCAGAGCACAGCTACAGACATACACGCACAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121477.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTCCTTCAGATGGCCATGTCTCCTCAAGGAATGTCACAAAACGAGAAACTGCGGCAATGGAAGAGTGTaGGGGTGGGACATGGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: CSFRWPCLLKECHKTRNCGNGRV*GWDMEK Trigger: CTTCTCCATGTCCCACCCTCACACTCTTCCATTGCC...GCAGTTTCTCGTTTTGTGACATTCCTTGAGGAGACATGGCCATCTGAAGGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCAACTGATGAAGACATCCTGTGTTGACCCCCAGACCCAAACACAGACACATATGCTAAGGAAGGACTaGGGGAGCTGGAGGAGTCAA | + |
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Preference number: 2 (lower is better) Translates to: KQLMKTSCVDPQTQTQTHMLRKD*GSWRSQ Trigger: TTGACTCCTCCAGCTCCCTCAGTCCTTCCTTAGCAT...ATGTGTCTGTGTTTGGGTCTGGGGGTCAACACAGGATGTCTTCATCAGTTGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCAACTGATGAAGACATCCTGTGTTGACCCCCAGACCCAAACACAGACACATGCCTCTGTTGTTTCTTaGCACACACATCCCCCAATA | + |
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Preference number: 2 (lower is better) Translates to: KQLMKTSCVDPQTQTQTHASVVS*HTHPPI Trigger: TATTGGGGGATGTGTGTGTCAAGAAACAACAGAGGC...ATGTGTCTGTGTTTGGGTCTGGGGGTCAACACAGGATGTCTTCATCAGTTGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTCAGATGGCCATGTCTCCTCAAGGAATGTCACAAAACGAGAAACTGCTTCTGAGGAAGAAGGGCTGTaGTCGGGATGGAAAGTGAAT | + |
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Preference number: 2 (lower is better) Translates to: PSDGHVSSRNVTKRETASEEEGL*SGWKVN Trigger: ATTCACTTTCCATCCCGATCACAGCCCTTCTTCCTC...AGAAGCAGTTTCTCGTTTTGTGACATTCCTTGAGGAGACATGGCCATCTGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGAAAAATTGGCAAATAAAGCAATAGCTTTGGGCCCTTGCCTAGCATGCACATGCTGTTCCTTCAGATaGCCATGTCTCCTCAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: GEKLANKAIALGPCLACTCCSFR*PCLLKE Trigger: TTCCTTGAGGAGACATGGCCATCTGAAGGAACAGCA...TGTGCATGCTAGGCAAGGGCCCAAAGCTATTGCTTTATTTGCCAATTTTTCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGAAGTAAACTCCCAAGTACCACTAAACCTGGTGAGCTCCACTGAGGAAGAACTTGATGTGTCTATTTaGTGCTGGTTTCAAAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: KEVNSQVPLNLVSSTEEELDVSI*CWFQRE Trigger: TTCCCTTTGAAACCAGCATCAAATAGACACATCAAG...TTCTTCCTCAGTGGAGCTCACCAGGTTTAGTGGTACTTGGGAGTTTACTTCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121477.2 |
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| 3UTR-3UTR CAA 90 bp | CTGTTGCAGAAACACAAGGACACAGGCTTCATCCCCAGCACCTACAGAGAAGGTACTTGCCAGGGCGGGTaGGTACCCATGGGGAGGCCT | + |
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Preference number: 3 (lower is better) Translates to: LLQKHKDTGFIPSTYREGTCQGG*VPMGRP Trigger: AGGCCTCCCCATGGGTACCAACCCGCCCTGGCAAGT...ACCTTCTCTGTAGGTGCTGGGGATGAAGCCTGTGTCCTTGTGTTTCTGCAACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| 3UTR CCA 72 bp | CACACAGAAGCAAACAGCCCTGCTGGTGATACAGCCTaGGGGAACGAGGGAGGATGCTGCTGTTCCTTCAGA | + |
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Preference number: 3 (lower is better) Translates to: HTEANSPAGDTA*GNEGGCCCSFR Trigger: TCTGAAGGAACAGCAGCATCCTCCCTCGTTCCCCCAGGCTGTATCACCAGCAGGGCTGTTTGCTTCTGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| 3UTR-3UTR CAA 90 bp | CCTTCAGATGGCCATGTCTCCTCAAGGAATGTCACAAAACGAGAAACTGCTTCTACTTGCCAGGGCGGGTaGGTACCCATGGGGAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PSDGHVSSRNVTKRETASTCQGG*VPMGRP Trigger: AGGCCTCCCCATGGGTACCAACCCGCCCTGGCAAGT...AGAAGCAGTTTCTCGTTTTGTGACATTCCTTGAGGAGACATGGCCATCTGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| 3UTR-3UTR CAA 90 bp | GCACCCAAATGGTGGCCCTTAACCATCTGTAACTCCAGCTCTAGGGCATCAGGACTGACTCTGACTCTGTaGCCTCCCTTTGGATCCCCT | + |
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Preference number: 3 (lower is better) Translates to: APKWWPLTICNSSSRASGLTLTL*PPFGSP Trigger: AGGGGATCCAAAGGGAGGCAACAGAGTCAGAGTCAG...TCCTGATGCCCTAGAGCTGGAGTTACAGATGGTTAAGGGCCACCATTTGGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| 3UTR-3UTR CAA 90 bp | CTGCAATGGCCGAGCACCACACACACAGAAGCAAACAGCCCTGCTGGTGATACATGCCTCTGTTGTTTCTaGACACACACATCCCCCAAT | + |
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Preference number: 3 (lower is better) Translates to: LQWPSTTHTEANSPAGDTCLCCF*THTSPN Trigger: ATTGGGGGATGTGTGTGTCAAGAAACAACAGAGGCA...TGTATCACCAGCAGGGCTGTTTGCTTCTGTGTGTGTGGTGCTCGGCCATTGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| 3UTR-3UTR CAA 90 bp | GCACCCAAATGGTGGCCCTTAACCATCTGTAACTCCAGCTCTAGGGCATCAGGATGCCTCTGTTGTTTCTaGACACACACATCCCCCAAT | + |
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Preference number: 3 (lower is better) Translates to: APKWWPLTICNSSSRASGCLCCF*THTSPN Trigger: ATTGGGGGATGTGTGTGTCAAGAAACAACAGAGGCA...TCCTGATGCCCTAGAGCTGGAGTTACAGATGGTTAAGGGCCACCATTTGGGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| 3UTR-3UTR CAA 90 bp | GCACCCAAATGGTGGCCCTTAACCATCTGTAACTCCAGCTCTAGGGCATCAGGAAGCATGCACATGGCCTaGCATCCAATTCTACGCATA | + |
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Preference number: 3 (lower is better) Translates to: APKWWPLTICNSSSRASGSMHMA*HPILRI Trigger: TATGCGTAGAATTGGATGCAAGGCCATGTGCATGCT...TCCTGATGCCCTAGAGCTGGAGTTACAGATGGTTAAGGGCCACCATTTGGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| 3UTR TCA 72 bp | CTACCAAAATACAGAACACTGATGCTAAGGAAGGACTaGGGGAGCTGGAGGAGTCAAGGACACCACAAGACC | + |
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Preference number: 3 (lower is better) Translates to: LPKYRTLMLRKD*GSWRSQGHHKT Trigger: GGTCTTGTGGTGTCCTTGACTCCTCCAGCTCCCTCAGTCCTTCCTTAGCATCAGTGTTCTGTATTTTGGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| 3UTR CCA 72 bp | GGCATCAGGAGCCCGCCTCTGACCACCACGGGTCCATaGTATACTTACATATATGTAGACCGAATACTAATA | + |
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Preference number: 3 (lower is better) Translates to: GIRSPPLTTTGP*YTYIYVDRILI Trigger: TATTAGTATTCGGTCTACATATATGTAAGTATACCATGGACCCGTGGTGGTCAGAGGCGGGCTCCTGATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| 3UTR-3UTR CAA 90 bp | CTGCAATGGCCGAGCACCACACACACAGAAGCAAACAGCCCTGCTGGTGATACAAAACTGCTTCTAGACTaGGGATTCTACCAAAATACA | + |
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Preference number: 3 (lower is better) Translates to: LQWPSTTHTEANSPAGDTKLLLD*GFYQNT Trigger: TGTATTTTGGTAGAATCCCAAGTCTAGAAGCAGTTT...TGTATCACCAGCAGGGCTGTTTGCTTCTGTGTGTGTGGTGCTCGGCCATTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| 3UTR GCA 72 bp | ACAACCCTTCTTCATCTTTCGTTTAGCTTTCACATCTaGAATGGCCGAGCACCACACACACAGAAGCAAACA | + |
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Preference number: 3 (lower is better) Translates to: TTLLHLSFSFHI*NGRAPHTQKQT Trigger: TGTTTGCTTCTGTGTGTGTGGTGCTCGGCCATTGCAGATGTGAAAGCTAAACGAAAGATGAAGAAGGGTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| 3UTR TCA 72 bp | CTAAACCTGGTGAGCTCCACTGAGGAAGAAGGTTCTTaGTGTGTCTATTTGATGCTGGTTTCAAAGGGAAGT | + |
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Preference number: 3 (lower is better) Translates to: LNLVSSTEEEGS*CVYLMLVSKGS Trigger: ACTTCCCTTTGAAACCAGCATCAAATAGACACATCAAGAACCTTCTTCCTCAGTGGAGCTCACCAGGTTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121477.2 |
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| 3UTR TCA 72 bp | AAACTCCCAAGTACCACTAAACCTGGTGAGCTCCACTaGGGAAGAAGGTTCTTGATGTGTCTATTTGATGCT | + |
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Preference number: 3 (lower is better) Translates to: KLPSTTKPGELH*GRRFLMCLFDA Trigger: AGCATCAAATAGACACATCAAGAACCTTCTTCCTCAGTGGAGCTCACCAGGTTTAGTGGTACTTGGGAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121477.2 |
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| 3UTR GCA 72 bp | GAAAAATTGGCAAATAAAGCAATAGCTTTGGGCCCTTaGCTAGCATGCACATGGCCTTGCATCCAATTCTAC | + |
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Preference number: 3 (lower is better) Translates to: EKLANKAIALGP*LACTWPCIQFY Trigger: GTAGAATTGGATGCAAGGCCATGTGCATGCTAGGCAAGGGCCCAAAGCTATTGCTTTATTTGCCAATTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| 3UTR TCA 72 bp | GCTCCACTGAGGAAGAAGGTTCTTGATGTGTCTATTTaGTGCTGGTTTCAAAGGGAAGTTCAAACGTCTGTT | + |
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Preference number: 3 (lower is better) Translates to: APLRKKVLDVSI*CWFQREVQTSV Trigger: AACAGACGTTTGAACTTCCCTTTGAAACCAGCATCAAATAGACACATCAAGAACCTTCTTCCTCAGTGGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121477.2 |
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| 3UTR-3UTR CAA 90 bp | GGAGAAAAATTGGCAAATAAAGCAATAGCTTTGGGCCCTTGCCTAGCATGCACAAAACTGCTTCTAGACTaGGGATTCTACCAAAATACA | + |
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Preference number: 3 (lower is better) Translates to: GEKLANKAIALGPCLACTKLLLD*GFYQNT Trigger: TGTATTTTGGTAGAATCCCAAGTCTAGAAGCAGTTT...TGTGCATGCTAGGCAAGGGCCCAAAGCTATTGCTTTATTTGCCAATTTTTCTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| 3UTR CAA 72 bp | ACCCAGTCCTGCTTCGACTTGACTTGCCAGGGCGGGTaGGTACCCATGGGGAGGCCTCCCCTTCTCAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: TQSCFDLTCQGG*VPMGRPPLLRR Trigger: CCTTCTGAGAAGGGGAGGCCTCCCCATGGGTACCAACCCGCCCTGGCAAGTCAAGTCGAAGCAGGACTGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| 3UTR CAA 72 bp | GAACACGCACGGGCTGGACCTACACAGCCTACACATTaGTGCAGATGTGCAGCATGGCCTCCGTGCGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: EHARAGPTQPTH*CRCAAWPPCGS Trigger: GGACCCGCACGGAGGCCATGCTGCACATCTGCACAAATGTGTAGGCTGTGTAGGTCCAGCCCGTGCGTGTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| 3UTR CAA 72 bp | GTCCTAACAGTGGAGCAGGGGCTGACTCTGACTCTGTaGCCTCCCTTTGGATCCCCTTCCCATAACTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: VLTVEQGLTLTL*PPFGSPSHNWL Trigger: CAGCCAGTTATGGGAAGGGGATCCAAAGGGAGGCAACAGAGTCAGAGTCAGCCCCTGCTCCACTGTTAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| CDS-3UTR GCA 90 bp | TTGCCAGGGCGGGTTGGTACCCATGGGGAGGCCTCCCCTTCTCAGAAGGAAAGGCCTGGGAAGCCATCTTaGAAAGACAATGCCTTTGAT | + |
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Preference number: 4 (lower is better) Translates to: LPGRVGTHGEASPSQKERPGKPS*KDNAFD Trigger: ATCAAAGGCATTGTCTTTGCAAGATGGCTTCCCAGG...CCTTTCCTTCTGAGAAGGGGAGGCCTCCCCATGGGTACCAACCCGCCCTGGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| CDS-3UTR CCA 90 bp | TTGCCAGGGCGGGTTGGTACCCATGGGGAGGCCTCCCCTTCTCAGAAGGAAAGGAGATTGGCAGCTATCTaGTCACTTGGCATATCCAAT | + |
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Preference number: 4 (lower is better) Translates to: LPGRVGTHGEASPSQKERRLAAI*SLGISN Trigger: ATTGGATATGCCAAGTGACCAGATAGCTGCCAATCT...CCTTTCCTTCTGAGAAGGGGAGGCCTCCCCATGGGTACCAACCCGCCCTGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| 3UTR CAA 72 bp | AAGTGGACTGGGAATGGCTCCATGGTAAAGTGCCTGTaGCAGAAACACAAGGACACAGGCTTCATCCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: KWTGNGSMVKCL*QKHKDTGFIPS Trigger: GCTGGGGATGAAGCCTGTGTCCTTGTGTTTCTGCAACAGGCACTTTACCATGGAGCCATTCCCAGTCCACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| CDS-3UTR GCA 90 bp | TTGCCAGGGCGGGTTGGTACCCATGGGGAGGCCTCCCCTTCTCAGAAGGAAAGGAGATTCAGTGGTCTGTaGTTACAGACCTCATTTATA | + |
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Preference number: 4 (lower is better) Translates to: LPGRVGTHGEASPSQKERRFSGL*LQTSFI Trigger: TATAAATGAGGTCTGTAAGCACAGACCACTGAATCT...CCTTTCCTTCTGAGAAGGGGAGGCCTCCCCATGGGTACCAACCCGCCCTGGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| CDS-3UTR GCA 90 bp | GCACCCAAATGGTGGCCCTTAACCATCTGTAACTCCAGCTCTAGGGCATCAGGACAGATCTGTTCCTCCTaGAAACGCAGCTCCATTTTC | + |
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Preference number: 4 (lower is better) Translates to: APKWWPLTICNSSSRASGQICSS*KRSSIF Trigger: GAAAATGGAGCTGCGTTTGCAGGAGGAACAGATCTG...TCCTGATGCCCTAGAGCTGGAGTTACAGATGGTTAAGGGCCACCATTTGGGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| CDS-3UTR CCA 90 bp | TTGCCAGGGCGGGTTGGTACCCATGGGGAGGCCTCCCCTTCTCAGAAGGAAAGGAATAACACTGGCAAATaGCTCCACTGTTTTCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: LPGRVGTHGEASPSQKERNNTGK*LHCFLF Trigger: AAAAAGAAAACAGTGGAGCCATTTGCCAGTGTTATT...CCTTTCCTTCTGAGAAGGGGAGGCCTCCCCATGGGTACCAACCCGCCCTGGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| CDS-3UTR CCA 90 bp | CTGCAATGGCCGAGCACCACACACACAGAAGCAAACAGCCCTGCTGGTGATACAAGATTGGCAGCTATCTaGTCACTTGGCATATCCAAT | + |
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Preference number: 4 (lower is better) Translates to: LQWPSTTHTEANSPAGDTRLAAI*SLGISN Trigger: ATTGGATATGCCAAGTGACCAGATAGCTGCCAATCT...TGTATCACCAGCAGGGCTGTTTGCTTCTGTGTGTGTGGTGCTCGGCCATTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| CDS-3UTR CCA 90 bp | CTGCAATGGCCGAGCACCACACACACAGAAGCAAACAGCCCTGCTGGTGATACAGTAGTAAACCTTCACTaGTTGAACTACGAAGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: LQWPSTTHTEANSPAGDTVVNLH*LNYEGR Trigger: CCTTCCTTCGTAGTTCAACCAGTGAAGGTTTACTAC...TGTATCACCAGCAGGGCTGTTTGCTTCTGTGTGTGTGGTGCTCGGCCATTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| CDS-3UTR TCA 90 bp | CTGTTGCAGAAACACAAGGACACAGGCTTCATCCCCAGCACCTACAGAGAAGGTTACTGGTTTTTCATCTaGTGTCTTTTCCTTGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: LLQKHKDTGFIPSTYREGYWFFI*CLFLGT Trigger: GGTGCCAAGGAAAAGACATCAGATGAAAAACCAGTA...ACCTTCTCTGTAGGTGCTGGGGATGAAGCCTGTGTCCTTGTGTTTCTGCAACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS-3UTR GCA 90 bp | ATCTGTGCGTGTATGTCTGTAGCTGTGCTCTGGAGGTCAGAGGTGCTTACAGTTCCTGGGAAGCCATCTTaGAAAGACAATGCCTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ICACMSVAVLWRSEVLTVPGKPS*KDNAFD Trigger: ATCAAAGGCATTGTCTTTGCAAGATGGCTTCCCAGG...AACTGTAAGCACCTCTGACCTCCAGAGCACAGCTACAGACATACACGCACAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121477.2 |
||
| CDS-3UTR TCA 90 bp | TGTGCTCTGGAGGTCAGAGGTGCTTACAGTTGGTTCTCCCCAGAAGGAAGTAAATACTGGTTTTTCATCTaGTGTCTTTTCCTTGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: CALEVRGAYSWFSPEGSKYWFFI*CLFLGT Trigger: GGTGCCAAGGAAAAGACATCAGATGAAAAACCAGTA...TTTACTTCCTTCTGGGGAGAACCAACTGTAAGCACCTCTGACCTCCAGAGCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000121477.2 |
||
| CDS-3UTR TCA 90 bp | CTGTTGCAGAAACACAAGGACACAGGCTTCATCCCCAGCACCTACAGAGAAGGTTCATTTATAACTGCTTaGAGATTGGCAGCTATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLQKHKDTGFIPSTYREGSFITA*RLAAIW Trigger: CCAGATAGCTGCCAATCTTCAAGCAGTTATAAATGA...ACCTTCTCTGTAGGTGCTGGGGATGAAGCCTGTGTCCTTGTGTTTCTGCAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS-3UTR GCA 90 bp | CCTTCAGATGGCCATGTCTCCTCAAGGAATGTCACAAAACGAGAAACTGCTTCTACAAGGGTAAAGAGATaGCTGGGAAGCCATCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSDGHVSSRNVTKRETASTRVKR*LGSHLA Trigger: TGCAAGATGGCTTCCCAGGCATCTCTTTACCCTTGT...AGAAGCAGTTTCTCGTTTTGTGACATTCCTTGAGGAGACATGGCCATCTGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS-3UTR GCA 90 bp | CTGTTGCAGAAACACAAGGACACAGGCTTCATCCCCAGCACCTACAGAGAAGGTGCAAAATGTCTGTTGTaGAAGAGACTGTTCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLQKHKDTGFIPSTYREGAKCLL*KRLFTE Trigger: TTCTGTGAACAGTCTCTTGCACAACAGACATTTTGC...ACCTTCTCTGTAGGTGCTGGGGATGAAGCCTGTGTCCTTGTGTTTCTGCAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS-3UTR GCA 90 bp | CTGGAGGTCAGAGGTGCTTACAGTTGGTTCTCCCCAGAAGGAAGTAAACTCCCAGCAAAATGTCTGTTGTaGAAGAGACTGTTCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LEVRGAYSWFSPEGSKLPAKCLL*KRLFTE Trigger: TTCTGTGAACAGTCTCTTGCACAACAGACATTTTGC...TGGGAGTTTACTTCCTTCTGGGGAGAACCAACTGTAAGCACCTCTGACCTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121477.2 |
||
| CDS-3UTR GCA 90 bp | CCTTCAGATGGCCATGTCTCCTCAAGGAATGTCACAAAACGAGAAACTGCTTCTCAGATCTGTTCCTCCTaGAAACGCAGCTCCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PSDGHVSSRNVTKRETASQICSS*KRSSIF Trigger: GAAAATGGAGCTGCGTTTGCAGGAGGAACAGATCTG...AGAAGCAGTTTCTCGTTTTGTGACATTCCTTGAGGAGACATGGCCATCTGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGTAAACTCCCAAGTACCACTAAACCTGGTGAGCTCCACTGAGGAAGAACAGATCTGTTCCTCCTaGAAACGCAGCTCCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KEVNSQVPLNLVSSTEEEQICSS*KRSSIF Trigger: GAAAATGGAGCTGCGTTTGCAGGAGGAACAGATCTG...TTCTTCCTCAGTGGAGCTCACCAGGTTTAGTGGTACTTGGGAGTTTACTTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121477.2 |
||
| CDS-3UTR CCA 90 bp | GCTCTGGAGGTCAGAGGTGCTTACAGTTGGTTCTCCCCAGAAGGAAGTAAACTCATAATTCAAGCATTTTaGGGATGTCACGACCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: ALEVRGAYSWFSPEGSKLIIQAF*GCHDQW Trigger: CCATTGGTCGTGACATCCCCAAAATGCTTGAATTAT...GAGTTTACTTCCTTCTGGGGAGAACCAACTGTAAGCACCTCTGACCTCCAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121477.2 |
||
| CDS-3UTR GCA 90 bp | TGTTCCTTCAGATGGCCATGTCTCCTCAAGGAATGTCACAAAACGAGAAACTGCCCTGGGAAGCCATCTTaGAAAGACAATGCCTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CSFRWPCLLKECHKTRNCPGKPS*KDNAFD Trigger: ATCAAAGGCATTGTCTTTGCAAGATGGCTTCCCAGG...GCAGTTTCTCGTTTTGTGACATTCCTTGAGGAGACATGGCCATCTGAAGGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS-3UTR GCA 90 bp | GATGGCCATGTCTCCTCAAGGAATGTCACAAAACGAGAAACTGCTTCTAGACTTACAAGGGTAAAGAGATaGCTGGGAAGCCATCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DGHVSSRNVTKRETASRLTRVKR*LGSHLA Trigger: TGCAAGATGGCTTCCCAGGCATCTCTTTACCCTTGT...AAGTCTAGAAGCAGTTTCTCGTTTTGTGACATTCCTTGAGGAGACATGGCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS-3UTR GCA 90 bp | CTGGAGGTCAGAGGTGCTTACAGTTGGTTCTCCCCAGAAGGAAGTAAACTCCCAGCTATAACTTACTGTTaGTATTTTGGTGCTGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LEVRGAYSWFSPEGSKLPAITYC*YFGAEE Trigger: TTCCTCAGCACCAAAATAGCAACAGTAAGTTATAGC...TGGGAGTTTACTTCCTTCTGGGGAGAACCAACTGTAAGCACCTCTGACCTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121477.2 |
||
| CDS-3UTR TCA 90 bp | TGTTCCTTCAGATGGCCATGTCTCCTCAAGGAATGTCACAAAACGAGAAACTGCTACTGGTTTTTCATCTaGTGTCTTTTCCTTGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: CSFRWPCLLKECHKTRNCYWFFI*CLFLGT Trigger: GGTGCCAAGGAAAAGACATCAGATGAAAAACCAGTA...GCAGTTTCTCGTTTTGTGACATTCCTTGAGGAGACATGGCCATCTGAAGGAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAACTGATGAAGACATCCTGTGTTGACCCCCAGACCCAAACACAGACACATGCAAAATGTCTGTTGTaGAAGAGACTGTTCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KQLMKTSCVDPQTQTQTHAKCLL*KRLFTE Trigger: TTCTGTGAACAGTCTCTTGCACAACAGACATTTTGC...ATGTGTCTGTGTTTGGGTCTGGGGGTCAACACAGGATGTCTTCATCAGTTGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS-3UTR TCA 90 bp | TGTTCCTTCAGATGGCCATGTCTCCTCAAGGAATGTCACAAAACGAGAAACTGCTCATTTATAACTGCTTaGAGATTGGCAGCTATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CSFRWPCLLKECHKTRNCSFITA*RLAAIW Trigger: CCAGATAGCTGCCAATCTTCAAGCAGTTATAAATGA...GCAGTTTCTCGTTTTGTGACATTCCTTGAGGAGACATGGCCATCTGAAGGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS-3UTR CCA 90 bp | CCTTCAGATGGCCATGTCTCCTCAAGGAATGTCACAAAACGAGAAACTGCTTCTATAATTCAAGCATTTTaGGGATGTCACGACCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: PSDGHVSSRNVTKRETASIIQAF*GCHDQW Trigger: CCATTGGTCGTGACATCCCCAAAATGCTTGAATTAT...AGAAGCAGTTTCTCGTTTTGTGACATTCCTTGAGGAGACATGGCCATCTGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS-3UTR CCA 90 bp | GGAGAAAAATTGGCAAATAAAGCAATAGCTTTGGGCCCTTGCCTAGCATGCACAGTAGTAAACCTTCACTaGTTGAACTACGAAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GEKLANKAIALGPCLACTVVNLH*LNYEGR Trigger: CCTTCCTTCGTAGTTCAACCAGTGAAGGTTTACTAC...TGTGCATGCTAGGCAAGGGCCCAAAGCTATTGCTTTATTTGCCAATTTTTCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS-3UTR GCA 90 bp | GTAAAAGTGGACTGGGAATGGCTCCATGGTAAAGTGCCTGTTGCAGAAACACAAAGATTCAGTGGTCTGTaGTTACAGACCTCATTTATA | + |
|
Preference number: 4 (lower is better) Translates to: VKVDWEWLHGKVPVAETQRFSGL*LQTSFI Trigger: TATAAATGAGGTCTGTAAGCACAGACCACTGAATCT...TTGTGTTTCTGCAACAGGCACTTTACCATGGAGCCATTCCCAGTCCACTTTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS-3UTR CCA 90 bp | GTAAAAGTGGACTGGGAATGGCTCCATGGTAAAGTGCCTGTTGCAGAAACACAATTCACCCATTATTTCTaGGACAGCTACATAAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VKVDWEWLHGKVPVAETQFTHYF*DSYIKV Trigger: GACTTTTATGTAGCTGTCCCAGAAATAATGGGTGAA...TTGTGTTTCTGCAACAGGCACTTTACCATGGAGCCATTCCCAGTCCACTTTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS-3UTR CCA 90 bp | CCTTCAGATGGCCATGTCTCCTCAAGGAATGTCACAAAACGAGAAACTGCTTCTTTCACCCATTATTTCTaGGACAGCTACATAAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PSDGHVSSRNVTKRETASFTHYF*DSYIKV Trigger: GACTTTTATGTAGCTGTCCCAGAAATAATGGGTGAA...AGAAGCAGTTTCTCGTTTTGTGACATTCCTTGAGGAGACATGGCCATCTGAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS-3UTR CCA 90 bp | GGAGAAAAATTGGCAAATAAAGCAATAGCTTTGGGCCCTTGCCTAGCATGCACAAGCTATCTGGTCACTTaGCATATCCAATGTTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: GEKLANKAIALGPCLACTSYLVT*HIQCCY Trigger: ATAGCAACATTGGATATGCCAAGTGACCAGATAGCT...TGTGCATGCTAGGCAAGGGCCCAAAGCTATTGCTTTATTTGCCAATTTTTCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS-3UTR CCA 90 bp | AAGGAAGTAAACTCCCAAGTACCACTAAACCTGGTGAGCTCCACTGAGGAAGAAAATAACACTGGCAAATaGCTCCACTGTTTTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KEVNSQVPLNLVSSTEEENNTGK*LHCFLF Trigger: AAAAAGAAAACAGTGGAGCCATTTGCCAGTGTTATT...TTCTTCCTCAGTGGAGCTCACCAGGTTTAGTGGTACTTGGGAGTTTACTTCCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121477.2 |
||
| CDS-3UTR CCA 90 bp | CATGTCTCCTCAAGGAATGTCACAAAACGAGAAACTGCTTCTAGACTTGGGATTAGCTATCTGGTCACTTaGCATATCCAATGTTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: HVSSRNVTKRETASRLGISYLVT*HIQCCY Trigger: ATAGCAACATTGGATATGCCAAGTGACCAGATAGCT...AATCCCAAGTCTAGAAGCAGTTTCTCGTTTTGTGACATTCCTTGAGGAGACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| 3UTR CAA 72 bp | CAACAACAACAATCAAAATCCTGTCCTCTTTGTAAATaGATATTTCCAACACGGATGAATCCGGTTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QQQQSKSCPLCK*IFPTRMNPVPE Trigger: TTCTGGAACCGGATTCATCCGTGTTGGAAATATCAATTTACAAAGAGGACAGGATTTTGATTGTTGTTGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS-3UTR CCA 90 bp | ATGTCACAAAACGAGAAACTGCTTCTAGACTTGGGATTCTACCAAAATACAGAAAATAACACTGGCAAATaGCTCCACTGTTTTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MSQNEKLLLDLGFYQNTENNTGK*LHCFLF Trigger: AAAAAGAAAACAGTGGAGCCATTTGCCAGTGTTATT...TTCTGTATTTTGGTAGAATCCCAAGTCTAGAAGCAGTTTCTCGTTTTGTGACAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS-3UTR CAA 90 bp | TTGCCAGGGCGGGTTGGTACCCATGGGGAGGCCTCCCCTTCTCAGAAGGAAAGGAACACAGCAACCTTGTaGACTTCTGAGGAGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPGRVGTHGEASPSQKERNTATL*TSEEKR Trigger: CCTCTTCTCCTCAGAAGTCAACAAGGTTGCTGTGTT...CCTTTCCTTCTGAGAAGGGGAGGCCTCCCCATGGGTACCAACCCGCCCTGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS-3UTR CAA 90 bp | TTGCCAGGGCGGGTTGGTACCCATGGGGAGGCCTCCCCTTCTCAGAAGGAAAGGGCAGCAAAATGTCTGTaGTGCAAGAGACTGTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: LPGRVGTHGEASPSQKERAAKCL*CKRLFT Trigger: TGTGAACAGTCTCTTGCACAACAGACATTTTGCTGC...CCTTTCCTTCTGAGAAGGGGAGGCCTCCCCATGGGTACCAACCCGCCCTGGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS-3UTR CAA 90 bp | TTGCCAGGGCGGGTTGGTACCCATGGGGAGGCCTCCCCTTCTCAGAAGGAAAGGGCAAAGACAATGCCTTaGATGATGTATCAAGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPGRVGTHGEASPSQKERAKTMP*MMYQDS Trigger: AGAGTCTTGATACATCATCAAAGGCATTGTCTTTGC...CCTTTCCTTCTGAGAAGGGGAGGCCTCCCCATGGGTACCAACCCGCCCTGGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS-3UTR CAA 90 bp | TTGCCAGGGCGGGTTGGTACCCATGGGGAGGCCTCCCCTTCTCAGAAGGAAAGGAATAATTCAAGCATTTaGGGGATGTCACGACCAATG | + |
|
Preference number: 5 (lower is better) Translates to: LPGRVGTHGEASPSQKERNNSSI*GMSRPM Trigger: CATTGGTCGTGACATCCCCAAAATGCTTGAATTATT...CCTTTCCTTCTGAGAAGGGGAGGCCTCCCCATGGGTACCAACCCGCCCTGGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS-3UTR CAA 90 bp | GCACCCAAATGGTGGCCCTTAACCATCTGTAACTCCAGCTCTAGGGCATCAGGAGGCAGCTTCTGCCGTTaGAGTTTCTTCCGTTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: APKWWPLTICNSSSRASGGSFCR*SFFRFS Trigger: GCTGAAACGGAAGAAACTCAAACGGCAGAAGCTGCC...TCCTGATGCCCTAGAGCTGGAGTTACAGATGGTTAAGGGCCACCATTTGGGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS-3UTR CAA 90 bp | CTGCAATGGCCGAGCACCACACACACAGAAGCAAACAGCCCTGCTGGTGATACAGTAAACCTTCACTGGTaGAACTACGAAGGAAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LQWPSTTHTEANSPAGDTVNLHW*NYEGRH Trigger: GTGCCTTCCTTCGTAGTTCAACCAGTGAAGGTTTAC...TGTATCACCAGCAGGGCTGTTTGCTTCTGTGTGTGTGGTGCTCGGCCATTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS-3UTR CAA 90 bp | GCACCCAAATGGTGGCCCTTAACCATCTGTAACTCCAGCTCTAGGGCATCAGGAAACACAGCAACCTTGTaGACTTCTGAGGAGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: APKWWPLTICNSSSRASGNTATL*TSEEKR Trigger: CCTCTTCTCCTCAGAAGTCAACAAGGTTGCTGTGTT...TCCTGATGCCCTAGAGCTGGAGTTACAGATGGTTAAGGGCCACCATTTGGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS-3UTR CAA 90 bp | CTGTTGCAGAAACACAAGGACACAGGCTTCATCCCCAGCACCTACAGAGAAGGTGCAGCAAAATGTCTGTaGTGCAAGAGACTGTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: LLQKHKDTGFIPSTYREGAAKCL*CKRLFT Trigger: TGTGAACAGTCTCTTGCACAACAGACATTTTGCTGC...ACCTTCTCTGTAGGTGCTGGGGATGAAGCCTGTGTCCTTGTGTTTCTGCAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS-3UTR CAA 90 bp | CTGCAATGGCCGAGCACCACACACACAGAAGCAAACAGCCCTGCTGGTGATACAAATAATTCAAGCATTTaGGGGATGTCACGACCAATG | + |
|
Preference number: 5 (lower is better) Translates to: LQWPSTTHTEANSPAGDTNNSSI*GMSRPM Trigger: CATTGGTCGTGACATCCCCAAAATGCTTGAATTATT...TGTATCACCAGCAGGGCTGTTTGCTTCTGTGTGTGTGGTGCTCGGCCATTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS-3UTR CAA 90 bp | CTGTTGCAGAAACACAAGGACACAGGCTTCATCCCCAGCACCTACAGAGAAGGTCAGCTATCTGGTCACTaGGCATATCCAATGTTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LLQKHKDTGFIPSTYREGQLSGH*AYPMLL Trigger: TAGCAACATTGGATATGCCAAGTGACCAGATAGCTG...ACCTTCTCTGTAGGTGCTGGGGATGAAGCCTGTGTCCTTGTGTTTCTGCAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS-3UTR CAA 90 bp | GTAAAAGTGGACTGGGAATGGCTCCATGGTAAAGTGCCTGTTGCAGAAACACAAGGCAGCTTCTGCCGTTaGAGTTTCTTCCGTTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VKVDWEWLHGKVPVAETQGSFCR*SFFRFS Trigger: GCTGAAACGGAAGAAACTCAAACGGCAGAAGCTGCC...TTGTGTTTCTGCAACAGGCACTTTACCATGGAGCCATTCCCAGTCCACTTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS CCA 90 bp | CTTCTTTGGGTAGCAATGAGTCAGTCTTCAGTAGTAAACCTTCACTaGTTGAACTACGAAGGAAGGCACGGACCACAAACGGACCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LLWVAMSQSSVVNLH*LNYEGRHGPQTDPD Trigger: ATCTGGGTCCGTTTGTGGTCCGTGCCTTCCTTCGTAGTTCAACCAGTGAAGGTTTACTACTGAAGACTGACTCATTGCTACCCAAAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS-3UTR CAA 90 bp | GCACCCAAATGGTGGCCCTTAACCATCTGTAACTCCAGCTCTAGGGCATCAGGACTCATTTATAACTGCTaGAAGATTGGCAGCTATCTG | + |
|
Preference number: 5 (lower is better) Translates to: APKWWPLTICNSSSRASGLIYNC*KIGSYL Trigger: CAGATAGCTGCCAATCTTCAAGCAGTTATAAATGAG...TCCTGATGCCCTAGAGCTGGAGTTACAGATGGTTAAGGGCCACCATTTGGGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTGGAGGTCAGAGGTGCTTACAGTTGGTTCTCCCCAGAAGGAAGTAAACTCCTTACTGTTGCTATTTaGGTGCTGAGGAAGTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ALEVRGAYSWFSPEGSKLLTVAI*VLRKFC Trigger: ACAGAACTTCCTCAGCACCAAAATAGCAACAGTAAG...GAGTTTACTTCCTTCTGGGGAGAACCAACTGTAAGCACCTCTGACCTCCAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121477.2 |
||
| CDS-3UTR CAA 90 bp | GCTCTGGAGGTCAGAGGTGCTTACAGTTGGTTCTCCCCAGAAGGAAGTAAACTCGTCAAGATAAACACCTaGCTTTGGATTGGTAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: ALEVRGAYSWFSPEGSKLVKINT*LWIGKV Trigger: GACTTTACCAATCCAAAGCAAGGTGTTTATCTTGAC...GAGTTTACTTCCTTCTGGGGAGAACCAACTGTAAGCACCTCTGACCTCCAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121477.2 |
||
| CDS-3UTR CAA 90 bp | AAGGAAGTAAACTCCCAAGTACCACTAAACCTGGTGAGCTCCACTGAGGAAGAAAACACAGCAACCTTGTaGACTTCTGAGGAGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KEVNSQVPLNLVSSTEEENTATL*TSEEKR Trigger: CCTCTTCTCCTCAGAAGTCAACAAGGTTGCTGTGTT...TTCTTCCTCAGTGGAGCTCACCAGGTTTAGTGGTACTTGGGAGTTTACTTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121477.2 |
||
| CDS-3UTR CAA 90 bp | TGTTCCTTCAGATGGCCATGTCTCCTCAAGGAATGTCACAAAACGAGAAACTGCGTAAACCTTCACTGGTaGAACTACGAAGGAAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: CSFRWPCLLKECHKTRNCVNLHW*NYEGRH Trigger: GTGCCTTCCTTCGTAGTTCAACCAGTGAAGGTTTAC...GCAGTTTCTCGTTTTGTGACATTCCTTGAGGAGACATGGCCATCTGAAGGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
||
| CDS GCA 90 bp | CGGACCCAGATTCAGTGGTCTGTGCTTACAGACCTCATTTATAACTaGTTGAAGATTGGCAGCTATCTGGTCACTTGGCATATCCAATGT | + |
|
Preference number: 5 (lower is better) Translates to: RTQIQWSVLTDLIYN*LKIGSYLVTWHIQC Trigger: ACATTGGATATGCCAAGTGACCAGATAGCTGCCAATCTTCAAGCAGTTATAAATGAGGTCTGTAAGCACAGACCACTGAATCTGGGTCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| CDS TCA 90 bp | CCCAGATTCAGTGGTCTGTGCTTACAGACCTCATTTATAACTGCTTaGAGATTGGCAGCTATCTGGTCACTTGGCATATCCAATGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: PRFSGLCLQTSFITA*RLAAIWSLGISNVA Trigger: AGCAACATTGGATATGCCAAGTGACCAGATAGCTGCCAATCTTCAAGCAGTTATAAATGAGGTCTGTAAGCACAGACCACTGAATCTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| CDS-3UTR CAA 90 bp | GTAAAAGTGGACTGGGAATGGCTCCATGGTAAAGTGCCTGTTGCAGAAACACAAGTAGTTTTAGCTTCTTaGGGTAGCAATGAGTCAGTC | + |
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Preference number: 5 (lower is better) Translates to: VKVDWEWLHGKVPVAETQVVLAS*GSNESV Trigger: GACTGACTCATTGCTACCCAAAGAAGCTAAAACTAC...TTGTGTTTCTGCAACAGGCACTTTACCATGGAGCCATTCCCAGTCCACTTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| CDS GCA 90 bp | ATGTCTGTTGTGCAAGAGACTGTTCACAGAACAAGGGTAAAGAGATaGCTGGGAAGCCATCTTGCAAAGACAATGCCTTTGATGATGTAT | + |
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Preference number: 5 (lower is better) Translates to: MSVVQETVHRTRVKR*LGSHLAKTMPLMMY Trigger: ATACATCATCAAAGGCATTGTCTTTGCAAGATGGCTTCCCAGGCATCTCTTTACCCTTGTTCTGTGAACAGTCTCTTGCACAACAGACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 ENSMUST00000121477.2 |
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| CDS-3UTR CAA 90 bp | AAGGAAGTAAACTCCCAAGTACCACTAAACCTGGTGAGCTCCACTGAGGAAGAAGCAAAGACAATGCCTTaGATGATGTATCAAGACTCT | + |
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Preference number: 5 (lower is better) Translates to: KEVNSQVPLNLVSSTEEEAKTMP*MMYQDS Trigger: AGAGTCTTGATACATCATCAAAGGCATTGTCTTTGC...TTCTTCCTCAGTGGAGCTCACCAGGTTTAGTGGTACTTGGGAGTTTACTTCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121477.2 |
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| CDS-3UTR CAA 90 bp | CCTTCAGATGGCCATGTCTCCTCAAGGAATGTCACAAAACGAGAAACTGCTTCTGTCAAGATAAACACCTaGCTTTGGATTGGTAAAGTC | + |
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Preference number: 5 (lower is better) Translates to: PSDGHVSSRNVTKRETASVKINT*LWIGKV Trigger: GACTTTACCAATCCAAAGCAAGGTGTTTATCTTGAC...AGAAGCAGTTTCTCGTTTTGTGACATTCCTTGAGGAGACATGGCCATCTGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| CDS-3UTR CAA 90 bp | AAGGAAGTAAACTCCCAAGTACCACTAAACCTGGTGAGCTCCACTGAGGAAGAAAATAATTCAAGCATTTaGGGGATGTCACGACCAATG | + |
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Preference number: 5 (lower is better) Translates to: KEVNSQVPLNLVSSTEEENNSSI*GMSRPM Trigger: CATTGGTCGTGACATCCCCAAAATGCTTGAATTATT...TTCTTCCTCAGTGGAGCTCACCAGGTTTAGTGGTACTTGGGAGTTTACTTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121477.2 |
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| CDS-3UTR CAA 90 bp | CATGTCTCCTCAAGGAATGTCACAAAACGAGAAACTGCTTCTAGACTTGGGATTCAGCTATCTGGTCACTaGGCATATCCAATGTTGCTA | + |
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Preference number: 5 (lower is better) Translates to: HVSSRNVTKRETASRLGIQLSGH*AYPMLL Trigger: TAGCAACATTGGATATGCCAAGTGACCAGATAGCTG...AATCCCAAGTCTAGAAGCAGTTTCTCGTTTTGTGACATTCCTTGAGGAGACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| CDS-3UTR CAA 90 bp | GATGGCCATGTCTCCTCAAGGAATGTCACAAAACGAGAAACTGCTTCTAGACTTGTAGTTTTAGCTTCTTaGGGTAGCAATGAGTCAGTC | + |
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Preference number: 5 (lower is better) Translates to: DGHVSSRNVTKRETASRLVVLAS*GSNESV Trigger: GACTGACTCATTGCTACCCAAAGAAGCTAAAACTAC...AAGTCTAGAAGCAGTTTCTCGTTTTGTGACATTCCTTGAGGAGACATGGCCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| CDS CCA 90 bp | GACCTCATTTATAACTGCTTGAAGATTGGCAGCTATCTGGTCACTTaGCATATCCAATGTTGCTATTTTGGTGCTGAGGAAGTTCTGTCT | + |
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Preference number: 5 (lower is better) Translates to: DLIYNCLKIGSYLVT*HIQCCYFGAEEVLS Trigger: AGACAGAACTTCCTCAGCACCAAAATAGCAACATTGGATATGCCAAGTGACCAGATAGCTGCCAATCTTCAAGCAGTTATAAATGAGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| CDS-3UTR CAA 90 bp | GGAGAAAAATTGGCAAATAAAGCAATAGCTTTGGGCCCTTGCCTAGCATGCACAGTCAAGATAAACACCTaGCTTTGGATTGGTAAAGTC | + |
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Preference number: 5 (lower is better) Translates to: GEKLANKAIALGPCLACTVKINT*LWIGKV Trigger: GACTTTACCAATCCAAAGCAAGGTGTTTATCTTGAC...TGTGCATGCTAGGCAAGGGCCCAAAGCTATTGCTTTATTTGCCAATTTTTCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| CDS-3UTR CAA 90 bp | GATGGCCATGTCTCCTCAAGGAATGTCACAAAACGAGAAACTGCTTCTAGACTTCTCATTTATAACTGCTaGAAGATTGGCAGCTATCTG | + |
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Preference number: 5 (lower is better) Translates to: DGHVSSRNVTKRETASRLLIYNC*KIGSYL Trigger: CAGATAGCTGCCAATCTTCAAGCAGTTATAAATGAG...AAGTCTAGAAGCAGTTTCTCGTTTTGTGACATTCCTTGAGGAGACATGGCCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| CDS-3UTR CAA 90 bp | CATGTCTCCTCAAGGAATGTCACAAAACGAGAAACTGCTTCTAGACTTGGGATTGCAAAGACAATGCCTTaGATGATGTATCAAGACTCT | + |
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Preference number: 5 (lower is better) Translates to: HVSSRNVTKRETASRLGIAKTMP*MMYQDS Trigger: AGAGTCTTGATACATCATCAAAGGCATTGTCTTTGC...AATCCCAAGTCTAGAAGCAGTTTCTCGTTTTGTGACATTCCTTGAGGAGACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| CDS CAA 90 bp | AGGGTAAAGAGATGCCTGGGAAGCCATCTTGCAAAGACAATGCCTTaGATGATGTATCAAGACTCTACGGAGGCACCTTACGGCCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: RVKRCLGSHLAKTMP*MMYQDSTEAPYGRR Trigger: GCGGCGGCCGTAAGGTGCCTCCGTAGAGTCTTGATACATCATCAAAGGCATTGTCTTTGCAAGATGGCTTCCCAGGCATCTCTTTACCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 ENSMUST00000121477.2 |
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| CDS CAA 72 bp | GCAATGAGTCAGTCTTCAGTAGTAAACCTTCACTGGTaGAACTACGAAGGAAGGCACGGACCACAAACGGAC | + |
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Preference number: 6 (lower is better) Translates to: AMSQSSVVNLHW*NYEGRHGPQTD Trigger: GTCCGTTTGTGGTCCGTGCCTTCCTTCGTAGTTCAACCAGTGAAGGTTTACTACTGAAGACTGACTCATTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| CDS CAA 90 bp | CTTTGGGTAGCAATGAGTCAGTCTTCAGTAGTAAACCTTCACTGGTaGAACTACGAAGGAAGGCACGGACCACAAACGGACCCAGATTCA | + |
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Preference number: 6 (lower is better) Translates to: LWVAMSQSSVVNLHW*NYEGRHGPQTDPDS Trigger: TGAATCTGGGTCCGTTTGTGGTCCGTGCCTTCCTTCGTAGTTCAACCAGTGAAGGTTTACTACTGAAGACTGACTCATTGCTACCCAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| CDS GCA 72 bp | GTGCAAGAGACTGTTCACAGAACAAGGGTAAAGAGATaGCTGGGAAGCCATCTTGCAAAGACAATGCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: VQETVHRTRVKR*LGSHLAKTMPL Trigger: CAAAGGCATTGTCTTTGCAAGATGGCTTCCCAGGCATCTCTTTACCCTTGTTCTGTGAACAGTCTCTTGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 ENSMUST00000121477.2 |
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| CDS CCA 72 bp | GTAGCAATGAGTCAGTCTTCAGTAGTAAACCTTCACTaGTTGAACTACGAAGGAAGGCACGGACCACAAACG | + |
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Preference number: 6 (lower is better) Translates to: VAMSQSSVVNLH*LNYEGRHGPQT Trigger: CGTTTGTGGTCCGTGCCTTCCTTCGTAGTTCAACCAGTGAAGGTTTACTACTGAAGACTGACTCATTGCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| CDS CAA 72 bp | AGATGCCTGGGAAGCCATCTTGCAAAGACAATGCCTTaGATGATGTATCAAGACTCTACGGAGGCACCTTAC | + |
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Preference number: 6 (lower is better) Translates to: RCLGSHLAKTMP*MMYQDSTEAPY Trigger: GTAAGGTGCCTCCGTAGAGTCTTGATACATCATCAAAGGCATTGTCTTTGCAAGATGGCTTCCCAGGCATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 ENSMUST00000121477.2 |
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| CDS CAA 90 bp | ACCCAGATTCAGTGGTCTGTGCTTACAGACCTCATTTATAACTGCTaGAAGATTGGCAGCTATCTGGTCACTTGGCATATCCAATGTTGC | + |
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Preference number: 6 (lower is better) Translates to: TQIQWSVLTDLIYNC*KIGSYLVTWHIQCC Trigger: GCAACATTGGATATGCCAAGTGACCAGATAGCTGCCAATCTTCAAGCAGTTATAAATGAGGTCTGTAAGCACAGACCACTGAATCTGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| CDS GCA 72 bp | GGCATCTGCACAAGGGATGCAGCTATAACTTACTGTTaGTATTTTGGTGCTGAGGAAGTTCTGTCTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: GICTRDAAITYC*YFGAEEVLSFF Trigger: GAAGAAAGACAGAACTTCCTCAGCACCAAAATAGCAACAGTAAGTTATAGCTGCATCCCTTGTGCAGATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121477.2 |
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| CDS GCA 72 bp | ATTCAGTGGTCTGTGCTTACAGACCTCATTTATAACTaGTTGAAGATTGGCAGCTATCTGGTCACTTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: IQWSVLTDLIYN*LKIGSYLVTWH Trigger: ATGCCAAGTGACCAGATAGCTGCCAATCTTCAAGCAGTTATAAATGAGGTCTGTAAGCACAGACCACTGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| CDS CCA 72 bp | TATAACTGCTTGAAGATTGGCAGCTATCTGGTCACTTaGCATATCCAATGTTGCTATTTTGGTGCTGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: YNCLKIGSYLVT*HIQCCYFGAEE Trigger: TTCCTCAGCACCAAAATAGCAACATTGGATATGCCAAGTGACCAGATAGCTGCCAATCTTCAAGCAGTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 |
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| CDS CAA 90 bp | TCATCTACCATAATTTCATGTGCCGTTTTAAATAATTCAAGCATTTaGGGGATGTCACGACCAATGGAATTTCTAGTAGCCTTTGGAAAT | + |
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Preference number: 6 (lower is better) Translates to: SSTIISCAVLNNSSI*GMSRPMEFLVAFGN Trigger: ATTTCCAAAGGCTACTAGAAATTCCATTGGTCGTGACATCCCCAAAATGCTTGAATTATTTAAAACGGCACATGAAATTATGGTAGATGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036437.13 ENSMUST00000117766.8 ENSMUST00000121477.2 |
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