Pregenerated sensors for MROH9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071890Ensembl transcript IDs: ENSMUST00000096608.5
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AAAGGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCAATGTGCACAGGGCCTaGGATGCCGCCACAGGCATC | + |
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Preference number: 4 (lower is better) Translates to: KGFKYRLRLLRGKGHVILNVHRA*DAATGI Trigger: GATGCCTGTGGCGGCATCTCAGGCCCTGTGCACATT...GAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR GCA 90 bp | AAAGGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCCAAGTCACAGAGGACTaGAGAGTCTGGAGGCGGGTC | + |
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Preference number: 4 (lower is better) Translates to: KGFKYRLRLLRGKGHVILQVTED*RVWRRV Trigger: GACCCGCCTCCAGACTCTGCAGTCCTCTGTGACTTG...GAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR GCA 90 bp | GGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCTTTGCACAGGGCCTGAGATaGCGCCACAGGCATCATGTT | + |
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Preference number: 4 (lower is better) Translates to: GFKYRLRLLRGKGHVILFAQGLR*RHRHHV Trigger: AACATGATGCCTGTGGCGGCATCTCAGGCCCTGTGC...AAAGAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR TCA 90 bp | AAAGGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCCGCTCTTGCTGGTACTaGCTGTCCTCACTCATCCAA | + |
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Preference number: 4 (lower is better) Translates to: KGFKYRLRLLRGKGHVILRSCWY*LSSLIQ Trigger: TTGGATGAGTGAGGACAGTCAGTACCAGCAAGAGCG...GAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR GCA 90 bp | AAAGGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCTCACAGGTAGAAATGTaGACAGGGCCTGAGATGCCG | + |
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Preference number: 4 (lower is better) Translates to: KGFKYRLRLLRGKGHVILSQVEM*TGPEMP Trigger: CGGCATCTCAGGCCCTGTGCACATTTCTACCTGTGA...GAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR CCA 90 bp | AAAGGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCGAGGACTGCAGAGTCTaGAGGCGGGTCATTGTGTTT | + |
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Preference number: 4 (lower is better) Translates to: KGFKYRLRLLRGKGHVILEDCRV*RRVIVF Trigger: AAACACAATGACCCGCCTCCAGACTCTGCAGTCCTC...GAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR CCA 90 bp | GGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCTTTCCACAGGCATCATGTTaGTGGCATCGAGGGAGAAAC | + |
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Preference number: 4 (lower is better) Translates to: GFKYRLRLLRGKGHVILFPQASC*WHRGRN Trigger: GTTTCTCCCTCGATGCCACCAACATGATGCCTGTGG...AAAGAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR TCA 90 bp | AAAGGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCGACGATACTGTCTTCTaGCCTTCTAGGACCTTCTAC | + |
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Preference number: 4 (lower is better) Translates to: KGFKYRLRLLRGKGHVILDDTVF*PSRTFY Trigger: GTAGAAGGTCCTAGAAGGTCAGAAGACAGTATCGTC...GAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR GCA 90 bp | AAAGGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCAGAGGTCCGTCCCATTaGTTTCACTGTGCTAAGACT | + |
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Preference number: 4 (lower is better) Translates to: KGFKYRLRLLRGKGHVILRGPSH*FHCAKT Trigger: AGTCTTAGCACAGTGAAAGCAATGGGACGGACCTCT...GAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR GCA 90 bp | GGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCTTTTGGGGCAGTAATATTTaGCCCACACTCTGGGCAATT | + |
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Preference number: 4 (lower is better) Translates to: GFKYRLRLLRGKGHVILFWGSNI*PTLWAI Trigger: AATTGCCCAGAGTGTGGGGCAAATATTACTGCCCCA...AAAGAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR GCA 90 bp | GGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCTTTTCCATACTTGCTGCTTaGCACAGCAGTAGCAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: GFKYRLRLLRGKGHVILFSILAA*HSSSRV Trigger: AACTCTGCTACTGCTGTGGCAAGCAGCAAGTATGGA...AAAGAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR GCA 90 bp | GGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCTTTTTTGCGGGTTTTCTCTaGCAACTCCTTGATCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: GFKYRLRLLRGKGHVILFFAGFL*QLLDQS Trigger: GCTCTGATCAAGGAGTTGGCAGAGAAAACCCGCAAA...AAAGAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCC 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR CCA 90 bp | GGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCTTTCTCCTTGAGTCATCTTaGCTAGTGACTCAACACCAG | + |
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Preference number: 4 (lower is better) Translates to: GFKYRLRLLRGKGHVILFLLESS*LVTQHQ Trigger: CTGGTGTTGAGTCACTAGCCAAGATGACTCAAGGAG...AAAGAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR CCA 90 bp | GGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCTTTTTTGTCTGCAGGGACTaGGAACTCCATGAGCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: GFKYRLRLLRGKGHVILFFVCRD*ELHELK Trigger: TTTCAGCTCATGGAGTTCCCAGTCCCTGCAGACAAA...AAAGAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCC 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR TCA 90 bp | AAAGGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCTTGGTTTTCTCTCCTTaGGTCATCTTGGCTAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: KGFKYRLRLLRGKGHVILLVFSP*VILASD Trigger: GTCACTAGCCAAGATGACTCAAGGAGAGAAAACCAA...GAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR GCA 90 bp | AAAGGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCGGATGCCGCCTCAATTaGCATTTTGTTGTTAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: KGFKYRLRLLRGKGHVILGCRLN*HFVVRR Trigger: TCTCCTAACAACAAAATGGCAATTGAGGCGGCATCC...GAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR GCA 90 bp | GGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCTTTAACACGCTGATAACGTaGAGCATGACACTCTTCATC | + |
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Preference number: 4 (lower is better) Translates to: GFKYRLRLLRGKGHVILFNTLIT*SMTLFI Trigger: GATGAAGAGTGTCATGCTGCACGTTATCAGCGTGTT...AAAGAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR GCA 90 bp | AAAGGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCTTCACTGAAAACTGGTaGCATGCTGGCAATCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: KGFKYRLRLLRGKGHVILFTENW*HAGNLL Trigger: CAGAAGATTGCCAGCATGGCACCAGTTTTCAGTGAA...GAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR GCA 90 bp | AAAGGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCCTGGGAGTAAGAGGTTaGACACACTCTCTATTTCAC | + |
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Preference number: 4 (lower is better) Translates to: KGFKYRLRLLRGKGHVILLGVRG*THSLFH Trigger: GTGAAATAGAGAGTGTGTGCAACCTCTTACTCCCAG...GAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR CCA 90 bp | GGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCTTTGCTTTAAACTCCACATaGTACCAAGTCACAGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: GFKYRLRLLRGKGHVILFALNST*YQVTED Trigger: GTCCTCTGTGACTTGGTACCATGTGGAGTTTAAAGC...AAAGAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR CCA 90 bp | AAAGGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCATTTCTGGGTCATTATaGGAACAGAAGAGGGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: KGFKYRLRLLRGKGHVILISGSL*EQKRES Trigger: GCTCTCCCTCTTCTGTTCCCATAATGACCCAGAAAT...GAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR CCA 90 bp | AAAGGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCAAGTCAGTCAGCAATTaGGGCAGTAATATTTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: KGFKYRLRLLRGKGHVILKSVSN*GSNICP Trigger: GGGGCAAATATTACTGCCCCAATTGCTGACTGACTT...GAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR TCA 90 bp | AAAGGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCCCATTGCTTGTTGTATaGTTTCTGGGTCATTATGGG | + |
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Preference number: 4 (lower is better) Translates to: KGFKYRLRLLRGKGHVILPLLVV*FLGHYG Trigger: CCCATAATGACCCAGAAATCATACAACAAGCAATGG...GAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR GCA 90 bp | GGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCTTTCGGATGATGACAGTGTaGTCTTTTGAAAGAAAAGCG | + |
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Preference number: 4 (lower is better) Translates to: GFKYRLRLLRGKGHVILFRMMTV*SFERKA Trigger: CGCTTTTCTTTCAAAAGAGCACACTGTCATCATCCG...AAAGAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR CCA 90 bp | AAAGGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCGGTCTCTGGAAACTGTaGAAAGTTACATTCACTGAG | + |
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Preference number: 4 (lower is better) Translates to: KGFKYRLRLLRGKGHVILGLWKL*KVTFTE Trigger: CTCAGTGAATGTAACTTTCCACAGTTTCCAGAGACC...GAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR GCA 90 bp | AAAGGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCTCTAGGACCTTCTACTaGGATCTTGTAGACATAATG | + |
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Preference number: 4 (lower is better) Translates to: KGFKYRLRLLRGKGHVILSRTFY*DLVDIM Trigger: CATTATGTCTACAAGATCGCAGTAGAAGGTCCTAGA...GAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR CCA 90 bp | AAAGGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCGAGGATCTACAAAACTaGAGTTCATGGCCAAGATTA | + |
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Preference number: 4 (lower is better) Translates to: KGFKYRLRLLRGKGHVILEDLQN*SSWPRL Trigger: TAATCTTGGCCATGAACTCCAGTTTTGTAGATCCTC...GAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR CCA 90 bp | AAAGGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCCACTGTGCTAAGACTTaGCATGGAAAATACCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: KGFKYRLRLLRGKGHVILHCAKT*HGKYLS Trigger: AGAAAGGTATTTTCCATGCCAAGTCTTAGCACAGTG...GAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR CCA 90 bp | AAAGGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCCCTCACTCATCCAAGTaGCCATTTCCTTTAAGATTT | + |
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Preference number: 4 (lower is better) Translates to: KGFKYRLRLLRGKGHVILPHSSK*PFPLRF Trigger: AAATCTTAAAGGAAATGGCCACTTGGATGAGTGAGG...GAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR CCA 90 bp | AAAGGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCTATTTCACTGAAAACTaGTGCCATGCTGGCAATCTT | + |
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Preference number: 4 (lower is better) Translates to: KGFKYRLRLLRGKGHVILYFTEN*CHAGNL Trigger: AAGATTGCCAGCATGGCACCAGTTTTCAGTGAAATA...GAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR TCA 90 bp | GGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCTTTGATGTCGAGAACTACTaGCTCAAAATTGTAAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: GFKYRLRLLRGKGHVILFDVENY*LKIVSF Trigger: GAAACTTACAATTTTGAGTCAGTAGTTCTCGACATC...AAAGAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR TCA 90 bp | AAAGGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCTGTCAATTTCATCTCTaGGTAGTAAATGTTCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: KGFKYRLRLLRGKGHVILCQFHL*VVNVLL Trigger: CAGGAGAACATTTACTACTCAGAGATGAAATTGACA...GAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCCTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR GCA 90 bp | GGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCTTTTCTGAAGACTCATTTTaGCAACTGAAGGATTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: GFKYRLRLLRGKGHVILFSEDSF*QLKDWN Trigger: ATTCCAATCCTTCAGTTGGCAAAATGAGTCTTCAGA...AAAGAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR CCA 90 bp | AAAGGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCTCATGGCCAAGATTATaGATTGTTCACTTAACAGAC | + |
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Preference number: 4 (lower is better) Translates to: KGFKYRLRLLRGKGHVILSWPRL*IVHLTD Trigger: GTCTGTTAAGTGAACAATCCATAATCTTGGCCATGA...GAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCCTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR GCA 90 bp | AAAGGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCAATTGTGATTCAAACTaGACCAGAGGATCTACAAAA | + |
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Preference number: 4 (lower is better) Translates to: KGFKYRLRLLRGKGHVILNCDSN*TRGSTK Trigger: TTTTGTAGATCCTCTGGTGCAGTTTGAATCACAATT...GAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR GCA 90 bp | GGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCTTTGATAGCTCTATTATCTaGAATTGTGATTCAAACTGC | + |
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Preference number: 4 (lower is better) Translates to: GFKYRLRLLRGKGHVILFDSSII*NCDSNC Trigger: GCAGTTTGAATCACAATTGCAGATAATAGAGCTATC...AAAGAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR CCA 90 bp | AAAGGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCTTGTTGTATGATTTCTaGGTCATTATGGGAACAGAA | + |
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Preference number: 4 (lower is better) Translates to: KGFKYRLRLLRGKGHVILLLYDF*VIMGTE Trigger: TTCTGTTCCCATAATGACCCAGAAATCATACAACAA...GAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCCTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS GCA 90 bp | AAGATGACCTTCTTCGGGGAAGCACGTGTTAACACGCTGATAACGTaGAGCATGACACTCTTCATCATGGGGGAAGGATTCCCACAGAGC | + |
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Preference number: 5 (lower is better) Translates to: KMTFFGEARVNTLIT*SMTLFIMGEGFPQS Trigger: GCTCTGTGGGAATCCTTCCCCCATGATGAAGAGTGTCATGCTGCACGTTATCAGCGTGTTAACACGTGCTTCCCCGAAGAAGGTCATCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS TCA 90 bp | AGCAGTAGCAGAGTTTTGTCTGCAGGGACTGGGAACTCCATGAGCTaGAAGATGACCTTCTTCGGGGAAGCACGTGTTAACACGCTGATA | + |
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Preference number: 5 (lower is better) Translates to: SSSRVLSAGTGNSMS*KMTFFGEARVNTLI Trigger: TATCAGCGTGTTAACACGTGCTTCCCCGAAGAAGGTCATCTTTCAGCTCATGGAGTTCCCAGTCCCTGCAGACAAAACTCTGCTACTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS TCA 90 bp | AGGCGATGTAGAGGACGTAATTCATCCCTGCCATTGCTTGTTGTATaGTTTCTGGGTCATTATGGGAACAGAAGAGGGAGAGCTCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: RRCRGRNSSLPLLVV*FLGHYGNRRGRALQ Trigger: CTGCAGAGCTCTCCCTCTTCTGTTCCCATAATGACCCAGAAATCATACAACAAGCAATGGCAGGGATGAATTACGTCCTCTACATCGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS CCA 90 bp | AGACCTGAGTATGTATCCAATAGGATTTCGGCTTTAAACTCCACATaGTACCAAGTCACAGAGGACTGCAGAGTCTGGAGGCGGGTCATT | + |
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Preference number: 5 (lower is better) Translates to: RPEYVSNRISALNST*YQVTEDCRVWRRVI Trigger: AATGACCCGCCTCCAGACTCTGCAGTCCTCTGTGACTTGGTACCATGTGGAGTTTAAAGCCGAAATCCTATTGGATACATACTCAGGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS TCA 90 bp | ATTAATACCCTGGTGATAACCATCATTGCTCGCTCTTGCTGGTACTaGCTGTCCTCACTCATCCAAGTGGCCATTTCCTTTAAGATTTGT | + |
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Preference number: 5 (lower is better) Translates to: INTLVITIIARSCWY*LSSLIQVAISFKIC Trigger: ACAAATCTTAAAGGAAATGGCCACTTGGATGAGTGAGGACAGTCAGTACCAGCAAGAGCGAGCAATGATGGTTATCACCAGGGTATTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR CAA 90 bp | GGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCTTTAGCAGTAGCAGAGTTTaGTCTGCAGGGACTGGGAAC | + |
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Preference number: 5 (lower is better) Translates to: GFKYRLRLLRGKGHVILFSSSRV*SAGTGN Trigger: GTTCCCAGTCCCTGCAGACAAAACTCTGCTACTGCT...AAAGAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR CAA 90 bp | GGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCTTTGTCATAACCTTGATGTaGCTTCCTTCCTCACTCGGC | + |
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Preference number: 5 (lower is better) Translates to: GFKYRLRLLRGKGHVILFVITLM*LPSSLG Trigger: GCCGAGTGAGGAAGGAAGCAACATCAAGGTTATGAC...AAAGAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR CAA 90 bp | AAAGGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCCACTTGACTCCATACTaGCTGCTTGCCACAGCAGTA | + |
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Preference number: 5 (lower is better) Translates to: KGFKYRLRLLRGKGHVILHLTPY*LLATAV Trigger: TACTGCTGTGGCAAGCAGCAAGTATGGAGTCAAGTG...GAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR CAA 90 bp | GGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCTTTACTACAGTAGGAGAGTaGAAGCAAGAGGGCCATCAG | + |
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Preference number: 5 (lower is better) Translates to: GFKYRLRLLRGKGHVILFTTVGE*KQEGHQ Trigger: CTGATGGCCCTCTTGCTTCAACTCTCCTACTGTAGT...AAAGAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS TCA 90 bp | AACTGGTGCCATGCTGGCAATCTTCTGAAGACTCATTTTGCCAACTaGAGGATTGGAATCATTAATCCAGTTTCTGAAGAGGACCAAAAA | + |
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Preference number: 5 (lower is better) Translates to: NWCHAGNLLKTHFAN*RIGIINPVSEEDQK Trigger: TTTTTGGTCCTCTTCAGAAACTGGATTAATGATTCCAATCCTTCAGTTGGCAAAATGAGTCTTCAGAAGATTGCCAGCATGGCACCAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR CAA 90 bp | GGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCTTTCATCCCTGCCATTGCTaGTTGTATGATTTCTGGGTC | + |
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Preference number: 5 (lower is better) Translates to: GFKYRLRLLRGKGHVILFHPCHC*LYDFWV Trigger: GACCCAGAAATCATACAACAAGCAATGGCAGGGATG...AAAGAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR CAA 90 bp | GGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCTTTCCAGACGTCATAACCTaGATGTTGCTTCCTTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: GFKYRLRLLRGKGHVILFPDVIT*MLLPSS Trigger: TGAGGAAGGAAGCAACATCAAGGTTATGACGTCTGG...AAAGAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS CCA 90 bp | TTATCTGCAATTGTGATTCAAACTGCACCAGAGGATCTACAAAACTaGAGTTCATGGCCAAGATTATGGATTGTTCACTTAACAGACCTG | + |
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Preference number: 5 (lower is better) Translates to: LSAIVIQTAPEDLQN*SSWPRLWIVHLTDL Trigger: CAGGTCTGTTAAGTGAACAATCCATAATCTTGGCCATGAACTCCAGTTTTGTAGATCCTCTGGTGCAGTTTGAATCACAATTGCAGATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR CAA 90 bp | GGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCTTTCCCTGCCATTGCTTGTaGTATGATTTCTGGGTCATT | + |
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Preference number: 5 (lower is better) Translates to: GFKYRLRLLRGKGHVILFPCHCL*YDFWVI Trigger: AATGACCCAGAAATCATACAACAAGCAATGGCAGGG...AAAGAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR CAA 90 bp | AAAGGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCACTGGGAGTAAGAGGTaGCACACACTCTCTATTTCA | + |
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Preference number: 5 (lower is better) Translates to: KGFKYRLRLLRGKGHVILTGSKR*HTLSIS Trigger: TGAAATAGAGAGTGTGTGCAACCTCTTACTCCCAGT...GAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS GCA 90 bp | ACCTTTCTGAAAGATAGCTCTATTATCTGCAATTGTGATTCAAACTaGACCAGAGGATCTACAAAACTGGAGTTCATGGCCAAGATTATG | + |
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Preference number: 5 (lower is better) Translates to: TFLKDSSIICNCDSN*TRGSTKLEFMAKIM Trigger: CATAATCTTGGCCATGAACTCCAGTTTTGTAGATCCTCTGGTGCAGTTTGAATCACAATTGCAGATAATAGAGCTATCTTTCAGAAAGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR CAA 90 bp | AAAGGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCTATTTCTTGACCCTCTaGGATGCAAAGATTAATACC | + |
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Preference number: 5 (lower is better) Translates to: KGFKYRLRLLRGKGHVILYFLTL*DAKINT Trigger: GGTATTAATCTTTGCATCCAAGAGGGTCAAGAAATA...GAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCCTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR CAA 90 bp | GGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCTTTTTAGTATCAACAAGATaGTCTTCAGCACTTCAGATG | + |
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Preference number: 5 (lower is better) Translates to: GFKYRLRLLRGKGHVILFLVSTR*SSALQM Trigger: CATCTGAAGTGCTGAAGACAATCTTGTTGATACTAA...AAAGAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR CAA 90 bp | GGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCTTTTTGCCAACTGAAGGATaGGAATCATTAATCCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: GFKYRLRLLRGKGHVILFLPTEG*ESLIQF Trigger: AAACTGGATTAATGATTCCAATCCTTCAGTTGGCAA...AAAGAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS-3UTR CAA 90 bp | AAAGGATTTAAATACAGACTGAGGTTATTAAGAGGCAAGGGACATGTGATTCTCATTTCTTTAAAAAGTTaGCGGGTTTTCTCTGCCAAC | + |
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Preference number: 5 (lower is better) Translates to: KGFKYRLRLLRGKGHVILISLKS*RVFSAN Trigger: GTTGGCAGAGAAAACCCGCAAACTTTTTAAAGAAAT...GAGAATCACATGTCCCTTGCCTCTTAATAACCTCAGTCTGTATTTAAATCCTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS GCA 72 bp | CTCCAGGTCCTCAGTGTCCTCAGAGGTCCGTCCCATTaGTTTCACTGTGCTAAGACTTGGCATGGAAAATAC | + |
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Preference number: 6 (lower is better) Translates to: LQVLSVLRGPSH*FHCAKTWHGKY Trigger: GTATTTTCCATGCCAAGTCTTAGCACAGTGAAAGCAATGGGACGGACCTCTGAGGACACTGAGGACCTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS GCA 72 bp | CCACCACTTTCTCATAAGAAGTCACAGGTAGAAATGTaGACAGGGCCTGAGATGCCGCCACAGGCATCATGT | + |
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Preference number: 6 (lower is better) Translates to: PPLSHKKSQVEM*TGPEMPPQASC Trigger: ACATGATGCCTGTGGCGGCATCTCAGGCCCTGTGCACATTTCTACCTGTGACTTCTTATGAGAAAGTGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS TCA 72 bp | AGAGTTTTGTCTGCAGGGACTGGGAACTCCATGAGCTaGAAGATGACCTTCTTCGGGGAAGCACGTGTTAAC | + |
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Preference number: 6 (lower is better) Translates to: RVLSAGTGNSMS*KMTFFGEARVN Trigger: GTTAACACGTGCTTCCCCGAAGAAGGTCATCTTTCAGCTCATGGAGTTCCCAGTCCCTGCAGACAAAACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS GCA 72 bp | TTCTTCGGGGAAGCACGTGTTAACACGCTGATAACGTaGAGCATGACACTCTTCATCATGGGGGAAGGATTC | + |
|
Preference number: 6 (lower is better) Translates to: FFGEARVNTLIT*SMTLFIMGEGF Trigger: GAATCCTTCCCCCATGATGAAGAGTGTCATGCTGCACGTTATCAGCGTGTTAACACGTGCTTCCCCGAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS TCA 72 bp | CTGGTGATAACCATCATTGCTCGCTCTTGCTGGTACTaGCTGTCCTCACTCATCCAAGTGGCCATTTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: LVITIIARSCWY*LSSLIQVAISF Trigger: AAAGGAAATGGCCACTTGGATGAGTGAGGACAGTCAGTACCAGCAAGAGCGAGCAATGATGGTTATCACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS GCA 72 bp | GCTTTAAACTCCACATGGTACCAAGTCACAGAGGACTaGAGAGTCTGGAGGCGGGTCATTGTGTTTGTAGTT | + |
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Preference number: 6 (lower is better) Translates to: ALNSTWYQVTED*RVWRRVIVFVV Trigger: AACTACAAACACAATGACCCGCCTCCAGACTCTGCAGTCCTCTGTGACTTGGTACCATGTGGAGTTTAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS GCA 72 bp | ACTTCAGATGCAACACTTGACTCCATACTTGCTGCTTaGCACAGCAGTAGCAGAGTTTTGTCTGCAGGGACT | + |
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Preference number: 6 (lower is better) Translates to: TSDATLDSILAA*HSSSRVLSAGT Trigger: AGTCCCTGCAGACAAAACTCTGCTACTGCTGTGGCAAGCAGCAAGTATGGAGTCAAGTGTTGCATCTGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS GCA 72 bp | TTTCGAAGGGTAAGCATGGCCCGGATGATGACAGTGTaGTCTTTTGAAAGAAAAGCGTCTAGGACTGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: FRRVSMARMMTV*SFERKASRTGS Trigger: ACTCCCAGTCCTAGACGCTTTTCTTTCAAAAGAGCACACTGTCATCATCCGGGCCATGCTTACCCTTCGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS CAA 90 bp | GCAGCCAGGAGACCTAAACACGGAGCATCGATACTCCGATATTTCTaGACCCTCTTGGATGCAAAGATTAATACCCTGGTGATAACCATC | + |
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Preference number: 6 (lower is better) Translates to: AARRPKHGASILRYF*TLLDAKINTLVITI Trigger: GATGGTTATCACCAGGGTATTAATCTTTGCATCCAAGAGGGTCAAGAAATATCGGAGTATCGATGCTCCGTGTTTAGGTCTCCTGGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS CAA 90 bp | CTGACACAAGGCGATGTAGAGGACGTAATTCATCCCTGCCATTGCTaGTTGTATGATTTCTGGGTCATTATGGGAACAGAAGAGGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: LTQGDVEDVIHPCHC*LYDFWVIMGTEEGE Trigger: CTCTCCCTCTTCTGTTCCCATAATGACCCAGAAATCATACAACAAGCAATGGCAGGGATGAATTACGTCCTCTACATCGCCTTGTGTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS TCA 72 bp | CTGGGAGTAAGAGGTTGCACACACTCTCTATTTCACTaGAAACTGGTGCCATGCTGGCAATCTTCTGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: LGVRGCTHSLFH*KLVPCWQSSED Trigger: GTCTTCAGAAGATTGCCAGCATGGCACCAGTTTTCAGTGAAATAGAGAGTGTGTGCAACCTCTTACTCCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS GCA 72 bp | GAGGTTGCACACACTCTCTATTTCACTGAAAACTGGTaGCATGCTGGCAATCTTCTGAAGACTCATTTTGCC | + |
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Preference number: 6 (lower is better) Translates to: EVAHTLYFTENW*HAGNLLKTHFA Trigger: GGCAAAATGAGTCTTCAGAAGATTGCCAGCATGGCACCAGTTTTCAGTGAAATAGAGAGTGTGTGCAACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS CCA 72 bp | TATGTATCCAATAGGATTTCGGCTTTAAACTCCACATaGTACCAAGTCACAGAGGACTGCAGAGTCTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: YVSNRISALNST*YQVTEDCRVWR Trigger: CCTCCAGACTCTGCAGTCCTCTGTGACTTGGTACCATGTGGAGTTTAAAGCCGAAATCCTATTGGATACATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS CCA 72 bp | GTAATTCATCCCTGCCATTGCTTGTTGTATGATTTCTaGGTCATTATGGGAACAGAAGAGGGAGAGCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: VIHPCHCLLYDF*VIMGTEEGELC Trigger: GCAGAGCTCTCCCTCTTCTGTTCCCATAATGACCCAGAAATCATACAACAAGCAATGGCAGGGATGAATTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS CCA 72 bp | TTTTTCAGGAGAGTCCACACAAAGTCAGTCAGCAATTaGGGCAGTAATATTTGCCCCACACTCTGGGCAATT | + |
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Preference number: 6 (lower is better) Translates to: FFRRVHTKSVSN*GSNICPTLWAI Trigger: AATTGCCCAGAGTGTGGGGCAAATATTACTGCCCCAATTGCTGACTGACTTTGTGTGGACTCTCCTGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS CAA 72 bp | ATCTTGGCTAGTGACTCAACACCAGACGTCATAACCTaGATGTTGCTTCCTTCCTCACTCGGCTTAGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: ILASDSTPDVIT*MLLPSSLGLED Trigger: ATCTTCTAAGCCGAGTGAGGAAGGAAGCAACATCAAGGTTATGACGTCTGGTGTTGAGTCACTAGCCAAGAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS CAA 72 bp | TCAACAAGATTGTCTTCAGCACTTCAGATGCAACACTaGACTCCATACTTGCTGCTTGCCACAGCAGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: STRLSSALQMQH*TPYLLLATAVA Trigger: TGCTACTGCTGTGGCAAGCAGCAAGTATGGAGTCAAGTGTTGCATCTGAAGTGCTGAAGACAATCTTGTTGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS GCA 72 bp | ATTGGCTATTTCTTTAAAAAGTTTGCGGGTTTTCTCTaGCAACTCCTTGATCAGAGCATCTTCCACCCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: IGYFFKKFAGFL*QLLDQSIFHPG Trigger: ACCCGGGTGGAAGATGCTCTGATCAAGGAGTTGGCAGAGAAAACCCGCAAACTTTTTAAAGAAATAGCCAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS CAA 72 bp | CACGGAGCATCGATACTCCGATATTTCTTGACCCTCTaGGATGCAAAGATTAATACCCTGGTGATAACCATC | + |
|
Preference number: 6 (lower is better) Translates to: HGASILRYFLTL*DAKINTLVITI Trigger: GATGGTTATCACCAGGGTATTAATCTTTGCATCCAAGAGGGTCAAGAAATATCGGAGTATCGATGCTCCGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS CAA 72 bp | AGACCTAAACACGGAGCATCGATACTCCGATATTTCTaGACCCTCTTGGATGCAAAGATTAATACCCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RPKHGASILRYF*TLLDAKINTLV Trigger: CACCAGGGTATTAATCTTTGCATCCAAGAGGGTCAAGAAATATCGGAGTATCGATGCTCCGTGTTTAGGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS CAA 72 bp | GGCGATGTAGAGGACGTAATTCATCCCTGCCATTGCTaGTTGTATGATTTCTGGGTCATTATGGGAACAGAA | + |
|
Preference number: 6 (lower is better) Translates to: GDVEDVIHPCHC*LYDFWVIMGTE Trigger: TTCTGTTCCCATAATGACCCAGAAATCATACAACAAGCAATGGCAGGGATGAATTACGTCCTCTACATCGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS CAA 72 bp | TTTGAAAGAAAAGCGTCTAGGACTGGGAGTAAGAGGTaGCACACACTCTCTATTTCACTGAAAACTGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: FERKASRTGSKR*HTLSISLKTGA Trigger: GGCACCAGTTTTCAGTGAAATAGAGAGTGTGTGCAACCTCTTACTCCCAGTCCTAGACGCTTTTCTTTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS CAA 90 bp | TTGGCTATTTCTTTAAAAAGTTTGCGGGTTTTCTCTGCCAACTCCTaGATCAGAGCATCTTCCACCCGGGTCAATCGTTCAATAACCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LAISLKSLRVFSANS*IRASSTRVNRSITS Trigger: TGAGGTTATTGAACGATTGACCCGGGTGGAAGATGCTCTGATCAAGGAGTTGGCAGAGAAAACCCGCAAACTTTTTAAAGAAATAGCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS CCA 72 bp | GCTCTTGCTGGTACTGACTGTCCTCACTCATCCAAGTaGCCATTTCCTTTAAGATTTGTATCTTGTAGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: ALAGTDCPHSSK*PFPLRFVSCRS Trigger: ACTTCTACAAGATACAAATCTTAAAGGAAATGGCCACTTGGATGAGTGAGGACAGTCAGTACCAGCAAGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS CAA 72 bp | GATGTAGAGGACGTAATTCATCCCTGCCATTGCTTGTaGTATGATTTCTGGGTCATTATGGGAACAGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: DVEDVIHPCHCL*YDFWVIMGTEE Trigger: CTCTTCTGTTCCCATAATGACCCAGAAATCATACAACAAGCAATGGCAGGGATGAATTACGTCCTCTACATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS CAA 90 bp | ACCCATTTCCGGAAGGTTTGTTTGATGGTTGAAGAGGACATTCGATaGGCTATTTCTTTAAAAAGTTTGCGGGTTTTCTCTGCCAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: THFRKVCLMVEEDIR*AISLKSLRVFSANS Trigger: GGAGTTGGCAGAGAAAACCCGCAAACTTTTTAAAGAAATAGCCAATCGAATGTCCTCTTCAACCATCAAACAAACCTTCCGGAAATGGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS TCA 72 bp | TTCAGCAAAGAATATTATGGTGACGATACTGTCTTCTaGCCTTCTAGGACCTTCTACTGCGATCTTGTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: FSKEYYGDDTVF*PSRTFYCDLVD Trigger: GTCTACAAGATCGCAGTAGAAGGTCCTAGAAGGTCAGAAGACAGTATCGTCACCATAATATTCTTTGCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS CAA 72 bp | GAAGAGGACATTCGATTGGCTATTTCTTTAAAAAGTTaGCGGGTTTTCTCTGCCAACTCCTTGATCAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: EEDIRLAISLKS*RVFSANSLIRA Trigger: TGCTCTGATCAAGGAGTTGGCAGAGAAAACCCGCAAACTTTTTAAAGAAATAGCCAATCGAATGTCCTCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS TCA 72 bp | CATGCTGGCAATCTTCTGAAGACTCATTTTGCCAACTaGAGGATTGGAATCATTAATCCAGTTTCTGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: HAGNLLKTHFAN*RIGIINPVSEE Trigger: CTCTTCAGAAACTGGATTAATGATTCCAATCCTTCAGTTGGCAAAATGAGTCTTCAGAAGATTGCCAGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS CCA 72 bp | ATTGTGATTCAAACTGCACCAGAGGATCTACAAAACTaGAGTTCATGGCCAAGATTATGGATTGTTCACTTA | + |
|
Preference number: 6 (lower is better) Translates to: IVIQTAPEDLQN*SSWPRLWIVHL Trigger: TAAGTGAACAATCCATAATCTTGGCCATGAACTCCAGTTTTGTAGATCCTCTGGTGCAGTTTGAATCACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS CAA 72 bp | CGGAAGGTTTGTTTGATGGTTGAAGAGGACATTCGATaGGCTATTTCTTTAAAAAGTTTGCGGGTTTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RKVCLMVEEDIR*AISLKSLRVFS Trigger: AGAGAAAACCCGCAAACTTTTTAAAGAAATAGCCAATCGAATGTCCTCTTCAACCATCAAACAAACCTTCCG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS CAA 90 bp | ATCCAGTTTCTGAAGAGGACCAAAAATTCTTCCGGTAATGATTCCTaGAAGAAGTTGTTCAGAAGTTCAGCAAAGAATATTATGGTGACG | + |
|
Preference number: 6 (lower is better) Translates to: IQFLKRTKNSSGNDS*KKLFRSSAKNIMVT Trigger: CGTCACCATAATATTCTTTGCTGAACTTCTGAACAACTTCTTCAAGGAATCATTACCGGAAGAATTTTTGGTCCTCTTCAGAAACTGGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS TCA 72 bp | AAAATTGTAAGTTTCCTCTTTGAGCAGAGATGCTGTTaGCCACTTCAGTTGTGTAACACAGATAGTCAATGT | + |
|
Preference number: 6 (lower is better) Translates to: KIVSFLFEQRCC*PLQLCNTDSQC Trigger: ACATTGACTATCTGTGTTACACAACTGAAGTGGTCAACAGCATCTCTGCTCAAAGAGGAAACTTACAATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS TCA 72 bp | CATCTTAACCCATTTCCGGAAGGTTTGTTTGATGGTTaGAGAGGACATTCGATTGGCTATTTCTTTAAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: HLNPFPEGLFDG*RGHSIGYFFKK Trigger: CTTTTTAAAGAAATAGCCAATCGAATGTCCTCTTCAACCATCAAACAAACCTTCCGGAAATGGGTTAAGATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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| CDS CAA 72 bp | ACCAAAAATTCTTCCGGTAATGATTCCTTGAAGAAGTaGTTCAGAAGTTCAGCAAAGAATATTATGGTGACG | + |
|
Preference number: 6 (lower is better) Translates to: TKNSSGNDSLKK*FRSSAKNIMVT Trigger: CGTCACCATAATATTCTTTGCTGAACTTCTGAACAACTTCTTCAAGGAATCATTACCGGAAGAATTTTTGGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096608.5 |
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