RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MROH6 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000098678

Ensembl transcript IDs: ENSMUST00000184858.2

Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GGGCTGCGTGTCTGGACCTGCGCCCGGGCAAGCAGCGCCACCTGCTaGGCAGACACGTGCGCTGCCGAGGAAACCGCAGACTCCGGGTCG +
Preference number: 5 (lower is better)
Translates to: GLRVWTCARASSATC*ADTCAAEETADSGS
Trigger: CGACCCGGAGTCTGCGGTTTCCTCGGCAGCGCACGTGTCTGCCCAGCAGGTGGCGCTGCTTGCCCGGGCGCAGGTCCAGACACGCAGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS GCA 90 bp TGGACCTGCGCCCGGGCAAGCAGCGCCACCTGCTGGGCAGACACGTaGGCTGCCGAGGAAACCGCAGACTCCGGGTCGCCCTGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: WTCARASSATCWADT*AAEETADSGSPCSC
Trigger: ACAGCTGCAGGGCGACCCGGAGTCTGCGGTTTCCTCGGCAGCGCACGTGTCTGCCCAGCAGGTGGCGCTGCTTGCCCGGGCGCAGGTCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS GCA 90 bp TGGCGGCGGATGAAGCGGAAGAGGTTGGGGCTGCGTGTCTGGACCTaGGCCCGGGCAAGCAGCGCCACCTGCTGGGCAGACACGTGCGCT +
Preference number: 5 (lower is better)
Translates to: WRRMKRKRLGLRVWT*ARASSATCWADTCA
Trigger: AGCGCACGTGTCTGCCCAGCAGGTGGCGCTGCTTGCCCGGGCGCAGGTCCAGACACGCAGCCCCAACCTCTTCCGCTTCATCCGCCGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS GCA 90 bp GGGGGTAGCGAACTGGGTAGCAGCGCACACACCACGTCCTGCGCATaGTCCAGAGCCAGTGCGCTCAGCACCCGTAGGGCTGCCCTCCGG +
Preference number: 5 (lower is better)
Translates to: GGSELGSSAHTTSCA*SRASALSTRRAALR
Trigger: CCGGAGGGCAGCCCTACGGGTGCTGAGCGCACTGGCTCTGGAGCATGCGCAGGACGTGGTGTGTGCGCTGCTACCCAGTTCGCTACCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS GCA 90 bp CGGTCCGGGGGTAGCGAACTGGGTAGCAGCGCACACACCACGTCCTaGGCATGCTCCAGAGCCAGTGCGCTCAGCACCCGTAGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: RSGGSELGSSAHTTS*ACSRASALSTRRAA
Trigger: GGCAGCCCTACGGGTGCTGAGCGCACTGGCTCTGGAGCATGCGCAGGACGTGGTGTGTGCGCTGCTACCCAGTTCGCTACCCCCGGACCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS CCA 90 bp GGCTTCGCCACAGCTCAGAGGCTGCCCGGTCCGGGGGTAGCGAACTaGGTAGCAGCGCACACACCACGTCCTGCGCATGCTCCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: GFATAQRLPGPGVAN*VAAHTPRPAHAPEP
Trigger: TGGCTCTGGAGCATGCGCAGGACGTGGTGTGTGCGCTGCTACCCAGTTCGCTACCCCCGGACCGGGCAGCCTCTGAGCTGTGGCGAAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS CCA 90 bp CTCCCACGCAGCCAGAGACGGCCAACATCTCTCCAAGAGCGCGAGTaGCTGCCAGGGCCTCAGACTCGGGAGCCGCCACACCCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: LPRSQRRPTSLQERE*LPGPQTREPPHPSV
Trigger: CACTGAAGGGTGTGGCGGCTCCCGAGTCTGAGGCCCTGGCAGCCACTCGCGCTCTTGGAGAGATGTTGGCCGTCTCTGGCTGCGTGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS TCA 90 bp GAGCATCGTCCAGTAGCGGTGGGAGACGTGGTCGAAGCTCGGAGCTaGGGAGTCTCACGGGTGCTCCGGGCTGCAGCAGTAGTCTCCGCA +
Preference number: 5 (lower is better)
Translates to: EHRPVAVGDVVEARS*GVSRVLRAAAVVSA
Trigger: TGCGGAGACTACTGCTGCAGCCCGGAGCACCCGTGAGACTCCTCAGCTCCGAGCTTCGACCACGTCTCCCACCGCTACTGGACGATGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS TCA 90 bp CATAGAGTGGATGGGGCCTTGGAGGGTATGAATGGTGGCGGCGGATaGAGCGGAAGAGGTTGGGGCTGCGTGTCTGGACCTGCGCCCGGG +
Preference number: 5 (lower is better)
Translates to: HRVDGALEGMNGGGG*SGRGWGCVSGPAPG
Trigger: CCCGGGCGCAGGTCCAGACACGCAGCCCCAACCTCTTCCGCTTCATCCGCCGCCACCATTCATACCCTCCAAGGCCCCATCCACTCTATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS GCA 90 bp AGTGGCTGCCAGGGCCTCAGACTCGGGAGCCGCCACACCCTTCAGTaGCCACAGCAGTTGCACCAACACCTGCCCGTTTACTCGCTGATT +
Preference number: 5 (lower is better)
Translates to: SGCQGLRLGSRHTLQ*PQQLHQHLPVYSLI
Trigger: AATCAGCGAGTAAACGGGCAGGTGTTGGTGCAACTGCTGTGGGCACTGAAGGGTGTGGCGGCTCCCGAGTCTGAGGCCCTGGCAGCCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS CCA 90 bp GCCACCATGGCACTGGCCAGCAGCAGGACACCCTCCAGGTGTGTGTaGGCTCCTACCAGTCTCCTCCAGCCTCCTGCTTGCTCCATACAT +
Preference number: 5 (lower is better)
Translates to: ATMALASSRTPSRCV*APTSLLQPPACSIH
Trigger: ATGTATGGAGCAAGCAGGAGGCTGGAGGAGACTGGTAGGAGCCCACACACACCTGGAGGGTGTCCTGCTGCTGGCCAGTGCCATGGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS TCA 90 bp TGGGGGCAACCACTTCATTCCCAGGCTGGGCCTCAAAGGCAGGGGTaGGTGTTTGAATATAGGGCTCAGGCTCGGGCCCAAGCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: WGQPLHSQAGPQRQG*VFEYRAQARAQAPG
Trigger: CCCAGGAGCTTGGGCCCGAGCCTGAGCCCTATATTCAAACACTCACCCCTGCCTTTGAGGCCCAGCCTGGGAATGAAGTGGTTGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS TCA 90 bp TTCAGTGCCCACAGCAGTTGCACCAACACCTGCCCGTTTACTCGCTaGTTCCGGCTTAGGCTTCGCCACAGCTCAGAGGCTGCCCGGTCC +
Preference number: 5 (lower is better)
Translates to: FSAHSSCTNTCPFTR*FRLRLRHSSEAARS
Trigger: GGACCGGGCAGCCTCTGAGCTGTGGCGAAGCCTAAGCCGGAATCAGCGAGTAAACGGGCAGGTGTTGGTGCAACTGCTGTGGGCACTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS TCA 90 bp CTTCGTAGCCGAGGGAGCAAGTCCGCAAAAAGGCCTCGGAGATGGTaGTCAGCATGTGCCACCATGGCACTGGCCAGCAGCAGGACACCC +
Preference number: 5 (lower is better)
Translates to: LRSRGSKSAKRPRRW*SACATMALASSRTP
Trigger: GGGTGTCCTGCTGCTGGCCAGTGCCATGGTGGCACATGCTGATCACCATCTCCGAGGCCTTTTTGCGGACTTGCTCCCTCGGCTACGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS GCA 90 bp AGGGCAAGTAGGCCTAGCCAGCGCACGGTGGGCTCTGGGTCACCCTaGCAAGTTCGAAGGCGCTCCAGGATGACTTCCTCACGTAAGAGA +
Preference number: 5 (lower is better)
Translates to: RASRPSQRTVGSGSP*QVRRRSRMTSSRKR
Trigger: TCTCTTACGTGAGGAAGTCATCCTGGAGCGCCTTCGAACTTGGCAGGGTGACCCAGAGCCCACCGTGCGCTGGCTAGGCCTACTTGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS TCA 90 bp GGCTGTCGGGGGAATGAGCACCTTGAGCCAGCTCATGCAGCTGTGTaGCCAGTGCTAACAGCAGGTGAGGGTAGAAGCCTCGAGTGGCTC +
Preference number: 5 (lower is better)
Translates to: GCRGNEHLEPAHAAV*PVLTAGEGRSLEWL
Trigger: GAGCCACTCGAGGCTTCTACCCTCACCTGCTGTTAGCACTGGTCACACAGCTGCATGAGCTGGCTCAAGGTGCTCATTCCCCCGACAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS CCA 90 bp CTGGCTCCTGGGCATTGTGTGGGGAATAGATCTCACTACCAGCTGTaGGGGCAACCACTTCATTCCCAGGCTGGGCCTCAAAGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: LAPGHCVGNRSHYQL*GQPLHSQAGPQRQG
Trigger: CCCCTGCCTTTGAGGCCCAGCCTGGGAATGAAGTGGTTGCCCCCACAGCTGGTAGTGAGATCTATTCCCCACACAATGCCCAGGAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS CCA 90 bp GTATACAACGCAAGGTCTGCAAGGGTTCCTTCCTCCCAGGAATACTaGGAAGCCTGGTACGGTCTCTCGGGGGCTGGCTCCTGGGCATTG +
Preference number: 5 (lower is better)
Translates to: VYNARSARVPSSQEY*EAWYGLSGAGSWAL
Trigger: CAATGCCCAGGAGCCAGCCCCCGAGAGACCGTACCAGGCTTCCCAGTATTCCTGGGAGGAAGGAACCCTTGCAGACCTTGCGTTGTATAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS CCA 90 bp CCGCAGGTAACCCTGGGTCTGACTCAGGAAGTATTGAACATGGCTTaGATATCGCTGAACCAGGCGGTGGCAGACGCGGCTGAGAGCCTC +
Preference number: 5 (lower is better)
Translates to: PQVTLGLTQEVLNMA*ISLNQAVADAAESL
Trigger: GAGGCTCTCAGCCGCGTCTGCCACCGCCTGGTTCAGCGATATCCAAGCCATGTTCAATACTTCCTGAGTCAGACCCAGGGTTACCTGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS CCA 90 bp TTCCTCCCAGGAATACTGGGAAGCCTGGTACGGTCTCTCGGGGGCTaGCTCCTGGGCATTGTGTGGGGAATAGATCTCACTACCAGCTGT +
Preference number: 5 (lower is better)
Translates to: FLPGILGSLVRSLGG*LLGIVWGIDLTTSC
Trigger: ACAGCTGGTAGTGAGATCTATTCCCCACACAATGCCCAGGAGCCAGCCCCCGAGAGACCGTACCAGGCTTCCCAGTATTCCTGGGAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS GCA 90 bp ATAGCCAGCCTCCTCCAGACAGGCAGCTGTATACAACGCAAGGTCTaGAAGGGTTCCTTCCTCCCAGGAATACTGGGAAGCCTGGTACGG +
Preference number: 5 (lower is better)
Translates to: IASLLQTGSCIQRKV*KGSFLPGILGSLVR
Trigger: CCGTACCAGGCTTCCCAGTATTCCTGGGAGGAAGGAACCCTTGCAGACCTTGCGTTGTATACAGCTGCCTGTCTGGAGGAGGCTGGCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS TCA 90 bp AGGCGCTCCAGGATGACTTCCTCACGTAAGAGACGTGCAGTAGACTaGCTCTGTAACAGCCCAGTAAAGAAGGCCATAGCGGTGAGGCGT +
Preference number: 5 (lower is better)
Translates to: RRSRMTSSRKRRAVD*LCNSPVKKAIAVRR
Trigger: ACGCCTCACCGCTATGGCCTTCTTTACTGGGCTGTTACAGAGTCAGTCTACTGCACGTCTCTTACGTGAGGAAGTCATCCTGGAGCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS CCA 90 bp TTCCTTTGGGCCTCGTATGATAGACCAGGAAACCTATTAGCACAGTaGCTGCCCTACGCAAGGTATCCTGTGGGCTCCGCAGGTAACCCT +
Preference number: 5 (lower is better)
Translates to: FLWASYDRPGNLLAQ*LPYARYPVGSAGNP
Trigger: AGGGTTACCTGCGGAGCCCACAGGATACCTTGCGTAGGGCAGCCACTGTGCTAATAGGTTTCCTGGTCTATCATACGAGGCCCAAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS GCA 90 bp CCTTCGCCCAGTGCTCTTAGGAGTACTGGCAGCAACATGTTCACATaGCTTATCTTCCCACGATTCATTGCAAGGTTGCCAAGGGCAAGT +
Preference number: 5 (lower is better)
Translates to: PSPSALRSTGSNMFT*LIFPRFIARLPRAS
Trigger: ACTTGCCCTTGGCAACCTTGCAATGAATCGTGGGAAGATAAGGCATGTGAACATGTTGCTGCCAGTACTCCTAAGAGCACTGGGCGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS CCA 72 bp GTCTGGACCTGCGCCCGGGCAAGCAGCGCCACCTGCTaGGCAGACACGTGCGCTGCCGAGGAAACCGCAGAC +
Preference number: 6 (lower is better)
Translates to: VWTCARASSATC*ADTCAAEETAD
Trigger: GTCTGCGGTTTCCTCGGCAGCGCACGTGTCTGCCCAGCAGGTGGCGCTGCTTGCCCGGGCGCAGGTCCAGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS CCA 72 bp CGGCGGATGAAGCGGAAGAGGTTGGGGCTGCGTGTCTaGACCTGCGCCCGGGCAAGCAGCGCCACCTGCTGG +
Preference number: 6 (lower is better)
Translates to: RRMKRKRLGLRV*TCARASSATCW
Trigger: CCAGCAGGTGGCGCTGCTTGCCCGGGCGCAGGTCCAGACACGCAGCCCCAACCTCTTCCGCTTCATCCGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS TCA 72 bp GGCTCAGGCTCGGGCCCAAGCTCCTGGGGATCAGACTaGGGGCCTGTAGAAGAGGGTCCCACAGGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: GSGSGPSSWGSD*GPVEEGPTGCP
Trigger: GGGGCAGCCTGTGGGACCCTCTTCTACAGGCCCTCAGTCTGATCCCCAGGAGCTTGGGCCCGAGCCTGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS CCA 72 bp ACAGCTCAGAGGCTGCCCGGTCCGGGGGTAGCGAACTaGGTAGCAGCGCACACACCACGTCCTGCGCATGCT +
Preference number: 6 (lower is better)
Translates to: TAQRLPGPGVAN*VAAHTPRPAHA
Trigger: AGCATGCGCAGGACGTGGTGTGTGCGCTGCTACCCAGTTCGCTACCCCCGGACCGGGCAGCCTCTGAGCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS GCA 72 bp GAACTGGGTAGCAGCGCACACACCACGTCCTGCGCATaGTCCAGAGCCAGTGCGCTCAGCACCCGTAGGGCT +
Preference number: 6 (lower is better)
Translates to: ELGSSAHTTSCA*SRASALSTRRA
Trigger: AGCCCTACGGGTGCTGAGCGCACTGGCTCTGGAGCATGCGCAGGACGTGGTGTGTGCGCTGCTACCCAGTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS GCA 72 bp GGTAGCGAACTGGGTAGCAGCGCACACACCACGTCCTaGGCATGCTCCAGAGCCAGTGCGCTCAGCACCCGT +
Preference number: 6 (lower is better)
Translates to: GSELGSSAHTTS*ACSRASALSTR
Trigger: ACGGGTGCTGAGCGCACTGGCTCTGGAGCATGCGCAGGACGTGGTGTGTGCGCTGCTACCCAGTTCGCTACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS CCA 72 bp GCACTGGCCAGCAGCAGGACACCCTCCAGGTGTGTGTaGGCTCCTACCAGTCTCCTCCAGCCTCCTGCTTGC +
Preference number: 6 (lower is better)
Translates to: ALASSRTPSRCV*APTSLLQPPAC
Trigger: GCAAGCAGGAGGCTGGAGGAGACTGGTAGGAGCCCACACACACCTGGAGGGTGTCCTGCTGCTGGCCAGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS GCA 72 bp CAGGGCCTCAGACTCGGGAGCCGCCACACCCTTCAGTaGCCACAGCAGTTGCACCAACACCTGCCCGTTTAC +
Preference number: 6 (lower is better)
Translates to: QGLRLGSRHTLQ*PQQLHQHLPVY
Trigger: GTAAACGGGCAGGTGTTGGTGCAACTGCTGTGGGCACTGAAGGGTGTGGCGGCTCCCGAGTCTGAGGCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS GCA 72 bp AGGCCTAGCCAGCGCACGGTGGGCTCTGGGTCACCCTaGCAAGTTCGAAGGCGCTCCAGGATGACTTCCTCA +
Preference number: 6 (lower is better)
Translates to: RPSQRTVGSGSP*QVRRRSRMTSS
Trigger: TGAGGAAGTCATCCTGGAGCGCCTTCGAACTTGGCAGGGTGACCCAGAGCCCACCGTGCGCTGGCTAGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS GCA 72 bp TGCGCTGCCGAGGAAACCGCAGACTCCGGGTCGCCCTaGAGCTGTCCTAGGTCCTGGAACAGAGAGTCCAAC +
Preference number: 6 (lower is better)
Translates to: CAAEETADSGSP*SCPRSWNRESN
Trigger: GTTGGACTCTCTGTTCCAGGACCTAGGACAGCTGCAGGGCGACCCGGAGTCTGCGGTTTCCTCGGCAGCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS TCA 72 bp GATGGGGCCTTGGAGGGTATGAATGGTGGCGGCGGATaGAGCGGAAGAGGTTGGGGCTGCGTGTCTGGACCT +
Preference number: 6 (lower is better)
Translates to: DGALEGMNGGGG*SGRGWGCVSGP
Trigger: AGGTCCAGACACGCAGCCCCAACCTCTTCCGCTTCATCCGCCGCCACCATTCATACCCTCCAAGGCCCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS CCA 72 bp GCAAGGGTTCCTTCCTCCCAGGAATACTGGGAAGCCTaGTACGGTCTCTCGGGGGCTGGCTCCTGGGCATTG +
Preference number: 6 (lower is better)
Translates to: ARVPSSQEYWEA*YGLSGAGSWAL
Trigger: CAATGCCCAGGAGCCAGCCCCCGAGAGACCGTACCAGGCTTCCCAGTATTCCTGGGAGGAAGGAACCCTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS TCA 72 bp CGAGGGAGCAAGTCCGCAAAAAGGCCTCGGAGATGGTaGTCAGCATGTGCCACCATGGCACTGGCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: RGSKSAKRPRRW*SACATMALASS
Trigger: GCTGCTGGCCAGTGCCATGGTGGCACATGCTGATCACCATCTCCGAGGCCTTTTTGCGGACTTGCTCCCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS TCA 72 bp GTTACCATCTCCTCCAGCAGGCCCCATCGAAGGGCCTaGTCGCAGCGGGCTAGTGTCCACTCAGAGCTCTCA +
Preference number: 6 (lower is better)
Translates to: VTISSSRPHRRA*SQRASVHSELS
Trigger: TGAGAGCTCTGAGTGGACACTAGCCCGCTGCGATCAGGCCCTTCGATGGGGCCTGCTGGAGGAGATGGTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS GCA 72 bp GTCCGCAAAAAGGCCTCGGAGATGGTGATCAGCATGTaGCACCATGGCACTGGCCAGCAGCAGGACACCCTC +
Preference number: 6 (lower is better)
Translates to: VRKKASEMVISM*HHGTGQQQDTL
Trigger: GAGGGTGTCCTGCTGCTGGCCAGTGCCATGGTGGCACATGCTGATCACCATCTCCGAGGCCTTTTTGCGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS CCA 72 bp GTACGGTCTCTCGGGGGCTGGCTCCTGGGCATTGTGTaGGGAATAGATCTCACTACCAGCTGTGGGGGCAAC +
Preference number: 6 (lower is better)
Translates to: VRSLGGWLLGIV*GIDLTTSCGGN
Trigger: GTTGCCCCCACAGCTGGTAGTGAGATCTATTCCCCACACAATGCCCAGGAGCCAGCCCCCGAGAGACCGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS CCA 72 bp CCAGTGCTAACAGCAGGTGAGGGTAGAAGCCTCGAGTaGCTCCCACGCAGCCAGAGACGGCCAACATCTCTC +
Preference number: 6 (lower is better)
Translates to: PVLTAGEGRSLE*LPRSQRRPTSL
Trigger: GAGAGATGTTGGCCGTCTCTGGCTGCGTGGGAGCCACTCGAGGCTTCTACCCTCACCTGCTGTTAGCACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS TCA 72 bp TTGGATATCGCTGAACCAGGCGGTGGCAGACGCGGCTaGGAGCCTCAGGGCTGTCGTAGTGAGCCACAGTTA +
Preference number: 6 (lower is better)
Translates to: LDIAEPGGGRRG*EPQGCRSEPQL
Trigger: TAACTGTGGCTCACTACGACAGCCCTGAGGCTCTCAGCCGCGTCTGCCACCGCCTGGTTCAGCGATATCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS CAA 72 bp CCAGTAAAGAAGGCCATAGCGGTGAGGCGTTGCGGGTaGTTGGCACTTCGTAGCCGAGGGAGCAAGTCCGCA +
Preference number: 6 (lower is better)
Translates to: PVKKAIAVRRCG*LALRSRGSKSA
Trigger: TGCGGACTTGCTCCCTCGGCTACGAAGTGCCAACAACCCGCAACGCCTCACCGCTATGGCCTTCTTTACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS CAA 90 bp AACAGCCCAGTAAAGAAGGCCATAGCGGTGAGGCGTTGCGGGTTGTaGGCACTTCGTAGCCGAGGGAGCAAGTCCGCAAAAAGGCCTCGG +
Preference number: 6 (lower is better)
Translates to: NSPVKKAIAVRRCGL*ALRSRGSKSAKRPR
Trigger: CCGAGGCCTTTTTGCGGACTTGCTCCCTCGGCTACGAAGTGCCAACAACCCGCAACGCCTCACCGCTATGGCCTTCTTTACTGGGCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS CAA 90 bp AACCACTTCATTCCCAGGCTGGGCCTCAAAGGCAGGGGTGAGTGTTaGAATATAGGGCTCAGGCTCGGGCCCAAGCTCCTGGGGATCAGA +
Preference number: 6 (lower is better)
Translates to: NHFIPRLGLKGRGEC*NIGLRLGPKLLGIR
Trigger: TCTGATCCCCAGGAGCTTGGGCCCGAGCCTGAGCCCTATATTCAAACACTCACCCCTGCCTTTGAGGCCCAGCCTGGGAATGAAGTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS CAA 90 bp ATCCTGTGGGCTCCGCAGGTAACCCTGGGTCTGACTCAGGAAGTATaGAACATGGCTTGGATATCGCTGAACCAGGCGGTGGCAGACGCG +
Preference number: 6 (lower is better)
Translates to: ILWAPQVTLGLTQEV*NMAWISLNQAVADA
Trigger: CGCGTCTGCCACCGCCTGGTTCAGCGATATCCAAGCCATGTTCAATACTTCCTGAGTCAGACCCAGGGTTACCTGCGGAGCCCACAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS TCA 72 bp CCACTTCATTCCCAGGCTGGGCCTCAAAGGCAGGGGTaGGTGTTTGAATATAGGGCTCAGGCTCGGGCCCAA +
Preference number: 6 (lower is better)
Translates to: PLHSQAGPQRQG*VFEYRAQARAQ
Trigger: TTGGGCCCGAGCCTGAGCCCTATATTCAAACACTCACCCCTGCCTTTGAGGCCCAGCCTGGGAATGAAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS TCA 72 bp CACAGCAGTTGCACCAACACCTGCCCGTTTACTCGCTaGTTCCGGCTTAGGCTTCGCCACAGCTCAGAGGCT +
Preference number: 6 (lower is better)
Translates to: HSSCTNTCPFTR*FRLRLRHSSEA
Trigger: AGCCTCTGAGCTGTGGCGAAGCCTAAGCCGGAATCAGCGAGTAAACGGGCAGGTGTTGGTGCAACTGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS GCA 72 bp AACAGCCCAGTAAAGAAGGCCATAGCGGTGAGGCGTTaGGGGTTGTTGGCACTTCGTAGCCGAGGGAGCAAG +
Preference number: 6 (lower is better)
Translates to: NSPVKKAIAVRR*GLLALRSRGSK
Trigger: CTTGCTCCCTCGGCTACGAAGTGCCAACAACCCGCAACGCCTCACCGCTATGGCCTTCTTTACTGGGCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS CCA 72 bp GGAATACTGGGAAGCCTGGTACGGTCTCTCGGGGGCTaGCTCCTGGGCATTGTGTGGGGAATAGATCTCACT +
Preference number: 6 (lower is better)
Translates to: GILGSLVRSLGG*LLGIVWGIDLT
Trigger: AGTGAGATCTATTCCCCACACAATGCCCAGGAGCCAGCCCCCGAGAGACCGTACCAGGCTTCCCAGTATTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS CAA 90 bp TGTAACAGCCCAGTAAAGAAGGCCATAGCGGTGAGGCGTTGCGGGTaGTTGGCACTTCGTAGCCGAGGGAGCAAGTCCGCAAAAAGGCCT +
Preference number: 6 (lower is better)
Translates to: CNSPVKKAIAVRRCG*LALRSRGSKSAKRP
Trigger: AGGCCTTTTTGCGGACTTGCTCCCTCGGCTACGAAGTGCCAACAACCCGCAACGCCTCACCGCTATGGCCTTCTTTACTGGGCTGTTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS TCA 72 bp GGGAATGAGCACCTTGAGCCAGCTCATGCAGCTGTGTaGCCAGTGCTAACAGCAGGTGAGGGTAGAAGCCTC +
Preference number: 6 (lower is better)
Translates to: GNEHLEPAHAAV*PVLTAGEGRSL
Trigger: GAGGCTTCTACCCTCACCTGCTGTTAGCACTGGTCACACAGCTGCATGAGCTGGCTCAAGGTGCTCATTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS CCA 72 bp GGGCATTGTGTGGGGAATAGATCTCACTACCAGCTGTaGGGGCAACCACTTCATTCCCAGGCTGGGCCTCAA +
Preference number: 6 (lower is better)
Translates to: GHCVGNRSHYQL*GQPLHSQAGPQ
Trigger: TTGAGGCCCAGCCTGGGAATGAAGTGGTTGCCCCCACAGCTGGTAGTGAGATCTATTCCCCACACAATGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS CCA 72 bp ACCCTGGGTCTGACTCAGGAAGTATTGAACATGGCTTaGATATCGCTGAACCAGGCGGTGGCAGACGCGGCT +
Preference number: 6 (lower is better)
Translates to: TLGLTQEVLNMA*ISLNQAVADAA
Trigger: AGCCGCGTCTGCCACCGCCTGGTTCAGCGATATCCAAGCCATGTTCAATACTTCCTGAGTCAGACCCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS CAA 72 bp GTAAAGAAGGCCATAGCGGTGAGGCGTTGCGGGTTGTaGGCACTTCGTAGCCGAGGGAGCAAGTCCGCAAAA +
Preference number: 6 (lower is better)
Translates to: VKKAIAVRRCGL*ALRSRGSKSAK
Trigger: TTTTGCGGACTTGCTCCCTCGGCTACGAAGTGCCAACAACCCGCAACGCCTCACCGCTATGGCCTTCTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS CAA 72 bp AACCCTGGGTCTGACTCAGGAAGTATTGAACATGGCTaGGATATCGCTGAACCAGGCGGTGGCAGACGCGGC +
Preference number: 6 (lower is better)
Translates to: NPGSDSGSIEHG*DIAEPGGGRRG
Trigger: GCCGCGTCTGCCACCGCCTGGTTCAGCGATATCCAAGCCATGTTCAATACTTCCTGAGTCAGACCCAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS CCA 72 bp GCCTCGTATGATAGACCAGGAAACCTATTAGCACAGTaGCTGCCCTACGCAAGGTATCCTGTGGGCTCCGCA +
Preference number: 6 (lower is better)
Translates to: ASYDRPGNLLAQ*LPYARYPVGSA
Trigger: TGCGGAGCCCACAGGATACCTTGCGTAGGGCAGCCACTGTGCTAATAGGTTTCCTGGTCTATCATACGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS CAA 72 bp GCTCCGCAGGTAACCCTGGGTCTGACTCAGGAAGTATaGAACATGGCTTGGATATCGCTGAACCAGGCGGTG +
Preference number: 6 (lower is better)
Translates to: APQVTLGLTQEV*NMAWISLNQAV
Trigger: CACCGCCTGGTTCAGCGATATCCAAGCCATGTTCAATACTTCCTGAGTCAGACCCAGGGTTACCTGCGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2
CDS GCA 72 bp AGTGCTCTTAGGAGTACTGGCAGCAACATGTTCACATaGCTTATCTTCCCACGATTCATTGCAAGGTTGCCA +
Preference number: 6 (lower is better)
Translates to: SALRSTGSNMFT*LIFPRFIARLP
Trigger: TGGCAACCTTGCAATGAATCGTGGGAAGATAAGGCATGTGAACATGTTGCTGCCAGTACTCCTAAGAGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184858.2