Pregenerated sensors for MROH6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000098678Ensembl transcript IDs: ENSMUST00000184858.2
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CCA 90 bp | GGGCTGCGTGTCTGGACCTGCGCCCGGGCAAGCAGCGCCACCTGCTaGGCAGACACGTGCGCTGCCGAGGAAACCGCAGACTCCGGGTCG | + |
Preference number: 5 (lower is better) Translates to: GLRVWTCARASSATC*ADTCAAEETADSGS Trigger: CGACCCGGAGTCTGCGGTTTCCTCGGCAGCGCACGTGTCTGCCCAGCAGGTGGCGCTGCTTGCCCGGGCGCAGGTCCAGACACGCAGCCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS GCA 90 bp | TGGACCTGCGCCCGGGCAAGCAGCGCCACCTGCTGGGCAGACACGTaGGCTGCCGAGGAAACCGCAGACTCCGGGTCGCCCTGCAGCTGT | + |
Preference number: 5 (lower is better) Translates to: WTCARASSATCWADT*AAEETADSGSPCSC Trigger: ACAGCTGCAGGGCGACCCGGAGTCTGCGGTTTCCTCGGCAGCGCACGTGTCTGCCCAGCAGGTGGCGCTGCTTGCCCGGGCGCAGGTCCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS GCA 90 bp | TGGCGGCGGATGAAGCGGAAGAGGTTGGGGCTGCGTGTCTGGACCTaGGCCCGGGCAAGCAGCGCCACCTGCTGGGCAGACACGTGCGCT | + |
Preference number: 5 (lower is better) Translates to: WRRMKRKRLGLRVWT*ARASSATCWADTCA Trigger: AGCGCACGTGTCTGCCCAGCAGGTGGCGCTGCTTGCCCGGGCGCAGGTCCAGACACGCAGCCCCAACCTCTTCCGCTTCATCCGCCGCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS GCA 90 bp | GGGGGTAGCGAACTGGGTAGCAGCGCACACACCACGTCCTGCGCATaGTCCAGAGCCAGTGCGCTCAGCACCCGTAGGGCTGCCCTCCGG | + |
Preference number: 5 (lower is better) Translates to: GGSELGSSAHTTSCA*SRASALSTRRAALR Trigger: CCGGAGGGCAGCCCTACGGGTGCTGAGCGCACTGGCTCTGGAGCATGCGCAGGACGTGGTGTGTGCGCTGCTACCCAGTTCGCTACCCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS GCA 90 bp | CGGTCCGGGGGTAGCGAACTGGGTAGCAGCGCACACACCACGTCCTaGGCATGCTCCAGAGCCAGTGCGCTCAGCACCCGTAGGGCTGCC | + |
Preference number: 5 (lower is better) Translates to: RSGGSELGSSAHTTS*ACSRASALSTRRAA Trigger: GGCAGCCCTACGGGTGCTGAGCGCACTGGCTCTGGAGCATGCGCAGGACGTGGTGTGTGCGCTGCTACCCAGTTCGCTACCCCCGGACCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS CCA 90 bp | GGCTTCGCCACAGCTCAGAGGCTGCCCGGTCCGGGGGTAGCGAACTaGGTAGCAGCGCACACACCACGTCCTGCGCATGCTCCAGAGCCA | + |
Preference number: 5 (lower is better) Translates to: GFATAQRLPGPGVAN*VAAHTPRPAHAPEP Trigger: TGGCTCTGGAGCATGCGCAGGACGTGGTGTGTGCGCTGCTACCCAGTTCGCTACCCCCGGACCGGGCAGCCTCTGAGCTGTGGCGAAGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS CCA 90 bp | CTCCCACGCAGCCAGAGACGGCCAACATCTCTCCAAGAGCGCGAGTaGCTGCCAGGGCCTCAGACTCGGGAGCCGCCACACCCTTCAGTG | + |
Preference number: 5 (lower is better) Translates to: LPRSQRRPTSLQERE*LPGPQTREPPHPSV Trigger: CACTGAAGGGTGTGGCGGCTCCCGAGTCTGAGGCCCTGGCAGCCACTCGCGCTCTTGGAGAGATGTTGGCCGTCTCTGGCTGCGTGGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS TCA 90 bp | GAGCATCGTCCAGTAGCGGTGGGAGACGTGGTCGAAGCTCGGAGCTaGGGAGTCTCACGGGTGCTCCGGGCTGCAGCAGTAGTCTCCGCA | + |
Preference number: 5 (lower is better) Translates to: EHRPVAVGDVVEARS*GVSRVLRAAAVVSA Trigger: TGCGGAGACTACTGCTGCAGCCCGGAGCACCCGTGAGACTCCTCAGCTCCGAGCTTCGACCACGTCTCCCACCGCTACTGGACGATGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS TCA 90 bp | CATAGAGTGGATGGGGCCTTGGAGGGTATGAATGGTGGCGGCGGATaGAGCGGAAGAGGTTGGGGCTGCGTGTCTGGACCTGCGCCCGGG | + |
Preference number: 5 (lower is better) Translates to: HRVDGALEGMNGGGG*SGRGWGCVSGPAPG Trigger: CCCGGGCGCAGGTCCAGACACGCAGCCCCAACCTCTTCCGCTTCATCCGCCGCCACCATTCATACCCTCCAAGGCCCCATCCACTCTATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS GCA 90 bp | AGTGGCTGCCAGGGCCTCAGACTCGGGAGCCGCCACACCCTTCAGTaGCCACAGCAGTTGCACCAACACCTGCCCGTTTACTCGCTGATT | + |
Preference number: 5 (lower is better) Translates to: SGCQGLRLGSRHTLQ*PQQLHQHLPVYSLI Trigger: AATCAGCGAGTAAACGGGCAGGTGTTGGTGCAACTGCTGTGGGCACTGAAGGGTGTGGCGGCTCCCGAGTCTGAGGCCCTGGCAGCCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS CCA 90 bp | GCCACCATGGCACTGGCCAGCAGCAGGACACCCTCCAGGTGTGTGTaGGCTCCTACCAGTCTCCTCCAGCCTCCTGCTTGCTCCATACAT | + |
Preference number: 5 (lower is better) Translates to: ATMALASSRTPSRCV*APTSLLQPPACSIH Trigger: ATGTATGGAGCAAGCAGGAGGCTGGAGGAGACTGGTAGGAGCCCACACACACCTGGAGGGTGTCCTGCTGCTGGCCAGTGCCATGGTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS TCA 90 bp | TGGGGGCAACCACTTCATTCCCAGGCTGGGCCTCAAAGGCAGGGGTaGGTGTTTGAATATAGGGCTCAGGCTCGGGCCCAAGCTCCTGGG | + |
Preference number: 5 (lower is better) Translates to: WGQPLHSQAGPQRQG*VFEYRAQARAQAPG Trigger: CCCAGGAGCTTGGGCCCGAGCCTGAGCCCTATATTCAAACACTCACCCCTGCCTTTGAGGCCCAGCCTGGGAATGAAGTGGTTGCCCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS TCA 90 bp | TTCAGTGCCCACAGCAGTTGCACCAACACCTGCCCGTTTACTCGCTaGTTCCGGCTTAGGCTTCGCCACAGCTCAGAGGCTGCCCGGTCC | + |
Preference number: 5 (lower is better) Translates to: FSAHSSCTNTCPFTR*FRLRLRHSSEAARS Trigger: GGACCGGGCAGCCTCTGAGCTGTGGCGAAGCCTAAGCCGGAATCAGCGAGTAAACGGGCAGGTGTTGGTGCAACTGCTGTGGGCACTGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS TCA 90 bp | CTTCGTAGCCGAGGGAGCAAGTCCGCAAAAAGGCCTCGGAGATGGTaGTCAGCATGTGCCACCATGGCACTGGCCAGCAGCAGGACACCC | + |
Preference number: 5 (lower is better) Translates to: LRSRGSKSAKRPRRW*SACATMALASSRTP Trigger: GGGTGTCCTGCTGCTGGCCAGTGCCATGGTGGCACATGCTGATCACCATCTCCGAGGCCTTTTTGCGGACTTGCTCCCTCGGCTACGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS GCA 90 bp | AGGGCAAGTAGGCCTAGCCAGCGCACGGTGGGCTCTGGGTCACCCTaGCAAGTTCGAAGGCGCTCCAGGATGACTTCCTCACGTAAGAGA | + |
Preference number: 5 (lower is better) Translates to: RASRPSQRTVGSGSP*QVRRRSRMTSSRKR Trigger: TCTCTTACGTGAGGAAGTCATCCTGGAGCGCCTTCGAACTTGGCAGGGTGACCCAGAGCCCACCGTGCGCTGGCTAGGCCTACTTGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS TCA 90 bp | GGCTGTCGGGGGAATGAGCACCTTGAGCCAGCTCATGCAGCTGTGTaGCCAGTGCTAACAGCAGGTGAGGGTAGAAGCCTCGAGTGGCTC | + |
Preference number: 5 (lower is better) Translates to: GCRGNEHLEPAHAAV*PVLTAGEGRSLEWL Trigger: GAGCCACTCGAGGCTTCTACCCTCACCTGCTGTTAGCACTGGTCACACAGCTGCATGAGCTGGCTCAAGGTGCTCATTCCCCCGACAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS CCA 90 bp | CTGGCTCCTGGGCATTGTGTGGGGAATAGATCTCACTACCAGCTGTaGGGGCAACCACTTCATTCCCAGGCTGGGCCTCAAAGGCAGGGG | + |
Preference number: 5 (lower is better) Translates to: LAPGHCVGNRSHYQL*GQPLHSQAGPQRQG Trigger: CCCCTGCCTTTGAGGCCCAGCCTGGGAATGAAGTGGTTGCCCCCACAGCTGGTAGTGAGATCTATTCCCCACACAATGCCCAGGAGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS CCA 90 bp | GTATACAACGCAAGGTCTGCAAGGGTTCCTTCCTCCCAGGAATACTaGGAAGCCTGGTACGGTCTCTCGGGGGCTGGCTCCTGGGCATTG | + |
Preference number: 5 (lower is better) Translates to: VYNARSARVPSSQEY*EAWYGLSGAGSWAL Trigger: CAATGCCCAGGAGCCAGCCCCCGAGAGACCGTACCAGGCTTCCCAGTATTCCTGGGAGGAAGGAACCCTTGCAGACCTTGCGTTGTATAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS CCA 90 bp | CCGCAGGTAACCCTGGGTCTGACTCAGGAAGTATTGAACATGGCTTaGATATCGCTGAACCAGGCGGTGGCAGACGCGGCTGAGAGCCTC | + |
Preference number: 5 (lower is better) Translates to: PQVTLGLTQEVLNMA*ISLNQAVADAAESL Trigger: GAGGCTCTCAGCCGCGTCTGCCACCGCCTGGTTCAGCGATATCCAAGCCATGTTCAATACTTCCTGAGTCAGACCCAGGGTTACCTGCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS CCA 90 bp | TTCCTCCCAGGAATACTGGGAAGCCTGGTACGGTCTCTCGGGGGCTaGCTCCTGGGCATTGTGTGGGGAATAGATCTCACTACCAGCTGT | + |
Preference number: 5 (lower is better) Translates to: FLPGILGSLVRSLGG*LLGIVWGIDLTTSC Trigger: ACAGCTGGTAGTGAGATCTATTCCCCACACAATGCCCAGGAGCCAGCCCCCGAGAGACCGTACCAGGCTTCCCAGTATTCCTGGGAGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS GCA 90 bp | ATAGCCAGCCTCCTCCAGACAGGCAGCTGTATACAACGCAAGGTCTaGAAGGGTTCCTTCCTCCCAGGAATACTGGGAAGCCTGGTACGG | + |
Preference number: 5 (lower is better) Translates to: IASLLQTGSCIQRKV*KGSFLPGILGSLVR Trigger: CCGTACCAGGCTTCCCAGTATTCCTGGGAGGAAGGAACCCTTGCAGACCTTGCGTTGTATACAGCTGCCTGTCTGGAGGAGGCTGGCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS TCA 90 bp | AGGCGCTCCAGGATGACTTCCTCACGTAAGAGACGTGCAGTAGACTaGCTCTGTAACAGCCCAGTAAAGAAGGCCATAGCGGTGAGGCGT | + |
Preference number: 5 (lower is better) Translates to: RRSRMTSSRKRRAVD*LCNSPVKKAIAVRR Trigger: ACGCCTCACCGCTATGGCCTTCTTTACTGGGCTGTTACAGAGTCAGTCTACTGCACGTCTCTTACGTGAGGAAGTCATCCTGGAGCGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS CCA 90 bp | TTCCTTTGGGCCTCGTATGATAGACCAGGAAACCTATTAGCACAGTaGCTGCCCTACGCAAGGTATCCTGTGGGCTCCGCAGGTAACCCT | + |
Preference number: 5 (lower is better) Translates to: FLWASYDRPGNLLAQ*LPYARYPVGSAGNP Trigger: AGGGTTACCTGCGGAGCCCACAGGATACCTTGCGTAGGGCAGCCACTGTGCTAATAGGTTTCCTGGTCTATCATACGAGGCCCAAAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS GCA 90 bp | CCTTCGCCCAGTGCTCTTAGGAGTACTGGCAGCAACATGTTCACATaGCTTATCTTCCCACGATTCATTGCAAGGTTGCCAAGGGCAAGT | + |
Preference number: 5 (lower is better) Translates to: PSPSALRSTGSNMFT*LIFPRFIARLPRAS Trigger: ACTTGCCCTTGGCAACCTTGCAATGAATCGTGGGAAGATAAGGCATGTGAACATGTTGCTGCCAGTACTCCTAAGAGCACTGGGCGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS CCA 72 bp | GTCTGGACCTGCGCCCGGGCAAGCAGCGCCACCTGCTaGGCAGACACGTGCGCTGCCGAGGAAACCGCAGAC | + |
Preference number: 6 (lower is better) Translates to: VWTCARASSATC*ADTCAAEETAD Trigger: GTCTGCGGTTTCCTCGGCAGCGCACGTGTCTGCCCAGCAGGTGGCGCTGCTTGCCCGGGCGCAGGTCCAGAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS CCA 72 bp | CGGCGGATGAAGCGGAAGAGGTTGGGGCTGCGTGTCTaGACCTGCGCCCGGGCAAGCAGCGCCACCTGCTGG | + |
Preference number: 6 (lower is better) Translates to: RRMKRKRLGLRV*TCARASSATCW Trigger: CCAGCAGGTGGCGCTGCTTGCCCGGGCGCAGGTCCAGACACGCAGCCCCAACCTCTTCCGCTTCATCCGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS TCA 72 bp | GGCTCAGGCTCGGGCCCAAGCTCCTGGGGATCAGACTaGGGGCCTGTAGAAGAGGGTCCCACAGGCTGCCCC | + |
Preference number: 6 (lower is better) Translates to: GSGSGPSSWGSD*GPVEEGPTGCP Trigger: GGGGCAGCCTGTGGGACCCTCTTCTACAGGCCCTCAGTCTGATCCCCAGGAGCTTGGGCCCGAGCCTGAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS CCA 72 bp | ACAGCTCAGAGGCTGCCCGGTCCGGGGGTAGCGAACTaGGTAGCAGCGCACACACCACGTCCTGCGCATGCT | + |
Preference number: 6 (lower is better) Translates to: TAQRLPGPGVAN*VAAHTPRPAHA Trigger: AGCATGCGCAGGACGTGGTGTGTGCGCTGCTACCCAGTTCGCTACCCCCGGACCGGGCAGCCTCTGAGCTGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS GCA 72 bp | GAACTGGGTAGCAGCGCACACACCACGTCCTGCGCATaGTCCAGAGCCAGTGCGCTCAGCACCCGTAGGGCT | + |
Preference number: 6 (lower is better) Translates to: ELGSSAHTTSCA*SRASALSTRRA Trigger: AGCCCTACGGGTGCTGAGCGCACTGGCTCTGGAGCATGCGCAGGACGTGGTGTGTGCGCTGCTACCCAGTTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS GCA 72 bp | GGTAGCGAACTGGGTAGCAGCGCACACACCACGTCCTaGGCATGCTCCAGAGCCAGTGCGCTCAGCACCCGT | + |
Preference number: 6 (lower is better) Translates to: GSELGSSAHTTS*ACSRASALSTR Trigger: ACGGGTGCTGAGCGCACTGGCTCTGGAGCATGCGCAGGACGTGGTGTGTGCGCTGCTACCCAGTTCGCTACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS CCA 72 bp | GCACTGGCCAGCAGCAGGACACCCTCCAGGTGTGTGTaGGCTCCTACCAGTCTCCTCCAGCCTCCTGCTTGC | + |
Preference number: 6 (lower is better) Translates to: ALASSRTPSRCV*APTSLLQPPAC Trigger: GCAAGCAGGAGGCTGGAGGAGACTGGTAGGAGCCCACACACACCTGGAGGGTGTCCTGCTGCTGGCCAGTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS GCA 72 bp | CAGGGCCTCAGACTCGGGAGCCGCCACACCCTTCAGTaGCCACAGCAGTTGCACCAACACCTGCCCGTTTAC | + |
Preference number: 6 (lower is better) Translates to: QGLRLGSRHTLQ*PQQLHQHLPVY Trigger: GTAAACGGGCAGGTGTTGGTGCAACTGCTGTGGGCACTGAAGGGTGTGGCGGCTCCCGAGTCTGAGGCCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS GCA 72 bp | AGGCCTAGCCAGCGCACGGTGGGCTCTGGGTCACCCTaGCAAGTTCGAAGGCGCTCCAGGATGACTTCCTCA | + |
Preference number: 6 (lower is better) Translates to: RPSQRTVGSGSP*QVRRRSRMTSS Trigger: TGAGGAAGTCATCCTGGAGCGCCTTCGAACTTGGCAGGGTGACCCAGAGCCCACCGTGCGCTGGCTAGGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS GCA 72 bp | TGCGCTGCCGAGGAAACCGCAGACTCCGGGTCGCCCTaGAGCTGTCCTAGGTCCTGGAACAGAGAGTCCAAC | + |
Preference number: 6 (lower is better) Translates to: CAAEETADSGSP*SCPRSWNRESN Trigger: GTTGGACTCTCTGTTCCAGGACCTAGGACAGCTGCAGGGCGACCCGGAGTCTGCGGTTTCCTCGGCAGCGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS TCA 72 bp | GATGGGGCCTTGGAGGGTATGAATGGTGGCGGCGGATaGAGCGGAAGAGGTTGGGGCTGCGTGTCTGGACCT | + |
Preference number: 6 (lower is better) Translates to: DGALEGMNGGGG*SGRGWGCVSGP Trigger: AGGTCCAGACACGCAGCCCCAACCTCTTCCGCTTCATCCGCCGCCACCATTCATACCCTCCAAGGCCCCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS CCA 72 bp | GCAAGGGTTCCTTCCTCCCAGGAATACTGGGAAGCCTaGTACGGTCTCTCGGGGGCTGGCTCCTGGGCATTG | + |
Preference number: 6 (lower is better) Translates to: ARVPSSQEYWEA*YGLSGAGSWAL Trigger: CAATGCCCAGGAGCCAGCCCCCGAGAGACCGTACCAGGCTTCCCAGTATTCCTGGGAGGAAGGAACCCTTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS TCA 72 bp | CGAGGGAGCAAGTCCGCAAAAAGGCCTCGGAGATGGTaGTCAGCATGTGCCACCATGGCACTGGCCAGCAGC | + |
Preference number: 6 (lower is better) Translates to: RGSKSAKRPRRW*SACATMALASS Trigger: GCTGCTGGCCAGTGCCATGGTGGCACATGCTGATCACCATCTCCGAGGCCTTTTTGCGGACTTGCTCCCTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS TCA 72 bp | GTTACCATCTCCTCCAGCAGGCCCCATCGAAGGGCCTaGTCGCAGCGGGCTAGTGTCCACTCAGAGCTCTCA | + |
Preference number: 6 (lower is better) Translates to: VTISSSRPHRRA*SQRASVHSELS Trigger: TGAGAGCTCTGAGTGGACACTAGCCCGCTGCGATCAGGCCCTTCGATGGGGCCTGCTGGAGGAGATGGTAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS GCA 72 bp | GTCCGCAAAAAGGCCTCGGAGATGGTGATCAGCATGTaGCACCATGGCACTGGCCAGCAGCAGGACACCCTC | + |
Preference number: 6 (lower is better) Translates to: VRKKASEMVISM*HHGTGQQQDTL Trigger: GAGGGTGTCCTGCTGCTGGCCAGTGCCATGGTGGCACATGCTGATCACCATCTCCGAGGCCTTTTTGCGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS CCA 72 bp | GTACGGTCTCTCGGGGGCTGGCTCCTGGGCATTGTGTaGGGAATAGATCTCACTACCAGCTGTGGGGGCAAC | + |
Preference number: 6 (lower is better) Translates to: VRSLGGWLLGIV*GIDLTTSCGGN Trigger: GTTGCCCCCACAGCTGGTAGTGAGATCTATTCCCCACACAATGCCCAGGAGCCAGCCCCCGAGAGACCGTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS CCA 72 bp | CCAGTGCTAACAGCAGGTGAGGGTAGAAGCCTCGAGTaGCTCCCACGCAGCCAGAGACGGCCAACATCTCTC | + |
Preference number: 6 (lower is better) Translates to: PVLTAGEGRSLE*LPRSQRRPTSL Trigger: GAGAGATGTTGGCCGTCTCTGGCTGCGTGGGAGCCACTCGAGGCTTCTACCCTCACCTGCTGTTAGCACTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS TCA 72 bp | TTGGATATCGCTGAACCAGGCGGTGGCAGACGCGGCTaGGAGCCTCAGGGCTGTCGTAGTGAGCCACAGTTA | + |
Preference number: 6 (lower is better) Translates to: LDIAEPGGGRRG*EPQGCRSEPQL Trigger: TAACTGTGGCTCACTACGACAGCCCTGAGGCTCTCAGCCGCGTCTGCCACCGCCTGGTTCAGCGATATCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS CAA 72 bp | CCAGTAAAGAAGGCCATAGCGGTGAGGCGTTGCGGGTaGTTGGCACTTCGTAGCCGAGGGAGCAAGTCCGCA | + |
Preference number: 6 (lower is better) Translates to: PVKKAIAVRRCG*LALRSRGSKSA Trigger: TGCGGACTTGCTCCCTCGGCTACGAAGTGCCAACAACCCGCAACGCCTCACCGCTATGGCCTTCTTTACTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS CAA 90 bp | AACAGCCCAGTAAAGAAGGCCATAGCGGTGAGGCGTTGCGGGTTGTaGGCACTTCGTAGCCGAGGGAGCAAGTCCGCAAAAAGGCCTCGG | + |
Preference number: 6 (lower is better) Translates to: NSPVKKAIAVRRCGL*ALRSRGSKSAKRPR Trigger: CCGAGGCCTTTTTGCGGACTTGCTCCCTCGGCTACGAAGTGCCAACAACCCGCAACGCCTCACCGCTATGGCCTTCTTTACTGGGCTGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS CAA 90 bp | AACCACTTCATTCCCAGGCTGGGCCTCAAAGGCAGGGGTGAGTGTTaGAATATAGGGCTCAGGCTCGGGCCCAAGCTCCTGGGGATCAGA | + |
Preference number: 6 (lower is better) Translates to: NHFIPRLGLKGRGEC*NIGLRLGPKLLGIR Trigger: TCTGATCCCCAGGAGCTTGGGCCCGAGCCTGAGCCCTATATTCAAACACTCACCCCTGCCTTTGAGGCCCAGCCTGGGAATGAAGTGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS CAA 90 bp | ATCCTGTGGGCTCCGCAGGTAACCCTGGGTCTGACTCAGGAAGTATaGAACATGGCTTGGATATCGCTGAACCAGGCGGTGGCAGACGCG | + |
Preference number: 6 (lower is better) Translates to: ILWAPQVTLGLTQEV*NMAWISLNQAVADA Trigger: CGCGTCTGCCACCGCCTGGTTCAGCGATATCCAAGCCATGTTCAATACTTCCTGAGTCAGACCCAGGGTTACCTGCGGAGCCCACAGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS TCA 72 bp | CCACTTCATTCCCAGGCTGGGCCTCAAAGGCAGGGGTaGGTGTTTGAATATAGGGCTCAGGCTCGGGCCCAA | + |
Preference number: 6 (lower is better) Translates to: PLHSQAGPQRQG*VFEYRAQARAQ Trigger: TTGGGCCCGAGCCTGAGCCCTATATTCAAACACTCACCCCTGCCTTTGAGGCCCAGCCTGGGAATGAAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS TCA 72 bp | CACAGCAGTTGCACCAACACCTGCCCGTTTACTCGCTaGTTCCGGCTTAGGCTTCGCCACAGCTCAGAGGCT | + |
Preference number: 6 (lower is better) Translates to: HSSCTNTCPFTR*FRLRLRHSSEA Trigger: AGCCTCTGAGCTGTGGCGAAGCCTAAGCCGGAATCAGCGAGTAAACGGGCAGGTGTTGGTGCAACTGCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS GCA 72 bp | AACAGCCCAGTAAAGAAGGCCATAGCGGTGAGGCGTTaGGGGTTGTTGGCACTTCGTAGCCGAGGGAGCAAG | + |
Preference number: 6 (lower is better) Translates to: NSPVKKAIAVRR*GLLALRSRGSK Trigger: CTTGCTCCCTCGGCTACGAAGTGCCAACAACCCGCAACGCCTCACCGCTATGGCCTTCTTTACTGGGCTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS CCA 72 bp | GGAATACTGGGAAGCCTGGTACGGTCTCTCGGGGGCTaGCTCCTGGGCATTGTGTGGGGAATAGATCTCACT | + |
Preference number: 6 (lower is better) Translates to: GILGSLVRSLGG*LLGIVWGIDLT Trigger: AGTGAGATCTATTCCCCACACAATGCCCAGGAGCCAGCCCCCGAGAGACCGTACCAGGCTTCCCAGTATTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS CAA 90 bp | TGTAACAGCCCAGTAAAGAAGGCCATAGCGGTGAGGCGTTGCGGGTaGTTGGCACTTCGTAGCCGAGGGAGCAAGTCCGCAAAAAGGCCT | + |
Preference number: 6 (lower is better) Translates to: CNSPVKKAIAVRRCG*LALRSRGSKSAKRP Trigger: AGGCCTTTTTGCGGACTTGCTCCCTCGGCTACGAAGTGCCAACAACCCGCAACGCCTCACCGCTATGGCCTTCTTTACTGGGCTGTTACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS TCA 72 bp | GGGAATGAGCACCTTGAGCCAGCTCATGCAGCTGTGTaGCCAGTGCTAACAGCAGGTGAGGGTAGAAGCCTC | + |
Preference number: 6 (lower is better) Translates to: GNEHLEPAHAAV*PVLTAGEGRSL Trigger: GAGGCTTCTACCCTCACCTGCTGTTAGCACTGGTCACACAGCTGCATGAGCTGGCTCAAGGTGCTCATTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS CCA 72 bp | GGGCATTGTGTGGGGAATAGATCTCACTACCAGCTGTaGGGGCAACCACTTCATTCCCAGGCTGGGCCTCAA | + |
Preference number: 6 (lower is better) Translates to: GHCVGNRSHYQL*GQPLHSQAGPQ Trigger: TTGAGGCCCAGCCTGGGAATGAAGTGGTTGCCCCCACAGCTGGTAGTGAGATCTATTCCCCACACAATGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS CCA 72 bp | ACCCTGGGTCTGACTCAGGAAGTATTGAACATGGCTTaGATATCGCTGAACCAGGCGGTGGCAGACGCGGCT | + |
Preference number: 6 (lower is better) Translates to: TLGLTQEVLNMA*ISLNQAVADAA Trigger: AGCCGCGTCTGCCACCGCCTGGTTCAGCGATATCCAAGCCATGTTCAATACTTCCTGAGTCAGACCCAGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS CAA 72 bp | GTAAAGAAGGCCATAGCGGTGAGGCGTTGCGGGTTGTaGGCACTTCGTAGCCGAGGGAGCAAGTCCGCAAAA | + |
Preference number: 6 (lower is better) Translates to: VKKAIAVRRCGL*ALRSRGSKSAK Trigger: TTTTGCGGACTTGCTCCCTCGGCTACGAAGTGCCAACAACCCGCAACGCCTCACCGCTATGGCCTTCTTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS CAA 72 bp | AACCCTGGGTCTGACTCAGGAAGTATTGAACATGGCTaGGATATCGCTGAACCAGGCGGTGGCAGACGCGGC | + |
Preference number: 6 (lower is better) Translates to: NPGSDSGSIEHG*DIAEPGGGRRG Trigger: GCCGCGTCTGCCACCGCCTGGTTCAGCGATATCCAAGCCATGTTCAATACTTCCTGAGTCAGACCCAGGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS CCA 72 bp | GCCTCGTATGATAGACCAGGAAACCTATTAGCACAGTaGCTGCCCTACGCAAGGTATCCTGTGGGCTCCGCA | + |
Preference number: 6 (lower is better) Translates to: ASYDRPGNLLAQ*LPYARYPVGSA Trigger: TGCGGAGCCCACAGGATACCTTGCGTAGGGCAGCCACTGTGCTAATAGGTTTCCTGGTCTATCATACGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS CAA 72 bp | GCTCCGCAGGTAACCCTGGGTCTGACTCAGGAAGTATaGAACATGGCTTGGATATCGCTGAACCAGGCGGTG | + |
Preference number: 6 (lower is better) Translates to: APQVTLGLTQEV*NMAWISLNQAV Trigger: CACCGCCTGGTTCAGCGATATCCAAGCCATGTTCAATACTTCCTGAGTCAGACCCAGGGTTACCTGCGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |
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CDS GCA 72 bp | AGTGCTCTTAGGAGTACTGGCAGCAACATGTTCACATaGCTTATCTTCCCACGATTCATTGCAAGGTTGCCA | + |
Preference number: 6 (lower is better) Translates to: SALRSTGSNMFT*LIFPRFIARLP Trigger: TGGCAACCTTGCAATGAATCGTGGGAAGATAAGGCATGTGAACATGTTGCTGCCAGTACTCCTAAGAGCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184858.2 |