Pregenerated sensors for MROH4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022603Ensembl transcript IDs: ENSMUST00000023271.8, ENSMUST00000137963.8, ENSMUST00000176767.2
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGCCCAGGTGCTCCAACAGGGCCCACACCTCCTCCAAGTGCTTGGTaGAGGCCAGGCCCACAGCCAGTGCAATGCCCTCCCGCTGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: GPGAPTGPTPPPSAW*RPGPQPVQCPPAVW Trigger: CCAGACAGCGGGAGGGCATTGCACTGGCTGTGGGCCTGGCCTCCACCAAGCACTTGGAGGAGGTGTGGGCCCTGTTGGAGCACCTGGGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 ENSMUST00000176767.2 |
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| CDS GCA 90 bp | TTGGTACGGCCCAGGTGCTCCAACAGGGCCCACACCTCCTCCAAGTaGTTGGTGGAGGCCAGGCCCACAGCCAGTGCAATGCCCTCCCGC | + |
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Preference number: 5 (lower is better) Translates to: LVRPRCSNRAHTSSK*LVEARPTASAMPSR Trigger: GCGGGAGGGCATTGCACTGGCTGTGGGCCTGGCCTCCACCAAGCACTTGGAGGAGGTGTGGGCCCTGTTGGAGCACCTGGGCCGTACCAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 ENSMUST00000176767.2 |
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| CDS CCA 90 bp | TGCCCTCCCGCTGTCTGGAGTGCTGATGGGACAAATCCAGGAGGCTaGCCAGGTGGCACTGCACCTTCTCCACGCTGGGGCACTCACGCA | + |
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Preference number: 5 (lower is better) Translates to: CPPAVWSADGTNPGG*PGGTAPSPRWGTHA Trigger: TGCGTGAGTGCCCCAGCGTGGAGAAGGTGCAGTGCCACCTGGCCAGCCTCCTGGATTTGTCCCATCAGCACTCCAGACAGCGGGAGGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 ENSMUST00000176767.2 |
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| CDS CCA 90 bp | TGGTGGAGGCCAGGCCCACAGCCAGTGCAATGCCCTCCCGCTGTCTaGAGTGCTGATGGGACAAATCCAGGAGGCTGGCCAGGTGGCACT | + |
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Preference number: 5 (lower is better) Translates to: WWRPGPQPVQCPPAV*SADGTNPGGWPGGT Trigger: AGTGCCACCTGGCCAGCCTCCTGGATTTGTCCCATCAGCACTCCAGACAGCGGGAGGGCATTGCACTGGCTGTGGGCCTGGCCTCCACCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 ENSMUST00000176767.2 |
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| CDS GCA 90 bp | CCTCCTCCAAGTGCTTGGTGGAGGCCAGGCCCACAGCCAGTGCAATaGCCTCCCGCTGTCTGGAGTGCTGATGGGACAAATCCAGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: PPPSAWWRPGPQPVQ*PPAVWSADGTNPGG Trigger: GCCTCCTGGATTTGTCCCATCAGCACTCCAGACAGCGGGAGGGCATTGCACTGGCTGTGGGCCTGGCCTCCACCAAGCACTTGGAGGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 ENSMUST00000176767.2 |
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| CDS GCA 90 bp | CCACACCTCCTCCAAGTGCTTGGTGGAGGCCAGGCCCACAGCCAGTaGAATGCCCTCCCGCTGTCTGGAGTGCTGATGGGACAAATCCAG | + |
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Preference number: 5 (lower is better) Translates to: PHLLQVLGGGQAHSQ*NALPLSGVLMGQIQ Trigger: CTGGATTTGTCCCATCAGCACTCCAGACAGCGGGAGGGCATTGCACTGGCTGTGGGCCTGGCCTCCACCAAGCACTTGGAGGAGGTGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 ENSMUST00000176767.2 |
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| CDS TCA 90 bp | ACAGGCCTTGCACTAGGCCCACCTCCAGCAGGTAGTAGAGCTCTGTaGGGAGGCCCAGAAGGATGCCCGAGAAGGCCCAGCAGACTGTGT | + |
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Preference number: 5 (lower is better) Translates to: TGLALGPPPAGSRAL*GGPEGCPRRPSRLC Trigger: ACACAGTCTGCTGGGCCTTCTCGGGCATCCTTCTGGGCCTCCTCACAGAGCTCTACTACCTGCTGGAGGTGGGCCTAGTGCAAGGCCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
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| CDS GCA 90 bp | TCCTCTGTTGCAGCAACTGATTGCAGAAACTTGGTACGGCCCAGGTaGTCCAACAGGGCCCACACCTCCTCCAAGTGCTTGGTGGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: SSVAATDCRNLVRPR*SNRAHTSSKCLVEA Trigger: GGCCTCCACCAAGCACTTGGAGGAGGTGTGGGCCCTGTTGGAGCACCTGGGCCGTACCAAGTTTCTGCAATCAGTTGCTGCAACAGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 ENSMUST00000176767.2 |
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| CDS GCA 90 bp | CGAAGGTTGTCTGATGGCTGGCTGTCCTCTGTTGCAGCAACTGATTaGAGAAACTTGGTACGGCCCAGGTGCTCCAACAGGGCCCACACC | + |
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Preference number: 5 (lower is better) Translates to: RRLSDGWLSSVAATD*RNLVRPRCSNRAHT Trigger: GGTGTGGGCCCTGTTGGAGCACCTGGGCCGTACCAAGTTTCTGCAATCAGTTGCTGCAACAGAGGACAGCCAGCCATCAGACAACCTTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176767.2 |
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| CDS CCA 90 bp | ACAAATCCAGGAGGCTGGCCAGGTGGCACTGCACCTTCTCCACGCTaGGGCACTCACGCAGGATCATGCCATAGAGGTGGAAGAAGAAAG | + |
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Preference number: 5 (lower is better) Translates to: TNPGGWPGGTAPSPR*GTHAGSCHRGGRRK Trigger: CTTTCTTCTTCCACCTCTATGGCATGATCCTGCGTGAGTGCCCCAGCGTGGAGAAGGTGCAGTGCCACCTGGCCAGCCTCCTGGATTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000176767.2 |
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| CDS CCA 90 bp | CCTCCTGAATATGCTGGGTCCCCAGAGCCAAGGTGGCCTGACTTATaGCCTGCTGGACACTCTTGGACTGGATGTTCGGCAGTTCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: PPEYAGSPEPRWPDL*PAGHSWTGCSAVPG Trigger: TCCAGGAACTGCCGAACATCCAGTCCAAGAGTGTCCAGCAGGCCATAAGTCAGGCCACCTTGGCTCTGGGGACCCAGCATATTCAGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
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| CDS CCA 90 bp | TCACCTCCACCACCTCCTGAATATGCTGGGTCCCCAGAGCCAAGGTaGCCTGACTTATGGCCTGCTGGACACTCTTGGACTGGATGTTCG | + |
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Preference number: 5 (lower is better) Translates to: SPPPPPEYAGSPEPR*PDLWPAGHSWTGCS Trigger: CGAACATCCAGTCCAAGAGTGTCCAGCAGGCCATAAGTCAGGCCACCTTGGCTCTGGGGACCCAGCATATTCAGGAGGTGGTGGAGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
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| CDS CCA 90 bp | CTGATGGCTGGCTGTCCTCTGTTGCAGCAACTGATTGCAGAAACTTaGTACGGCCCAGGTGCTCCAACAGGGCCCACACCTCCTCCAAGT | + |
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Preference number: 5 (lower is better) Translates to: LMAGCPLLQQLIAET*YGPGAPTGPTPPPS Trigger: ACTTGGAGGAGGTGTGGGCCCTGTTGGAGCACCTGGGCCGTACCAAGTTTCTGCAATCAGTTGCTGCAACAGAGGACAGCCAGCCATCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176767.2 |
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| CDS GCA 90 bp | ATGTTCGGCAGTTCCTGGAACAGGCCTTGCAAGAGCTCAGCTATCTaGTCCTTCCTGAAGCCAGGCTCCACACAGATCAGCAGCAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: MFGSSWNRPCKSSAI*SFLKPGSTQISSRS Trigger: GCTCCTGCTGCTGATCTGTGTGGAGCCTGGCTTCAGGAAGGAGCAGATAGCTGAGCTCTTGCAAGGCCTGTTCCAGGAACTGCCGAACAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
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| CDS CCA 90 bp | TCTCATCCTGGCTGTCCTCTGTTGCAGCAACTGATTGCAGAAACTTaGTACGGCCCAGGTGCTCCAACAGGGCCCACACCTCCTCCAAGT | + |
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Preference number: 5 (lower is better) Translates to: SHPGCPLLQQLIAET*YGPGAPTGPTPPPS Trigger: ACTTGGAGGAGGTGTGGGCCCTGTTGGAGCACCTGGGCCGTACCAAGTTTCTGCAATCAGTTGCTGCAACAGAGGACAGCCAGGATGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
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| CDS CCA 90 bp | AAATGGTGCCCAGAGCCATCAGCGAGACCAGCCGGGCTCGATATGTaGACTGGAGGAGCCTTCTTGGTGGGCGCAGTTTCAGCTTTATGT | + |
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Preference number: 5 (lower is better) Translates to: KWCPEPSARPAGLDM*TGGAFLVGAVSALC Trigger: ACATAAAGCTGAAACTGCGCCCACCAAGAAGGCTCCTCCAGTCCACATATCGAGCCCGGCTGGTCTCGCTGATGGCTCTGGGCACCATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
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| CDS CCA 90 bp | CGCAGTTATAGTGAGCCATGGCCCTGGCCAAAAGGGTCACTCCCTTaGGGAAAGTTTCCAACTGCCCGAAGAGCTCCCAGCCCTGGATTA | + |
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Preference number: 5 (lower is better) Translates to: RSYSEPWPWPKGSLP*GKFPTARRAPSPGL Trigger: TAATCCAGGGCTGGGAGCTCTTCGGGCAGTTGGAAACTTTCCCCAAGGGAGTGACCCTTTTGGCCAGGGCCATGGCTCACTATAACTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
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| CDS GCA 90 bp | ATGGCCCTGGCCAAAAGGGTCACTCCCTTGGGGAAAGTTTCCAACTaGCCGAAGAGCTCCCAGCCCTGGATTAGCTTCACATCAGCAAAC | + |
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Preference number: 5 (lower is better) Translates to: MALAKRVTPLGKVSN*PKSSQPWISFTSAN Trigger: GTTTGCTGATGTGAAGCTAATCCAGGGCTGGGAGCTCTTCGGGCAGTTGGAAACTTTCCCCAAGGGAGTGACCCTTTTGGCCAGGGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
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| CDS CCA 90 bp | GTTGGGCTCTTTCTGGAGGATGCCCAAGAGGCACTGGATGAGCTCTaGTGTCTGTGTGAACTTGTACCTCTGGGAGCTGTACTCTGCCTG | + |
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Preference number: 5 (lower is better) Translates to: VGLFLEDAQEALDEL*CLCELVPLGAVLCL Trigger: CAGGCAGAGTACAGCTCCCAGAGGTACAAGTTCACACAGACACCAGAGCTCATCCAGTGCCTCTTGGGCATCCTCCAGAAAGAGCCCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 ENSMUST00000176767.2 |
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| CDS CCA 90 bp | AGCAGACTGTGTTCCGGTACTCCTTGGTATAGAGGAGCTCATAAATaGTGCCCAGAGCCATCAGCGAGACCAGCCGGGCTCGATATGTGG | + |
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Preference number: 5 (lower is better) Translates to: SRLCSGTPWYRGAHK*CPEPSARPAGLDMW Trigger: CCACATATCGAGCCCGGCTGGTCTCGCTGATGGCTCTGGGCACCATTTATGAGCTCCTCTATACCAAGGAGTACCGGAACACAGTCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
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| CDS CCA 90 bp | GAAGGATGCCCGAGAAGGCCCAGCAGACTGTGTTCCGGTACTCCTTaGTATAGAGGAGCTCATAAATGGTGCCCAGAGCCATCAGCGAGA | + |
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Preference number: 5 (lower is better) Translates to: EGCPRRPSRLCSGTP*YRGAHKWCPEPSAR Trigger: TCTCGCTGATGGCTCTGGGCACCATTTATGAGCTCCTCTATACCAAGGAGTACCGGAACACAGTCTGCTGGGCCTTCTCGGGCATCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
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| CDS GCA 90 bp | CGACTGCGCTCATGGATCTTGTCAGACATCAGCCAGTATTCTATGTaGTGCAGGAGGAAGCAGACCTCGTCCATGCTCGGGTTCTCGGAA | + |
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Preference number: 5 (lower is better) Translates to: RLRSWILSDISQYSM*CRRKQTSSMLGFSE Trigger: TTCCGAGAACCCGAGCATGGACGAGGTCTGCTTCCTCCTGCAGCACATAGAATACTGGCTGATGTCTGACAAGATCCATGAGCGCAGTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 ENSMUST00000176767.2 |
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| CDS GCA 90 bp | AGACTGTGTTCCGGTACTCCTTGGTATAGAGGAGCTCATAAATGGTaGCCAGAGCCATCAGCGAGACCAGCCGGGCTCGATATGTGGACT | + |
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Preference number: 5 (lower is better) Translates to: RLCSGTPWYRGAHKW*PEPSARPAGLDMWT Trigger: AGTCCACATATCGAGCCCGGCTGGTCTCGCTGATGGCTCTGGGCACCATTTATGAGCTCCTCTATACCAAGGAGTACCGGAACACAGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
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| CDS CCA 90 bp | CTTATGGCCTGCTGGACACTCTTGGACTGGATGTTCGGCAGTTCCTaGAACAGGCCTTGCAAGAGCTCAGCTATCTGCTCCTTCCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: LMACWTLLDWMFGSS*NRPCKSSAICSFLK Trigger: CTTCAGGAAGGAGCAGATAGCTGAGCTCTTGCAAGGCCTGTTCCAGGAACTGCCGAACATCCAGTCCAAGAGTGTCCAGCAGGCCATAAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
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| CDS CCA 90 bp | AGGCTGACAATTCCAATGCCCTGGGCACTTAGACAGTGCAGGAGGTaGCCCATGATCTTCATCAAGCCAGCAGGGTCCTTGAACTCAGGT | + |
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Preference number: 5 (lower is better) Translates to: RLTIPMPWALRQCRR*PMIFIKPAGSLNSG Trigger: ACCTGAGTTCAAGGACCCTGCTGGCTTGATGAAGATCATGGGCCACCTCCTGCACTGTCTAAGTGCCCAGGGCATTGGAATTGTCAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
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| CDS CCA 90 bp | AGCAGGATGGTCGCAGAGAGGAAGCTGGACTTCAGGATCTCATCCTaGCTGTCCTCTGTTGCAGCAACTGATTGCAGAAACTTGGTACGG | + |
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Preference number: 5 (lower is better) Translates to: SRMVAERKLDFRISS*LSSVAATDCRNLVR Trigger: CCGTACCAAGTTTCTGCAATCAGTTGCTGCAACAGAGGACAGCCAGGATGAGATCCTGAAGTCCAGCTTCCTCTCTGCGACCATCCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
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| CDS GCA 90 bp | CTGGGCCGCAGGTTACTCAGGCCTATGATGACCAGTATGATCTTCTaGCGTAAGAAATTGGTCAGGGAGTTGGGCTCTTTCTGGAGGATG | + |
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Preference number: 5 (lower is better) Translates to: LGRRLLRPMMTSMIF*RKKLVRELGSFWRM Trigger: CATCCTCCAGAAAGAGCCCAACTCCCTGACCAATTTCTTACGGCAGAAGATCATACTGGTCATCATAGGCCTGAGTAACCTGCGGCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 ENSMUST00000176767.2 |
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| CDS GCA 90 bp | AACAGCTCCATCAACTTACTTCTTAGCAGAGTTGCCTTTTTAGGGTaGATCAGGGTGCTGCCCAGTCCCTTCAAGCTCATAGCCCGCACC | + |
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Preference number: 5 (lower is better) Translates to: NSSINLLLSRVAFLG*IRVLPSPFKLIART Trigger: GGTGCGGGCTATGAGCTTGAAGGGACTGGGCAGCACCCTGATGCACCCTAAAAAGGCAACTCTGCTAAGAAGTAAGTTGATGGAGCTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
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| CDS GCA 90 bp | GAAAGGCCCAGGTTCAGGGAGTTGTACATGGTCTTCCAAGACATGTaGTGGGAGACATCTGGGCTGTTGAGAAACTCAGTGATGATGCAG | + |
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Preference number: 5 (lower is better) Translates to: ERPRFRELYMVFQDM*WETSGLLRNSVMMQ Trigger: CTGCATCATCACTGAGTTTCTCAACAGCCCAGATGTCTCCCAGCACATGTCTTGGAAGACCATGTACAACTCCCTGAACCTGGGCCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
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| CDS CCA 90 bp | AGGCCCAGGTTCAGGGAGTTGTACATGGTCTTCCAAGACATGTGCTaGGAGACATCTGGGCTGTTGAGAAACTCAGTGATGATGCAGATG | + |
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Preference number: 5 (lower is better) Translates to: RPRFRELYMVFQDMC*ETSGLLRNSVMMQM Trigger: CATCTGCATCATCACTGAGTTTCTCAACAGCCCAGATGTCTCCCAGCACATGTCTTGGAAGACCATGTACAACTCCCTGAACCTGGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
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| CDS GCA 90 bp | GTCATTGAAATAGTCCTGAAGCAATGCCCCGATGAACTTCATGGCTaGCAGCTTCACTGTCATGTGGGAACTGTCCAGATACGTCAAGGC | + |
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Preference number: 5 (lower is better) Translates to: VIEIVLKQCPDELHG*QLHCHVGTVQIRQG Trigger: GCCTTGACGTATCTGGACAGTTCCCACATGACAGTGAAGCTGGCAGCCATGAAGTTCATCGGGGCATTGCTTCAGGACTATTTCAATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
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| CDS CCA 90 bp | CAGGGAGTTGTACATGGTCTTCCAAGACATGTGCTGGGAGACATCTaGGCTGTTGAGAAACTCAGTGATGATGCAGATGCCCACAATGTT | + |
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Preference number: 5 (lower is better) Translates to: QGVVHGLPRHVLGDI*AVEKLSDDADAHNV Trigger: AACATTGTGGGCATCTGCATCATCACTGAGTTTCTCAACAGCCCAGATGTCTCCCAGCACATGTCTTGGAAGACCATGTACAACTCCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
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| CDS CCA 90 bp | AGCTGGTTTTCCTTCTCTAGGAAGTGGCAGATGGTGTCTAGTACTTaGCCCTGCTCCATGACCATCATGTTCTTGATCTTATTGACCACC | + |
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Preference number: 5 (lower is better) Translates to: SWFSFSRKWQMVSST*PCSMTIMFLILLTT Trigger: GGTGGTCAATAAGATCAAGAACATGATGGTCATGGAGCAGGGCCAAGTACTAGACACCATCTGCCACTTCCTAGAGAAGGAAAACCAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023271.8 |
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| CDS CCA 90 bp | TCAACAGAAGGATTCCAGAATGAGACCTCTGGCTTTTCCCAGAGCTaGTTTTCCTTCTCTAGGAAGTGGCAGATGGTGTCTAGTACTTGG | + |
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Preference number: 5 (lower is better) Translates to: STEGFQNETSGFSQS*FSFSRKWQMVSSTW Trigger: CCAAGTACTAGACACCATCTGCCACTTCCTAGAGAAGGAAAACCAGCTCTGGGAAAAGCCAGAGGTCTCATTCTGGAATCCTTCTGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023271.8 |
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| CDS CAA 90 bp | GTACGGCCCAGGTGCTCCAACAGGGCCCACACCTCCTCCAAGTGCTaGGTGGAGGCCAGGCCCACAGCCAGTGCAATGCCCTCCCGCTGT | + |
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Preference number: 6 (lower is better) Translates to: VRPRCSNRAHTSSKC*VEARPTASAMPSRC Trigger: ACAGCGGGAGGGCATTGCACTGGCTGTGGGCCTGGCCTCCACCAAGCACTTGGAGGAGGTGTGGGCCCTGTTGGAGCACCTGGGCCGTAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 ENSMUST00000176767.2 |
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| CDS TCA 72 bp | GCACTAGGCCCACCTCCAGCAGGTAGTAGAGCTCTGTaGGGAGGCCCAGAAGGATGCCCGAGAAGGCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: ALGPPPAGSRAL*GGPEGCPRRPS Trigger: GCTGGGCCTTCTCGGGCATCCTTCTGGGCCTCCTCACAGAGCTCTACTACCTGCTGGAGGTGGGCCTAGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
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| CDS GCA 72 bp | CTCCAAGTGCTTGGTGGAGGCCAGGCCCACAGCCAGTaGAATGCCCTCCCGCTGTCTGGAGTGCTGATGGGA | + |
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Preference number: 6 (lower is better) Translates to: LQVLGGGQAHSQ*NALPLSGVLMG Trigger: TCCCATCAGCACTCCAGACAGCGGGAGGGCATTGCACTGGCTGTGGGCCTGGCCTCCACCAAGCACTTGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 ENSMUST00000176767.2 |
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| CDS CCA 72 bp | GCTGTCTGGAGTGCTGATGGGACAAATCCAGGAGGCTaGCCAGGTGGCACTGCACCTTCTCCACGCTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: AVWSADGTNPGG*PGGTAPSPRWG Trigger: GCCCCAGCGTGGAGAAGGTGCAGTGCCACCTGGCCAGCCTCCTGGATTTGTCCCATCAGCACTCCAGACAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 ENSMUST00000176767.2 |
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| CDS CCA 72 bp | CCAGGCCCACAGCCAGTGCAATGCCCTCCCGCTGTCTaGAGTGCTGATGGGACAAATCCAGGAGGCTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: PGPQPVQCPPAV*SADGTNPGGWP Trigger: TGGCCAGCCTCCTGGATTTGTCCCATCAGCACTCCAGACAGCGGGAGGGCATTGCACTGGCTGTGGGCCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 ENSMUST00000176767.2 |
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| CDS GCA 72 bp | AGTGCTTGGTGGAGGCCAGGCCCACAGCCAGTGCAATaGCCTCCCGCTGTCTGGAGTGCTGATGGGACAAAT | + |
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Preference number: 6 (lower is better) Translates to: SAWWRPGPQPVQ*PPAVWSADGTN Trigger: ATTTGTCCCATCAGCACTCCAGACAGCGGGAGGGCATTGCACTGGCTGTGGGCCTGGCCTCCACCAAGCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 ENSMUST00000176767.2 |
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| CDS CCA 72 bp | CCAGAGCCATCAGCGAGACCAGCCGGGCTCGATATGTaGACTGGAGGAGCCTTCTTGGTGGGCGCAGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: PEPSARPAGLDM*TGGAFLVGAVS Trigger: TGAAACTGCGCCCACCAAGAAGGCTCCTCCAGTCCACATATCGAGCCCGGCTGGTCTCGCTGATGGCTCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
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| CDS CCA 72 bp | GCCATCAGCGAGACCAGCCGGGCTCGATATGTGGACTaGAGGAGCCTTCTTGGTGGGCGCAGTTTCAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: AISETSRARYVD*RSLLGGRSFSF Trigger: AAAGCTGAAACTGCGCCCACCAAGAAGGCTCCTCCAGTCCACATATCGAGCCCGGCTGGTCTCGCTGATGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
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| CDS CAA 90 bp | TCTGATGGCTGGCTGTCCTCTGTTGCAGCAACTGATTGCAGAAACTaGGTACGGCCCAGGTGCTCCAACAGGGCCCACACCTCCTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: SDGWLSSVAATDCRN*VRPRCSNRAHTSSK Trigger: CTTGGAGGAGGTGTGGGCCCTGTTGGAGCACCTGGGCCGTACCAAGTTTCTGCAATCAGTTGCTGCAACAGAGGACAGCCAGCCATCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176767.2 |
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| CDS TCA 72 bp | ACCTCTGGGAGCTGTACTCTGCCTGGAGCGATCTGGTaGGCAGGATGGTCGCAGAGAGGAAGCTGGACTTCA | + |
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Preference number: 6 (lower is better) Translates to: TSGSCTLPGAIW*AGWSQRGSWTS Trigger: TGAAGTCCAGCTTCCTCTCTGCGACCATCCTGCTCACCAGATCGCTCCAGGCAGAGTACAGCTCCCAGAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 ENSMUST00000176767.2 |
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| CDS GCA 72 bp | GCAGCAACTGATTGCAGAAACTTGGTACGGCCCAGGTaGTCCAACAGGGCCCACACCTCCTCCAAGTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: AATDCRNLVRPR*SNRAHTSSKCL Trigger: CAAGCACTTGGAGGAGGTGTGGGCCCTGTTGGAGCACCTGGGCCGTACCAAGTTTCTGCAATCAGTTGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 ENSMUST00000176767.2 |
||
| CDS GCA 72 bp | CATTTGCAGCGCCCAGCCCTTGGCCCCATGCCAGCTTaGCAAACAGCTCCTTCCGGAACTCCCACTTTAACA | + |
|
Preference number: 6 (lower is better) Translates to: HLQRPALGPMPA*QTAPSGTPTLT Trigger: TGTTAAAGTGGGAGTTCCGGAAGGAGCTGTTTGGCAAGCTGGCATGGGGCCAAGGGCTGGGCGCTGCAAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
||
| CDS CCA 72 bp | TATGCTGGGTCCCCAGAGCCAAGGTGGCCTGACTTATaGCCTGCTGGACACTCTTGGACTGGATGTTCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: YAGSPEPRWPDL*PAGHSWTGCSA Trigger: TGCCGAACATCCAGTCCAAGAGTGTCCAGCAGGCCATAAGTCAGGCCACCTTGGCTCTGGGGACCCAGCATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
||
| CDS CCA 72 bp | CCACCTCCTGAATATGCTGGGTCCCCAGAGCCAAGGTaGCCTGACTTATGGCCTGCTGGACACTCTTGGACT | + |
|
Preference number: 6 (lower is better) Translates to: PPPEYAGSPEPR*PDLWPAGHSWT Trigger: AGTCCAAGAGTGTCCAGCAGGCCATAAGTCAGGCCACCTTGGCTCTGGGGACCCAGCATATTCAGGAGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
||
| CDS CAA 72 bp | TCATTTGCAGCGCCCAGCCCTTGGCCCCATGCCAGCTaGCCAAACAGCTCCTTCCGGAACTCCCACTTTAAC | + |
|
Preference number: 6 (lower is better) Translates to: SFAAPSPWPHAS*PNSSFRNSHFN Trigger: GTTAAAGTGGGAGTTCCGGAAGGAGCTGTTTGGCAAGCTGGCATGGGGCCAAGGGCTGGGCGCTGCAAATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
||
| CDS CAA 90 bp | ATCTCATCCTGGCTGTCCTCTGTTGCAGCAACTGATTGCAGAAACTaGGTACGGCCCAGGTGCTCCAACAGGGCCCACACCTCCTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: ISSWLSSVAATDCRN*VRPRCSNRAHTSSK Trigger: CTTGGAGGAGGTGTGGGCCCTGTTGGAGCACCTGGGCCGTACCAAGTTTCTGCAATCAGTTGCTGCAACAGAGGACAGCCAGGATGAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
||
| CDS CAA 90 bp | ACATCAGCAAACACTTCCCAGTATTCGGTGGTCCAGAAGAGGCCCTaGAGTGCTTCCAAGCAGATCCTGCAGGGCCCGAGGGGCTTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: TSANTSQYSVVQKRP*SASKQILQGPRGLE Trigger: CTCTAAGCCCCTCGGGCCCTGCAGGATCTGCTTGGAAGCACTCAAGGGCCTCTTCTGGACCACCGAATACTGGGAAGTGTTTGCTGATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
||
| CDS GCA 72 bp | AAAAATGTCATTTGCAGCGCCCAGCCCTTGGCCCCATaGCAGCTTGCCAAACAGCTCCTTCCGGAACTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: KNVICSAQPLAP*QLAKQLLPELP Trigger: TGGGAGTTCCGGAAGGAGCTGTTTGGCAAGCTGGCATGGGGCCAAGGGCTGGGCGCTGCAAATGACATTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
||
| CDS CCA 72 bp | TGCTGGGCGATCTTGAGGCTGACAATTCCAATGCCCTaGGCACTTAGACAGTGCAGGAGGTGGCCCATGATC | + |
|
Preference number: 6 (lower is better) Translates to: CWAILRLTIPMP*ALRQCRRWPMI Trigger: GATCATGGGCCACCTCCTGCACTGTCTAAGTGCCCAGGGCATTGGAATTGTCAGCCTCAAGATCGCCCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
||
| CDS GCA 72 bp | GCCAAAAGGGTCACTCCCTTGGGGAAAGTTTCCAACTaGCCGAAGAGCTCCCAGCCCTGGATTAGCTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: AKRVTPLGKVSN*PKSSQPWISFT Trigger: TGTGAAGCTAATCCAGGGCTGGGAGCTCTTCGGGCAGTTGGAAACTTTCCCCAAGGGAGTGACCCTTTTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
||
| CDS GCA 72 bp | TCTGATGGCTGGCTGTCCTCTGTTGCAGCAACTGATTaGAGAAACTTGGTACGGCCCAGGTGCTCCAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: SDGWLSSVAATD*RNLVRPRCSNR Trigger: CCTGTTGGAGCACCTGGGCCGTACCAAGTTTCTGCAATCAGTTGCTGCAACAGAGGACAGCCAGCCATCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176767.2 |
||
| CDS CCA 72 bp | TGGATGAGCTCTGGTGTCTGTGTGAACTTGTACCTCTaGGAGCTGTACTCTGCCTGGAGCGATCTGGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: WMSSGVCVNLYL*ELYSAWSDLVS Trigger: GCTCACCAGATCGCTCCAGGCAGAGTACAGCTCCCAGAGGTACAAGTTCACACAGACACCAGAGCTCATCCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 ENSMUST00000176767.2 |
||
| CDS CCA 72 bp | CCGAGAAGGCCCAGCAGACTGTGTTCCGGTACTCCTTaGTATAGAGGAGCTCATAAATGGTGCCCAGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PRRPSRLCSGTP*YRGAHKWCPEP Trigger: TGGCTCTGGGCACCATTTATGAGCTCCTCTATACCAAGGAGTACCGGAACACAGTCTGCTGGGCCTTCTCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
||
| CDS CCA 72 bp | GCTGCCCTTTCATCTGTGAACAGGCTGAGAAGGTGCTaGGCGATCTTGAGGCTGACAATTCCAATGCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AALSSVNRLRRC*AILRLTIPMPW Trigger: CCAGGGCATTGGAATTGTCAGCCTCAAGATCGCCCAGCACCTTCTCAGCCTGTTCACAGATGAAAGGGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
||
| CDS CAA 90 bp | CAGAGAGGAAGCTGGACTTCAGGATCTCATCCTGGCTGTCCTCTGTaGCAGCAACTGATTGCAGAAACTTGGTACGGCCCAGGTGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: QRGSWTSGSHPGCPL*QQLIAETWYGPGAP Trigger: TGGAGCACCTGGGCCGTACCAAGTTTCTGCAATCAGTTGCTGCAACAGAGGACAGCCAGGATGAGATCCTGAAGTCCAGCTTCCTCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
||
| CDS GCA 72 bp | ATCTCATCCTGGCTGTCCTCTGTTGCAGCAACTGATTaGAGAAACTTGGTACGGCCCAGGTGCTCCAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: ISSWLSSVAATD*RNLVRPRCSNR Trigger: CCTGTTGGAGCACCTGGGCCGTACCAAGTTTCTGCAATCAGTTGCTGCAACAGAGGACAGCCAGGATGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
||
| CDS CAA 72 bp | GCGCAGGAAGGTGAACCTGGCCTTCATAGCTACTTCTaGGCAGGGATCAGCCATATTGAAGAGGAGGGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: AQEGEPGLHSYF*AGISHIEEEGY Trigger: GTACCCCTCCTCTTCAATATGGCTGATCCCTGCCAAGAAGTAGCTATGAAGGCCAGGTTCACCTTCCTGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
||
| CDS CAA 72 bp | CATGTAGATAAAAATGTCATTTGCAGCGCCCAGCCCTaGGCCCCATGCCAGCTTGCCAAACAGCTCCTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: HVDKNVICSAQP*APCQLAKQLLP Trigger: CGGAAGGAGCTGTTTGGCAAGCTGGCATGGGGCCAAGGGCTGGGCGCTGCAAATGACATTTTTATCTACATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
||
| CDS TCA 72 bp | GGATCAGCCATATTGAAGAGGAGGGGTACTGTAGCCTaGGAAGCCACATCCTTGAGGCTCTGCCTAAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GSAILKRRGTVA*EATSLRLCLSF Trigger: GAAGCTTAGGCAGAGCCTCAAGGATGTGGCTTCTCAGGCTACAGTACCCCTCCTCTTCAATATGGCTGATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
||
| CDS GCA 72 bp | CTCGAGTCCTTGGCAGGAGGAAGCATATACACAGTCTaGAGACAGGTCTTCAGGATCTGGGACTTGAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LESLAGGSIYTV*RQVFRIWDLRR Trigger: CCTTCTCAAGTCCCAGATCCTGAAGACCTGTCTGCAGACTGTGTATATGCTTCCTCCTGCCAAGGACTCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 ENSMUST00000176767.2 |
||
| CDS GCA 72 bp | TCATGGATCTTGTCAGACATCAGCCAGTATTCTATGTaGTGCAGGAGGAAGCAGACCTCGTCCATGCTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: SWILSDISQYSM*CRRKQTSSMLG Trigger: CCCGAGCATGGACGAGGTCTGCTTCCTCCTGCAGCACATAGAATACTGGCTGATGTCTGACAAGATCCATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 ENSMUST00000176767.2 |
||
| CDS CCA 72 bp | GGCTTTTCCCAGAGCTGGTTTTCCTTCTCTAGGAAGTaGCAGATGGTGTCTAGTACTTGGCCCTGCTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: GFSQSWFSFSRK*QMVSSTWPCSM Trigger: CATGGAGCAGGGCCAAGTACTAGACACCATCTGCCACTTCCTAGAGAAGGAAAACCAGCTCTGGGAAAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023271.8 |
||
| CDS CCA 72 bp | GTCGCAGAGAGGAAGCTGGACTTCAGGATCTCATCCTaGCTGTCCTCTGTTGCAGCAACTGATTGCAGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: VAERKLDFRISS*LSSVAATDCRN Trigger: GTTTCTGCAATCAGTTGCTGCAACAGAGGACAGCCAGGATGAGATCCTGAAGTCCAGCTTCCTCTCTGCGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
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| CDS CCA 72 bp | ACCTCGTCCATGCTCGGGTTCTCGGAAATGAAGTTCTaGAGAAGAAGGTCGAGGGCACGTACTGTCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TSSMLGFSEMKF*RRRSRARTVFL Trigger: CAAGAAGACAGTACGTGCCCTCGACCTTCTTCTCCAGAACTTCATTTCCGAGAACCCGAGCATGGACGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 ENSMUST00000176767.2 |
||
| CDS CCA 72 bp | CGCAGGAAGGTGAACCTGGCCTTCATAGCTACTTCTTaGCAGGGATCAGCCATATTGAAGAGGAGGGGTACT | + |
|
Preference number: 6 (lower is better) Translates to: RRKVNLAFIATS*QGSAILKRRGT Trigger: AGTACCCCTCCTCTTCAATATGGCTGATCCCTGCCAAGAAGTAGCTATGAAGGCCAGGTTCACCTTCCTGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
||
| CDS CAA 72 bp | AGCTGGACTTCAGGATCTCATCCTGGCTGTCCTCTGTaGCAGCAACTGATTGCAGAAACTTGGTACGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SWTSGSHPGCPL*QQLIAETWYGP Trigger: TGGGCCGTACCAAGTTTCTGCAATCAGTTGCTGCAACAGAGGACAGCCAGGATGAGATCCTGAAGTCCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
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| CDS CAA 72 bp | TACACAGTCTGCAGACAGGTCTTCAGGATCTGGGACTaGAGAAGGGGTTTGAATCTGGGCCGCAGGTTACTC | + |
|
Preference number: 6 (lower is better) Translates to: YTVCRQVFRIWD*RRGLNLGRRLL Trigger: GAGTAACCTGCGGCCCAGATTCAAACCCCTTCTCAAGTCCCAGATCCTGAAGACCTGTCTGCAGACTGTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 ENSMUST00000176767.2 |
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| CDS CAA 72 bp | TCCATCGAAGGTTGTCTGATGGCTGGCTGTCCTCTGTaGCAGCAACTGATTGCAGAAACTTGGTACGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SIEGCLMAGCPL*QQLIAETWYGP Trigger: TGGGCCGTACCAAGTTTCTGCAATCAGTTGCTGCAACAGAGGACAGCCAGCCATCAGACAACCTTCGATGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176767.2 |
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| CDS CAA 90 bp | ATAAAAATGTCATTTGCAGCGCCCAGCCCTTGGCCCCATGCCAGCTaGCCAAACAGCTCCTTCCGGAACTCCCACTTTAACAAGATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: IKMSFAAPSPWPHAS*PNSSFRNSHFNKMA Trigger: TGCCATCTTGTTAAAGTGGGAGTTCCGGAAGGAGCTGTTTGGCAAGCTGGCATGGGGCCAAGGGCTGGGCGCTGCAAATGACATTTTTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
||
| CDS CCA 72 bp | GGGAAAGTTTCCAACTGCCCGAAGAGCTCCCAGCCCTaGATTAGCTTCACATCAGCAAACACTTCCCAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: GKVSNCPKSSQP*ISFTSANTSQY Trigger: ATACTGGGAAGTGTTTGCTGATGTGAAGCTAATCCAGGGCTGGGAGCTCTTCGGGCAGTTGGAAACTTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
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| CDS CAA 72 bp | AGTATGATCTTCTGCCGTAAGAAATTGGTCAGGGAGTaGGGCTCTTTCTGGAGGATGCCCAAGAGGCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: SMIFCRKKLVRE*GSFWRMPKRHW Trigger: CCAGTGCCTCTTGGGCATCCTCCAGAAAGAGCCCAACTCCCTGACCAATTTCTTACGGCAGAAGATCATACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 ENSMUST00000176767.2 |
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| CDS CAA 72 bp | GGCCTCTTTAGCAAGCTTCAAAGAGTCCACCACATATaGCAGAAGCAGGTAGATGGACTGGACAGCCCGACT | + |
|
Preference number: 6 (lower is better) Translates to: GLFSKLQRVHHI*QKQVDGLDSPT Trigger: AGTCGGGCTGTCCAGTCCATCTACCTGCTTCTGCAATATGTGGTGGACTCTTTGAAGCTTGCTAAAGAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 ENSMUST00000176767.2 |
||
| CDS CAA 72 bp | AGGTGGCCCATGATCTTCATCAAGCCAGCAGGGTCCTaGAACTCAGGTTGTAGAAAGTTGTCCAACAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RWPMIFIKPAGS*NSGCRKLSNSS Trigger: GGAGCTGTTGGACAACTTTCTACAACCTGAGTTCAAGGACCCTGCTGGCTTGATGAAGATCATGGGCCACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
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| CDS CAA 90 bp | TTACTCAGGCCTATGATGACCAGTATGATCTTCTGCCGTAAGAAATaGGTCAGGGAGTTGGGCTCTTTCTGGAGGATGCCCAAGAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LLRPMMTSMIFCRKK*VRELGSFWRMPKRH Trigger: GTGCCTCTTGGGCATCCTCCAGAAAGAGCCCAACTCCCTGACCAATTTCTTACGGCAGAAGATCATACTGGTCATCATAGGCCTGAGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 ENSMUST00000176767.2 |
||
| CDS GCA 72 bp | AGGTTCAGGGAGTTGTACATGGTCTTCCAAGACATGTaGTGGGAGACATCTGGGCTGTTGAGAAACTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: RFRELYMVFQDM*WETSGLLRNSV Trigger: CACTGAGTTTCTCAACAGCCCAGATGTCTCCCAGCACATGTCTTGGAAGACCATGTACAACTCCCTGAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
||
| CDS GCA 72 bp | ATAGTCCTGAAGCAATGCCCCGATGAACTTCATGGCTaGCAGCTTCACTGTCATGTGGGAACTGTCCAGATA | + |
|
Preference number: 6 (lower is better) Translates to: IVLKQCPDELHG*QLHCHVGTVQI Trigger: TATCTGGACAGTTCCCACATGACAGTGAAGCTGGCAGCCATGAAGTTCATCGGGGCATTGCTTCAGGACTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
||
| CDS CCA 72 bp | GGATTCCAGAATGAGACCTCTGGCTTTTCCCAGAGCTaGTTTTCCTTCTCTAGGAAGTGGCAGATGGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GFQNETSGFSQS*FSFSRKWQMVS Trigger: AGACACCATCTGCCACTTCCTAGAGAAGGAAAACCAGCTCTGGGAAAAGCCAGAGGTCTCATTCTGGAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023271.8 |
||
| CDS CCA 72 bp | GTACATGGTCTTCCAAGACATGTGCTGGGAGACATCTaGGCTGTTGAGAAACTCAGTGATGATGCAGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: VHGLPRHVLGDI*AVEKLSDDADA Trigger: GGCATCTGCATCATCACTGAGTTTCTCAACAGCCCAGATGTCTCCCAGCACATGTCTTGGAAGACCATGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
||
| CDS CAA 72 bp | CCTATGATGACCAGTATGATCTTCTGCCGTAAGAAATaGGTCAGGGAGTTGGGCTCTTTCTGGAGGATGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PMMTSMIFCRKK*VRELGSFWRMP Trigger: GGGCATCCTCCAGAAAGAGCCCAACTCCCTGACCAATTTCTTACGGCAGAAGATCATACTGGTCATCATAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 ENSMUST00000176767.2 |
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| CDS TCA 72 bp | CCACCAATTTCCCCTTCTGCTGGAAAACAAGCTCCATaGGCAGGTAAACACAGAAGTGAGAATGCTGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PPISPSAGKQAP*AGKHRSENAAV Trigger: CACAGCAGCATTCTCACTTCTGTGTTTACCTGCTCATGGAGCTTGTTTTCCAGCAGAAGGGGAAATTGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 ENSMUST00000176767.2 |
||
| CDS CCA 72 bp | CTTGCTCCACTGAAAATAAGTCATTCCTCGAGTCCTTaGCAGGAGGAAGCATATACACAGTCTGCAGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: LAPLKISHSSSP*QEEAYTQSADR Trigger: CCTGTCTGCAGACTGTGTATATGCTTCCTCCTGCCAAGGACTCGAGGAATGACTTATTTTCAGTGGAGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 ENSMUST00000176767.2 |
||
| CDS CCA 72 bp | TTCAGGGAGTTGTACATGGTCTTCCAAGACATGTGCTaGGAGACATCTGGGCTGTTGAGAAACTCAGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: FRELYMVFQDMC*ETSGLLRNSVM Trigger: CATCACTGAGTTTCTCAACAGCCCAGATGTCTCCCAGCACATGTCTTGGAAGACCATGTACAACTCCCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
||
| CDS CAA 72 bp | GCTTGCTCCACTGAAAATAAGTCATTCCTCGAGTCCTaGGCAGGAGGAAGCATATACACAGTCTGCAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: ACSTENKSFLES*AGGSIYTVCRQ Trigger: CTGTCTGCAGACTGTGTATATGCTTCCTCCTGCCAAGGACTCGAGGAATGACTTATTTTCAGTGGAGCAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 ENSMUST00000176767.2 |
||
| CDS CAA 72 bp | TTGAGAAACTCAGTGATGATGCAGATGCCCACAATGTaGTCTCGCTCTTCGCTGCTCTTCAGGGAGATGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LRNSVMMQMPTM*SRSSLLFREMR Trigger: TCTCATCTCCCTGAAGAGCAGCGAAGAGCGAGACAACATTGTGGGCATCTGCATCATCACTGAGTTTCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
||
| CDS CAA 90 bp | AGGTGGAAGAAGAAAGCCTTATCAGTAGCCTTCCTGGGGTCCAGGTaGAGAAACTCTAGGAGCTTTTCAACAGAAGGATTCCAGAATGAG | + |
|
Preference number: 6 (lower is better) Translates to: RWKKKALSVAFLGSR*RNSRSFSTEGFQNE Trigger: CTCATTCTGGAATCCTTCTGTTGAAAAGCTCCTAGAGTTTCTCAACCTGGACCCCAGGAAGGCTACTGATAAGGCTTTCTTCTTCCACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023271.8 |
||
| CDS GCA 72 bp | ATCAACTTACTTCTTAGCAGAGTTGCCTTTTTAGGGTaGATCAGGGTGCTGCCCAGTCCCTTCAAGCTCATA | + |
|
Preference number: 6 (lower is better) Translates to: INLLLSRVAFLG*IRVLPSPFKLI Trigger: TATGAGCTTGAAGGGACTGGGCAGCACCCTGATGCACCCTAAAAAGGCAACTCTGCTAAGAAGTAAGTTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
||
| CDS CCA 72 bp | TCCTTCTCTAGGAAGTGGCAGATGGTGTCTAGTACTTaGCCCTGCTCCATGACCATCATGTTCTTGATCTTA | + |
|
Preference number: 6 (lower is better) Translates to: SFSRKWQMVSST*PCSMTIMFLIL Trigger: TAAGATCAAGAACATGATGGTCATGGAGCAGGGCCAAGTACTAGACACCATCTGCCACTTCCTAGAGAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023271.8 |
||
| CDS CAA 72 bp | AAGAAAGCCTTATCAGTAGCCTTCCTGGGGTCCAGGTaGAGAAACTCTAGGAGCTTTTCAACAGAAGGATTC | + |
|
Preference number: 6 (lower is better) Translates to: KKALSVAFLGSR*RNSRSFSTEGF Trigger: GAATCCTTCTGTTGAAAAGCTCCTAGAGTTTCTCAACCTGGACCCCAGGAAGGCTACTGATAAGGCTTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023271.8 |
||
| CDS CAA 72 bp | AAGCCAGCAGGGTCCTTGAACTCAGGTTGTAGAAAGTaGTCCAACAGCTCCATCAACTTACTTCTTAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: KPAGSLNSGCRK*SNSSINLLLSR Trigger: TCTGCTAAGAAGTAAGTTGATGGAGCTGTTGGACAACTTTCTACAACCTGAGTTCAAGGACCCTGCTGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
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| CDS CAA 90 bp | ATCTTCATCAAGCCAGCAGGGTCCTTGAACTCAGGTTGTAGAAAGTaGTCCAACAGCTCCATCAACTTACTTCTTAGCAGAGTTGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: IFIKPAGSLNSGCRK*SNSSINLLLSRVAF Trigger: AAAGGCAACTCTGCTAAGAAGTAAGTTGATGGAGCTGTTGGACAACTTTCTACAACCTGAGTTCAAGGACCCTGCTGGCTTGATGAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023271.8 ENSMUST00000137963.8 |
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