RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MROH2A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000079429

Ensembl transcript IDs: ENSMUST00000061013.13, ENSMUST00000113130.8, ENSMUST00000135948.2

Found 592 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGAGGAGGAAGAGGCCTACAGGGCTGAAGCTGCCCTTTGCCCCGTaGTTGGCTCTGGGATGTGATGGCCACACAGCCAGGAGCCTGCAC +
Preference number: 1 (lower is better)
Translates to: LRRKRPTGLKLPFAP*LALGCDGHTARSLH
Trigger: GTGCAGGCTCCTGGCTGTGTGGCCATCACATCCCAGAGCCAACCACGGGGCAAAGGGCAGCTTCAGCCCTGTAGGCCTCTTCCTCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR CCA 90 bp AACACAGGGGTCCGGAATCCCCTAGTGGAGGAGGCTGAGCTGGCCTaGGCAAGGGTGGAAGTCGAGTATCTGAGCGCTGCTAAAGGAGCC +
Preference number: 1 (lower is better)
Translates to: NTGVRNPLVEEAELA*ARVEVEYLSAAKGA
Trigger: GGCTCCTTTAGCAGCGCTCAGATACTCGACTTCCACCCTTGCCCAGGCCAGCTCAGCCTCCTCCACTAGGGGATTCCGGACCCCTGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR CCA 90 bp GGAGGTGTGTCCCCAGGTAGTAGCACTGGTAGATGCGTGCACCTGTaGGCTGAGGTTGATTTCCCAGAGTGGTTACAAAAGCCCAGGCCT +
Preference number: 1 (lower is better)
Translates to: GGVSPGSSTGRCVHL*AEVDFPEWLQKPRP
Trigger: AGGCCTGGGCTTTTGTAACCACTCTGGGAAATCAACCTCAGCCCACAGGTGCACGCATCTACCAGTGCTACTACCTGGGGACACACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR TCA 90 bp TGGAGGAGGCTGAGCTGGCCTGGGCAAGGGTGGAAGTCGAGTATCTaGGCGCTGCTAAAGGAGCCGCTAACTGATAACTTCTCTGCTTTT +
Preference number: 1 (lower is better)
Translates to: WRRLSWPGQGWKSSI*ALLKEPLTDNFSAF
Trigger: AAAAGCAGAGAAGTTATCAGTTAGCGGCTCCTTTAGCAGCGCTCAGATACTCGACTTCCACCCTTGCCCAGGCCAGCTCAGCCTCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR GCA 90 bp TACCGTCTCCCAGGTGTAGCGCTTCACAGTGTCTATGCATGCATCTaGCTTTTTGCTTTAGGAACAAGGTCCCTGGGGACAGGCTGGGCA +
Preference number: 1 (lower is better)
Translates to: YRLPGVALHSVYACI*LFALGTRSLGTGWA
Trigger: TGCCCAGCCTGTCCCCAGGGACCTTGTTCCTAAAGCAAAAAGGCAGATGCATGCATAGACACTGTGAAGCGCTACACCTGGGAGACGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR TCA 90 bp AGCGGAAAGGTTGCAGAAATCACCGCTGTGAGAAGCCTCAGCAAGTaGATTGCTTCAGACAGGGTGAGCATCTCTCCTGTGGAGGTGCTG +
Preference number: 1 (lower is better)
Translates to: SGKVAEITAVRSLSK*IASDRVSISPVEVL
Trigger: CAGCACCTCCACAGGAGAGATGCTCACCCTGTCTGAAGCAATTCACTTGCTGAGGCTTCTCACAGCGGTGATTTCTGCAACCTTTCCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR TCA 90 bp TTGTTTGCAAGTGGTGCCTGCTCTGCCCCCACATATCCTCATATCTaGCACCAGGCCCTCACCAGATCTCTCGTCTACCACAAGAGTTGG +
Preference number: 1 (lower is better)
Translates to: LFASGACSAPTYPHI*HQALTRSLVYHKSW
Trigger: CCAACTCTTGTGGTAGACGAGAGATCTGGTGAGGGCCTGGTGTCAGATATGAGGATATGTGGGGGCAGAGCAGGCACCACTTGCAAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR GCA 90 bp CCCAGGTGTAGCGCTTCACAGTGTCTATGCATGCATCTGCCTTTTTaGTTTAGGAACAAGGTCCCTGGGGACAGGCTGGGCAGTAGTTTG +
Preference number: 1 (lower is better)
Translates to: PRCSASQCLCMHLPF*FRNKVPGDRLGSSL
Trigger: CAAACTACTGCCCAGCCTGTCCCCAGGGACCTTGTTCCTAAAGCAAAAAGGCAGATGCATGCATAGACACTGTGAAGCGCTACACCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR CCA 90 bp GGATGTGATGGCCACACAGCCAGGAGCCTGCACTCGGGAGAGCAGTaGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTT +
Preference number: 1 (lower is better)
Translates to: GCDGHTARSLHSGEQ*RYISEGEESWIPIL
Trigger: AAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCTCCCGAGTGCAGGCTCCTGGCTGTGTGGCCATCACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR GCA 90 bp AAAGGTTGCAGAAATCACCGCTGTGAGAAGCCTCAGCAAGTGAATTaGTTCAGACAGGGTGAGCATCTCTCCTGTGGAGGTGCTGCCTTG +
Preference number: 1 (lower is better)
Translates to: KGCRNHRCEKPQQVN*FRQGEHLSCGGAAL
Trigger: CAAGGCAGCACCTCCACAGGAGAGATGCTCACCCTGTCTGAAGCAATTCACTTGCTGAGGCTTCTCACAGCGGTGATTTCTGCAACCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR CCA 90 bp GCACAGCCAGAGTCGTCGGTACCAGCACTTCTCTATTTACTCTATTaGAGCGGAAAGGTTGCAGAAATCACCGCTGTGAGAAGCCTCAGC +
Preference number: 1 (lower is better)
Translates to: AQPESSVPALLYLLY*SGKVAEITAVRSLS
Trigger: GCTGAGGCTTCTCACAGCGGTGATTTCTGCAACCTTTCCGCTCCAATAGAGTAAATAGAGAAGTGCTGGTACCGACGACTCTGGCTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR GCA 90 bp CTTATATTGGAGGTGTGTCCCCAGGTAGTAGCACTGGTAGATGCGTaGACCTGTGGGCTGAGGTTGATTTCCCAGAGTGGTTACAAAAGC +
Preference number: 1 (lower is better)
Translates to: LILEVCPQVVALVDA*TCGLRLISQSGYKS
Trigger: GCTTTTGTAACCACTCTGGGAAATCAACCTCAGCCCACAGGTGCACGCATCTACCAGTGCTACTACCTGGGGACACACCTCCAATATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR GCA 90 bp ATAAATCTGAGAGCCTGGCACCTTGCAGGATGCCTATTTTGGCAGTaGATGAACCTCCAGAGTAGGCATGACCTCTGTAGCGAGACCAAC +
Preference number: 1 (lower is better)
Translates to: INLRAWHLAGCLFWQ*MNLQSRHDLCSETN
Trigger: GTTGGTCTCGCTACAGAGGTCATGCCTACTCTGGAGGTTCATGCACTGCCAAAATAGGCATCCTGCAAGGTGCCAGGCTCTCAGATTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR GCA 90 bp GAATATTGGCTACTCTGCAGGTTTGCTTCACAGTTGACAGGAGCTTaGCCCAAGGGAGCACTTCTTATATTGGAGGTGTGTCCCCAGGTA +
Preference number: 1 (lower is better)
Translates to: EYWLLCRFASQLTGA*PKGALLILEVCPQV
Trigger: TACCTGGGGACACACCTCCAATATAAGAAGTGCTCCCTTGGGGCAAGCTCCTGTCAACTGTGAAGCAAACCTGCAGAGTAGCCAATATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR GCA 90 bp CGTGTTGGTATAGCAATAAATCTGAGAGCCTGGCACCTTGCAGGATaGCTATTTTGGCAGTGCATGAACCTCCAGAGTAGGCATGACCTC +
Preference number: 1 (lower is better)
Translates to: RVGIAINLRAWHLAG*LFWQCMNLQSRHDL
Trigger: GAGGTCATGCCTACTCTGGAGGTTCATGCACTGCCAAAATAGGCATCCTGCAAGGTGCCAGGCTCTCAGATTTATTGCTATACCAACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR CCA 90 bp ACTGGTAGATGCGTGCACCTGTGGGCTGAGGTTGATTTCCCAGAGTaGTTACAAAAGCCCAGGCCTGACTTCACCCAATTCTCTAGTTTA +
Preference number: 1 (lower is better)
Translates to: TGRCVHLWAEVDFPE*LQKPRPDFTQFSSL
Trigger: TAAACTAGAGAATTGGGTGAAGTCAGGCCTGGGCTTTTGTAACCACTCTGGGAAATCAACCTCAGCCCACAGGTGCACGCATCTACCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR CCA 90 bp ATAGCAATAAATCTGAGAGCCTGGCACCTTGCAGGATGCCTATTTTaGCAGTGCATGAACCTCCAGAGTAGGCATGACCTCTGTAGCGAG +
Preference number: 1 (lower is better)
Translates to: IAINLRAWHLAGCLF*QCMNLQSRHDLCSE
Trigger: CTCGCTACAGAGGTCATGCCTACTCTGGAGGTTCATGCACTGCCAAAATAGGCATCCTGCAAGGTGCCAGGCTCTCAGATTTATTGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR GCA 90 bp GTCGGTACCAGCACTTCTCTATTTACTCTATTGGAGCGGAAAGGTTaGAGAAATCACCGCTGTGAGAAGCCTCAGCAAGTGAATTGCTTC +
Preference number: 1 (lower is better)
Translates to: VGTSTSLFTLLERKG*RNHRCEKPQQVNCF
Trigger: GAAGCAATTCACTTGCTGAGGCTTCTCACAGCGGTGATTTCTGCAACCTTTCCGCTCCAATAGAGTAAATAGAGAAGTGCTGGTACCGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR CCA 90 bp ACTGCACTGGGTTCAGGGCTTCATCTGAATTTGAAGAACTCGTGTTaGTATAGCAATAAATCTGAGAGCCTGGCACCTTGCAGGATGCCT +
Preference number: 1 (lower is better)
Translates to: TALGSGLHLNLKNSC*YSNKSESLAPCRMP
Trigger: AGGCATCCTGCAAGGTGCCAGGCTCTCAGATTTATTGCTATACCAACACGAGTTCTTCAAATTCAGATGAAGCCCTGAACCCAGTGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR GCA 90 bp ACTTCTCTGCTTTTAACTCAAAGAATATTGGCTACTCTGCAGGTTTaGTTCACAGTTGACAGGAGCTTGCCCCAAGGGAGCACTTCTTAT +
Preference number: 1 (lower is better)
Translates to: TSLLLTQRILATLQV*FTVDRSLPQGSTSY
Trigger: ATAAGAAGTGCTCCCTTGGGGCAAGCTCCTGTCAACTGTGAAGCAAACCTGCAGAGTAGCCAATATTCTTTGAGTTAAAAGCAGAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR TCA 90 bp GGTTGTGGACATGTGTATGTGCACAACACTGCCACACTCTTAGAATaGATACAGTATAACTTGCCGAATAGCCTTTACAAATGGCTACCC +
Preference number: 1 (lower is better)
Translates to: GCGHVYVHNTATLLE*IQYNLPNSLYKWLP
Trigger: GGGTAGCCATTTGTAAAGGCTATTCGGCAAGTTATACTGTATTCATTCTAAGAGTGTGGCAGTGTTGTGCACATACACATGTCCACAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR TCA 90 bp ACAGGGGTCCGGAATCCCCTAGTGGAGGAGGCTGAGCTGGCCTGGGCAAGGGTGAGAGGCCTACAGGGCTaGAGCTGCCCTTTGCCCCGT +
Preference number: 2 (lower is better)
Translates to: TGVRNPLVEEAELAWARVRGLQG*SCPLPR
Trigger: ACGGGGCAAAGGGCAGCTTCAGCCCTGTAGGCCTCT...CACCCTTGCCCAGGCCAGCTCAGCCTCCTCCACTAGGGGATTCCGGACCCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR CAA 90 bp AGGAGGAAGAGGCCTACAGGGCTGAAGCTGCCCTTTGCCCCGTGGTaGGCTCTGGGATGTGATGGCCACACAGCCAGGAGCCTGCACTCG +
Preference number: 2 (lower is better)
Translates to: RRKRPTGLKLPFAPW*ALGCDGHTARSLHS
Trigger: CGAGTGCAGGCTCCTGGCTGTGTGGCCATCACATCCCAGAGCCAACCACGGGGCAAAGGGCAGCTTCAGCCCTGTAGGCCTCTTCCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR TCA 90 bp ACAGGGGTCCGGAATCCCCTAGTGGAGGAGGCTGAGCTGGCCTGGGCAAGGGTGGCCCCACTAGACTCCTaGTCCAGTGGCCCAAACACT +
Preference number: 2 (lower is better)
Translates to: TGVRNPLVEEAELAWARVAPLDS*SSGPNT
Trigger: AGTGTTTGGGCCACTGGATCAGGAGTCTAGTGGGGC...CACCCTTGCCCAGGCCAGCTCAGCCTCCTCCACTAGGGGATTCCGGACCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR CCA 90 bp ACAGGGGTCCGGAATCCCCTAGTGGAGGAGGCTGAGCTGGCCTGGGCAAGGGTGGTGGAAGGGGAGCCCTaGGCACAGATGTGTGTGCAT +
Preference number: 2 (lower is better)
Translates to: TGVRNPLVEEAELAWARVVEGEP*AQMCVH
Trigger: ATGCACACACATCTGTGCCCAGGGCTCCCCTTCCAC...CACCCTTGCCCAGGCCAGCTCAGCCTCCTCCACTAGGGGATTCCGGACCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR TCA 90 bp GAGCCCTGGGCACAGATGTGTGTGCATATGTTACGTGACACATCCTGGGCTAGTGTTGGCTCTGGGATGTaGTGGCCACACAGCCAGGAG +
Preference number: 2 (lower is better)
Translates to: EPWAQMCVHMLRDTSWASVGSGM*WPHSQE
Trigger: CTCCTGGCTGTGTGGCCATCACATCCCAGAGCCAAC...ACTAGCCCAGGATGTGTCACGTAACATATGCACACACATCTGTGCCCAGGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR GCA 90 bp ATGAACCTCCAGAGTAGGCATGACCTCTGTAGCGAGACCAACCCTTCTTTGGGCACACAGCCAGGAGCCTaGACTCGGGAGAGCAGTGGA +
Preference number: 2 (lower is better)
Translates to: MNLQSRHDLCSETNPSLGTQPGA*TRESSG
Trigger: TCCACTGCTCTCCCGAGTGCAGGCTCCTGGCTGTGT...GCCCAAAGAAGGGTTGGTCTCGCTACAGAGGTCATGCCTACTCTGGAGGTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR GCA 90 bp CATTGGTGCTCTCTGCTGGCAGTGACAAACATGGTGTGTCTTCCTTCACCTGTGCCCTGCCCTCGGTTCTaGTGGTCACCCTTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: HWCSLLAVTNMVCLPSPVPCPRF*WSPFGL
Trigger: GAGGCCAAAGGGTGACCAGCAGAACCGAGGGCAGGG...CACAGGTGAAGGAAGACACACCATGTTTGTCACTGCCAGCAGAGAGCACCAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR GCA 90 bp GTAAGAGACGCTTCTCACCCATTGGTGCTCTCTGCTGGCAGTGACAAACATGGTCCCTGCCCTCGGTTCTaGTGGTCACCCTTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: VRDASHPLVLSAGSDKHGPCPRF*WSPFGL
Trigger: GAGGCCAAAGGGTGACCAGCAGAACCGAGGGCAGGG...ACCATGTTTGTCACTGCCAGCAGAGAGCACCAATGGGTGAGAAGCGTCTCTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR CCA 90 bp GGGCTGAAGCTGCCCTTTGCCCCGTGGTTGGCTCTGGGATGTGATGGCCACACACACTCGGGAGAGCAGTaGAGATATATTTCAGAGGGA +
Preference number: 2 (lower is better)
Translates to: GLKLPFAPWLALGCDGHTHSGEQ*RYISEG
Trigger: TCCCTCTGAAATATATCTCCACTGCTCTCCCGAGTG...TGTGTGGCCATCACATCCCAGAGCCAACCACGGGGCAAAGGGCAGCTTCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR CCA 90 bp CACCCCCACAAAGGCTCAGCTGAGGAGGAAGAGGCCTACAGGGCTGAAGCTGCCCACTCGGGAGAGCAGTaGAGATATATTTCAGAGGGA +
Preference number: 2 (lower is better)
Translates to: HPHKGSAEEEEAYRAEAAHSGEQ*RYISEG
Trigger: TCCCTCTGAAATATATCTCCACTGCTCTCCCGAGTG...GGCAGCTTCAGCCCTGTAGGCCTCTTCCTCCTCAGCTGAGCCTTTGTGGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR CCA 90 bp GTAAGAGACGCTTCTCACCCATTGGTGCTCTCTGCTGGCAGTGACAAACATGGTCCCCGTGGTTGGCTCTaGGATGTGATGGCCACACAG +
Preference number: 2 (lower is better)
Translates to: VRDASHPLVLSAGSDKHGPRGWL*DVMATQ
Trigger: CTGTGTGGCCATCACATCCCAGAGCCAACCACGGGG...ACCATGTTTGTCACTGCCAGCAGAGAGCACCAATGGGTGAGAAGCGTCTCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR TCA 90 bp AGCCCAGGCCTGACTTCACCCAATTCTCTAGTTTACTGTTTGTCTGCTTGGGCGGCCCCACTAGACTCCTaGTCCAGTGGCCCAAACACT +
Preference number: 2 (lower is better)
Translates to: SPGLTSPNSLVYCLSAWAAPLDS*SSGPNT
Trigger: AGTGTTTGGGCCACTGGATCAGGAGTCTAGTGGGGC...CGCCCAAGCAGACAAACAGTAAACTAGAGAATTGGGTGAAGTCAGGCCTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR TCA 90 bp GAGCCCTGGGCACAGATGTGTGTGCATATGTTACGTGACACATCCTGGGCTAGTTTGCTTCAGACAGGGTaGGCATCTCTCCTGTGGAGG +
Preference number: 2 (lower is better)
Translates to: EPWAQMCVHMLRDTSWASLLQTG*ASLLWR
Trigger: CCTCCACAGGAGAGATGCTCACCCTGTCTGAAGCAA...ACTAGCCCAGGATGTGTCACGTAACATATGCACACACATCTGTGCCCAGGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR CCA 90 bp GATGTAAGAGACGCTTCTCACCCATTGGTGCTCTCTGCTGGCAGTGACAAACATCTGCTGGTCACCCTTTaGCCTCTAAGTGTTCTGCCC +
Preference number: 2 (lower is better)
Translates to: DVRDASHPLVLSAGSDKHLLVTL*PLSVLP
Trigger: GGGCAGAACACTTAGAGGCCAAAGGGTGACCAGCAG...ATGTTTGTCACTGCCAGCAGAGAGCACCAATGGGTGAGAAGCGTCTCTTACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR CCA 90 bp AGCCCAGGCCTGACTTCACCCAATTCTCTAGTTTACTGTTTGTCTGCTTGGGCGTTGTTTGTTTGCAAGTaGTGCCTGCTCTGCCCCCAC +
Preference number: 2 (lower is better)
Translates to: SPGLTSPNSLVYCLSAWALFVCK*CLLCPH
Trigger: GTGGGGGCAGAGCAGGCACCACTTGCAAACAAACAA...CGCCCAAGCAGACAAACAGTAAACTAGAGAATTGGGTGAAGTCAGGCCTGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR CAA 90 bp AGCACAGCCAGAGTCGTCGGTACCAGCACTTCTCTATTTACTCTATaGGAGCGGAAAGGTTGCAGAAATCACCGCTGTGAGAAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: STARVVGTSTSLFTL*ERKGCRNHRCEKPQ
Trigger: CTGAGGCTTCTCACAGCGGTGATTTCTGCAACCTTTCCGCTCCAATAGAGTAAATAGAGAAGTGCTGGTACCGACGACTCTGGCTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR TCA 90 bp AGCCCAGGCCTGACTTCACCCAATTCTCTAGTTTACTGTTTGTCTGCTTGGGCGGGTGGTGGTAGTGAGTaGGTGGGTTTGTTTGTTTGC +
Preference number: 2 (lower is better)
Translates to: SPGLTSPNSLVYCLSAWAGGGSE*VGLFVC
Trigger: GCAAACAAACAAACCCACTCACTCACTACCACCACC...CGCCCAAGCAGACAAACAGTAAACTAGAGAATTGGGTGAAGTCAGGCCTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR GCA 90 bp GATGTAAGAGACGCTTCTCACCCATTGGTGCTCTCTGCTGGCAGTGACAAACATACACATGGGAGAGCATaGTTGTCCACCCCCACAAAG +
Preference number: 2 (lower is better)
Translates to: DVRDASHPLVLSAGSDKHTHGRA*LSTPTK
Trigger: CTTTGTGGGGGTGGACAAGCATGCTCTCCCATGTGT...ATGTTTGTCACTGCCAGCAGAGAGCACCAATGGGTGAGAAGCGTCTCTTACATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR CAA 90 bp AGAATATTGGCTACTCTGCAGGTTTGCTTCACAGTTGACAGGAGCTaGCCCCAAGGGAGCACTTCTTATATTGGAGGTGTGTCCCCAGGT +
Preference number: 2 (lower is better)
Translates to: RILATLQVCFTVDRS*PQGSTSYIGGVSPG
Trigger: ACCTGGGGACACACCTCCAATATAAGAAGTGCTCCCTTGGGGCAAGCTCCTGTCAACTGTGAAGCAAACCTGCAGAGTAGCCAATATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR CAA 90 bp CCGGGGTTCTCAGGGCACTCACTGTTCTATTCACCTCTGTTAGAATaGGGTTTCCTCTTGAGTCCACACCACCCCATCTCATGTTATACA +
Preference number: 2 (lower is better)
Translates to: PGFSGHSLFYSPLLE*GFLLSPHHPISCYT
Trigger: TGTATAACATGAGATGGGGTGGTGTGGACTCAAGAGGAAACCCAATTCTAACAGAGGTGAATAGAACAGTGAGTGCCCTGAGAACCCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR TCA 90 bp GTTGAGCCCAGACAACACTGCACTGGGTTCAGGGCTTCATCTGAATTTGAAGAAACATATCCTCATATCTaGCACCAGGCCCTCACCAGA +
Preference number: 2 (lower is better)
Translates to: VEPRQHCTGFRASSEFEETYPHI*HQALTR
Trigger: TCTGGTGAGGGCCTGGTGTCAGATATGAGGATATGT...TTCTTCAAATTCAGATGAAGCCCTGAACCCAGTGCAGTGTTGTCTGGGCTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR GCA 90 bp GTAAGAGACGCTTCTCACCCATTGGTGCTCTCTGCTGGCAGTGACAAACATGGTGGGCACAGATGTGTGTaGATATGTTACGTGACACAT +
Preference number: 2 (lower is better)
Translates to: VRDASHPLVLSAGSDKHGGHRCV*ICYVTH
Trigger: ATGTGTCACGTAACATATGCACACACATCTGTGCCC...ACCATGTTTGTCACTGCCAGCAGAGAGCACCAATGGGTGAGAAGCGTCTCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR CCA 90 bp GAGCCCTGGGCACAGATGTGTGTGCATATGTTACGTGACACATCCTGGGCTAGTGAGGGAGAGGAGAGTTaGATACCCATTCTTTTACAA +
Preference number: 2 (lower is better)
Translates to: EPWAQMCVHMLRDTSWASEGEES*IPILLQ
Trigger: TTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTC...ACTAGCCCAGGATGTGTCACGTAACATATGCACACACATCTGTGCCCAGGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR GCA 90 bp CTCTCTGCTGGCAGTGACAAACATGGTGTGTCTTCCTTCACCTGTGGTGATTTTAATTACCCTTTTGGTTaGCCCACCAAACTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: LSAGSDKHGVSSFTCGDFNYPFG*PTKLFR
Trigger: CCGGAACAGTTTGGTGGGGCAACCAAAAGGGTAATT...AAAATCACCACAGGTGAAGGAAGACACACCATGTTTGTCACTGCCAGCAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR TCA 90 bp TCTCTCGTCTACCACAAGAGTTGGCCTTGGGTTTCTAAAACTAAGTTAAACCGTATAATCTCGGGTCTCTaGGAAAGGGGAAGGGTAGGC +
Preference number: 2 (lower is better)
Translates to: SLVYHKSWPWVSKTKLNRIISGL*ERGRVG
Trigger: GCCTACCCTTCCCCTTTCTCAGAGACCCGAGATTAT...ACGGTTTAACTTAGTTTTAGAAACCCAAGGCCAACTCTTGTGGTAGACGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR GCA 90 bp GATGTAAGAGACGCTTCTCACCCATTGGTGCTCTCTGCTGGCAGTGACAAACATATGCATCTGCCTTTTTaGTTTAGGAACAAGGTCCCT +
Preference number: 2 (lower is better)
Translates to: DVRDASHPLVLSAGSDKHMHLPF*FRNKVP
Trigger: AGGGACCTTGTTCCTAAAGCAAAAAGGCAGATGCAT...ATGTTTGTCACTGCCAGCAGAGAGCACCAATGGGTGAGAAGCGTCTCTTACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR GCA 90 bp TGTTGGTATAGCAATAAATCTGAGAGCCTGGCACCTTGCAGGATGCCTATTTTGTTGGAGCGGAAAGGTTaGAGAAATCACCGCTGTGAG +
Preference number: 2 (lower is better)
Translates to: CWYSNKSESLAPCRMPILLERKG*RNHRCE
Trigger: CTCACAGCGGTGATTTCTGCAACCTTTCCGCTCCAA...CAAAATAGGCATCCTGCAAGGTGCCAGGCTCTCAGATTTATTGCTATACCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR GCA 90 bp CTCTCTGCTGGCAGTGACAAACATGGTGTGTCTTCCTTCACCTGTGGTGATTTTGGGCACAGATGTGTGTaGATATGTTACGTGACACAT +
Preference number: 2 (lower is better)
Translates to: LSAGSDKHGVSSFTCGDFGHRCV*ICYVTH
Trigger: ATGTGTCACGTAACATATGCACACACATCTGTGCCC...AAAATCACCACAGGTGAAGGAAGACACACCATGTTTGTCACTGCCAGCAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR GCA 90 bp GGTGTTATGCAGAGTTACATTTTACAATGGTTAGAGAGCTTAGACCTTTTACACTCAGAGACAGGCCCCTaGCCTCGGTTCTGCTGGTCA +
Preference number: 2 (lower is better)
Translates to: GVMQSYILQWLESLDLLHSETGP*PRFCWS
Trigger: TGACCAGCAGAACCGAGGGCAGGGGCCTGTCTCTGA...GTGTAAAAGGTCTAAGCTCTCTAACCATTGTAAAATGTAACTCTGCATAACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR CCA 90 bp TCTCTATTTACTCTATTGGAGCGGAAAGGTTGCAGAAATCACCGCTGTGAGAAGACACATCAGGACACATaGGAGAGCATGCTTGTCCAC +
Preference number: 2 (lower is better)
Translates to: SLFTLLERKGCRNHRCEKTHQDT*ESMLVH
Trigger: GTGGACAAGCATGCTCTCCCATGTGTCCTGATGTGT...CTTCTCACAGCGGTGATTTCTGCAACCTTTCCGCTCCAATAGAGTAAATAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR CCA 90 bp ATGAACCTCCAGAGTAGGCATGACCTCTGTAGCGAGACCAACCCTTCTTTGGGCCACAAGAGTTGGCCTTaGGTTTCTAAAACTAAGTTA +
Preference number: 2 (lower is better)
Translates to: MNLQSRHDLCSETNPSLGHKSWP*VSKTKL
Trigger: TAACTTAGTTTTAGAAACCCAAGGCCAACTCTTGTG...GCCCAAAGAAGGGTTGGTCTCGCTACAGAGGTCATGCCTACTCTGGAGGTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR TCA 90 bp GGTGTTATGCAGAGTTACATTTTACAATGGTTAGAGAGCTTAGACCTTTTACACCCACAAAGGCTCAGCTaGGGAGGAAGAGGCCTACAG +
Preference number: 2 (lower is better)
Translates to: GVMQSYILQWLESLDLLHPQRLS*GGRGLQ
Trigger: CTGTAGGCCTCTTCCTCCTCAGCTGAGCCTTTGTGG...GTGTAAAAGGTCTAAGCTCTCTAACCATTGTAAAATGTAACTCTGCATAACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR GCA 90 bp CACACCACCCCATCTCATGTTATACAGATCACAAATAACCTCCCCTCTGTGATTCCTCAGCAAGTGAATTaGTTCAGACAGGGTGAGCAT +
Preference number: 2 (lower is better)
Translates to: HTTPSHVIQITNNLPSVIPQQVN*FRQGEH
Trigger: ATGCTCACCCTGTCTGAAGCAATTCACTTGCTGAGG...AATCACAGAGGGGAGGTTATTTGTGATCTGTATAACATGAGATGGGGTGGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR CCA 90 bp TCTCTCGTCTACCACAAGAGTTGGCCTTGGGTTTCTAAAACTAAGTTAAACCGTGGCCCACATGGGTTGTaGACATGTGTATGTGCACAA +
Preference number: 2 (lower is better)
Translates to: SLVYHKSWPWVSKTKLNRGPHGL*TCVCAQ
Trigger: TTGTGCACATACACATGTCCACAACCCATGTGGGCC...ACGGTTTAACTTAGTTTTAGAAACCCAAGGCCAACTCTTGTGGTAGACGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR TCA 90 bp GAGAGCAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTCTACAAATGAAAAGTaGTTTGCCTTGCTGTGGCAG +
Preference number: 2 (lower is better)
Translates to: ESSGDIFQRERRVGYPFFSTNEK*FALLWQ
Trigger: CTGCCACAGCAAGGCAAATCACTTTTCATTTGTAGA...AAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
ENSMUST00000135948.2
3UTR-3UTR TCA 90 bp TGTTGGTATAGCAATAAATCTGAGAGCCTGGCACCTTGCAGGATGCCTATTTTGATAACCTCCCCTCTGTaGTTTGTTAGTTTTCTGGTG +
Preference number: 2 (lower is better)
Translates to: CWYSNKSESLAPCRMPILITSPL*FVSFLV
Trigger: CACCAGAAAACTAACAAATCACAGAGGGGAGGTTAT...CAAAATAGGCATCCTGCAAGGTGCCAGGCTCTCAGATTTATTGCTATACCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR GCA 90 bp GAGTGGTTACAAAAGCCCAGGCCTGACTTCACCCAATTCTCTAGTTTACTGTTTATGCATCTGCCTTTTTaGTTTAGGAACAAGGTCCCT +
Preference number: 2 (lower is better)
Translates to: EWLQKPRPDFTQFSSLLFMHLPF*FRNKVP
Trigger: AGGGACCTTGTTCCTAAAGCAAAAAGGCAGATGCAT...AAACAGTAAACTAGAGAATTGGGTGAAGTCAGGCCTGGGCTTTTGTAACCACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR GCA 90 bp TCTCTATTTACTCTATTGGAGCGGAAAGGTTGCAGAAATCACCGCTGTGAGAAGGTCTATGCATGCATCTaGCTTTTTGCTTTAGGAACA +
Preference number: 2 (lower is better)
Translates to: SLFTLLERKGCRNHRCEKVYACI*LFALGT
Trigger: TGTTCCTAAAGCAAAAAGGCAGATGCATGCATAGAC...CTTCTCACAGCGGTGATTTCTGCAACCTTTCCGCTCCAATAGAGTAAATAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR GCA 90 bp TCTCTCGTCTACCACAAGAGTTGGCCTTGGGTTTCTAAAACTAAGTTAAACCGTCACAGTGTCTATGCATaGATCTGCCTTTTTGCTTTA +
Preference number: 2 (lower is better)
Translates to: SLVYHKSWPWVSKTKLNRHSVYA*ICLFAL
Trigger: TAAAGCAAAAAGGCAGATGCATGCATAGACACTGTG...ACGGTTTAACTTAGTTTTAGAAACCCAAGGCCAACTCTTGTGGTAGACGAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR CCA 90 bp CTGATAACTTCTCTGCTTTTAACTCAAAGAATATTGGCTACTCTGCAGGTTTGCAATAGCCTTTACAAATaGCTACCCAGTAGAGCGATG +
Preference number: 2 (lower is better)
Translates to: LITSLLLTQRILATLQVCNSLYK*LPSRAM
Trigger: CATCGCTCTACTGGGTAGCCATTTGTAAAGGCTATT...GCAAACCTGCAGAGTAGCCAATATTCTTTGAGTTAAAAGCAGAGAAGTTATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR CCA 90 bp GTCTACCACAAGAGTTGGCCTTGGGTTTCTAAAACTAAGTTAAACCGTTATATAGAGGGAGAGGAGAGTTaGATACCCATTCTTTTACAA +
Preference number: 2 (lower is better)
Translates to: VYHKSWPWVSKTKLNRYIEGEES*IPILLQ
Trigger: TTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTC...TATATAACGGTTTAACTTAGTTTTAGAAACCCAAGGCCAACTCTTGTGGTAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR TCA 72 bp GAAGCTGCCCTTTGCCCCGTGGTTGGCTCTGGGATGTaGTGGCCACACAGCCAGGAGCCTGCACTCGGGAGA +
Preference number: 3 (lower is better)
Translates to: EAALCPVVGSGM*WPHSQEPALGR
Trigger: TCTCCCGAGTGCAGGCTCCTGGCTGTGTGGCCATCACATCCCAGAGCCAACCACGGGGCAAAGGGCAGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR TCA 72 bp GAACACAGGGGTCCGGAATCCCCTAGTGGAGGAGGCTaGGCTGGCCTGGGCAAGGGTGGAAGTCGAGTATCT +
Preference number: 3 (lower is better)
Translates to: EHRGPESPSGGG*AGLGKGGSRVS
Trigger: AGATACTCGACTTCCACCCTTGCCCAGGCCAGCTCAGCCTCCTCCACTAGGGGATTCCGGACCCCTGTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR TCA 72 bp CCACCAAACTGTTCCGGGCGGGCCCCACTAGACTCCTaGTCCAGTGGCCCAAACACTGATAATCTCGGGTCT +
Preference number: 3 (lower is better)
Translates to: PPNCSGRAPLDS*SSGPNTDNLGS
Trigger: AGACCCGAGATTATCAGTGTTTGGGCCACTGGATCAGGAGTCTAGTGGGGCCCGCCCGGAACAGTTTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR TCA 72 bp ATGACCTCTGTAGCGAGACCAACCCTTCTTTGGGCCTaGCCCTTCCTGAGAACACAGGGGTCCGGAATCCCC +
Preference number: 3 (lower is better)
Translates to: MTSVARPTLLWA*PFLRTQGSGIP
Trigger: GGGGATTCCGGACCCCTGTGTTCTCAGGAAGGGTCAGGCCCAAAGAAGGGTTGGTCTCGCTACAGAGGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR TCA 72 bp AGTGGTGCCTGCTCTGCCCCCACATATCCTCATATCTaGCACCAGGCCCTCACCAGATCTCTCGTCTACCAC +
Preference number: 3 (lower is better)
Translates to: SGACSAPTYPHI*HQALTRSLVYH
Trigger: GTGGTAGACGAGAGATCTGGTGAGGGCCTGGTGTCAGATATGAGGATATGTGGGGGCAGAGCAGGCACCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR GCA 72 bp CTGGGCAGTAGTTTGATCTCCCCTTGCCTGTCACCATaGCCCGCTGTGAGTACACATCAGGACACATGGGAG +
Preference number: 3 (lower is better)
Translates to: LGSSLISPCLSP*PAVSTHQDTWE
Trigger: CTCCCATGTGTCCTGATGTGTACTCACAGCGGGGCATGGTGACAGGCAAGGGGAGATCAAACTACTGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR GCA 72 bp CCCAGGTGGAAGGGGAGCCCTGGGCACAGATGTGTGTaGATATGTTACGTGACACATCCTGGGCTAGTGTAC +
Preference number: 3 (lower is better)
Translates to: PRWKGSPGHRCV*ICYVTHPGLVY
Trigger: GTACACTAGCCCAGGATGTGTCACGTAACATATGCACACACATCTGTGCCCAGGGCTCCCCTTCCACCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR CCA 72 bp TCACCATGCCCCGCTGTGAGTACACATCAGGACACATaGGAGAGCATGCTTGTCCACCCCCACAAAGGCTCA +
Preference number: 3 (lower is better)
Translates to: SPCPAVSTHQDT*ESMLVHPHKGS
Trigger: TGAGCCTTTGTGGGGGTGGACAAGCATGCTCTCCCATGTGTCCTGATGTGTACTCACAGCGGGGCATGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR TCA 72 bp CTGAGCTGGCCTGGGCAAGGGTGGAAGTCGAGTATCTaGGCGCTGCTAAAGGAGCCGCTAACTGATAACTTC +
Preference number: 3 (lower is better)
Translates to: LSWPGQGWKSSI*ALLKEPLTDNF
Trigger: GAAGTTATCAGTTAGCGGCTCCTTTAGCAGCGCTCAGATACTCGACTTCCACCCTTGCCCAGGCCAGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR GCA 72 bp ATTGGAGGTGTGTCCCCAGGTAGTAGCACTGGTAGATaGGTGCACCTGTGGGCTGAGGTTGATTTCCCAGAG +
Preference number: 3 (lower is better)
Translates to: IGGVSPGSSTGR*VHLWAEVDFPE
Trigger: CTCTGGGAAATCAACCTCAGCCCACAGGTGCACGCATCTACCAGTGCTACTACCTGGGGACACACCTCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR TCA 72 bp AGCGCTGACAGCCCCACACCCCAATCTGCTTTCATTTaGGGTTGGGCATACTGCCCTGACTATCCTGACTTC +
Preference number: 3 (lower is better)
Translates to: SADSPTPQSAFI*GWAYCPDYPDF
Trigger: GAAGTCAGGATAGTCAGGGCAGTATGCCCAACCTCAAATGAAAGCAGATTGGGGTGTGGGGCTGTCAGCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR TCA 72 bp GCACTAAGGATGAACCCAAGCTTCGTGCTTGCTTGTTaGGCGCTGACAGCCCCACACCCCAATCTGCTTTCA +
Preference number: 3 (lower is better)
Translates to: ALRMNPSFVLAC*ALTAPHPNLLS
Trigger: TGAAAGCAGATTGGGGTGTGGGGCTGTCAGCGCTCAACAAGCAAGCACGAAGCTTGGGTTCATCCTTAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR TCA 72 bp CCTGGCACCTTGCAGGATGCCTATTTTGGCAGTGCATaGACCTCCAGAGTAGGCATGACCTCTGTAGCGAGA +
Preference number: 3 (lower is better)
Translates to: PGTLQDAYFGSA*TSRVGMTSVAR
Trigger: TCTCGCTACAGAGGTCATGCCTACTCTGGAGGTTCATGCACTGCCAAAATAGGCATCCTGCAAGGTGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR GCA 72 bp AGCGCTTCACAGTGTCTATGCATGCATCTGCCTTTTTaGTTTAGGAACAAGGTCCCTGGGGACAGGCTGGGC +
Preference number: 3 (lower is better)
Translates to: SASQCLCMHLPF*FRNKVPGDRLG
Trigger: GCCCAGCCTGTCCCCAGGGACCTTGTTCCTAAAGCAAAAAGGCAGATGCATGCATAGACACTGTGAAGCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR GCA 72 bp CAGATTTCTAGCCATGGGACTAATTACCCTTTTGGTTaGCCCACCAAACTGTTCCGGGCGGGCCCCACTAGA +
Preference number: 3 (lower is better)
Translates to: QISSHGTNYPFG*PTKLFRAGPTR
Trigger: TCTAGTGGGGCCCGCCCGGAACAGTTTGGTGGGGCAACCAAAAGGGTAATTAGTCCCATGGCTAGAAATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR GCA 72 bp AGAGCCTGGCACCTTGCAGGATGCCTATTTTGGCAGTaGATGAACCTCCAGAGTAGGCATGACCTCTGTAGC +
Preference number: 3 (lower is better)
Translates to: RAWHLAGCLFWQ*MNLQSRHDLCS
Trigger: GCTACAGAGGTCATGCCTACTCTGGAGGTTCATGCACTGCCAAAATAGGCATCCTGCAAGGTGCCAGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR CCA 72 bp TGCGTGCACCTGTGGGCTGAGGTTGATTTCCCAGAGTaGTTACAAAAGCCCAGGCCTGACTTCACCCAATTC +
Preference number: 3 (lower is better)
Translates to: CVHLWAEVDFPE*LQKPRPDFTQF
Trigger: GAATTGGGTGAAGTCAGGCCTGGGCTTTTGTAACCACTCTGGGAAATCAACCTCAGCCCACAGGTGCACGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR CCA 72 bp TCCCCAGGTAGTAGCACTGGTAGATGCGTGCACCTGTaGGCTGAGGTTGATTTCCCAGAGTGGTTACAAAAG +
Preference number: 3 (lower is better)
Translates to: SPGSSTGRCVHL*AEVDFPEWLQK
Trigger: CTTTTGTAACCACTCTGGGAAATCAACCTCAGCCCACAGGTGCACGCATCTACCAGTGCTACTACCTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR CCA 72 bp AATCTGAGAGCCTGGCACCTTGCAGGATGCCTATTTTaGCAGTGCATGAACCTCCAGAGTAGGCATGACCTC +
Preference number: 3 (lower is better)
Translates to: NLRAWHLAGCLF*QCMNLQSRHDL
Trigger: GAGGTCATGCCTACTCTGGAGGTTCATGCACTGCCAAAATAGGCATCCTGCAAGGTGCCAGGCTCTCAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR CAA 90 bp CACACCACCCCATCTCATGTTATACAGATCACAAATAACCTCCCCTCTGTGATTCCCTTTGCCCCGTGGTaGGCTCTGGGATGTGATGGC +
Preference number: 3 (lower is better)
Translates to: HTTPSHVIQITNNLPSVIPFAPW*ALGCDG
Trigger: GCCATCACATCCCAGAGCCAACCACGGGGCAAAGGG...AATCACAGAGGGGAGGTTATTTGTGATCTGTATAACATGAGATGGGGTGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR TCA 72 bp GTTGCAGAAATCACCGCTGTGAGAAGCCTCAGCAAGTaGATTGCTTCAGACAGGGTGAGCATCTCTCCTGTG +
Preference number: 3 (lower is better)
Translates to: VAEITAVRSLSK*IASDRVSISPV
Trigger: CACAGGAGAGATGCTCACCCTGTCTGAAGCAATTCACTTGCTGAGGCTTCTCACAGCGGTGATTTCTGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR GCA 72 bp CCAGGTGTAGCGCTTCACAGTGTCTATGCATGCATCTaGCTTTTTGCTTTAGGAACAAGGTCCCTGGGGACA +
Preference number: 3 (lower is better)
Translates to: PGVALHSVYACI*LFALGTRSLGT
Trigger: TGTCCCCAGGGACCTTGTTCCTAAAGCAAAAAGGCAGATGCATGCATAGACACTGTGAAGCGCTACACCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR GCA 72 bp CGTCTCCCAGGTGTAGCGCTTCACAGTGTCTATGCATaGATCTGCCTTTTTGCTTTAGGAACAAGGTCCCTG +
Preference number: 3 (lower is better)
Translates to: RLPGVALHSVYA*ICLFALGTRSL
Trigger: CAGGGACCTTGTTCCTAAAGCAAAAAGGCAGATGCATGCATAGACACTGTGAAGCGCTACACCTGGGAGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR GCA 72 bp AGAAATCACCGCTGTGAGAAGCCTCAGCAAGTGAATTaGTTCAGACAGGGTGAGCATCTCTCCTGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: RNHRCEKPQQVN*FRQGEHLSCGG
Trigger: ACCTCCACAGGAGAGATGCTCACCCTGTCTGAAGCAATTCACTTGCTGAGGCTTCTCACAGCGGTGATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR CCA 72 bp GAAACTGGTGTTATCTGGAGGGGCCCACATGGGTTGTaGACATGTGTATGTGCACAACACTGCCACACTCTT +
Preference number: 3 (lower is better)
Translates to: ETGVIWRGPHGL*TCVCAQHCHTL
Trigger: AAGAGTGTGGCAGTGTTGTGCACATACACATGTCCACAACCCATGTGGGCCCCTCCAGATAACACCAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR CCA 72 bp GTGATAGGAAACTGGTGTTATCTGGAGGGGCCCACATaGGTTGTGGACATGTGTATGTGCACAACACTGCCA +
Preference number: 3 (lower is better)
Translates to: VIGNWCYLEGPT*VVDMCMCTTLP
Trigger: TGGCAGTGTTGTGCACATACACATGTCCACAACCCATGTGGGCCCCTCCAGATAACACCAGTTTCCTATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR CAA 90 bp ATGCATCTGCCTTTTTGCTTTAGGAACAAGGTCCCTGGGGACAGGCTGGGCAGTAGAGGGAGAGGAGAGTaGGATACCCATTCTTTTACA +
Preference number: 3 (lower is better)
Translates to: MHLPFCFRNKVPGDRLGSRGRGE*DTHSFT
Trigger: TGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCT...ACTGCCCAGCCTGTCCCCAGGGACCTTGTTCCTAAAGCAAAAAGGCAGATGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR GCA 72 bp CTACTCTGCAGGTTTGCTTCACAGTTGACAGGAGCTTaGCCCAAGGGAGCACTTCTTATATTGGAGGTGTGT +
Preference number: 3 (lower is better)
Translates to: LLCRFASQLTGA*PKGALLILEVC
Trigger: ACACACCTCCAATATAAGAAGTGCTCCCTTGGGGCAAGCTCCTGTCAACTGTGAAGCAAACCTGCAGAGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR GCA 72 bp CTTCCTGGCCTACACAGTGTTGAGCCCAGACAACACTaGACTGGGTTCAGGGCTTCATCTGAATTTGAAGAA +
Preference number: 3 (lower is better)
Translates to: LPGLHSVEPRQH*TGFRASSEFEE
Trigger: TTCTTCAAATTCAGATGAAGCCCTGAACCCAGTGCAGTGTTGTCTGGGCTCAACACTGTGTAGGCCAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR CCA 72 bp TCCAGCCTCGAGTATTTTGTGATAGTGATAGGAAACTaGTGTTATCTGGAGGGGCCCACATGGGTTGTGGAC +
Preference number: 3 (lower is better)
Translates to: SSLEYFVIVIGN*CYLEGPTWVVD
Trigger: GTCCACAACCCATGTGGGCCCCTCCAGATAACACCAGTTTCCTATCACTATCACAAAATACTCGAGGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR GCA 72 bp ATAGCAATAAATCTGAGAGCCTGGCACCTTGCAGGATaGCTATTTTGGCAGTGCATGAACCTCCAGAGTAGG +
Preference number: 3 (lower is better)
Translates to: IAINLRAWHLAG*LFWQCMNLQSR
Trigger: CCTACTCTGGAGGTTCATGCACTGCCAAAATAGGCATCCTGCAAGGTGCCAGGCTCTCAGATTTATTGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR CCA 72 bp GAGTCGTCGGTACCAGCACTTCTCTATTTACTCTATTaGAGCGGAAAGGTTGCAGAAATCACCGCTGTGAGA +
Preference number: 3 (lower is better)
Translates to: ESSVPALLYLLY*SGKVAEITAVR
Trigger: TCTCACAGCGGTGATTTCTGCAACCTTTCCGCTCCAATAGAGTAAATAGAGAAGTGCTGGTACCGACGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR CAA 90 bp TGTTGGTATAGCAATAAATCTGAGAGCCTGGCACCTTGCAGGATGCCTATTTTGGAATTGGGTTTCCTCTaGAGTCCACACCACCCCATC +
Preference number: 3 (lower is better)
Translates to: CWYSNKSESLAPCRMPILELGFL*SPHHPI
Trigger: GATGGGGTGGTGTGGACTCAAGAGGAAACCCAATTC...CAAAATAGGCATCCTGCAAGGTGCCAGGCTCTCAGATTTATTGCTATACCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR GCA 72 bp AGCACTTCTCTATTTACTCTATTGGAGCGGAAAGGTTaGAGAAATCACCGCTGTGAGAAGCCTCAGCAAGTG +
Preference number: 3 (lower is better)
Translates to: STSLFTLLERKG*RNHRCEKPQQV
Trigger: CACTTGCTGAGGCTTCTCACAGCGGTGATTTCTGCAACCTTTCCGCTCCAATAGAGTAAATAGAGAAGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR GCA 72 bp TGTTGGTATAGCAATAAATCTGAGAGCCTGGCACCTTaGAGGATGCCTATTTTGGCAGTGCATGAACCTCCA +
Preference number: 3 (lower is better)
Translates to: CWYSNKSESLAP*RMPILAVHEPP
Trigger: TGGAGGTTCATGCACTGCCAAAATAGGCATCCTGCAAGGTGCCAGGCTCTCAGATTTATTGCTATACCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR CCA 72 bp AGAACTCGTGTTGGTATAGCAATAAATCTGAGAGCCTaGCACCTTGCAGGATGCCTATTTTGGCAGTGCATG +
Preference number: 3 (lower is better)
Translates to: RTRVGIAINLRA*HLAGCLFWQCM
Trigger: CATGCACTGCCAAAATAGGCATCCTGCAAGGTGCCAGGCTCTCAGATTTATTGCTATACCAACACGAGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR CAA 90 bp GTTGAGCCCAGACAACACTGCACTGGGTTCAGGGCTTCATCTGAATTTGAAGAAATGAGAAAGTTGTCCTaGCTCTCTTTTCTTCCCCTT +
Preference number: 3 (lower is better)
Translates to: VEPRQHCTGFRASSEFEEMRKLS*LSFLPL
Trigger: AAGGGGAAGAAAAGAGAGCAAGGACAACTTTCTCAT...TTCTTCAAATTCAGATGAAGCCCTGAACCCAGTGCAGTGTTGTCTGGGCTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR CCA 72 bp CAGGCCCTCACCAGATCTCTCGTCTACCACAAGAGTTaGCCTTGGGTTTCTAAAACTAAGTTAAACCGTTAT +
Preference number: 3 (lower is better)
Translates to: QALTRSLVYHKS*PWVSKTKLNRY
Trigger: ATAACGGTTTAACTTAGTTTTAGAAACCCAAGGCCAACTCTTGTGGTAGACGAGAGATCTGGTGAGGGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR CCA 72 bp GGTTCAGGGCTTCATCTGAATTTGAAGAACTCGTGTTaGTATAGCAATAAATCTGAGAGCCTGGCACCTTGC +
Preference number: 3 (lower is better)
Translates to: GSGLHLNLKNSC*YSNKSESLAPC
Trigger: GCAAGGTGCCAGGCTCTCAGATTTATTGCTATACCAACACGAGTTCTTCAAATTCAGATGAAGCCCTGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR CAA 90 bp TCTCTATTTACTCTATTGGAGCGGAAAGGTTGCAGAAATCACCGCTGTGAGAAGCCAAGGATGAGAAAGTaGTCCTTGCTCTCTTTTCTT +
Preference number: 3 (lower is better)
Translates to: SLFTLLERKGCRNHRCEKPRMRK*SLLSFL
Trigger: AAGAAAAGAGAGCAAGGACAACTTTCTCATCCTTGG...CTTCTCACAGCGGTGATTTCTGCAACCTTTCCGCTCCAATAGAGTAAATAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR-3UTR CAA 90 bp GTCTACCACAAGAGTTGGCCTTGGGTTTCTAAAACTAAGTTAAACCGTTATATAAGAGGGAGAGGAGAGTaGGATACCCATTCTTTTACA +
Preference number: 3 (lower is better)
Translates to: VYHKSWPWVSKTKLNRYIRGRGE*DTHSFT
Trigger: TGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCT...TATATAACGGTTTAACTTAGTTTTAGAAACCCAAGGCCAACTCTTGTGGTAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR CCA 72 bp CTCACCAGATCTCTCGTCTACCACAAGAGTTGGCCTTaGGTTTCTAAAACTAAGTTAAACCGTTATATAGAT +
Preference number: 3 (lower is better)
Translates to: LTRSLVYHKSWP*VSKTKLNRYID
Trigger: ATCTATATAACGGTTTAACTTAGTTTTAGAAACCCAAGGCCAACTCTTGTGGTAGACGAGAGATCTGGTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR TCA 72 bp CATGTGTATGTGCACAACACTGCCACACTCTTAGAATaGATACAGTATAACTTGCCGAATAGCCTTTACAAA +
Preference number: 3 (lower is better)
Translates to: HVYVHNTATLLE*IQYNLPNSLYK
Trigger: TTTGTAAAGGCTATTCGGCAAGTTATACTGTATTCATTCTAAGAGTGTGGCAGTGTTGTGCACATACACATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR TCA 72 bp CTCATGTTATACAGATCACAAATAACCTCCCCTCTGTaGTTTGTTAGTTTTCTGGTGTTATGCAGAGTTACA +
Preference number: 3 (lower is better)
Translates to: LMLYRSQITSPL*FVSFLVLCRVT
Trigger: TGTAACTCTGCATAACACCAGAAAACTAACAAATCACAGAGGGGAGGTTATTTGTGATCTGTATAACATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp ACAGGGGTCCGGAATCCCCTAGTGGAGGAGGCTGAGCTGGCCTGGGCAAGGGTGCCGCCATGGCACTGCTaGTCACCTGCCCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: TGVRNPLVEEAELAWARVPPWHC*SPAPAG
Trigger: CCCTGCAGGGGCAGGTGAGCAGCAGTGCCATGGCGG...CACCCTTGCCCAGGCCAGCTCAGCCTCCTCCACTAGGGGATTCCGGACCCCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp ACAGGGGTCCGGAATCCCCTAGTGGAGGAGGCTGAGCTGGCCTGGGCAAGGGTGCAGCCAGGACCTTGGTaGGGGCCTCCATGCCTTCCG +
Preference number: 4 (lower is better)
Translates to: TGVRNPLVEEAELAWARVQPGPW*GPPCLP
Trigger: CGGAAGGCATGGAGGCCCTCACCAAGGTCCTGGCTG...CACCCTTGCCCAGGCCAGCTCAGCCTCCTCCACTAGGGGATTCCGGACCCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp ACAGGGGTCCGGAATCCCCTAGTGGAGGAGGCTGAGCTGGCCTGGGCAAGGGTGGCAGTGAACCTCGACTaGAGCCGGCCCAGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: TGVRNPLVEEAELAWARVAVNLD*SRPSKP
Trigger: TGGCTTGCTGGGCCGGCTGCAGTCGAGGTTCACTGC...CACCCTTGCCCAGGCCAGCTCAGCCTCCTCCACTAGGGGATTCCGGACCCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp GGGCTGAAGCTGCCCTTTGCCCCGTGGTTGGCTCTGGGATGTGATGGCCACACACAGCCAGGACCTTGGTaGGGGCCTCCATGCCTTCCG +
Preference number: 4 (lower is better)
Translates to: GLKLPFAPWLALGCDGHTQPGPW*GPPCLP
Trigger: CGGAAGGCATGGAGGCCCTCACCAAGGTCCTGGCTG...TGTGTGGCCATCACATCCCAGAGCCAACCACGGGGCAAAGGGCAGCTTCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp ACAGGGGTCCGGAATCCCCTAGTGGAGGAGGCTGAGCTGGCCTGGGCAAGGGTGAGATGGCCGTGCTGCTaGTGCAGCAGCTCAGGATCT +
Preference number: 4 (lower is better)
Translates to: TGVRNPLVEEAELAWARVRWPCC*CSSSGS
Trigger: AGATCCTGAGCTGCTGCATCAGCAGCACGGCCATCT...CACCCTTGCCCAGGCCAGCTCAGCCTCCTCCACTAGGGGATTCCGGACCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp GGCTCAGCTGAGGAGGAAGAGGCCTACAGGGCTGAAGCTGCCCTTTGCCCCGTGTGCTCCTCCAAGGCCTaGTCCAGGGGCTCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: GSAEEEEAYRAEAALCPVCSSKA*SRGSLL
Trigger: CAACAGAGAGCCCCTGGAGCAGGCCTTGGAGGAGCA...CACGGGGCAAAGGGCAGCTTCAGCCCTGTAGGCCTCTTCCTCCTCAGCTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp CACCCCCACAAAGGCTCAGCTGAGGAGGAAGAGGCCTACAGGGCTGAAGCTGCCGAACTGCTGCTGGGCTaGGGCCTTGGAGCACACCTG +
Preference number: 4 (lower is better)
Translates to: HPHKGSAEEEEAYRAEAAELLLG*GLGAHL
Trigger: CAGGTGTGCTCCAAGGCCCCAGCCCAGCAGCAGTTC...GGCAGCTTCAGCCCTGTAGGCCTCTTCCTCCTCAGCTGAGCCTTTGTGGGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp ACAGGGGTCCGGAATCCCCTAGTGGAGGAGGCTGAGCTGGCCTGGGCAAGGGTGACTTCATCAGTTCCTTaGGGTAGGAGCGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TGVRNPLVEEAELAWARVTSSVP*GRSGPG
Trigger: CCCTGGCCCGCTCCTACCCCAAGGAACTGATGAAGT...CACCCTTGCCCAGGCCAGCTCAGCCTCCTCCACTAGGGGATTCCGGACCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GGGCTGAAGCTGCCCTTTGCCCCGTGGTTGGCTCTGGGATGTGATGGCCACACAATGGGGCTGTCCACGTaGGTGAGGAGCATCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GLKLPFAPWLALGCDGHTMGLST*VRSIWG
Trigger: CCCCCAGATGCTCCTCACCCACGTGGACAGCCCCAT...TGTGTGGCCATCACATCCCAGAGCCAACCACGGGGCAAAGGGCAGCTTCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp CACCCCCACAAAGGCTCAGCTGAGGAGGAAGAGGCCTACAGGGCTGAAGCTGCCATGGGGCTGTCCACGTaGGTGAGGAGCATCTGGGGG +
Preference number: 4 (lower is better)
Translates to: HPHKGSAEEEEAYRAEAAMGLST*VRSIWG
Trigger: CCCCCAGATGCTCCTCACCCACGTGGACAGCCCCAT...GGCAGCTTCAGCCCTGTAGGCCTCTTCCTCCTCAGCTGAGCCTTTGTGGGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp ACAGGGGTCCGGAATCCCCTAGTGGAGGAGGCTGAGCTGGCCTGGGCAAGGGTGGTGATATCCCGCATCTaGTTGGAGGCAATGGCCACC +
Preference number: 4 (lower is better)
Translates to: TGVRNPLVEEAELAWARVVISRI*LEAMAT
Trigger: GGTGGCCATTGCCTCCAAGCAGATGCGGGATATCAC...CACCCTTGCCCAGGCCAGCTCAGCCTCCTCCACTAGGGGATTCCGGACCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp ACAGGGGTCCGGAATCCCCTAGTGGAGGAGGCTGAGCTGGCCTGGGCAAGGGTGTGGCTGCTGCCAAGCTaGAGCAGGAAGGTATACAGC +
Preference number: 4 (lower is better)
Translates to: TGVRNPLVEEAELAWARVWLLPS*SRKVYS
Trigger: GCTGTATACCTTCCTGCTGCAGCTTGGCAGCAGCCA...CACCCTTGCCCAGGCCAGCTCAGCCTCCTCCACTAGGGGATTCCGGACCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GGCTCAGCTGAGGAGGAAGAGGCCTACAGGGCTGAAGCTGCCCTTTGCCCCGTGACTTCATCAGTTCCTTaGGGTAGGAGCGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GSAEEEEAYRAEAALCPVTSSVP*GRSGPG
Trigger: CCCTGGCCCGCTCCTACCCCAAGGAACTGATGAAGT...CACGGGGCAAAGGGCAGCTTCAGCCCTGTAGGCCTCTTCCTCCTCAGCTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp CTCTGGGATGTGATGGCCACACAGCCAGGAGCCTGCACTCGGGAGAGCAGTGGATCTGCAGGCAGCGGATaGGCGCGTTCATCACTACAC +
Preference number: 4 (lower is better)
Translates to: LWDVMATQPGACTRESSGSAGSG*ARSSLH
Trigger: GTGTAGTGATGAACGCGCTCATCCGCTGCCTGCAGA...TCCACTGCTCTCCCGAGTGCAGGCTCCTGGCTGTGTGGCCATCACATCCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp ACCCCCACAAAGGCTCAGCTGAGGAGGAAGAGGCCTACAGGGCTGAAGCTGCCCTGTTCAGCTCTTTGCTaGGCCGTAGGCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: TPTKAQLRRKRPTGLKLPCSALC*AVGSSW
Trigger: CCAGCTGGAGCCTACGGCTCAGCAAAGAGCTGAACA...GGGCAGCTTCAGCCCTGTAGGCCTCTTCCTCCTCAGCTGAGCCTTTGTGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp GGGCTGAAGCTGCCCTTTGCCCCGTGGTTGGCTCTGGGATGTGATGGCCACACAGACCCATGCCTAAGGTaGAACCCAGGGCCCTGTACA +
Preference number: 4 (lower is better)
Translates to: GLKLPFAPWLALGCDGHTDPCLR*NPGPCT
Trigger: TGTACAGGGCCCTGGGTTTCACCTTAGGCATGGGTC...TGTGTGGCCATCACATCCCAGAGCCAACCACGGGGCAAAGGGCAGCTTCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp ACAGGGGTCCGGAATCCCCTAGTGGAGGAGGCTGAGCTGGCCTGGGCAAGGGTGGAACGTAGATCTGCATaGGATGGAGATGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: TGVRNPLVEEAELAWARVERRSA*DGDGGP
Trigger: TGGCCCTCCATCTCCATCTCATGCAGATCTACGTTC...CACCCTTGCCCAGGCCAGCTCAGCCTCCTCCACTAGGGGATTCCGGACCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp ACCCCCACAAAGGCTCAGCTGAGGAGGAAGAGGCCTACAGGGCTGAAGCTGCCCCTCCTGGTGGTAGTGTaGCAGCAGGAGGATGCCTTC +
Preference number: 4 (lower is better)
Translates to: TPTKAQLRRKRPTGLKLPLLVVV*QQEDAF
Trigger: GAAGGCATCCTCCTGCTGGCACACTACCACCAGGAG...GGGCAGCTTCAGCCCTGTAGGCCTCTTCCTCCTCAGCTGAGCCTTTGTGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp CTCTGGGATGTGATGGCCACACAGCCAGGAGCCTGCACTCGGGAGAGCAGTGGATCTGCATGCACAGCCTaGCCATCAGGCTCACTCCCT +
Preference number: 4 (lower is better)
Translates to: LWDVMATQPGACTRESSGSACTA*PSGSLP
Trigger: AGGGAGTGAGCCTGATGGCCAGGCTGTGCATGCAGA...TCCACTGCTCTCCCGAGTGCAGGCTCCTGGCTGTGTGGCCATCACATCCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp TGTGAGTACACATCAGGACACATGGGAGAGCATGCTTGTCCACCCCCACAAAGGGTGGCCACACATGCCTaGGCCACGCTGGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: CEYTSGHMGEHACPPPQRVATHA*ATLGQG
Trigger: CCCCTGCCCCAGCGTGGCCCAGGCATGTGTGGCCAC...CCTTTGTGGGGGTGGACAAGCATGCTCTCCCATGTGTCCTGATGTGTACTCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp CACCCCCACAAAGGCTCAGCTGAGGAGGAAGAGGCCTACAGGGCTGAAGCTGCCGGAGGATGCCTTCAATaGGATGTCGCCTCACCTCTG +
Preference number: 4 (lower is better)
Translates to: HPHKGSAEEEEAYRAEAAGGCLQ*DVASPL
Trigger: CAGAGGTGAGGCGACATCTCATTGAAGGCATCCTCC...GGCAGCTTCAGCCCTGTAGGCCTCTTCCTCCTCAGCTGAGCCTTTGTGGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp TTGCCTTGCTGTGGCAGGTGTGACACCGATGAAGCAGTTCACTCGCATCAGGGCCCAAGGCTGCCCTCCTaGCCCCAGCGTCTGAGTCTA +
Preference number: 4 (lower is better)
Translates to: LPCCGRCDTDEAVHSHQGPRLPS*PQRLSL
Trigger: TAGACTCAGACGCTGGGGTCAGGAGGGCAGCCTTGG...GCCCTGATGCGAGTGAACTGCTTCATCGGTGTCACACCTGCCACAGCAAGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
ENSMUST00000135948.2
CDS-3UTR GCA 90 bp CTCTGGGATGTGATGGCCACACAGCCAGGAGCCTGCACTCGGGAGAGCAGTGGACAGCAGCTTCTGGGGTaGAGGCAAGTCCACATGCTT +
Preference number: 4 (lower is better)
Translates to: LWDVMATQPGACTRESSGQQLLG*RQVHML
Trigger: AAGCATGTGGACTTGCCTGCACCCCAGAAGCTGCTG...TCCACTGCTCTCCCGAGTGCAGGCTCCTGGCTGTGTGGCCATCACATCCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp TTGCCTTGCTGTGGCAGGTGTGACACCGATGAAGCAGTTCACTCGCATCAGGGCGCAGTGAACCTCGACTaGAGCCGGCCCAGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: LPCCGRCDTDEAVHSHQGAVNLD*SRPSKP
Trigger: TGGCTTGCTGGGCCGGCTGCAGTCGAGGTTCACTGC...GCCCTGATGCGAGTGAACTGCTTCATCGGTGTCACACCTGCCACAGCAAGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GGCTCAGCTGAGGAGGAAGAGGCCTACAGGGCTGAAGCTGCCCTTTGCCCCGTGGGCATCACAGGTACATaGAGCGATGAGTCCAACCAG +
Preference number: 4 (lower is better)
Translates to: GSAEEEEAYRAEAALCPVGITGT*SDESNQ
Trigger: CTGGTTGGACTCATCGCTCCATGTACCTGTGATGCC...CACGGGGCAAAGGGCAGCTTCAGCCCTGTAGGCCTCTTCCTCCTCAGCTGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp CTCTGGGATGTGATGGCCACACAGCCAGGAGCCTGCACTCGGGAGAGCAGTGGATCCGTGTCTTTGCCATaGATTTGGTTCTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LWDVMATQPGACTRESSGSVSLP*IWFSAR
Trigger: CCTGGCCGAGAACCAAATTCATGGCAAAGACACGGA...TCCACTGCTCTCCCGAGTGCAGGCTCCTGGCTGTGTGGCCATCACATCCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp CATTGGTGCTCTCTGCTGGCAGTGACAAACATGGTGTGTCTTCCTTCACCTGTGGGCTGTCCACGTGGGTaGGGAGCATCTGGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: HWCSLLAVTNMVCLPSPVGCPRG*GASGGG
Trigger: GCCACCCCCAGATGCTCCTCACCCACGTGGACAGCC...CACAGGTGAAGGAAGACACACCATGTTTGTCACTGCCAGCAGAGAGCACCAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp CATTGGTGCTCTCTGCTGGCAGTGACAAACATGGTGTGTCTTCCTTCACCTGTGGCACTGCTGCTCACCTaGCCCTGCAGGGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: HWCSLLAVTNMVCLPSPVALLLT*PCREPR
Trigger: CCTGGGCTCCCTGCAGGGGCAGGTGAGCAGCAGTGC...CACAGGTGAAGGAAGACACACCATGTTTGTCACTGCCAGCAGAGAGCACCAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp GGGCTGAAGCTGCCCTTTGCCCCGTGGTTGGCTCTGGGATGTGATGGCCACACAGCGTCTGAGTCTAGCTaGAGGTCCTGGAGAGAATTG +
Preference number: 4 (lower is better)
Translates to: GLKLPFAPWLALGCDGHTASESS*RSWREL
Trigger: CAATTCTCTCCAGGACCTGCAGCTAGACTCAGACGC...TGTGTGGCCATCACATCCCAGAGCCAACCACGGGGCAAAGGGCAGCTTCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp ACCCCCACAAAGGCTCAGCTGAGGAGGAAGAGGCCTACAGGGCTGAAGCTGCCCGGCATCACAGGTACATaGAGCGATGAGTCCAACCAG +
Preference number: 4 (lower is better)
Translates to: TPTKAQLRRKRPTGLKLPGITGT*SDESNQ
Trigger: CTGGTTGGACTCATCGCTCCATGTACCTGTGATGCC...GGGCAGCTTCAGCCCTGTAGGCCTCTTCCTCCTCAGCTGAGCCTTTGTGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp ACAGGGGTCCGGAATCCCCTAGTGGAGGAGGCTGAGCTGGCCTGGGCAAGGGTGTTCTCACAGAGCTTCTaGATGAGAGAGACAACCTCG +
Preference number: 4 (lower is better)
Translates to: TGVRNPLVEEAELAWARVFSQSF*MRETTS
Trigger: CGAGGTTGTCTCTCTCATCCAGAAGCTCTGTGAGAA...CACCCTTGCCCAGGCCAGCTCAGCCTCCTCCACTAGGGGATTCCGGACCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GTAAGAGACGCTTCTCACCCATTGGTGCTCTCTGCTGGCAGTGACAAACATGGTATGCCTGGGCCACGCTaGGGCAGGGGTCCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: VRDASHPLVLSAGSDKHGMPGPR*GRGPGS
Trigger: ACTGCCAGGACCCCTGCCCCAGCGTGGCCCAGGCAT...ACCATGTTTGTCACTGCCAGCAGAGAGCACCAATGGGTGAGAAGCGTCTCTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp CACCCCCACAAAGGCTCAGCTGAGGAGGAAGAGGCCTACAGGGCTGAAGCTGCCTCCCACGGGTCTTCTTaGGGGAGTTTCTCAGAAACT +
Preference number: 4 (lower is better)
Translates to: HPHKGSAEEEEAYRAEAASHGSS*GSFSET
Trigger: AGTTTCTGAGAAACTCCCTCAAGAAGACCCGTGGGA...GGCAGCTTCAGCCCTGTAGGCCTCTTCCTCCTCAGCTGAGCCTTTGTGGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp GAGCCCTGGGCACAGATGTGTGTGCATATGTTACGTGACACATCCTGGGCTAGTCCAAGGCTGCCCTCCTaGCCCCAGCGTCTGAGTCTA +
Preference number: 4 (lower is better)
Translates to: EPWAQMCVHMLRDTSWASPRLPS*PQRLSL
Trigger: TAGACTCAGACGCTGGGGTCAGGAGGGCAGCCTTGG...ACTAGCCCAGGATGTGTCACGTAACATATGCACACACATCTGTGCCCAGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp TTGCCTTGCTGTGGCAGGTGTGACACCGATGAAGCAGTTCACTCGCATCAGGGCGAAATCTCTGGCATCTaGAGGCAGCGGATGAGCGCG +
Preference number: 4 (lower is better)
Translates to: LPCCGRCDTDEAVHSHQGEISGI*RQRMSA
Trigger: CGCGCTCATCCGCTGCCTGCAGATGCCAGAGATTTC...GCCCTGATGCGAGTGAACTGCTTCATCGGTGTCACACCTGCCACAGCAAGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp CTCTGGGATGTGATGGCCACACAGCCAGGAGCCTGCACTCGGGAGAGCAGTGGATCTGCTTGGAGGCAATaGCCACCAGCCTTTGTATAC +
Preference number: 4 (lower is better)
Translates to: LWDVMATQPGACTRESSGSAWRQ*PPAFVY
Trigger: GTATACAAAGGCTGGTGGCCATTGCCTCCAAGCAGA...TCCACTGCTCTCCCGAGTGCAGGCTCCTGGCTGTGTGGCCATCACATCCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp CACCCCCACAAAGGCTCAGCTGAGGAGGAAGAGGCCTACAGGGCTGAAGCTGCCGCCAGATGTCAGCCTTaGAGGTGGCATTTATCTTGG +
Preference number: 4 (lower is better)
Translates to: HPHKGSAEEEEAYRAEAAARCQP*RWHLSW
Trigger: CCAAGATAAATGCCACCTCCAAGGCTGACATCTGGC...GGCAGCTTCAGCCCTGTAGGCCTCTTCCTCCTCAGCTGAGCCTTTGTGGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR CAA 72 bp AGTAGGCATGACCTCTGTAGCGAGACCAACCCTTCTTaGGGCCTGACCCTTCCTGAGAACACAGGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: SRHDLCSETNPS*GLTLPENTGVR
Trigger: CCGGACCCCTGTGTTCTCAGGAAGGGTCAGGCCCAAAGAAGGGTTGGTCTCGCTACAGAGGTCATGCCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp ACCCCCACAAAGGCTCAGCTGAGGAGGAAGAGGCCTACAGGGCTGAAGCTGCCCCAGAAATGCACACACTaGAACATGGTGGCCACACAT +
Preference number: 4 (lower is better)
Translates to: TPTKAQLRRKRPTGLKLPQKCTH*NMVATH
Trigger: ATGTGTGGCCACCATGTTTCAGTGTGTGCATTTCTG...GGGCAGCTTCAGCCCTGTAGGCCTCTTCCTCCTCAGCTGAGCCTTTGTGGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp CTCTCTGCTGGCAGTGACAAACATGGTGTGTCTTCCTTCACCTGTGGTGATTTTGCACTGCTGCTCACCTaGCCCTGCAGGGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LSAGSDKHGVSSFTCGDFALLLT*PCREPR
Trigger: CCTGGGCTCCCTGCAGGGGCAGGTGAGCAGCAGTGC...AAAATCACCACAGGTGAAGGAAGACACACCATGTTTGTCACTGCCAGCAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp ACAGGGGTCCGGAATCCCCTAGTGGAGGAGGCTGAGCTGGCCTGGGCAAGGGTGGAAGTATCGGTACATTaGGAAGAGCTTCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: TGVRNPLVEEAELAWARVEVSVH*EELHSK
Trigger: TTTGCTGTGAAGCTCTTCCCAATGTACCGATACTTC...CACCCTTGCCCAGGCCAGCTCAGCCTCCTCCACTAGGGGATTCCGGACCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp CTCTGGGATGTGATGGCCACACAGCCAGGAGCCTGCACTCGGGAGAGCAGTGGACCTTTGATCTTTTCCTaGAAGCCTGACAGAACCAGC +
Preference number: 4 (lower is better)
Translates to: LWDVMATQPGACTRESSGPLIFS*KPDRTS
Trigger: GCTGGTTCTGTCAGGCTTCCAGGAAAAGATCAAAGG...TCCACTGCTCTCCCGAGTGCAGGCTCCTGGCTGTGTGGCCATCACATCCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GGCTCAGCTGAGGAGGAAGAGGCCTACAGGGCTGAAGCTGCCCTTTGCCCCGTGGTAAGAGCAGATTTGTaGGCAAACTGGAAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: GSAEEEEAYRAEAALCPVVRADL*ANWKSS
Trigger: AGAGGACTTCCAGTTTGCCCACAAATCTGCTCTTAC...CACGGGGCAAAGGGCAGCTTCAGCCCTGTAGGCCTCTTCCTCCTCAGCTGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp CTCTGGGATGTGATGGCCACACAGCCAGGAGCCTGCACTCGGGAGAGCAGTGGATGTTCAGGAGGTTGGTaGCTTGGAAGAATGTACCAT +
Preference number: 4 (lower is better)
Translates to: LWDVMATQPGACTRESSGCSGGW*LGRMYH
Trigger: ATGGTACATTCTTCCAAGTCACCAACCTCCTGAACA...TCCACTGCTCTCCCGAGTGCAGGCTCCTGGCTGTGTGGCCATCACATCCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp CATTGGTGCTCTCTGCTGGCAGTGACAAACATGGTGTGTCTTCCTTCACCTGTGTCAGGTTCTGACTGCTaGACTGCTGCTGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: HWCSLLAVTNMVCLPSPVSGSDC*TAAGLG
Trigger: CCCCAGCCCAGCAGCAGTTCAGCAGTCAGAACCTGA...CACAGGTGAAGGAAGACACACCATGTTTGTCACTGCCAGCAGAGAGCACCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp ATGCATCTGCCTTTTTGCTTTAGGAACAAGGTCCCTGGGGACAGGCTGGGCAGTGACCCATGCCTAAGGTaGAACCCAGGGCCCTGTACA +
Preference number: 4 (lower is better)
Translates to: MHLPFCFRNKVPGDRLGSDPCLR*NPGPCT
Trigger: TGTACAGGGCCCTGGGTTTCACCTTAGGCATGGGTC...ACTGCCCAGCCTGTCCCCAGGGACCTTGTTCCTAAAGCAAAAAGGCAGATGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp GAGAGCAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTCGGAGCCCATGCCCGTaGGCACCAGCTCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: ESSGDIFQRERRVGYPFFRSPCP*APALPA
Trigger: GGCTGGCAGAGCTGGTGCTCACGGGCATGGGCTCCG...AAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp GATGTAAGAGACGCTTCTCACCCATTGGTGCTCTCTGCTGGCAGTGACAAACATCCAAGGCTGCCCTCCTaGCCCCAGCGTCTGAGTCTA +
Preference number: 4 (lower is better)
Translates to: DVRDASHPLVLSAGSDKHPRLPS*PQRLSL
Trigger: TAGACTCAGACGCTGGGGTCAGGAGGGCAGCCTTGG...ATGTTTGTCACTGCCAGCAGAGAGCACCAATGGGTGAGAAGCGTCTCTTACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp GTAAGAGACGCTTCTCACCCATTGGTGCTCTCTGCTGGCAGTGACAAACATGGTCTTCTGGCCCATGGCTaGTGCCAAGCTGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: VRDASHPLVLSAGSDKHGLLAHG*CQAAAG
Trigger: TCCTGCTGCAGCTTGGCAGCAGCCATGGGCCAGAAG...ACCATGTTTGTCACTGCCAGCAGAGAGCACCAATGGGTGAGAAGCGTCTCTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp TTGCCTTGCTGTGGCAGGTGTGACACCGATGAAGCAGTTCACTCGCATCAGGGCGCGTCTGAGTCTAGCTaGAGGTCCTGGAGAGAATTG +
Preference number: 4 (lower is better)
Translates to: LPCCGRCDTDEAVHSHQGASESS*RSWREL
Trigger: CAATTCTCTCCAGGACCTGCAGCTAGACTCAGACGC...GCCCTGATGCGAGTGAACTGCTTCATCGGTGTCACACCTGCCACAGCAAGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
ENSMUST00000135948.2
CDS-3UTR CCA 90 bp TTGCCTTGCTGTGGCAGGTGTGACACCGATGAAGCAGTTCACTCGCATCAGGGCAGCTTCACAGCAAACTaGTCCTCCGTCATCACGGGA +
Preference number: 4 (lower is better)
Translates to: LPCCGRCDTDEAVHSHQGSFTAN*SSVITG
Trigger: TCCCGTGATGACGGAGGACCAGTTTGCTGTGAAGCT...GCCCTGATGCGAGTGAACTGCTTCATCGGTGTCACACCTGCCACAGCAAGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp ACAGGGGTCCGGAATCCCCTAGTGGAGGAGGCTGAGCTGGCCTGGGCAAGGGTGGTAGATAAGGTGAGCTaGACAGACACATATTTCAGA +
Preference number: 4 (lower is better)
Translates to: TGVRNPLVEEAELAWARVVDKVS*TDTYFR
Trigger: TCTGAAATATGTGTCTGTCCAGCTCACCTTATCTAC...CACCCTTGCCCAGGCCAGCTCAGCCTCCTCCACTAGGGGATTCCGGACCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GGGCTGAAGCTGCCCTTTGCCCCGTGGTTGGCTCTGGGATGTGATGGCCACACACTCTGTGCTTTCCTCTaGAGAGTAGAAAGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: GLKLPFAPWLALGCDGHTLCAFL*RVERLH
Trigger: ATGAAGCCTTTCTACTCTCCAGAGGAAAGCACAGAG...TGTGTGGCCATCACATCCCAGAGCCAACCACGGGGCAAAGGGCAGCTTCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR CAA 72 bp GGCACTAAGGATGAACCCAAGCTTCGTGCTTGCTTGTaGAGCGCTGACAGCCCCACACCCCAATCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: GTKDEPKLRACL*SADSPTPQSAF
Trigger: GAAAGCAGATTGGGGTGTGGGGCTGTCAGCGCTCAACAAGCAAGCACGAAGCTTGGGTTCATCCTTAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp TTGCCTTGCTGTGGCAGGTGTGACACCGATGAAGCAGTTCACTCGCATCAGGGCTCCCACGGGTCTTCTTaGGGGAGTTTCTCAGAAACT +
Preference number: 4 (lower is better)
Translates to: LPCCGRCDTDEAVHSHQGSHGSS*GSFSET
Trigger: AGTTTCTGAGAAACTCCCTCAAGAAGACCCGTGGGA...GCCCTGATGCGAGTGAACTGCTTCATCGGTGTCACACCTGCCACAGCAAGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp AGCCCAGGCCTGACTTCACCCAATTCTCTAGTTTACTGTTTGTCTGCTTGGGCGTGTTCAGCTCTTTGCTaGGCCGTAGGCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SPGLTSPNSLVYCLSAWACSALC*AVGSSW
Trigger: CCAGCTGGAGCCTACGGCTCAGCAAAGAGCTGAACA...CGCCCAAGCAGACAAACAGTAAACTAGAGAATTGGGTGAAGTCAGGCCTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp CACACCACCCCATCTCATGTTATACAGATCACAAATAACCTCCCCTCTGTGATTGGCTGTCCACGTGGGTaGGGAGCATCTGGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: HTTPSHVIQITNNLPSVIGCPRG*GASGGG
Trigger: GCCACCCCCAGATGCTCCTCACCCACGTGGACAGCC...AATCACAGAGGGGAGGTTATTTGTGATCTGTATAACATGAGATGGGGTGGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp CTCTGGGATGTGATGGCCACACAGCCAGGAGCCTGCACTCGGGAGAGCAGTGGATGCAGGCAGCAATTCTaGTCCTTGACAGATTGTTTT +
Preference number: 4 (lower is better)
Translates to: LWDVMATQPGACTRESSGCRQQF*SLTDCF
Trigger: AAAACAATCTGTCAAGGATCAGAATTGCTGCCTGCA...TCCACTGCTCTCCCGAGTGCAGGCTCCTGGCTGTGTGGCCATCACATCCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp GGCTCAGCTGAGGAGGAAGAGGCCTACAGGGCTGAAGCTGCCCTTTGCCCCGTGCTCTTGACCAAAAGCTaGATGGATTTGATAGTGATC +
Preference number: 4 (lower is better)
Translates to: GSAEEEEAYRAEAALCPVLLTKS*MDLIVI
Trigger: GATCACTATCAAATCCATGCAGCTTTTGGTCAAGAG...CACGGGGCAAAGGGCAGCTTCAGCCCTGTAGGCCTCTTCCTCCTCAGCTGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp ATGAACCTCCAGAGTAGGCATGACCTCTGTAGCGAGACCAACCCTTCTTTGGGCGTCTCATCTTTGTCCTaGCCTGCACCCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: MNLQSRHDLCSETNPSLGVSSLS*PAPFSS
Trigger: GCTGGAGAAGGGTGCAGGGCAGGACAAAGATGAGAC...GCCCAAAGAAGGGTTGGTCTCGCTACAGAGGTCATGCCTACTCTGGAGGTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp TTGCCTTGCTGTGGCAGGTGTGACACCGATGAAGCAGTTCACTCGCATCAGGGCATGACCAAGCTGAAGTaGTTTCGGGACAGAGCCACT +
Preference number: 4 (lower is better)
Translates to: LPCCGRCDTDEAVHSHQGMTKLK*FRDRAT
Trigger: AGTGGCTCTGTCCCGAAACCACTTCAGCTTGGTCAT...GCCCTGATGCGAGTGAACTGCTTCATCGGTGTCACACCTGCCACAGCAAGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GTTGAGCCCAGACAACACTGCACTGGGTTCAGGGCTTCATCTGAATTTGAAGAAGAACTGCTGCTGGGCTaGGGCCTTGGAGCACACCTG +
Preference number: 4 (lower is better)
Translates to: VEPRQHCTGFRASSEFEEELLLG*GLGAHL
Trigger: CAGGTGTGCTCCAAGGCCCCAGCCCAGCAGCAGTTC...TTCTTCAAATTCAGATGAAGCCCTGAACCCAGTGCAGTGTTGTCTGGGCTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GTTGAGCCCAGACAACACTGCACTGGGTTCAGGGCTTCATCTGAATTTGAAGAACTGCTGAACTGCTGCTaGGCTGGGGCCTTGGAGCAC +
Preference number: 4 (lower is better)
Translates to: VEPRQHCTGFRASSEFEELLNCC*AGALEH
Trigger: GTGCTCCAAGGCCCCAGCCCAGCAGCAGTTCAGCAG...TTCTTCAAATTCAGATGAAGCCCTGAACCCAGTGCAGTGTTGTCTGGGCTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp TGTGAGTACACATCAGGACACATGGGAGAGCATGCTTGTCCACCCCCACAAAGGTCTTCCCCTGGGGGTTaGAGGGAGATAACGGTGTGT +
Preference number: 4 (lower is better)
Translates to: CEYTSGHMGEHACPPPQRSSPGG*REITVC
Trigger: ACACACCGTTATCTCCCTCCAACCCCCAGGGGAAGA...CCTTTGTGGGGGTGGACAAGCATGCTCTCCCATGTGTCCTGATGTGTACTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp CTCTCTGCTGGCAGTGACAAACATGGTGTGTCTTCCTTCACCTGTGGTGATTTTGCAGCTTCTGGCCCATaGCTGCTGCCAAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LSAGSDKHGVSSFTCGDFAASGP*LLPSCS
Trigger: GCTGCAGCTTGGCAGCAGCCATGGGCCAGAAGCTGC...AAAATCACCACAGGTGAAGGAAGACACACCATGTTTGTCACTGCCAGCAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp ATGAACCTCCAGAGTAGGCATGACCTCTGTAGCGAGACCAACCCTTCTTTGGGCCACACTGAAACATGGTaGCCACACATGCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: MNLQSRHDLCSETNPSLGHTETW*PHMPGP
Trigger: TGGCCCAGGCATGTGTGGCCACCATGTTTCAGTGTG...GCCCAAAGAAGGGTTGGTCTCGCTACAGAGGTCATGCCTACTCTGGAGGTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp ATGAACCTCCAGAGTAGGCATGACCTCTGTAGCGAGACCAACCCTTCTTTGGGCGGACGTGCAACTCTGTaGAAATGGGGTGTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: MNLQSRHDLCSETNPSLGGRATL*KWGVAA
Trigger: TGCTGCTACACCCCATTTTCACAGAGTTGCACGTCC...GCCCAAAGAAGGGTTGGTCTCGCTACAGAGGTCATGCCTACTCTGGAGGTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp GAGCCCTGGGCACAGATGTGTGTGCATATGTTACGTGACACATCCTGGGCTAGTCTTTTCCTGGAAGCCTaGCAGAACCAGCTGGCCAAT +
Preference number: 4 (lower is better)
Translates to: EPWAQMCVHMLRDTSWASLFLEA*QNQLAN
Trigger: ATTGGCCAGCTGGTTCTGTCAGGCTTCCAGGAAAAG...ACTAGCCCAGGATGTGTCACGTAACATATGCACACACATCTGTGCCCAGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp TGTGAGTACACATCAGGACACATGGGAGAGCATGCTTGTCCACCCCCACAAAGGTCCGTGTCTTTGCCATaGATTTGGTTCTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: CEYTSGHMGEHACPPPQRSVSLP*IWFSAR
Trigger: CCTGGCCGAGAACCAAATTCATGGCAAAGACACGGA...CCTTTGTGGGGGTGGACAAGCATGCTCTCCCATGTGTCCTGATGTGTACTCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp AGCCCAGGCCTGACTTCACCCAATTCTCTAGTTTACTGTTTGTCTGCTTGGGCGCACAGAGCTTCTGGATaGGAGAGACAACCTCGTCGC +
Preference number: 4 (lower is better)
Translates to: SPGLTSPNSLVYCLSAWAHRASG*ERQPRR
Trigger: GCGACGAGGTTGTCTCTCTCATCCAGAAGCTCTGTG...CGCCCAAGCAGACAAACAGTAAACTAGAGAATTGGGTGAAGTCAGGCCTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp TGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGCGGAGCCCATGCCCGTaGGCACCAGCTCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: WRYISEGEESWIPILLQQRSPCP*APALPA
Trigger: GGCTGGCAGAGCTGGTGCTCACGGGCATGGGCTCCG...CTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp CATTGGTGCTCTCTGCTGGCAGTGACAAACATGGTGTGTCTTCCTTCACCTGTGGTGATATCCCGCATCTaGTTGGAGGCAATGGCCACC +
Preference number: 4 (lower is better)
Translates to: HWCSLLAVTNMVCLPSPVVISRI*LEAMAT
Trigger: GGTGGCCATTGCCTCCAAGCAGATGCGGGATATCAC...CACAGGTGAAGGAAGACACACCATGTTTGTCACTGCCAGCAGAGAGCACCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp CATTGGTGCTCTCTGCTGGCAGTGACAAACATGGTGTGTCTTCCTTCACCTGTGCAGCAGCTTCTGGGGTaGAGGCAAGTCCACATGCTT +
Preference number: 4 (lower is better)
Translates to: HWCSLLAVTNMVCLPSPVQQLLG*RQVHML
Trigger: AAGCATGTGGACTTGCCTGCACCCCAGAAGCTGCTG...CACAGGTGAAGGAAGACACACCATGTTTGTCACTGCCAGCAGAGAGCACCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp AGCCCAGGCCTGACTTCACCCAATTCTCTAGTTTACTGTTTGTCTGCTTGGGCGAGCAGCTTCTCCTGGTaGAGAACTGGGTCGCTCATG +
Preference number: 4 (lower is better)
Translates to: SPGLTSPNSLVYCLSAWASSFSW*RTGSLM
Trigger: CATGAGCGACCCAGTTCTGCACCAGGAGAAGCTGCT...CGCCCAAGCAGACAAACAGTAAACTAGAGAATTGGGTGAAGTCAGGCCTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp TGTGAGTACACATCAGGACACATGGGAGAGCATGCTTGTCCACCCCCACAAAGGGGTCCTGGAGAGAATTaGGAAGTCCCACAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: CEYTSGHMGEHACPPPQRGPGEN*EVPQGP
Trigger: TGGACCTTGTGGGACTTCGCAATTCTCTCCAGGACC...CCTTTGTGGGGGTGGACAAGCATGCTCTCCCATGTGTCCTGATGTGTACTCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp ATGAACCTCCAGAGTAGGCATGACCTCTGTAGCGAGACCAACCCTTCTTTGGGCGCACTACAGATCACCTaGCGCATCTTGGCTTCGTTG +
Preference number: 4 (lower is better)
Translates to: MNLQSRHDLCSETNPSLGALQIT*RILASL
Trigger: CAACGAAGCCAAGATGCGCCAGGTGATCTGTAGTGC...GCCCAAAGAAGGGTTGGTCTCGCTACAGAGGTCATGCCTACTCTGGAGGTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp AGAGCAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTATGCCTGGGCCACGCTaGGGCAGGGGTCCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: RAVEIYFRGRGELDTHSFMPGPR*GRGPGS
Trigger: ACTGCCAGGACCCCTGCCCCAGCGTGGCCCAGGCAT...AAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
ENSMUST00000135948.2
CDS-3UTR CCA 90 bp TGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGGTGGCCACACATGCCTaGGCCACGCTGGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: WRYISEGEESWIPILLQQVATHA*ATLGQG
Trigger: CCCCTGCCCCAGCGTGGCCCAGGCATGTGTGGCCAC...CTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
ENSMUST00000135948.2
CDS-3UTR TCA 90 bp ATGAACCTCCAGAGTAGGCATGACCTCTGTAGCGAGACCAACCCTTCTTTGGGCTGTAGTCTGTCTCCATaGTGTAGCACAGGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: MNLQSRHDLCSETNPSLGCSLSP*CSTGAS
Trigger: TGAGGCTCCTGTGCTACATCATGGAGACAGACTACA...GCCCAAAGAAGGGTTGGTCTCGCTACAGAGGTCATGCCTACTCTGGAGGTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp GAGCCCTGGGCACAGATGTGTGTGCATATGTTACGTGACACATCCTGGGCTAGTGGTCCATCTTTTCCATaGGGAGCTGGATGGTACACA +
Preference number: 4 (lower is better)
Translates to: EPWAQMCVHMLRDTSWASGPSFP*GAGWYT
Trigger: TGTGTACCATCCAGCTCCTCATGGAAAAGATGGACC...ACTAGCCCAGGATGTGTCACGTAACATATGCACACACATCTGTGCCCAGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp GGAGAGCAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTAGCTGTCCAGGACTTTaGGGGTCTCCAAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GEQWRYISEGEESWIPILSCPGL*GSPRLP
Trigger: GGGCAGCCTTGGAGACCCTCAAAGTCCTGGACAGCT...AAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
ENSMUST00000135948.2
CDS-3UTR GCA 90 bp GGAGAGCAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTAGATGCACAGTGTCCTaGAGCCCCTTGGGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GEQWRYISEGEESWIPILRCTVS*SPLGSS
Trigger: GCTGGACCCCAAGGGGCTGCAGGACACTGTGCATCT...AAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp GATGTAAGAGACGCTTCTCACCCATTGGTGCTCTCTGCTGGCAGTGACAAACATTGGCTGCTGCCAAGCTaGAGCAGGAAGGTATACAGC +
Preference number: 4 (lower is better)
Translates to: DVRDASHPLVLSAGSDKHWLLPS*SRKVYS
Trigger: GCTGTATACCTTCCTGCTGCAGCTTGGCAGCAGCCA...ATGTTTGTCACTGCCAGCAGAGAGCACCAATGGGTGAGAAGCGTCTCTTACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp AGAGCAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTCTGCTCACCTGCCCCTaGAGGGAGCCCAGGCACTTC +
Preference number: 4 (lower is better)
Translates to: RAVEIYFRGRGELDTHSFLLTCP*REPRHF
Trigger: GAAGTGCCTGGGCTCCCTGCAGGGGCAGGTGAGCAG...AAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp GTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACACCGCCATGGCACTGCTaGTCACCTGCCCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: VEIYFRGRGELDTHSFTTPPWHC*SPAPAG
Trigger: CCCTGCAGGGGCAGGTGAGCAGCAGTGCCATGGCGG...TGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp AGCCCAGGCCTGACTTCACCCAATTCTCTAGTTTACTGTTTGTCTGCTTGGGCGTCACCTGGCGCATCTTaGCTTCGTTGGCAAGTCTCA +
Preference number: 4 (lower is better)
Translates to: SPGLTSPNSLVYCLSAWASPGAS*LRWQVS
Trigger: TGAGACTTGCCAACGAAGCCAAGATGCGCCAGGTGA...CGCCCAAGCAGACAAACAGTAAACTAGAGAATTGGGTGAAGTCAGGCCTGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp CATTGGTGCTCTCTGCTGGCAGTGACAAACATGGTGTGTCTTCCTTCACCTGTGCACAGAACGTCTCCATaGCACTACAGATCACCTGGC +
Preference number: 4 (lower is better)
Translates to: HWCSLLAVTNMVCLPSPVHRTSP*HYRSPG
Trigger: GCCAGGTGATCTGTAGTGCCATGGAGACGTTCTGTG...CACAGGTGAAGGAAGACACACCATGTTTGTCACTGCCAGCAGAGAGCACCAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GTAAGAGACGCTTCTCACCCATTGGTGCTCTCTGCTGGCAGTGACAAACATGGTAGCTTCACAGCAAACTaGTCCTCCGTCATCACGGGA +
Preference number: 4 (lower is better)
Translates to: VRDASHPLVLSAGSDKHGSFTAN*SSVITG
Trigger: TCCCGTGATGACGGAGGACCAGTTTGCTGTGAAGCT...ACCATGTTTGTCACTGCCAGCAGAGAGCACCAATGGGTGAGAAGCGTCTCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GAGTGGTTACAAAAGCCCAGGCCTGACTTCACCCAATTCTCTAGTTTACTGTTTCTGCTGAACTGCTGCTaGGCTGGGGCCTTGGAGCAC +
Preference number: 4 (lower is better)
Translates to: EWLQKPRPDFTQFSSLLFLLNCC*AGALEH
Trigger: GTGCTCCAAGGCCCCAGCCCAGCAGCAGTTCAGCAG...AAACAGTAAACTAGAGAATTGGGTGAAGTCAGGCCTGGGCTTTTGTAACCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GTAAGAGACGCTTCTCACCCATTGGTGCTCTCTGCTGGCAGTGACAAACATGGTCCACCTTGGCGACTCTaGAGGAAGCACTGGAAATCT +
Preference number: 4 (lower is better)
Translates to: VRDASHPLVLSAGSDKHGPPWRL*RKHWKS
Trigger: AGATTTCCAGTGCTTCCTCCAGAGTCGCCAAGGTGG...ACCATGTTTGTCACTGCCAGCAGAGAGCACCAATGGGTGAGAAGCGTCTCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp CATTGGTGCTCTCTGCTGGCAGTGACAAACATGGTGTGTCTTCCTTCACCTGTGTCCTTGACCCGCATCTaGAGGAAGATGCCTATCCAG +
Preference number: 4 (lower is better)
Translates to: HWCSLLAVTNMVCLPSPVSLTRI*RKMPIQ
Trigger: CTGGATAGGCATCTTCCTCCAGATGCGGGTCAAGGA...CACAGGTGAAGGAAGACACACCATGTTTGTCACTGCCAGCAGAGAGCACCAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp CACACCACCCCATCTCATGTTATACAGATCACAAATAACCTCCCCTCTGTGATTCGGCCCAGCAAGCCATaGAGCATGGTCCGTGCGAAG +
Preference number: 4 (lower is better)
Translates to: HTTPSHVIQITNNLPSVIRPSKP*SMVRAK
Trigger: CTTCGCACGGACCATGCTCCATGGCTTGCTGGGCCG...AATCACAGAGGGGAGGTTATTTGTGATCTGTATAACATGAGATGGGGTGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GTTGAGCCCAGACAACACTGCACTGGGTTCAGGGCTTCATCTGAATTTGAAGAACTCAGCAGCTTCTCCTaGTGCAGAACTGGGTCGCTC +
Preference number: 4 (lower is better)
Translates to: VEPRQHCTGFRASSEFEELSSFS*CRTGSL
Trigger: GAGCGACCCAGTTCTGCACCAGGAGAAGCTGCTGAG...TTCTTCAAATTCAGATGAAGCCCTGAACCCAGTGCAGTGTTGTCTGGGCTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp ATGCATCTGCCTTTTTGCTTTAGGAACAAGGTCCCTGGGGACAGGCTGGGCAGTTTCCCACTCTTTCTCTaGCAAGATCCACTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: MHLPFCFRNKVPGDRLGSFPLFL*QDPLLQ
Trigger: CTGGAGAAGTGGATCTTGTCAGAGAAAGAGTGGGAA...ACTGCCCAGCCTGTCCCCAGGGACCTTGTTCCTAAAGCAAAAAGGCAGATGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp GTTGAGCCCAGACAACACTGCACTGGGTTCAGGGCTTCATCTGAATTTGAAGAAGTCTCAGAAGTGATGTaGGGACGGTCTCCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: VEPRQHCTGFRASSEFEEVSEVM*GRSPGG
Trigger: ACCACCAGGAGACCGTCCTCACATCACTTCTGAGAC...TTCTTCAAATTCAGATGAAGCCCTGAACCCAGTGCAGTGTTGTCTGGGCTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp AGCCCAGGCCTGACTTCACCCAATTCTCTAGTTTACTGTTTGTCTGCTTGGGCGGGTCCATCTTTTCCATaGGGAGCTGGATGGTACACA +
Preference number: 4 (lower is better)
Translates to: SPGLTSPNSLVYCLSAWAGPSFP*GAGWYT
Trigger: TGTGTACCATCCAGCTCCTCATGGAAAAGATGGACC...CGCCCAAGCAGACAAACAGTAAACTAGAGAATTGGGTGAAGTCAGGCCTGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp TTGCCTTGCTGTGGCAGGTGTGACACCGATGAAGCAGTTCACTCGCATCAGGGCTGCAGGCAGCAATTCTaGTCCTTGACAGATTGTTTT +
Preference number: 4 (lower is better)
Translates to: LPCCGRCDTDEAVHSHQGCRQQF*SLTDCF
Trigger: AAAACAATCTGTCAAGGATCAGAATTGCTGCCTGCA...GCCCTGATGCGAGTGAACTGCTTCATCGGTGTCACACCTGCCACAGCAAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
ENSMUST00000135948.2
CDS-3UTR GCA 90 bp GGAGAGCAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTGAAATCTCTGGCATCTaGAGGCAGCGGATGAGCGCG +
Preference number: 4 (lower is better)
Translates to: GEQWRYISEGEESWIPILEISGI*RQRMSA
Trigger: CGCGCTCATCCGCTGCCTGCAGATGCCAGAGATTTC...AAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp TGTTGGTATAGCAATAAATCTGAGAGCCTGGCACCTTGCAGGATGCCTATTTTGAGATGCACAGTGTCCTaGAGCCCCTTGGGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: CWYSNKSESLAPCRMPILRCTVS*SPLGSS
Trigger: GCTGGACCCCAAGGGGCTGCAGGACACTGTGCATCT...CAAAATAGGCATCCTGCAAGGTGCCAGGCTCTCAGATTTATTGCTATACCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp TGTGAGTACACATCAGGACACATGGGAGAGCATGCTTGTCCACCCCCACAAAGGGATGCTTCTAGAATCTaGCTCAAGACCTGTGTGACG +
Preference number: 4 (lower is better)
Translates to: CEYTSGHMGEHACPPPQRDASRI*LKTCVT
Trigger: CGTCACACAGGTCTTGAGGCAGATTCTAGAAGCATC...CCTTTGTGGGGGTGGACAAGCATGCTCTCCCATGTGTCCTGATGTGTACTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GTTGAGCCCAGACAACACTGCACTGGGTTCAGGGCTTCATCTGAATTTGAAGAACCAGGCCTGGCCCTGTaGTGTCTGTCTTTGCTGATT +
Preference number: 4 (lower is better)
Translates to: VEPRQHCTGFRASSEFEEPGLAL*CLSLLI
Trigger: AATCAGCAAAGACAGACACCACAGGGCCAGGCCTGG...TTCTTCAAATTCAGATGAAGCCCTGAACCCAGTGCAGTGTTGTCTGGGCTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GGAGAGCAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTATCCCGCATCTGCTTaGAGGCAATGGCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: GEQWRYISEGEESWIPILYPASA*RQWPPA
Trigger: GGCTGGTGGCCATTGCCTCCAAGCAGATGCGGGATA...AAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp ATGCATCTGCCTTTTTGCTTTAGGAACAAGGTCCCTGGGGACAGGCTGGGCAGTCCTTTGATCTTTTCCTaGAAGCCTGACAGAACCAGC +
Preference number: 4 (lower is better)
Translates to: MHLPFCFRNKVPGDRLGSPLIFS*KPDRTS
Trigger: GCTGGTTCTGTCAGGCTTCCAGGAAAAGATCAAAGG...ACTGCCCAGCCTGTCCCCAGGGACCTTGTTCCTAAAGCAAAAAGGCAGATGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp AGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACAAATGAAGTGGCCACACATGCCTaGGCCACGCTGGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: RERRVGYPFFYNSFSTNEVATHA*ATLGQG
Trigger: CCCCTGCCCCAGCGTGGCCCAGGCATGTGTGGCCAC...TTCATTTGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
ENSMUST00000135948.2
3UTR CAA 72 bp GCTACTCTGCAGGTTTGCTTCACAGTTGACAGGAGCTaGCCCCAAGGGAGCACTTCTTATATTGGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: ATLQVCFTVDRS*PQGSTSYIGGV
Trigger: CACACCTCCAATATAAGAAGTGCTCCCTTGGGGCAAGCTCCTGTCAACTGTGAAGCAAACCTGCAGAGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp ATGCATCTGCCTTTTTGCTTTAGGAACAAGGTCCCTGGGGACAGGCTGGGCAGTGGTGTCTGTCTTTGCTaGTTCACTGTCCATGATGTT +
Preference number: 4 (lower is better)
Translates to: MHLPFCFRNKVPGDRLGSGVCLC*FTVHDV
Trigger: AACATCATGGACAGTGAATCAGCAAAGACAGACACC...ACTGCCCAGCCTGTCCCCAGGGACCTTGTTCCTAAAGCAAAAAGGCAGATGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp TGTTGGTATAGCAATAAATCTGAGAGCCTGGCACCTTGCAGGATGCCTATTTTGTCTGCAGGCAGCGGATaGGCGCGTTCATCACTACAC +
Preference number: 4 (lower is better)
Translates to: CWYSNKSESLAPCRMPILSAGSG*ARSSLH
Trigger: GTGTAGTGATGAACGCGCTCATCCGCTGCCTGCAGA...CAAAATAGGCATCCTGCAAGGTGCCAGGCTCTCAGATTTATTGCTATACCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp GTTGAGCCCAGACAACACTGCACTGGGTTCAGGGCTTCATCTGAATTTGAAGAAATCTCCATCAGGTTCTaGCTGCTGAACTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VEPRQHCTGFRASSEFEEISIRF*LLNCCW
Trigger: CCAGCAGCAGTTCAGCAGTCAGAACCTGATGGAGAT...TTCTTCAAATTCAGATGAAGCCCTGAACCCAGTGCAGTGTTGTCTGGGCTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp GTTGAGCCCAGACAACACTGCACTGGGTTCAGGGCTTCATCTGAATTTGAAGAACTTTTCCTGGAAGCCTaGCAGAACCAGCTGGCCAAT +
Preference number: 4 (lower is better)
Translates to: VEPRQHCTGFRASSEFEELFLEA*QNQLAN
Trigger: ATTGGCCAGCTGGTTCTGTCAGGCTTCCAGGAAAAG...TTCTTCAAATTCAGATGAAGCCCTGAACCCAGTGCAGTGTTGTCTGGGCTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp TTGCCTTGCTGTGGCAGGTGTGACACCGATGAAGCAGTTCACTCGCATCAGGGCTCCATGGTTACTTTGTaGACCATCTTCTCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: LPCCGRCDTDEAVHSHQGSMVTL*TIFSSK
Trigger: TTTGGAAGAGAAGATGGTTCACAAAGTAACCATGGA...GCCCTGATGCGAGTGAACTGCTTCATCGGTGTCACACCTGCCACAGCAAGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp GGAGAGCAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTAGTGATCCTGGACCTTaGGCACCTCTGCAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: GEQWRYISEGEESWIPILSDPGP*APLQGH
Trigger: ATGACCCTGCAGAGGTGCTCAAGGTCCAGGATCACT...AAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061013.13
CDS-3UTR GCA 90 bp GTTGAGCCCAGACAACACTGCACTGGGTTCAGGGCTTCATCTGAATTTGAAGAATCCATCTCCCCTTCCTaGTGGATGATCTCCTGCATG +
Preference number: 4 (lower is better)
Translates to: VEPRQHCTGFRASSEFEESISPS*WMISCM
Trigger: CATGCAGGAGATCATCCAGCAGGAAGGGGAGATGGA...TTCTTCAAATTCAGATGAAGCCCTGAACCCAGTGCAGTGTTGTCTGGGCTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp ATGCATCTGCCTTTTTGCTTTAGGAACAAGGTCCCTGGGGACAGGCTGGGCAGTATCTGCCTCAAGACCTaGAGAAGGGATGGGAATAAA +
Preference number: 4 (lower is better)
Translates to: MHLPFCFRNKVPGDRLGSICLKT*RRDGNK
Trigger: TTTATTCCCATCCCTTCTGCAGGTCTTGAGGCAGAT...ACTGCCCAGCCTGTCCCCAGGGACCTTGTTCCTAAAGCAAAAAGGCAGATGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061013.13
CDS-3UTR GCA 90 bp GATGTAAGAGACGCTTCTCACCCATTGGTGCTCTCTGCTGGCAGTGACAAACATAGGGCTATGAAGCAGTaGACGATCTCCATCAGGTTC +
Preference number: 4 (lower is better)
Translates to: DVRDASHPLVLSAGSDKHRAMKQ*TISIRF
Trigger: GAACCTGATGGAGATCGTGCACTGCTTCATAGCCCT...ATGTTTGTCACTGCCAGCAGAGAGCACCAATGGGTGAGAAGCGTCTCTTACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp GAGAGCAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTCTCCTGGTGGTAGTGTaGCAGCAGGAGGATGCCTTC +
Preference number: 4 (lower is better)
Translates to: ESSGDIFQRERRVGYPFFLLVVV*QQEDAF
Trigger: GAAGGCATCCTCCTGCTGGCACACTACCACCAGGAG...AAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp CTCTCTGCTGGCAGTGACAAACATGGTGTGTCTTCCTTCACCTGTGGTGATTTTATCTTTGTCCTGCCCTaGACCCTTCTCCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: LSAGSDKHGVSSFTCGDFIFVLP*TLLQHQ
Trigger: CTGATGCTGGAGAAGGGTGCAGGGCAGGACAAAGAT...AAAATCACCACAGGTGAAGGAAGACACACCATGTTTGTCACTGCCAGCAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GTTTTTCTACAAATGAAAAGTGATTTGCCTTGCTGTGGCAGGTGTGACACCGATCCGCATGTCCAGGCCTaGCCCTGTGGTGTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: VFLQMKSDLPCCGRCDTDPHVQA*PCGVCL
Trigger: AAGACAGACACCACAGGGCCAGGCCTGGACATGCGG...ATCGGTGTCACACCTGCCACAGCAAGGCAAATCACTTTTCATTTGTAGAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp TCTCTCGTCTACCACAAGAGTTGGCCTTGGGTTTCTAAAACTAAGTTAAACCGTTTCACCTCAAGGTCCTaGTGGCGCAGCCACACGGTC +
Preference number: 4 (lower is better)
Translates to: SLVYHKSWPWVSKTKLNRFTSRS*WRSHTV
Trigger: GACCGTGTGGCTGCGCCACCAGGACCTTGAGGTGAA...ACGGTTTAACTTAGTTTTAGAAACCCAAGGCCAACTCTTGTGGTAGACGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp CATTGGTGCTCTCTGCTGGCAGTGACAAACATGGTGTGTCTTCCTTCACCTGTGTCGAAGGTCTCGATCTaGTTGTTCAGCTCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: HWCSLLAVTNMVCLPSPVSKVSI*LFSSLL
Trigger: CAGCAAAGAGCTGAACAACCAGATCGAGACCTTCGA...CACAGGTGAAGGAAGACACACCATGTTTGTCACTGCCAGCAGAGAGCACCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp TCTCTATTTACTCTATTGGAGCGGAAAGGTTGCAGAAATCACCGCTGTGAGAAGGGAGATGGAGGGCCATaGCTTTCTCCCGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: SLFTLLERKGCRNHRCEKGDGGP*LSPVPT
Trigger: AGTGGGAACGGGAGAAAGCCATGGCCCTCCATCTCC...CTTCTCACAGCGGTGATTTCTGCAACCTTTCCGCTCCAATAGAGTAAATAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACACGGCCCAGCAAGCCATaGAGCATGGTCCGTGCGAAG +
Preference number: 4 (lower is better)
Translates to: VEIYFRGRGELDTHSFTTRPSKP*SMVRAK
Trigger: CTTCGCACGGACCATGCTCCATGGCTTGCTGGGCCG...TGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GAGCCCTGGGCACAGATGTGTGTGCATATGTTACGTGACACATCCTGGGCTAGTGTCAGGAAACAGGTCTaGAAATTTGTCATCCTGGTC +
Preference number: 4 (lower is better)
Translates to: EPWAQMCVHMLRDTSWASVRKQV*KFVILV
Trigger: GACCAGGATGACAAATTTCCAGACCTGTTTCCTGAC...ACTAGCCCAGGATGTGTCACGTAACATATGCACACACATCTGTGCCCAGGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp CACACCACCCCATCTCATGTTATACAGATCACAAATAACCTCCCCTCTGTGATTCTCAGCAGCTTCTCCTaGTGCAGAACTGGGTCGCTC +
Preference number: 4 (lower is better)
Translates to: HTTPSHVIQITNNLPSVILSSFS*CRTGSL
Trigger: GAGCGACCCAGTTCTGCACCAGGAGAAGCTGCTGAG...AATCACAGAGGGGAGGTTATTTGTGATCTGTATAACATGAGATGGGGTGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp AGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACAAATGAAATGCCTGGGCCACGCTaGGGCAGGGGTCCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: RERRVGYPFFYNSFSTNEMPGPR*GRGPGS
Trigger: ACTGCCAGGACCCCTGCCCCAGCGTGGCCCAGGCAT...TTCATTTGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
ENSMUST00000135948.2
CDS-3UTR TCA 90 bp GTAAGAGACGCTTCTCACCCATTGGTGCTCTCTGCTGGCAGTGACAAACATGGTTGCCCATGTAGGGCATaGATTCAAACACATTGCCAT +
Preference number: 4 (lower is better)
Translates to: VRDASHPLVLSAGSDKHGCPCRA*IQTHCH
Trigger: ATGGCAATGTGTTTGAATTCATGCCCTACATGGGCA...ACCATGTTTGTCACTGCCAGCAGAGAGCACCAATGGGTGAGAAGCGTCTCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp GTAAGAGACGCTTCTCACCCATTGGTGCTCTCTGCTGGCAGTGACAAACATGGTTCATCTCCACCTGGCTaGAGAAGAACTTCATCAGTT +
Preference number: 4 (lower is better)
Translates to: VRDASHPLVLSAGSDKHGSSPPG*RRTSSV
Trigger: AACTGATGAAGTTCTTCTTCAGCCAGGTGGAGATGA...ACCATGTTTGTCACTGCCAGCAGAGAGCACCAATGGGTGAGAAGCGTCTCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp GGAGAGCAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTCAGACCCCAGCCTTTaGTCTTTTCCTGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: GEQWRYISEGEESWIPILSDPSL*SFPGSL
Trigger: CAGGCTTCCAGGAAAAGATCAAAGGCTGGGGTCTGA...AAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp GAGTGGTTACAAAAGCCCAGGCCTGACTTCACCCAATTCTCTAGTTTACTGTTTCACAGAGCTTCTGGATaGGAGAGACAACCTCGTCGC +
Preference number: 4 (lower is better)
Translates to: EWLQKPRPDFTQFSSLLFHRASG*ERQPRR
Trigger: GCGACGAGGTTGTCTCTCTCATCCAGAAGCTCTGTG...AAACAGTAAACTAGAGAATTGGGTGAAGTCAGGCCTGGGCTTTTGTAACCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp GAGAGCAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTGTCTCAGAAGTGATGTaGGGACGGTCTCCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: ESSGDIFQRERRVGYPFFVSEVM*GRSPGG
Trigger: ACCACCAGGAGACCGTCCTCACATCACTTCTGAGAC...AAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp TGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTGCTCCTCCAAGGCCTaGTCCAGGGGCTCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: WRYISEGEESWIPILLQQCSSKA*SRGSLL
Trigger: CAACAGAGAGCCCCTGGAGCAGGCCTTGGAGGAGCA...CTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp TGTTGGTATAGCAATAAATCTGAGAGCCTGGCACCTTGCAGGATGCCTATTTTGTCTCCATGTTCTGCATaGACAGCCTGGCCATCAGGC +
Preference number: 4 (lower is better)
Translates to: CWYSNKSESLAPCRMPILSPCSA*TAWPSG
Trigger: GCCTGATGGCCAGGCTGTGCATGCAGAACATGGAGA...CAAAATAGGCATCCTGCAAGGTGCCAGGCTCTCAGATTTATTGCTATACCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp GAGAGCAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTGTCTCATCTTTGTCCTaGCCTGCACCCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ESSGDIFQRERRVGYPFFVSSLS*PAPFSS
Trigger: GCTGGAGAAGGGTGCAGGGCAGGACAAAGATGAGAC...AAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GTAAGAGACGCTTCTCACCCATTGGTGCTCTCTGCTGGCAGTGACAAACATGGTAGGAGGTTGGTGACTTaGAAGAATGTACCATCATCC +
Preference number: 4 (lower is better)
Translates to: VRDASHPLVLSAGSDKHGRRLVT*KNVPSS
Trigger: GGATGATGGTACATTCTTCCAAGTCACCAACCTCCT...ACCATGTTTGTCACTGCCAGCAGAGAGCACCAATGGGTGAGAAGCGTCTCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp TGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTCACCTCAAGGTCCTaGTGGCGCAGCCACACGGTC +
Preference number: 4 (lower is better)
Translates to: WRYISEGEESWIPILLQQFTSRS*WRSHTV
Trigger: GACCGTGTGGCTGCGCCACCAGGACCTTGAGGTGAA...CTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp CACACCACCCCATCTCATGTTATACAGATCACAAATAACCTCCCCTCTGTGATTAACACTGTCTTTACCTaGCCCCGGGCACACAGTCCA +
Preference number: 4 (lower is better)
Translates to: HTTPSHVIQITNNLPSVINTVFT*PRAHSP
Trigger: TGGACTGTGTGCCCGGGGCCAGGTAAAGACAGTGTT...AATCACAGAGGGGAGGTTATTTGTGATCTGTATAACATGAGATGGGGTGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp TGTTGGTATAGCAATAAATCTGAGAGCCTGGCACCTTGCAGGATGCCTATTTTGAACACTGTCTTTACCTaGCCCCGGGCACACAGTCCA +
Preference number: 4 (lower is better)
Translates to: CWYSNKSESLAPCRMPILNTVFT*PRAHSP
Trigger: TGGACTGTGTGCCCGGGGCCAGGTAAAGACAGTGTT...CAAAATAGGCATCCTGCAAGGTGCCAGGCTCTCAGATTTATTGCTATACCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp ATGCATCTGCCTTTTTGCTTTAGGAACAAGGTCCCTGGGGACAGGCTGGGCAGTGCTTTAGGGAACTCATaGTATTTGCATACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: MHLPFCFRNKVPGDRLGSALGNS*YLHTGS
Trigger: AGACCCTGTATGCAAATACCATGAGTTCCCTAAAGC...ACTGCCCAGCCTGTCCCCAGGGACCTTGTTCCTAAAGCAAAAAGGCAGATGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GGAGAGCAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTGCAGCTCCTGCTCCTTaGAAGTTCCCCATAAAGAGC +
Preference number: 4 (lower is better)
Translates to: GEQWRYISEGEESWIPILAAPAP*KFPIKS
Trigger: GCTCTTTATGGGGAACTTCCAAGGAGCAGGAGCTGC...AAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp CTGATAACTTCTCTGCTTTTAACTCAAAGAATATTGGCTACTCTGCAGGTTTGCGCAGCTTCTGGCCCATaGCTGCTGCCAAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LITSLLLTQRILATLQVCAASGP*LLPSCS
Trigger: GCTGCAGCTTGGCAGCAGCCATGGGCCAGAAGCTGC...GCAAACCTGCAGAGTAGCCAATATTCTTTGAGTTAAAAGCAGAGAAGTTATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp TCTCTCGTCTACCACAAGAGTTGGCCTTGGGTTTCTAAAACTAAGTTAAACCGTTCTGCATGCACAGCCTaGCCATCAGGCTCACTCCCT +
Preference number: 4 (lower is better)
Translates to: SLVYHKSWPWVSKTKLNRSACTA*PSGSLP
Trigger: AGGGAGTGAGCCTGATGGCCAGGCTGTGCATGCAGA...ACGGTTTAACTTAGTTTTAGAAACCCAAGGCCAACTCTTGTGGTAGACGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp TGTTGGTATAGCAATAAATCTGAGAGCCTGGCACCTTGCAGGATGCCTATTTTGCACACTGAAACATGGTaGCCACACATGCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: CWYSNKSESLAPCRMPILHTETW*PHMPGP
Trigger: TGGCCCAGGCATGTGTGGCCACCATGTTTCAGTGTG...CAAAATAGGCATCCTGCAAGGTGCCAGGCTCTCAGATTTATTGCTATACCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR CAA 72 bp TCAGGGCACTCACTGTTCTATTCACCTCTGTTAGAATaGGGTTTCCTCTTGAGTCCACACCACCCCATCTCA +
Preference number: 4 (lower is better)
Translates to: SGHSLFYSPLLE*GFLLSPHHPIS
Trigger: TGAGATGGGGTGGTGTGGACTCAAGAGGAAACCCAATTCTAACAGAGGTGAATAGAACAGTGAGTGCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp TTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACATCAGGTTCTGACTGCTaGACTGCTGCTGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: FQRERRVGYPFFYNSFSTSGSDC*TAAGLG
Trigger: CCCCAGCCCAGCAGCAGTTCAGCAGTCAGAACCTGA...TGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp TGTTGGTATAGCAATAAATCTGAGAGCCTGGCACCTTGCAGGATGCCTATTTTGTCAGACCCCAGCCTTTaGTCTTTTCCTGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: CWYSNKSESLAPCRMPILSDPSL*SFPGSL
Trigger: CAGGCTTCCAGGAAAAGATCAAAGGCTGGGGTCTGA...CAAAATAGGCATCCTGCAAGGTGCCAGGCTCTCAGATTTATTGCTATACCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp GATGTAAGAGACGCTTCTCACCCATTGGTGCTCTCTGCTGGCAGTGACAAACATCTGTCATCTGTTCATTaGTGCTGTCGTTACTGTGAC +
Preference number: 4 (lower is better)
Translates to: DVRDASHPLVLSAGSDKHLSSVH*CCRYCD
Trigger: GTCACAGTAACGACAGCATCAATGAACAGATGACAG...ATGTTTGTCACTGCCAGCAGAGAGCACCAATGGGTGAGAAGCGTCTCTTACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp CTCTCTGCTGGCAGTGACAAACATGGTGTGTCTTCCTTCACCTGTGGTGATTTTTCCTCCTTACATTTCTaGAGCTCCTGCTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: LSAGSDKHGVSSFTCGDFSSLHF*SSCSLE
Trigger: TTCCAAGGAGCAGGAGCTGCAGAAATGTAAGGAGGA...AAAATCACCACAGGTGAAGGAAGACACACCATGTTTGTCACTGCCAGCAGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp TCTCTCGTCTACCACAAGAGTTGGCCTTGGGTTTCTAAAACTAAGTTAAACCGTATGGAGCATGGTCCGTaGGAAGGGGACATTCTCAGC +
Preference number: 4 (lower is better)
Translates to: SLVYHKSWPWVSKTKLNRMEHGP*EGDILS
Trigger: GCTGAGAATGTCCCCTTCGCACGGACCATGCTCCAT...ACGGTTTAACTTAGTTTTAGAAACCCAAGGCCAACTCTTGTGGTAGACGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp ATGCATCTGCCTTTTTGCTTTAGGAACAAGGTCCCTGGGGACAGGCTGGGCAGTAAGAAAGCTCTGCACTaGTTAGAGATGGCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: MHLPFCFRNKVPGDRLGSKKALH*LEMASK
Trigger: TTTTGAAGCCATCTCTAAGCAGTGCAGAGCTTTCTT...ACTGCCCAGCCTGTCCCCAGGGACCTTGTTCCTAAAGCAAAAAGGCAGATGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp GAGAGCAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTGGTCCTGGAGAGAATTaGGAAGTCCCACAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: ESSGDIFQRERRVGYPFFGPGEN*EVPQGP
Trigger: TGGACCTTGTGGGACTTCGCAATTCTCTCCAGGACC...AAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
ENSMUST00000135948.2
CDS-3UTR GCA 90 bp CACACCACCCCATCTCATGTTATACAGATCACAAATAACCTCCCCTCTGTGATTTTGATAGTGATCCTCTaGAGGGTCATCTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: HTTPSHVIQITNNLPSVILIVIL*RVISWG
Trigger: GCCCCAGGAGATGACCCTGCAGAGGATCACTATCAA...AATCACAGAGGGGAGGTTATTTGTGATCTGTATAACATGAGATGGGGTGGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GGAGAGCAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTATGACCAAGCTGAAGTaGTTTCGGGACAGAGCCACT +
Preference number: 4 (lower is better)
Translates to: GEQWRYISEGEESWIPILMTKLK*FRDRAT
Trigger: AGTGGCTCTGTCCCGAAACCACTTCAGCTTGGTCAT...AAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GAGTGGTTACAAAAGCCCAGGCCTGACTTCACCCAATTCTCTAGTTTACTGTTTTCACCTGGCGCATCTTaGCTTCGTTGGCAAGTCTCA +
Preference number: 4 (lower is better)
Translates to: EWLQKPRPDFTQFSSLLFSPGAS*LRWQVS
Trigger: TGAGACTTGCCAACGAAGCCAAGATGCGCCAGGTGA...AAACAGTAAACTAGAGAATTGGGTGAAGTCAGGCCTGGGCTTTTGTAACCACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GAGAGCAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTGCACTACAGATCACCTaGCGCATCTTGGCTTCGTTG +
Preference number: 4 (lower is better)
Translates to: ESSGDIFQRERRVGYPFFALQIT*RILASL
Trigger: CAACGAAGCCAAGATGCGCCAGGTGATCTGTAGTGC...AAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp TCTCTATTTACTCTATTGGAGCGGAAAGGTTGCAGAAATCACCGCTGTGAGAAGCACAGAACGTCTCCATaGCACTACAGATCACCTGGC +
Preference number: 4 (lower is better)
Translates to: SLFTLLERKGCRNHRCEKHRTSP*HYRSPG
Trigger: GCCAGGTGATCTGTAGTGCCATGGAGACGTTCTGTG...CTTCTCACAGCGGTGATTTCTGCAACCTTTCCGCTCCAATAGAGTAAATAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp AGCCCAGGCCTGACTTCACCCAATTCTCTAGTTTACTGTTTGTCTGCTTGGGCGGAAGTATCGGTACATTaGGAAGAGCTTCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: SPGLTSPNSLVYCLSAWAEVSVH*EELHSK
Trigger: TTTGCTGTGAAGCTCTTCCCAATGTACCGATACTTC...CGCCCAAGCAGACAAACAGTAAACTAGAGAATTGGGTGAAGTCAGGCCTGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACAAATGAAACGGGCCAGCAGCTTCTaGGGTGCAGGCAAGTCCACA +
Preference number: 4 (lower is better)
Translates to: GRGELDTHSFTTVFLQMKRASSF*GAGKST
Trigger: TGTGGACTTGCCTGCACCCCAGAAGCTGCTGGCCCG...TTTCATTTGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp TATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCCGGGCCAGCAGCTTCTaGGGTGCAGGCAAGTCCACA +
Preference number: 4 (lower is better)
Translates to: YISEGEESWIPILLQQFFRASSF*GAGKST
Trigger: TGTGGACTTGCCTGCACCCCAGAAGCTGCTGGCCCG...GAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp TCTCTATTTACTCTATTGGAGCGGAAAGGTTGCAGAAATCACCGCTGTGAGAAGGACTGTTCCGACTCCTaGATCCTCTCCTCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: SLFTLLERKGCRNHRCEKDCSDS*ILSSKS
Trigger: GGACTTTGAGGAGAGGATCCAGGAGTCGGAACAGTC...CTTCTCACAGCGGTGATTTCTGCAACCTTTCCGCTCCAATAGAGTAAATAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GATGTAAGAGACGCTTCTCACCCATTGGTGCTCTCTGCTGGCAGTGACAAACATAACCAAGTGGTCAGGTaGTTCTGCTTTGATGATCAC +
Preference number: 4 (lower is better)
Translates to: DVRDASHPLVLSAGSDKHNQVVR*FCFDDH
Trigger: GTGATCATCAAAGCAGAACCACCTGACCACTTGGTT...ATGTTTGTCACTGCCAGCAGAGAGCACCAATGGGTGAGAAGCGTCTCTTACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp TGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGGGAGATGGAGGGCCATaGCTTTCTCCCGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: WRYISEGEESWIPILLQQGDGGP*LSPVPT
Trigger: AGTGGGAACGGGAGAAAGCCATGGCCCTCCATCTCC...CTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp CTCTCTGCTGGCAGTGACAAACATGGTGTGTCTTCCTTCACCTGTGGTGATTTTTTCATGTCGGTGTCCTaGAGGTCCTCCTTACATTTC +
Preference number: 4 (lower is better)
Translates to: LSAGSDKHGVSSFTCGDFFMSVS*RSSLHF
Trigger: GAAATGTAAGGAGGACCTCCAGGACACCGACATGAA...AAAATCACCACAGGTGAAGGAAGACACACCATGTTTGTCACTGCCAGCAGAGAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GGAGAGCAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTGCCAGATGTCAGCCTTaGAGGTGGCATTTATCTTGG +
Preference number: 4 (lower is better)
Translates to: GEQWRYISEGEESWIPILARCQP*RWHLSW
Trigger: CCAAGATAAATGCCACCTCCAAGGCTGACATCTGGC...AAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GTCTACCACAAGAGTTGGCCTTGGGTTTCTAAAACTAAGTTAAACCGTTATATAAGGGGAGGCAGCTTCTaGCCCATGGCTGCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: VYHKSWPWVSKTKLNRYIRGGSF*PMAAAK
Trigger: CTTGGCAGCAGCCATGGGCCAGAAGCTGCCTCCCCT...TATATAACGGTTTAACTTAGTTTTAGAAACCCAAGGCCAACTCTTGTGGTAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp AGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACAAATGAAAGGGGAGGCAGCTTCTaGCCCATGGCTGCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: RERRVGYPFFYNSFSTNERGGSF*PMAAAK
Trigger: CTTGGCAGCAGCCATGGGCCAGAAGCTGCCTCCCCT...TTCATTTGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp GTTGAGCCCAGACAACACTGCACTGGGTTCAGGGCTTCATCTGAATTTGAAGAATCATCTCCACCTGGCTaGAGAAGAACTTCATCAGTT +
Preference number: 4 (lower is better)
Translates to: VEPRQHCTGFRASSEFEESSPPG*RRTSSV
Trigger: AACTGATGAAGTTCTTCTTCAGCCAGGTGGAGATGA...TTCTTCAAATTCAGATGAAGCCCTGAACCCAGTGCAGTGTTGTCTGGGCTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp CTGATAACTTCTCTGCTTTTAACTCAAAGAATATTGGCTACTCTGCAGGTTTGCAGATGGCCGTGCTGCTaGTGCAGCAGCTCAGGATCT +
Preference number: 4 (lower is better)
Translates to: LITSLLLTQRILATLQVCRWPCC*CSSSGS
Trigger: AGATCCTGAGCTGCTGCATCAGCAGCACGGCCATCT...GCAAACCTGCAGAGTAGCCAATATTCTTTGAGTTAAAAGCAGAGAAGTTATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp CACACCACCCCATCTCATGTTATACAGATCACAAATAACCTCCCCTCTGTGATTCAGCCTCCGTGTCTTTaGCATGAATTTGGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: HTTPSHVIQITNNLPSVIQPPCL*HEFGSR
Trigger: CCGAGAACCAAATTCATGGCAAAGACACGGAGGCTG...AATCACAGAGGGGAGGTTATTTGTGATCTGTATAACATGAGATGGGGTGGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp GAGAGCAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTCATTTCTGCAGCTCCTaGTCCTTGGAAGTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: ESSGDIFQRERRVGYPFFHFCSS*SLEVPH
Trigger: ATGGGGAACTTCCAAGGAGCAGGAGCTGCAGAAATG...AAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp GTCTACCACAAGAGTTGGCCTTGGGTTTCTAAAACTAAGTTAAACCGTTATATACTTCTGGCCCATGGCTaGTGCCAAGCTGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: VYHKSWPWVSKTKLNRYILLAHG*CQAAAG
Trigger: TCCTGCTGCAGCTTGGCAGCAGCCATGGGCCAGAAG...TATATAACGGTTTAACTTAGTTTTAGAAACCCAAGGCCAACTCTTGTGGTAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GAGAGCAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTTGGGTAGAAATCTCTaGCATCTGCAGGCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: ESSGDIFQRERRVGYPFFLGRNL*HLQAAD
Trigger: ATCCGCTGCCTGCAGATGCCAGAGATTTCTACCCAA...AAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp TTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACATATCCCGCATCTGCTTaGAGGCAATGGCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: FQRERRVGYPFFYNSFSTYPASA*RQWPPA
Trigger: GGCTGGTGGCCATTGCCTCCAAGCAGATGCGGGATA...TGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp AGAGCAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTTCCTTGACCCGCATCTaGAGGAAGATGCCTATCCAG +
Preference number: 4 (lower is better)
Translates to: RAVEIYFRGRGELDTHSFSLTRI*RKMPIQ
Trigger: CTGGATAGGCATCTTCCTCCAGATGCGGGTCAAGGA...AAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp TGTTGGTATAGCAATAAATCTGAGAGCCTGGCACCTTGCAGGATGCCTATTTTGTCAGATGGCTTTCCATaGGCAGTGGCTGTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: CWYSNKSESLAPCRMPILSDGFP*AVAVSE
Trigger: TTCTGAGACAGCCACTGCCCATGGAAAGCCATCTGA...CAAAATAGGCATCCTGCAAGGTGCCAGGCTCTCAGATTTATTGCTATACCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp CACACCACCCCATCTCATGTTATACAGATCACAAATAACCTCCCCTCTGTGATTCAGAAATGCACACACTaGAACATGGTGGCCACACAT +
Preference number: 4 (lower is better)
Translates to: HTTPSHVIQITNNLPSVIQKCTH*NMVATH
Trigger: ATGTGTGGCCACCATGTTTCAGTGTGTGCATTTCTG...AATCACAGAGGGGAGGTTATTTGTGATCTGTATAACATGAGATGGGGTGGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp GAGTGGTTACAAAAGCCCAGGCCTGACTTCACCCAATTCTCTAGTTTACTGTTTGATGCTTCTAGAATCTaGCTCAAGACCTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: EWLQKPRPDFTQFSSLLFDASRI*LKTCRR
Trigger: CCTTCTGCAGGTCTTGAGGCAGATTCTAGAAGCATC...AAACAGTAAACTAGAGAATTGGGTGAAGTCAGGCCTGGGCTTTTGTAACCACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061013.13
CDS-3UTR GCA 90 bp TGTTGGTATAGCAATAAATCTGAGAGCCTGGCACCTTGCAGGATGCCTATTTTGAATTTTGGGGTCATCTaGGCTCACTACTGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: CWYSNKSESLAPCRMPILNFGVI*AHYCPD
Trigger: ATCAGGGCAGTAGTGAGCGCAGATGACCCCAAAATT...CAAAATAGGCATCCTGCAAGGTGCCAGGCTCTCAGATTTATTGCTATACCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp AGAGCAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTCATTTCTGCAGCTCCTaGTCCTTGGAAGTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: RAVEIYFRGRGELDTHSFHFCSS*SLEVPH
Trigger: ATGGGGAACTTCCAAGGAGCAGGAGCTGCAGAAATG...AAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp CTGATAACTTCTCTGCTTTTAACTCAAAGAATATTGGCTACTCTGCAGGTTTGCATGGAGCATGGTCCGTaGGAAGGGGACATTCTCAGC +
Preference number: 4 (lower is better)
Translates to: LITSLLLTQRILATLQVCMEHGP*EGDILS
Trigger: GCTGAGAATGTCCCCTTCGCACGGACCATGCTCCAT...GCAAACCTGCAGAGTAGCCAATATTCTTTGAGTTAAAAGCAGAGAAGTTATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp TGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGATCTTTGTCCTGCCCTaGACCCTTCTCCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: WRYISEGEESWIPILLQQIFVLP*TLLQHQ
Trigger: CTGATGCTGGAGAAGGGTGCAGGGCAGGACAAAGAT...CTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GGAGAGCAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTGCTCATCTCCACCTaGCTGAAGAAGAACTTCATC +
Preference number: 4 (lower is better)
Translates to: GEQWRYISEGEESWIPILLLIST*LKKNFI
Trigger: GATGAAGTTCTTCTTCAGCCAGGTGGAGATGAGCAA...AAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp CAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAAGACTGTTCCGACTCCTaGATCCTCTCCTCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: QWRYISEGEESWIPILLQDCSDS*ILSSKS
Trigger: GGACTTTGAGGAGAGGATCCAGGAGTCGGAACAGTC...TTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GAGAGCAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTAAGTCCTCTGGGTCTTaGATGCTTTTGATGGCGTTG +
Preference number: 4 (lower is better)
Translates to: ESSGDIFQRERRVGYPFFKSSGS*MLLMAL
Trigger: CAACGCCATCAAAAGCATCCAAGACCCAGAGGACTT...AAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp TCTCTATTTACTCTATTGGAGCGGAAAGGTTGCAGAAATCACCGCTGTGAGAAGCTCTGGAGGAAGCACTaGAAATCTTGTTCATGTCGG +
Preference number: 4 (lower is better)
Translates to: SLFTLLERKGCRNHRCEKLWRKH*KSCSCR
Trigger: CCGACATGAACAAGATTTCCAGTGCTTCCTCCAGAG...CTTCTCACAGCGGTGATTTCTGCAACCTTTCCGCTCCAATAGAGTAAATAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp TCTCTCGTCTACCACAAGAGTTGGCCTTGGGTTTCTAAAACTAAGTTAAACCGTTCAGATGGCTTTCCATaGGCAGTGGCTGTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: SLVYHKSWPWVSKTKLNRSDGFP*AVAVSE
Trigger: TTCTGAGACAGCCACTGCCCATGGAAAGCCATCTGA...ACGGTTTAACTTAGTTTTAGAAACCCAAGGCCAACTCTTGTGGTAGACGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp GTTTTTCTACAAATGAAAAGTGATTTGCCTTGCTGTGGCAGGTGTGACACCGATCTCTGTGATTATCACTaGAGCCAAGGTCTTCCGCAT +
Preference number: 4 (lower is better)
Translates to: VFLQMKSDLPCCGRCDTDLCDYH*SQGLPH
Trigger: ATGCGGAAGACCTTGGCTTCAGTGATAATCACAGAG...ATCGGTGTCACACCTGCCACAGCAAGGCAAATCACTTTTCATTTGTAGAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp TGTTGGTATAGCAATAAATCTGAGAGCCTGGCACCTTGCAGGATGCCTATTTTGTTGAGAGGCTTGAGATaGTGCTGCAGTTCATACATG +
Preference number: 4 (lower is better)
Translates to: CWYSNKSESLAPCRMPILLRGLR*CCSSYM
Trigger: CATGTATGAACTGCAGCATCATCTCAAGCCTCTCAA...CAAAATAGGCATCCTGCAAGGTGCCAGGCTCTCAGATTTATTGCTATACCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp TTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACAGGACGTGCAACTCTGTaGAAATGGGGTGTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: FQRERRVGYPFFYNSFSTGRATL*KWGVAA
Trigger: TGCTGCTACACCCCATTTTCACAGAGTTGCACGTCC...TGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp GTTGAGCCCAGACAACACTGCACTGGGTTCAGGGCTTCATCTGAATTTGAAGAATCCATGGTTACTTTGTaGACCATCTTCTCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: VEPRQHCTGFRASSEFEESMVTL*TIFSSK
Trigger: TTTGGAAGAGAAGATGGTTCACAAAGTAACCATGGA...TTCTTCAAATTCAGATGAAGCCCTGAACCCAGTGCAGTGTTGTCTGGGCTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp GGTGTTATGCAGAGTTACATTTTACAATGGTTAGAGAGCTTAGACCTTTTACACGGAGGATGCCTTCAATaGGATGTCGCCTCACCTCTG +
Preference number: 4 (lower is better)
Translates to: GVMQSYILQWLESLDLLHGGCLQ*DVASPL
Trigger: CAGAGGTGAGGCGACATCTCATTGAAGGCATCCTCC...GTGTAAAAGGTCTAAGCTCTCTAACCATTGTAAAATGTAACTCTGCATAACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp AGAGCAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTGCAAGTCCACATGCTTaGTCTTTCCAGCTATTCCAG +
Preference number: 4 (lower is better)
Translates to: RAVEIYFRGRGELDTHSFASPHA*SFQLFQ
Trigger: CTGGAATAGCTGGAAAGAGCAAGCATGTGGACTTGC...AAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp TCTCTCGTCTACCACAAGAGTTGGCCTTGGGTTTCTAAAACTAAGTTAAACCGTGCAGGCAAGTCCACATaGTTGCTCTTTCCAGCTATT +
Preference number: 4 (lower is better)
Translates to: SLVYHKSWPWVSKTKLNRAGKST*LLFPAI
Trigger: AATAGCTGGAAAGAGCAAGCATGTGGACTTGCCTGC...ACGGTTTAACTTAGTTTTAGAAACCCAAGGCCAACTCTTGTGGTAGACGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp TCTCTCGTCTACCACAAGAGTTGGCCTTGGGTTTCTAAAACTAAGTTAAACCGTTCCTCCTTACATTTCTaGAGCTCCTGCTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: SLVYHKSWPWVSKTKLNRSSLHF*SSCSLE
Trigger: TTCCAAGGAGCAGGAGCTGCAGAAATGTAAGGAGGA...ACGGTTTAACTTAGTTTTAGAAACCCAAGGCCAACTCTTGTGGTAGACGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp GGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACAAATGAAATCTCCATGTTCTGCATaGACAGCCTGGCCATCAGGC +
Preference number: 4 (lower is better)
Translates to: GRGELDTHSFTTVFLQMKSPCSA*TAWPSG
Trigger: GCCTGATGGCCAGGCTGTGCATGCAGAACATGGAGA...TTTCATTTGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp TATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCAGCAGCTTCTCCTGGTaGAGAACTGGGTCGCTCATG +
Preference number: 4 (lower is better)
Translates to: YISEGEESWIPILLQQFFSSFSW*RTGSLM
Trigger: CATGAGCGACCCAGTTCTGCACCAGGAGAAGCTGCT...GAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp ATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACGGTCCTGGAGAGAATTaGGAAGTCCCACAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: ISEGEESWIPILLQQFFYGPGEN*EVPQGP
Trigger: TGGACCTTGTGGGACTTCGCAATTCTCTCCAGGACC...GTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
ENSMUST00000135948.2
CDS-3UTR GCA 90 bp TTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACAGCGTCTGAGTCTAGCTaGAGGTCCTGGAGAGAATTG +
Preference number: 4 (lower is better)
Translates to: FQRERRVGYPFFYNSFSTASESS*RSWREL
Trigger: CAATTCTCTCCAGGACCTGCAGCTAGACTCAGACGC...TGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
ENSMUST00000135948.2
CDS-3UTR CCA 90 bp AGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACAAATGAACCAGGCCTGGCCCTGTaGTGTCTGTCTTTGCTGATT +
Preference number: 4 (lower is better)
Translates to: RERRVGYPFFYNSFSTNEPGLAL*CLSLLI
Trigger: AATCAGCAAAGACAGACACCACAGGGCCAGGCCTGG...TTCATTTGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp CAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAATCTGCTTGGAGGCAATaGCCACCAGCCTTTGTATAC +
Preference number: 4 (lower is better)
Translates to: QWRYISEGEESWIPILLQSAWRQ*PPAFVY
Trigger: GTATACAAAGGCTGGTGGCCATTGCCTCCAAGCAGA...TTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp TATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACCCACATGTCAGCCATaGAAGGAGCAATGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: YFRGRGELDTHSFTTVFLPTCQP*KEQCSG
Trigger: GCCAGAGCATTGCTCCTTCCATGGCTGACATGTGGG...TAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GGTGTTATGCAGAGTTACATTTTACAATGGTTAGAGAGCTTAGACCTTTTACACCCCACATGTCAGCCATaGAAGGAGCAATGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: GVMQSYILQWLESLDLLHPTCQP*KEQCSG
Trigger: GCCAGAGCATTGCTCCTTCCATGGCTGACATGTGGG...GTGTAAAAGGTCTAAGCTCTCTAACCATTGTAAAATGTAACTCTGCATAACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACAAATGAAATCTTCCCCTGGGGGTTaGAGGGAGATAACGGTGTGT +
Preference number: 4 (lower is better)
Translates to: GRGELDTHSFTTVFLQMKSSPGG*REITVC
Trigger: ACACACCGTTATCTCCCTCCAACCCCCAGGGGAAGA...TTTCATTTGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp AGAGCAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTCTCTGGAGGAAGCACTaGAAATCTTGTTCATGTCGG +
Preference number: 4 (lower is better)
Translates to: RAVEIYFRGRGELDTHSFLWRKH*KSCSCR
Trigger: CCGACATGAACAAGATTTCCAGTGCTTCCTCCAGAG...AAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp ATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACCCACCTTGGCGACTCTaGAGGAAGCACTGGAAATCT +
Preference number: 4 (lower is better)
Translates to: ISEGEESWIPILLQQFFYPPWRL*RKHWKS
Trigger: AGATTTCCAGTGCTTCCTCCAGAGTCGCCAAGGTGG...GTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACAAATGAAACACACTGAAACATGGTaGCCACACATGCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: GRGELDTHSFTTVFLQMKHTETW*PHMPGP
Trigger: TGGCCCAGGCATGTGTGGCCACCATGTTTCAGTGTG...TTTCATTTGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
ENSMUST00000135948.2
CDS-3UTR TCA 90 bp GTTTTTCTACAAATGAAAAGTGATTTGCCTTGCTGTGGCAGGTGTGACACCGATTGCCCATGTAGGGCATaGATTCAAACACATTGCCAT +
Preference number: 4 (lower is better)
Translates to: VFLQMKSDLPCCGRCDTDCPCRA*IQTHCH
Trigger: ATGGCAATGTGTTTGAATTCATGCCCTACATGGGCA...ATCGGTGTCACACCTGCCACAGCAAGGCAAATCACTTTTCATTTGTAGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp GGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACAAATGAAAATCTCCATCAGGTTCTaGCTGCTGAACTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GRGELDTHSFTTVFLQMKISIRF*LLNCCW
Trigger: CCAGCAGCAGTTCAGCAGTCAGAACCTGATGGAGAT...TTTCATTTGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp CTGATAACTTCTCTGCTTTTAACTCAAAGAATATTGGCTACTCTGCAGGTTTGCTGTAGTCTGTCTCCATaGTGTAGCACAGGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: LITSLLLTQRILATLQVCCSLSP*CSTGAS
Trigger: TGAGGCTCCTGTGCTACATCATGGAGACAGACTACA...GCAAACCTGCAGAGTAGCCAATATTCTTTGAGTTAAAAGCAGAGAAGTTATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp GTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACACTCTCCTCAAAGTCCTaGAGCACATTCAACACTGTC +
Preference number: 4 (lower is better)
Translates to: VEIYFRGRGELDTHSFTTLSSKS*STFNTV
Trigger: GACAGTGTTGAATGTGCTTCAGGACTTTGAGGAGAG...TGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp TGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTCCCACTCTTTCTCTaGCAAGATCCACTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: WRYISEGEESWIPILLQQFPLFL*QDPLLQ
Trigger: CTGGAGAAGTGGATCTTGTCAGAGAAAGAGTGGGAA...CTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp GGTGTTATGCAGAGTTACATTTTACAATGGTTAGAGAGCTTAGACCTTTTACACGAACGTAGATCTGCATaGGATGGAGATGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: GVMQSYILQWLESLDLLHERRSA*DGDGGP
Trigger: TGGCCCTCCATCTCCATCTCATGCAGATCTACGTTC...GTGTAAAAGGTCTAAGCTCTCTAACCATTGTAAAATGTAACTCTGCATAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp CAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAAAAGTGCCAGATGCTCTaGTTCCTCCAACATGTCTTC +
Preference number: 4 (lower is better)
Translates to: QWRYISEGEESWIPILLQKCQML*FLQHVF
Trigger: GAAGACATGTTGGAGGAAGCAGAGCATCTGGCACTT...TTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp GTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAAAGTGCCAGATGCTCTaGTTCCTCCAACATGTCTTC +
Preference number: 4 (lower is better)
Translates to: VEIYFRGRGELDTHSFTTKCQML*FLQHVF
Trigger: GAAGACATGTTGGAGGAAGCAGAGCATCTGGCACTT...TGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp CAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAAAATTTTGGGGTCATCTaGGCTCACTACTGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: QWRYISEGEESWIPILLQNFGVI*AHYCPD
Trigger: ATCAGGGCAGTAGTGAGCGCAGATGACCCCAAAATT...TTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp TTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACACAGCCTCCGTGTCTTTaGCATGAATTTGGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: FQRERRVGYPFFYNSFSTQPPCL*HEFGSR
Trigger: CCGAGAACCAAATTCATGGCAAAGACACGGAGGCTG...TGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GTTTTTCTACAAATGAAAAGTGATTTGCCTTGCTGTGGCAGGTGTGACACCGATGTAAGAGCAGATTTGTaGGCAAACTGGAAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: VFLQMKSDLPCCGRCDTDVRADL*ANWKSS
Trigger: AGAGGACTTCCAGTTTGCCCACAAATCTGCTCTTAC...ATCGGTGTCACACCTGCCACAGCAAGGCAAATCACTTTTCATTTGTAGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp TATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCGCAGCTCCTGCTCCTTaGAAGTTCCCCATAAAGAGC +
Preference number: 4 (lower is better)
Translates to: YISEGEESWIPILLQQFFAAPAP*KFPIKS
Trigger: GCTCTTTATGGGGAACTTCCAAGGAGCAGGAGCTGC...GAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp CAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAATTCATGTCGGTGTCCTaGAGGTCCTCCTTACATTTC +
Preference number: 4 (lower is better)
Translates to: QWRYISEGEESWIPILLQFMSVS*RSSLHF
Trigger: GAAATGTAAGGAGGACCTCCAGGACACCGACATGAA...TTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp TCTCTATTTACTCTATTGGAGCGGAAAGGTTGCAGAAATCACCGCTGTGAGAAGGGAAATTTGTCATCCTaGTCCATCTTTTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: SLFTLLERKGCRNHRCEKGNLSS*SIFSMR
Trigger: CCTCATGGAAAAGATGGACCAGGATGACAAATTTCC...CTTCTCACAGCGGTGATTTCTGCAACCTTTCCGCTCCAATAGAGTAAATAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp CACACCACCCCATCTCATGTTATACAGATCACAAATAACCTCCCCTCTGTGATTGGAAATTTGTCATCCTaGTCCATCTTTTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: HTTPSHVIQITNNLPSVIGNLSS*SIFSMR
Trigger: CCTCATGGAAAAGATGGACCAGGATGACAAATTTCC...AATCACAGAGGGGAGGTTATTTGTGATCTGTATAACATGAGATGGGGTGGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
3UTR CAA 72 bp CTGTTCTATTCACCTCTGTTAGAATTGGGTTTCCTCTaGAGTCCACACCACCCCATCTCATGTTATACAGAT +
Preference number: 4 (lower is better)
Translates to: LFYSPLLELGFL*SPHHPISCYTD
Trigger: ATCTGTATAACATGAGATGGGGTGGTGTGGACTCAAGAGGAAACCCAATTCTAACAGAGGTGAATAGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp GTTTTTCTACAAATGAAAAGTGATTTGCCTTGCTGTGGCAGGTGTGACACCGATGAGTTTCTCAGAAACTaGATCAGCATATCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: VFLQMKSDLPCCGRCDTDEFLRN*ISISSQ
Trigger: CTGGGAAGATATGCTGATTCAGTTTCTGAGAAACTC...ATCGGTGTCACACCTGCCACAGCAAGGCAAATCACTTTTCATTTGTAGAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp TTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACACTCTCCTCAAAGTCCTaGAGCACATTCAACACTGTC +
Preference number: 4 (lower is better)
Translates to: FQRERRVGYPFFYNSFSTLSSKS*STFNTV
Trigger: GACAGTGTTGAATGTGCTTCAGGACTTTGAGGAGAG...TGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp GTTTTTCTACAAATGAAAAGTGATTTGCCTTGCTGTGGCAGGTGTGACACCGATTCTTCACCTCCCCTTTaGAGAAATGCTTCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: VFLQMKSDLPCCGRCDTDSSPPL*RNASWK
Trigger: TTTCCAAGAAGCATTTCTTCAAAGGGGAGGTGAAGA...ATCGGTGTCACACCTGCCACAGCAAGGCAAATCACTTTTCATTTGTAGAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
ENSMUST00000135948.2
CDS-3UTR TCA 90 bp GTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACACTGTCATCTGTTCATTaGTGCTGTCGTTACTGTGAC +
Preference number: 4 (lower is better)
Translates to: VEIYFRGRGELDTHSFTTLSSVH*CCRYCD
Trigger: GTCACAGTAACGACAGCATCAATGAACAGATGACAG...TGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
ENSMUST00000135948.2
CDS-3UTR TCA 90 bp CACACCACCCCATCTCATGTTATACAGATCACAAATAACCTCCCCTCTGTGATTGAGCACATGTTTGTCTaGAAAACTGTCATCTGTTCA +
Preference number: 4 (lower is better)
Translates to: HTTPSHVIQITNNLPSVIEHMFV*KTVICS
Trigger: TGAACAGATGACAGTTTTTCAGACAAACATGTGCTC...AATCACAGAGGGGAGGTTATTTGTGATCTGTATAACATGAGATGGGGTGGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp AGAGCAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTTGCAGGCAGCAATTCTaGTCCTTGACAGATTGTTTT +
Preference number: 4 (lower is better)
Translates to: RAVEIYFRGRGELDTHSFCRQQF*SLTDCF
Trigger: AAAACAATCTGTCAAGGATCAGAATTGCTGCCTGCA...AAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
ENSMUST00000135948.2
CDS-3UTR GCA 90 bp TATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCAGGGCTATGAAGCAGTaGACGATCTCCATCAGGTTC +
Preference number: 4 (lower is better)
Translates to: YISEGEESWIPILLQQFFRAMKQ*TISIRF
Trigger: GAACCTGATGGAGATCGTGCACTGCTTCATAGCCCT...GAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp TTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACAGCAGGCAAGTCCACATaGTTGCTCTTTCCAGCTATT +
Preference number: 4 (lower is better)
Translates to: FQRERRVGYPFFYNSFSTAGKST*LLFPAI
Trigger: AATAGCTGGAAAGAGCAAGCATGTGGACTTGCCTGC...TGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp CTGATAACTTCTCTGCTTTTAACTCAAAGAATATTGGCTACTCTGCAGGTTTGCATGGCGTTGGTGACCTaGACAACACTCTTCATGAAG +
Preference number: 4 (lower is better)
Translates to: LITSLLLTQRILATLQVCMALVT*TTLFMK
Trigger: CTTCATGAAGAGTGTTGTGCAGGTCACCAACGCCAT...GCAAACCTGCAGAGTAGCCAATATTCTTTGAGTTAAAAGCAGAGAAGTTATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp GAGTGGTTACAAAAGCCCAGGCCTGACTTCACCCAATTCTCTAGTTTACTGTTTCTCTTGACCAAAAGCTaGATGGATTTGATAGTGATC +
Preference number: 4 (lower is better)
Translates to: EWLQKPRPDFTQFSSLLFLLTKS*MDLIVI
Trigger: GATCACTATCAAATCCATGCAGCTTTTGGTCAAGAG...AAACAGTAAACTAGAGAATTGGGTGAAGTCAGGCCTGGGCTTTTGTAACCACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GGTGTTATGCAGAGTTACATTTTACAATGGTTAGAGAGCTTAGACCTTTTACACTTGGGTAGAAATCTCTaGCATCTGCAGGCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: GVMQSYILQWLESLDLLHLGRNL*HLQAAD
Trigger: ATCCGCTGCCTGCAGATGCCAGAGATTTCTACCCAA...GTGTAAAAGGTCTAAGCTCTCTAACCATTGTAAAATGTAACTCTGCATAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp CTGATAACTTCTCTGCTTTTAACTCAAAGAATATTGGCTACTCTGCAGGTTTGCTCGAAGGTCTCGATCTaGTTGTTCAGCTCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: LITSLLLTQRILATLQVCSKVSI*LFSSLL
Trigger: CAGCAAAGAGCTGAACAACCAGATCGAGACCTTCGA...GCAAACCTGCAGAGTAGCCAATATTCTTTGAGTTAAAAGCAGAGAAGTTATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTCAGGAAACAGGTCTaGAAATTTGTCATCCTGGTC +
Preference number: 4 (lower is better)
Translates to: VEIYFRGRGELDTHSFTTVRKQV*KFVILV
Trigger: GACCAGGATGACAAATTTCCAGACCTGTTTCCTGAC...TGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp CAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAATCTTCACCTCCCCTTTaGAGAAATGCTTCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: QWRYISEGEESWIPILLQSSPPL*RNASWK
Trigger: TTTCCAAGAAGCATTTCTTCAAAGGGGAGGTGAAGA...TTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
ENSMUST00000135948.2
CDS-3UTR TCA 90 bp TATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCCAGAAATGCACACACTaGAACATGGTGGCCACACAT +
Preference number: 4 (lower is better)
Translates to: YISEGEESWIPILLQQFFQKCTH*NMVATH
Trigger: ATGTGTGGCCACCATGTTTCAGTGTGTGCATTTCTG...GAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
ENSMUST00000135948.2
CDS-3UTR GCA 90 bp GGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACAAATGAAAGCAAGTCCACATGCTTaGTCTTTCCAGCTATTCCAG +
Preference number: 4 (lower is better)
Translates to: GRGELDTHSFTTVFLQMKASPHA*SFQLFQ
Trigger: CTGGAATAGCTGGAAAGAGCAAGCATGTGGACTTGC...TTTCATTTGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp TATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCATGGCGTTGGTGACCTaGACAACACTCTTCATGAAG +
Preference number: 4 (lower is better)
Translates to: YISEGEESWIPILLQQFFMALVT*TTLFMK
Trigger: CTTCATGAAGAGTGTTGTGCAGGTCACCAACGCCAT...GAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GGTGTTATGCAGAGTTACATTTTACAATGGTTAGAGAGCTTAGACCTTTTACACAAGTCCTCTGGGTCTTaGATGCTTTTGATGGCGTTG +
Preference number: 4 (lower is better)
Translates to: GVMQSYILQWLESLDLLHKSSGS*MLLMAL
Trigger: CAACGCCATCAAAAGCATCCAAGACCCAGAGGACTT...GTGTAAAAGGTCTAAGCTCTCTAACCATTGTAAAATGTAACTCTGCATAACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp CTGATAACTTCTCTGCTTTTAACTCAAAGAATATTGGCTACTCTGCAGGTTTGCAACCAAGTGGTCAGGTaGTTCTGCTTTGATGATCAC +
Preference number: 4 (lower is better)
Translates to: LITSLLLTQRILATLQVCNQVVR*FCFDDH
Trigger: GTGATCATCAAAGCAGAACCACCTGACCACTTGGTT...GCAAACCTGCAGAGTAGCCAATATTCTTTGAGTTAAAAGCAGAGAAGTTATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp TTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACACTCTGTGCTTTCCTCTaGAGAGTAGAAAGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: FQRERRVGYPFFYNSFSTLCAFL*RVERLH
Trigger: ATGAAGCCTTTCTACTCTCCAGAGGAAAGCACAGAG...TGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp AGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACAAATGAATTCTCACAGAGCTTCTaGATGAGAGAGACAACCTCG +
Preference number: 4 (lower is better)
Translates to: RERRVGYPFFYNSFSTNEFSQSF*MRETTS
Trigger: CGAGGTTGTCTCTCTCATCCAGAAGCTCTGTGAGAA...TTCATTTGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp AGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACAAATGAATGTTCAGGAGGTTGGTaGCTTGGAAGAATGTACCAT +
Preference number: 4 (lower is better)
Translates to: RERRVGYPFFYNSFSTNECSGGW*LGRMYH
Trigger: ATGGTACATTCTTCCAAGTCACCAACCTCCTGAACA...TTCATTTGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp AGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACAAATGAAGGTGTCTGTCTTTGCTaGTTCACTGTCCATGATGTT +
Preference number: 4 (lower is better)
Translates to: RERRVGYPFFYNSFSTNEGVCLC*FTVHDV
Trigger: AACATCATGGACAGTGAATCAGCAAAGACAGACACC...TTCATTTGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp AGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACAAATGAATTGAGAGGCTTGAGATaGTGCTGCAGTTCATACATG +
Preference number: 4 (lower is better)
Translates to: RERRVGYPFFYNSFSTNELRGLR*CCSSYM
Trigger: CATGTATGAACTGCAGCATCATCTCAAGCCTCTCAA...TTCATTTGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp ATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACGAGTTTCTCAGAAACTaGATCAGCATATCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: ISEGEESWIPILLQQFFYEFLRN*ISISSQ
Trigger: CTGGGAAGATATGCTGATTCAGTTTCTGAGAAACTC...GTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp GGTGTTATGCAGAGTTACATTTTACAATGGTTAGAGAGCTTAGACCTTTTACACCTGTCATCTGTTCATTaGTGCTGTCGTTACTGTGAC +
Preference number: 4 (lower is better)
Translates to: GVMQSYILQWLESLDLLHLSSVH*CCRYCD
Trigger: GTCACAGTAACGACAGCATCAATGAACAGATGACAG...GTGTAAAAGGTCTAAGCTCTCTAACCATTGTAAAATGTAACTCTGCATAACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp TTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACAGTGGTCAGGTGGTTCTaGTTTGATGATCACAACTAT +
Preference number: 4 (lower is better)
Translates to: FQRERRVGYPFFYNSFSTVVRWF*FDDHNY
Trigger: ATAGTTGTGATCATCAAAGCAGAACCACCTGACCAC...TGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp AGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACAAATGAAAGGAGGTTGGTGACTTaGAAGAATGTACCATCATCC +
Preference number: 4 (lower is better)
Translates to: RERRVGYPFFYNSFSTNERRLVT*KNVPSS
Trigger: GGATGATGGTACATTCTTCCAAGTCACCAACCTCCT...TTCATTTGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp TATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTTGCTCATCTCCACCTaGCTGAAGAAGAACTTCATC +
Preference number: 4 (lower is better)
Translates to: YISEGEESWIPILLQQFFLLIST*LKKNFI
Trigger: GATGAAGTTCTTCTTCAGCCAGGTGGAGATGAGCAA...GAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp AGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACAAATGAATCTTCACCTCCCCTTTaGAGAAATGCTTCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: RERRVGYPFFYNSFSTNESSPPL*RNASWK
Trigger: TTTCCAAGAAGCATTTCTTCAAAGGGGAGGTGAAGA...TTCATTTGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
ENSMUST00000135948.2
CDS-3UTR GCA 90 bp GTCTACCACAAGAGTTGGCCTTGGGTTTCTAAAACTAAGTTAAACCGTTATATAGTGGTCAGGTGGTTCTaGTTTGATGATCACAACTAT +
Preference number: 4 (lower is better)
Translates to: VYHKSWPWVSKTKLNRYIVVRWF*FDDHNY
Trigger: ATAGTTGTGATCATCAAAGCAGAACCACCTGACCAC...TATATAACGGTTTAACTTAGTTTTAGAAACCCAAGGCCAACTCTTGTGGTAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR GCA 90 bp CTGATAACTTCTCTGCTTTTAACTCAAAGAATATTGGCTACTCTGCAGGTTTGCAAGAAAGCTCTGCACTaGTTAGAGATGGCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: LITSLLLTQRILATLQVCKKALH*LEMASK
Trigger: TTTTGAAGCCATCTCTAAGCAGTGCAGAGCTTTCTT...GCAAACCTGCAGAGTAGCCAATATTCTTTGAGTTAAAAGCAGAGAAGTTATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp TTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACAGTAGATAAGGTGAGCTaGACAGACACATATTTCAGA +
Preference number: 4 (lower is better)
Translates to: FQRERRVGYPFFYNSFSTVDKVS*TDTYFR
Trigger: TCTGAAATATGTGTCTGTCCAGCTCACCTTATCTAC...TGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp GTTTTTCTACAAATGAAAAGTGATTTGCCTTGCTGTGGCAGGTGTGACACCGATTCTTTACAGTATCCATaGTTACTTTGTGAACCATCT +
Preference number: 4 (lower is better)
Translates to: VFLQMKSDLPCCGRCDTDSLQYP*LLCEPS
Trigger: AGATGGTTCACAAAGTAACCATGGATACTGTAAAGA...ATCGGTGTCACACCTGCCACAGCAAGGCAAATCACTTTTCATTTGTAGAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CCA 90 bp TATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTAGCTTTAGGGAACTCATaGTATTTGCATACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: YFRGRGELDTHSFTTVFLALGNS*YLHTGS
Trigger: AGACCCTGTATGCAAATACCATGAGTTCCCTAAAGC...TAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR TCA 90 bp TATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCGAGCACATGTTTGTCTaGAAAACTGTCATCTGTTCA +
Preference number: 4 (lower is better)
Translates to: YISEGEESWIPILLQQFFEHMFV*KTVICS
Trigger: TGAACAGATGACAGTTTTTCAGACAAACATGTGCTC...GAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
ENSMUST00000135948.2
CDS-3UTR CCA 90 bp CAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAATCTTTACAGTATCCATaGTTACTTTGTGAACCATCT +
Preference number: 4 (lower is better)
Translates to: QWRYISEGEESWIPILLQSLQYP*LLCEPS
Trigger: AGATGGTTCACAAAGTAACCATGGATACTGTAAAGA...TTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 90 bp GAACCTCGACTGCAGCCGGCCCAGCAAGCCATGGAGCATGGTCCGTaGGAAGGGGACATTCTCAGCCACGGCCAGCCACACCTCTGTCAG +
Preference number: 5 (lower is better)
Translates to: EPRLQPAQQAMEHGP*EGDILSHGQPHLCQ
Trigger: CTGACAGAGGTGTGGCTGGCCGTGGCTGAGAATGTCCCCTTCGCACGGACCATGCTCCATGGCTTGCTGGGCCGGCTGCAGTCGAGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 90 bp AAGAAGACCCTATATCGCCCTCTCGGAGCTCAGCCAGGACCTTGGTaGGGGCCTCCATGCCTTCCGCCATGGCACTGCTGCTCACCTGCC +
Preference number: 5 (lower is better)
Translates to: KKTLYRPLGAQPGPW*GPPCLPPWHCCSPA
Trigger: GGCAGGTGAGCAGCAGTGCCATGGCGGAAGGCATGGAGGCCCTCACCAAGGTCCTGGCTGAGCTCCGAGAGGGCGATATAGGGTCTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 90 bp CCAGGCGCCAGATGTCAGCCTTGGAGGTGGCATTTATCTTGGCAGTaGACCTCGACTGCAGCCGGCCCAGCAAGCCATGGAGCATGGTCC +
Preference number: 5 (lower is better)
Translates to: PGARCQPWRWHLSWQ*TSTAAGPASHGAWS
Trigger: GGACCATGCTCCATGGCTTGCTGGGCCGGCTGCAGTCGAGGTTCACTGCCAAGATAAATGCCACCTCCAAGGCTGACATCTGGCGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 90 bp CCAAAGGAACTCTCCAGGGACTTCCAGCCCCAGAAATGCACACACTaGAACATGGTGGCCACACATGCCTGGGCCACGCTGGGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: PKELSRDFQPQKCTH*NMVATHAWATLGQG
Trigger: CCCCTGCCCCAGCGTGGCCCAGGCATGTGTGGCCACCATGTTTCAGTGTGTGCATTTCTGGGGCTGGAAGTCCCTGGAGAGTTCCTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
ENSMUST00000135948.2
CDS GCA 90 bp CCCTGCAGGGAGCCCAGGCACTTCTCCAGCAGGAGTTTTCGATACTaGTTCACCTTCCGGGGAGCACCGAGAGCCATGTTGCCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: PCREPRHFSSRSFRY*FTFRGAPRAMLPKA
Trigger: TGCCTTGGGCAACATGGCTCTCGGTGCTCCCCGGAAGGTGAAGCAGTATCGAAAACTCCTGCTGGAGAAGTGCCTGGGCTCCCTGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 90 bp GGGATCTCCTGCTCCCACATGTCAGCCATGGAAGGAGCAATGCTCTaGCTTAGGGTCCGCAGGAGGTTGAGCATGGCAATCCCCCGGCCT +
Preference number: 5 (lower is better)
Translates to: GISCSHMSAMEGAML*LRVRRRLSMAIPRP
Trigger: AGGCCGGGGGATTGCCATGCTCAACCTCCTGCGGACCCTAAGCCAGAGCATTGCTCCTTCCATGGCTGACATGTGGGAGCAGGAGATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 90 bp TTTATCTTGGCAGTGAACCTCGACTGCAGCCGGCCCAGCAAGCCATaGAGCATGGTCCGTGCGAAGGGGACATTCTCAGCCACGGCCAGC +
Preference number: 5 (lower is better)
Translates to: FILAVNLDCSRPSKP*SMVRAKGTFSATAS
Trigger: GCTGGCCGTGGCTGAGAATGTCCCCTTCGCACGGACCATGCTCCATGGCTTGCTGGGCCGGCTGCAGTCGAGGTTCACTGCCAAGATAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp GGGCTGAAGCTGCCCTTTGCCCCGTGGTTGGCTCTGGGATGTGATGGCCACACAATATCCCGCATCTGCTaGGAGGCAATGGCCACCAGC +
Preference number: 5 (lower is better)
Translates to: GLKLPFAPWLALGCDGHTISRIC*EAMATS
Trigger: GCTGGTGGCCATTGCCTCCAAGCAGATGCGGGATAT...TGTGTGGCCATCACATCCCAGAGCCAACCACGGGGCAAAGGGCAGCTTCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 90 bp ATGTCAGCCTTGGAGGTGGCATTTATCTTGGCAGTGAACCTCGACTaGAGCCGGCCCAGCAAGCCATGGAGCATGGTCCGTGCGAAGGGG +
Preference number: 5 (lower is better)
Translates to: MSALEVAFILAVNLD*SRPSKPWSMVRAKG
Trigger: CCCCTTCGCACGGACCATGCTCCATGGCTTGCTGGGCCGGCTGCAGTCGAGGTTCACTGCCAAGATAAATGCCACCTCCAAGGCTGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 90 bp GCAGCAGCTCAGGATCTCGGAGCCCATGCCCGTGAGCACCAGCTCTaGCAGCCTCTGCATGTAGTTCTCCATGTTCTGCATGCACAGCCT +
Preference number: 5 (lower is better)
Translates to: AAAQDLGAHAREHQL*QPLHVVLHVLHAQP
Trigger: AGGCTGTGCATGCAGAACATGGAGAACTACATGCAGAGGCTGGCAGAGCTGGTGCTCACGGGCATGGGCTCCGAGATCCTGAGCTGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 90 bp GGAGCACCGAGAGCCATGTTGCCCAAGGCACGCAGAGAGAGCACCTaGAAGGTCTCATCTTTGTCCTGCCCTGCACCCTTCTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: GAPRAMLPKARREST*KVSSLSCPAPFSSI
Trigger: GATGCTGGAGAAGGGTGCAGGGCAGGACAAAGATGAGACCTTGCAGGTGCTCTCTCTGCGTGCCTTGGGCAACATGGCTCTCGGTGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp CTCTGGGATGTGATGGCCACACAGCCAGGAGCCTGCACTCGGGAGAGCAGTGGAATCACCTGGCGCATCTaGGCTTCGTTGGCAAGTCTC +
Preference number: 5 (lower is better)
Translates to: LWDVMATQPGACTRESSGITWRI*ASLASL
Trigger: GAGACTTGCCAACGAAGCCAAGATGCGCCAGGTGAT...TCCACTGCTCTCCCGAGTGCAGGCTCCTGGCTGTGTGGCCATCACATCCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp ACAGGGGTCCGGAATCCCCTAGTGGAGGAGGCTGAGCTGGCCTGGGCAAGGGTGGAAGTCCTCTGGGTCTaGGATGCTTTTGATGGCGTT +
Preference number: 5 (lower is better)
Translates to: TGVRNPLVEEAELAWARVEVLWV*DAFDGV
Trigger: AACGCCATCAAAAGCATCCAAGACCCAGAGGACTTC...CACCCTTGCCCAGGCCAGCTCAGCCTCCTCCACTAGGGGATTCCGGACCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 90 bp CCAGTGTCCCCACACGGACAGCCTCTTTGCTCATCTCCACCTGGCTaGAGAAGAACTTCATCAGTTCCTTGGGGTAGGAGCGGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: PVSPHGQPLCSSPPG*RRTSSVPWGRSGPG
Trigger: CCCTGGCCCGCTCCTACCCCAAGGAACTGATGAAGTTCTTCTTCAGCCAGGTGGAGATGAGCAAAGAGGCTGTCCGTGTGGGGACACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 90 bp GGACGGTCTCCTGGTGGTAGTGTGCCAGCAGGAGGATGCCTTCAATaGGATGTCGCCTCACCTCTGGGTGATCCACCACTGGCAGGTGAA +
Preference number: 5 (lower is better)
Translates to: GRSPGGSVPAGGCLQ*DVASPLGDPPLAGE
Trigger: TTCACCTGCCAGTGGTGGATCACCCAGAGGTGAGGCGACATCTCATTGAAGGCATCCTCCTGCTGGCACACTACCACCAGGAGACCGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp ACAGGGGTCCGGAATCCCCTAGTGGAGGAGGCTGAGCTGGCCTGGGCAAGGGTGATGAATTCAAACACATaGCCATTGGCCAGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: TGVRNPLVEEAELAWARVMNSNT*PLASLA
Trigger: GGCCAAGCTGGCCAATGGCAATGTGTTTGAATTCAT...CACCCTTGCCCAGGCCAGCTCAGCCTCCTCCACTAGGGGATTCCGGACCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp GGCTCAGCTGAGGAGGAAGAGGCCTACAGGGCTGAAGCTGCCCTTTGCCCCGTGCCAGTAAGAGCAGATTaGTGGGCAAACTGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: GSAEEEEAYRAEAALCPVPVRAD*WANWKS
Trigger: GGACTTCCAGTTTGCCCACAAATCTGCTCTTACTGG...CACGGGGCAAAGGGCAGCTTCAGCCCTGTAGGCCTCTTCCTCCTCAGCTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp ACCCCCACAAAGGCTCAGCTGAGGAGGAAGAGGCCTACAGGGCTGAAGCTGCCCTCCAGGGGCTCTCTGTaGATCCTCTTGACCAAAAGC +
Preference number: 5 (lower is better)
Translates to: TPTKAQLRRKRPTGLKLPSRGSL*ILLTKS
Trigger: GCTTTTGGTCAAGAGGATCAACAGAGAGCCCCTGGA...GGGCAGCTTCAGCCCTGTAGGCCTCTTCCTCCTCAGCTGAGCCTTTGTGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 90 bp GAGTCTCACTGGCCACCTCGGCGGTCTCAAAATCCTCCGCCTCTGTaGTATCCCGCATCTGCTTGGAGGCAATGGCCACCAGCCTTTGTA +
Preference number: 5 (lower is better)
Translates to: ESHWPPRRSQNPPPL*YPASAWRQWPPAFV
Trigger: TACAAAGGCTGGTGGCCATTGCCTCCAAGCAGATGCGGGATATCACAGAGGCGGAGGATTTTGAGACCGCCGAGGTGGCCAGTGAGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 90 bp TCCAGGTTTTCAGGACAGGGGAGGCAGCTTCTGGCCCATGGCTGCTaGCAAGCTGCAGCAGGAAGGTATACAGCAGGTCAGGAAACAGGT +
Preference number: 5 (lower is better)
Translates to: SRFSGQGRQLLAHGC*QAAAGRYTAGQETG
Trigger: ACCTGTTTCCTGACCTGCTGTATACCTTCCTGCTGCAGCTTGGCAGCAGCCATGGGCCAGAAGCTGCCTCCCCTGTCCTGAAAACCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 90 bp ACAAGATCCACTTCTCCAGGAGATGCACAGTGTCCTGCAGCCCCTTaGGGTCCAGCTGTCTCTGCAGGAGGCCCTCCATCAGCTGCTTTA +
Preference number: 5 (lower is better)
Translates to: TRSTSPGDAQCPAAP*GPAVSAGGPPSAAL
Trigger: TAAAGCAGCTGATGGAGGGCCTCCTGCAGAGACAGCTGGACCCCAAGGGGCTGCAGGACACTGTGCATCTCCTGGAGAAGTGGATCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 90 bp CTGCCAGCCTCTGCATGTAGTTCTCCATGTTCTGCATGCACAGCCTaGCCATCAGGCTCACTCCCTCAAGGAAGGTGCCTCCGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: LPASACSSPCSACTA*PSGSLPQGRCLRSP
Trigger: TGGAGAACGGAGGCACCTTCCTTGAGGGAGTGAGCCTGATGGCCAGGCTGTGCATGCAGAACATGGAGAACTACATGCAGAGGCTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp CACCCCCACAAAGGCTCAGCTGAGGAGGAAGAGGCCTACAGGGCTGAAGCTGCCGGCAAGTCCACATGCTaGCTCTTTCCAGCTATTCCA +
Preference number: 5 (lower is better)
Translates to: HPHKGSAEEEEAYRAEAAGKSTC*LFPAIP
Trigger: TGGAATAGCTGGAAAGAGCAAGCATGTGGACTTGCC...GGCAGCTTCAGCCCTGTAGGCCTCTTCCTCCTCAGCTGAGCCTTTGTGGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp CACCCCCACAAAGGCTCAGCTGAGGAGGAAGAGGCCTACAGGGCTGAAGCTGCCATGCTTTTGATGGCGTaGGTGACCTGCACAACACTC +
Preference number: 5 (lower is better)
Translates to: HPHKGSAEEEEAYRAEAAMLLMA*VTCTTL
Trigger: GAGTGTTGTGCAGGTCACCAACGCCATCAAAAGCAT...GGCAGCTTCAGCCCTGTAGGCCTCTTCCTCCTCAGCTGAGCCTTTGTGGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp GGGCTGAAGCTGCCCTTTGCCCCGTGGTTGGCTCTGGGATGTGATGGCCACACAGAAGTCCTCTGGGTCTaGGATGCTTTTGATGGCGTT +
Preference number: 5 (lower is better)
Translates to: GLKLPFAPWLALGCDGHTEVLWV*DAFDGV
Trigger: AACGCCATCAAAAGCATCCAAGACCCAGAGGACTTC...TGTGTGGCCATCACATCCCAGAGCCAACCACGGGGCAAAGGGCAGCTTCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 90 bp CAGCCATGGAAGGAGCAATGCTCTGGCTTAGGGTCCGCAGGAGGTTaGGCATGGCAATCCCCCGGCCTTCTCCTTTATAGGGTGATGACA +
Preference number: 5 (lower is better)
Translates to: QPWKEQCSGLGSAGG*AWQSPGLLLYRVMT
Trigger: TGTCATCACCCTATAAAGGAGAAGGCCGGGGGATTGCCATGCTCAACCTCCTGCGGACCCTAAGCCAGAGCATTGCTCCTTCCATGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 90 bp AGGCCAAGCGGGTTCTTCTGTGGGCATCACAGGTACATGGAGCGATaGGTCCAACCAGTACTCCAAACTGCCCCAGCTTCAGCGGGATAC +
Preference number: 5 (lower is better)
Translates to: RPSGFFCGHHRYMER*VQPVLQTAPASAGY
Trigger: GTATCCCGCTGAAGCTGGGGCAGTTTGGAGTACTGGTTGGACTCATCGCTCCATGTACCTGTGATGCCCACAGAAGAACCCGCTTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 90 bp ACCTCGGCGGTCTCAAAATCCTCCGCCTCTGTGATATCCCGCATCTaGTTGGAGGCAATGGCCACCAGCCTTTGTATACAGTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: TSAVSKSSASVISRI*LEAMATSLCIQCSS
Trigger: GGAGGAGCACTGTATACAAAGGCTGGTGGCCATTGCCTCCAAGCAGATGCGGGATATCACAGAGGCGGAGGATTTTGAGACCGCCGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 90 bp AGGAGATGCACAGTGTCCTGCAGCCCCTTGGGGTCCAGCTGTCTCTaGAGGAGGCCCTCCATCAGCTGCTTTAGGGAACTCATGGTATTT +
Preference number: 5 (lower is better)
Translates to: RRCTVSCSPLGSSCL*RRPSISCFRELMVF
Trigger: AAATACCATGAGTTCCCTAAAGCAGCTGATGGAGGGCCTCCTGCAGAGACAGCTGGACCCCAAGGGGCTGCAGGACACTGTGCATCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 90 bp CGCATCTGGAGGAAGATGCCTATCCAGGTGACAGCAGCCCTGTCATaGTGCAGGTCCATGGCCCCAATGTTCTCACAGAGCTTCTGGATG +
Preference number: 5 (lower is better)
Translates to: RIWRKMPIQVTAALS*CRSMAPMFSQSFWM
Trigger: CATCCAGAAGCTCTGTGAGAACATTGGGGCCATGGACCTGCAGCATGACAGGGCTGCTGTCACCTGGATAGGCATCTTCCTCCAGATGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 90 bp TTCAGGACAGGGGAGGCAGCTTCTGGCCCATGGCTGCTGCCAAGCTaGAGCAGGAAGGTATACAGCAGGTCAGGAAACAGGTCTGGAAAT +
Preference number: 5 (lower is better)
Translates to: FRTGEAASGPWLLPS*SRKVYSRSGNRSGN
Trigger: ATTTCCAGACCTGTTTCCTGACCTGCTGTATACCTTCCTGCTGCAGCTTGGCAGCAGCCATGGGCCAGAAGCTGCCTCCCCTGTCCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 90 bp GGCCTGAGAGACTTGATGACTCCCAGTTTCACCTCAAGGTCCTGGTaGCGCAGCCACACGGTCACGAAGTATCGGTACATTGGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: GLRDLMTPSFTSRSW*RSHTVTKYRYIGKS
Trigger: GCTCTTCCCAATGTACCGATACTTCGTGACCGTGTGGCTGCGCCACCAGGACCTTGAGGTGAAACTGGGAGTCATCAAGTCTCTCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp TTGCCTTGCTGTGGCAGGTGTGACACCGATGAAGCAGTTCACTCGCATCAGGGCTGGTTGTTCAGCTCTTaGCTGAGCCGTAGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: LPCCGRCDTDEAVHSHQGWLFSS*LSRRLQ
Trigger: CTGGAGCCTACGGCTCAGCAAAGAGCTGAACAACCA...GCCCTGATGCGAGTGAACTGCTTCATCGGTGTCACACCTGCCACAGCAAGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 90 bp CATCACTACACAGGGATCCGTGGTAGCCTTCTCTGTGATTATCACTaGAGCCAAGGTCTTCCGCATGTCCAGGCCTGGCCCTGTGGTGTC +
Preference number: 5 (lower is better)
Translates to: HHYTGIRGSLLCDYH*SQGLPHVQAWPCGV
Trigger: GACACCACAGGGCCAGGCCTGGACATGCGGAAGACCTTGGCTTCAGTGATAATCACAGAGAAGGCTACCACGGATCCCTGTGTAGTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 90 bp ATGGAGATGGAGGGCCATGGCTTTCTCCCGTTCCCACTCTTTCTCTaGCAAGATCCACTTCTCCAGGAGATGCACAGTGTCCTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: MEMEGHGFLPFPLFL*QDPLLQEMHSVLQP
Trigger: GGGCTGCAGGACACTGTGCATCTCCTGGAGAAGTGGATCTTGTCAGAGAAAGAGTGGGAACGGGAGAAAGCCATGGCCCTCCATCTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 90 bp GGAGACGGGCCAGCAGCTTCTGGGGTGCAGGCAAGTCCACATGCTTaGTCTTTCCAGCTATTCCAGCCTCCGTGTCTTTGCCATGAATTT +
Preference number: 5 (lower is better)
Translates to: GDGPAASGVQASPHA*SFQLFQPPCLCHEF
Trigger: AAATTCATGGCAAAGACACGGAGGCTGGAATAGCTGGAAAGAGCAAGCATGTGGACTTGCCTGCACCCCAGAAGCTGCTGGCCCGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 90 bp ACGGTCACGAAGTATCGGTACATTGGGAAGAGCTTCACAGCAAACTaGTCCTCCGTCATCACGGGATACAGGCTGTCCTCCAGGTGCCTC +
Preference number: 5 (lower is better)
Translates to: TVTKYRYIGKSFTAN*SSVITGYRLSSRCL
Trigger: GAGGCACCTGGAGGACAGCCTGTATCCCGTGATGACGGAGGACCAGTTTGCTGTGAAGCTCTTCCCAATGTACCGATACTTCGTGACCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 90 bp AAGGTCCTGGTGGCGCAGCCACACGGTCACGAAGTATCGGTACATTaGGAAGAGCTTCACAGCAAACTGGTCCTCCGTCATCACGGGATA +
Preference number: 5 (lower is better)
Translates to: KVLVAQPHGHEVSVH*EELHSKLVLRHHGI
Trigger: TATCCCGTGATGACGGAGGACCAGTTTGCTGTGAAGCTCTTCCCAATGTACCGATACTTCGTGACCGTGTGGCTGCGCCACCAGGACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 90 bp ATGGGCCTGAGAGACTTGATGACTCCCAGTTTCACCTCAAGGTCCTaGTGGCGCAGCCACACGGTCACGAAGTATCGGTACATTGGGAAG +
Preference number: 5 (lower is better)
Translates to: MGLRDLMTPSFTSRS*WRSHTVTKYRYIGK
Trigger: CTTCCCAATGTACCGATACTTCGTGACCGTGTGGCTGCGCCACCAGGACCTTGAGGTGAAACTGGGAGTCATCAAGTCTCTCAGGCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 90 bp GATGCCTTCAATGAGATGTCGCCTCACCTCTGGGTGATCCACCACTaGCAGGTGAACCAAGATGGCACCCAGTATCTCAGCCACCTTGTC +
Preference number: 5 (lower is better)
Translates to: DAFNEMSPHLWVIHH*QVNQDGTQYLSHLV
Trigger: GACAAGGTGGCTGAGATACTGGGTGCCATCTTGGTTCACCTGCCAGTGGTGGATCACCCAGAGGTGAGGCGACATCTCATTGAAGGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp TGTGAGTACACATCAGGACACATGGGAGAGCATGCTTGTCCACCCCCACAAAGGTTGTCCTCCAGCTCCTaGACCCGCATCTGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: CEYTSGHMGEHACPPPQRLSSSS*TRIWRK
Trigger: CTTCCTCCAGATGCGGGTCAAGGAGCTGGAGGACAA...CCTTTGTGGGGGTGGACAAGCATGCTCTCCCATGTGTCCTGATGTGTACTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp ACCCCCACAAAGGCTCAGCTGAGGAGGAAGAGGCCTACAGGGCTGAAGCTGCCCGGACGGAGCACATGTTaGTCTGAAAAACTGTCATCT +
Preference number: 5 (lower is better)
Translates to: TPTKAQLRRKRPTGLKLPGRSTC*SEKLSS
Trigger: AGATGACAGTTTTTCAGACAAACATGTGCTCCGTCC...GGGCAGCTTCAGCCCTGTAGGCCTCTTCCTCCTCAGCTGAGCCTTTGTGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 90 bp GGGGTGTTGGTGGTAACCGATGCTTCTAGAATCTGCCTCAAGACCTaGAGAAGGGATGGGAATAAAGGCCAATGCCCGGTACCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: GVLVVTDASRICLKT*RRDGNKGQCPVPWN
Trigger: GTTCCAGGGTACCGGGCATTGGCCTTTATTCCCATCCCTTCTGCAGGTCTTGAGGCAGATTCTAGAAGCATCGGTTACCACCAACACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061013.13
CDS GCA 90 bp AACTCAGTGTGCTCTTCCAGGTACTGGACTAGCAGAGGGATCTCCTaGTCCCACATGTCAGCCATGGAAGGAGCAATGCTCTGGCTTAGG +
Preference number: 5 (lower is better)
Translates to: NSVCSSRYWTSRGIS*SHMSAMEGAMLWLR
Trigger: CCTAAGCCAGAGCATTGCTCCTTCCATGGCTGACATGTGGGAGCAGGAGATCCCTCTGCTAGTCCAGTACCTGGAAGAGCACACTGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 90 bp AGCCCCTTGGGGTCCAGCTGTCTCTGCAGGAGGCCCTCCATCAGCTaGTTTAGGGAACTCATGGTATTTGCATACAGGGTCTTAACAGAC +
Preference number: 5 (lower is better)
Translates to: SPLGSSCLCRRPSIS*FRELMVFAYRVLTD
Trigger: GTCTGTTAAGACCCTGTATGCAAATACCATGAGTTCCCTAAAGCAGCTGATGGAGGGCCTCCTGCAGAGACAGCTGGACCCCAAGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 90 bp ATCTGGAGGAAGATGCCTATCCAGGTGACAGCAGCCCTGTCATGCTaGAGGTCCATGGCCCCAATGTTCTCACAGAGCTTCTGGATGAGA +
Preference number: 5 (lower is better)
Translates to: IWRKMPIQVTAALSC*RSMAPMFSQSFWMR
Trigger: TCTCATCCAGAAGCTCTGTGAGAACATTGGGGCCATGGACCTGCAGCATGACAGGGCTGCTGTCACCTGGATAGGCATCTTCCTCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 90 bp GTTAATCGAGGCCAAGCGGGTTCTTCTGTGGGCATCACAGGTACATaGAGCGATGAGTCCAACCAGTACTCCAAACTGCCCCAGCTTCAG +
Preference number: 5 (lower is better)
Translates to: VNRGQAGSSVGITGT*SDESNQYSKLPQLQ
Trigger: CTGAAGCTGGGGCAGTTTGGAGTACTGGTTGGACTCATCGCTCCATGTACCTGTGATGCCCACAGAAGAACCCGCTTGGCCTCGATTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 90 bp AGCAGACTGGACAGGACGTTAATCGAGGCCAAGCGGGTTCTTCTGTaGGCATCACAGGTACATGGAGCGATGAGTCCAACCAGTACTCCA +
Preference number: 5 (lower is better)
Translates to: SRLDRTLIEAKRVLL*ASQVHGAMSPTSTP
Trigger: TGGAGTACTGGTTGGACTCATCGCTCCATGTACCTGTGATGCCCACAGAAGAACCCGCTTGGCCTCGATTAACGTCCTGTCCAGTCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp CTCTGGGATGTGATGGCCACACAGCCAGGAGCCTGCACTCGGGAGAGCAGTGGAGATGTTCATTTTGCGTaGGGTAGAAATCTCTGGCAT +
Preference number: 5 (lower is better)
Translates to: LWDVMATQPGACTRESSGDVHFA*GRNLWH
Trigger: ATGCCAGAGATTTCTACCCAACGCAAAATGAACATC...TCCACTGCTCTCCCGAGTGCAGGCTCCTGGCTGTGTGGCCATCACATCCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 90 bp ACATGCTTGCTCTTTCCAGCTATTCCAGCCTCCGTGTCTTTGCCATaGATTTGGTTCTCGGCCAGGTTCGTGAGGCTGATGCAGATGGGG +
Preference number: 5 (lower is better)
Translates to: TCLLFPAIPASVSLP*IWFSARFVRLMQMG
Trigger: CCCCATCTGCATCAGCCTCACGAACCTGGCCGAGAACCAAATTCATGGCAAAGACACGGAGGCTGGAATAGCTGGAAAGAGCAAGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 90 bp AGACCCCAGCCTTTGATCTTTTCCTGGAAGCCTGACAGAACCAGCTaGCCAATGATTCGCAGAATTGCCATCCGTACCTTGGACCGAGTG +
Preference number: 5 (lower is better)
Translates to: RPQPLIFSWKPDRTS*PMIRRIAIRTLDRV
Trigger: CACTCGGTCCAAGGTACGGATGGCAATTCTGCGAATCATTGGCCAGCTGGTTCTGTCAGGCTTCCAGGAAAAGATCAAAGGCTGGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 90 bp CAGGTCTTCTGGTTCCAGGTAAACTCAGTGTGCTCTTCCAGGTACTaGACTAGCAGAGGGATCTCCTGCTCCCACATGTCAGCCATGGAA +
Preference number: 5 (lower is better)
Translates to: QVFWFQVNSVCSSRY*TSRGISCSHMSAME
Trigger: TTCCATGGCTGACATGTGGGAGCAGGAGATCCCTCTGCTAGTCCAGTACCTGGAAGAGCACACTGAGTTTACCTGGAACCAGAAGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 90 bp CTGTCATGCTGCAGGTCCATGGCCCCAATGTTCTCACAGAGCTTCTaGATGAGAGAGACAACCTCGTCGCAGTTAAACTCTGGGCAAACC +
Preference number: 5 (lower is better)
Translates to: LSCCRSMAPMFSQSF*MRETTSSQLNSGQT
Trigger: GGTTTGCCCAGAGTTTAACTGCGACGAGGTTGTCTCTCTCATCCAGAAGCTCTGTGAGAACATTGGGGCCATGGACCTGCAGCATGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp TGTGAGTACACATCAGGACACATGGGAGAGCATGCTTGTCCACCCCCACAAAGGCGCATCTTGGCTTCGTaGGCAAGTCTCAACATCGTG +
Preference number: 5 (lower is better)
Translates to: CEYTSGHMGEHACPPPQRRILAS*ASLNIV
Trigger: CACGATGTTGAGACTTGCCAACGAAGCCAAGATGCG...CCTTTGTGGGGGTGGACAAGCATGCTCTCCCATGTGTCCTGATGTGTACTCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp ATGAACCTCCAGAGTAGGCATGACCTCTGTAGCGAGACCAACCCTTCTTTGGGCCGCATCTTGGCTTCGTaGGCAAGTCTCAACATCGTG +
Preference number: 5 (lower is better)
Translates to: MNLQSRHDLCSETNPSLGRILAS*ASLNIV
Trigger: CACGATGTTGAGACTTGCCAACGAAGCCAAGATGCG...GCCCAAAGAAGGGTTGGTCTCGCTACAGAGGTCATGCCTACTCTGGAGGTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 90 bp TCCTGCTCCTTGGAAGTTCCCCATAAAGAGCACGTCTGGCTTACATaGAGATCTAGCAGACTGGACAGGACGTTAATCGAGGCCAAGCGG +
Preference number: 5 (lower is better)
Translates to: SCSLEVPHKEHVWLT*RSSRLDRTLIEAKR
Trigger: CCGCTTGGCCTCGATTAACGTCCTGTCCAGTCTGCTAGATCTTCATGTAAGCCAGACGTGCTCTTTATGGGGAACTTCCAAGGAGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 90 bp CAGGAAACAGGTCTGGAAATTTGTCATCCTGGTCCATCTTTTCCATaGGGAGCTGGATGGTACACAGCGTCATCAGAGGGTCCACAGCGG +
Preference number: 5 (lower is better)
Translates to: QETGLEICHPGPSFP*GAGWYTASSEGPQR
Trigger: CCGCTGTGGACCCTCTGATGACGCTGTGTACCATCCAGCTCCTCATGGAAAAGATGGACCAGGATGACAAATTTCCAGACCTGTTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 90 bp ATCAGCATATCTTCCCAGGTCTTCTGGTTCCAGGTAAACTCAGTGTaGTCTTCCAGGTACTGGACTAGCAGAGGGATCTCCTGCTCCCAC +
Preference number: 5 (lower is better)
Translates to: ISISSQVFWFQVNSV*SSRYWTSRGISCSH
Trigger: GTGGGAGCAGGAGATCCCTCTGCTAGTCCAGTACCTGGAAGAGCACACTGAGTTTACCTGGAACCAGAAGACCTGGGAAGATATGCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 90 bp GCGACTCTGGAGGAAGCACTGGAAATCTTGTTCATGTCGGTGTCCTaGAGGTCCTCCTTACATTTCTGCAGCTCCTGCTCCTTGGAAGTT +
Preference number: 5 (lower is better)
Translates to: ATLEEALEILFMSVS*RSSLHFCSSCSLEV
Trigger: AACTTCCAAGGAGCAGGAGCTGCAGAAATGTAAGGAGGACCTCCAGGACACCGACATGAACAAGATTTCCAGTGCTTCCTCCAGAGTCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp GATGTAAGAGACGCTTCTCACCCATTGGTGCTCTCTGCTGGCAGTGACAAACATTCAAACACATTGCCATaGGCCAGCTTGGCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: DVRDASHPLVLSAGSDKHSNTLP*ASLARV
Trigger: CACCCTGGCCAAGCTGGCCAATGGCAATGTGTTTGA...ATGTTTGTCACTGCCAGCAGAGAGCACCAATGGGTGAGAAGCGTCTCTTACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp GATGTAAGAGACGCTTCTCACCCATTGGTGCTCTCTGCTGGCAGTGACAAACATATCACCTGGCGCATCTaGGCTTCGTTGGCAAGTCTC +
Preference number: 5 (lower is better)
Translates to: DVRDASHPLVLSAGSDKHITWRI*ASLASL
Trigger: GAGACTTGCCAACGAAGCCAAGATGCGCCAGGTGAT...ATGTTTGTCACTGCCAGCAGAGAGCACCAATGGGTGAGAAGCGTCTCTTACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp ATGCATCTGCCTTTTTGCTTTAGGAACAAGGTCCCTGGGGACAGGCTGGGCAGTGGCAAGTCCACATGCTaGCTCTTTCCAGCTATTCCA +
Preference number: 5 (lower is better)
Translates to: MHLPFCFRNKVPGDRLGSGKSTC*LFPAIP
Trigger: TGGAATAGCTGGAAAGAGCAAGCATGTGGACTTGCC...ACTGCCCAGCCTGTCCCCAGGGACCTTGTTCCTAAAGCAAAAAGGCAGATGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp CATTGGTGCTCTCTGCTGGCAGTGACAAACATGGTGTGTCTTCCTTCACCTGTGGTCTTAACAGACTCATaGTCTTCCCCTGGGGGTTGG +
Preference number: 5 (lower is better)
Translates to: HWCSLLAVTNMVCLPSPVVLTDS*SSPGGW
Trigger: CCAACCCCCAGGGGAAGACAATGAGTCTGTTAAGAC...CACAGGTGAAGGAAGACACACCATGTTTGTCACTGCCAGCAGAGAGCACCAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp CATTGGTGCTCTCTGCTGGCAGTGACAAACATGGTGTGTCTTCCTTCACCTGTGTGCAGCTCCTGCTCCTaGGAAGTTCCCCATAAAGAG +
Preference number: 5 (lower is better)
Translates to: HWCSLLAVTNMVCLPSPVCSSCS*EVPHKE
Trigger: CTCTTTATGGGGAACTTCCAAGGAGCAGGAGCTGCA...CACAGGTGAAGGAAGACACACCATGTTTGTCACTGCCAGCAGAGAGCACCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp GATGTAAGAGACGCTTCTCACCCATTGGTGCTCTCTGCTGGCAGTGACAAACATAGTATCTCAGCCACCTaGTCCTCCAGCTCCTTGACC +
Preference number: 5 (lower is better)
Translates to: DVRDASHPLVLSAGSDKHSISAT*SSSSLT
Trigger: GGTCAAGGAGCTGGAGGACAAGGTGGCTGAGATACT...ATGTTTGTCACTGCCAGCAGAGAGCACCAATGGGTGAGAAGCGTCTCTTACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp GTAAGAGACGCTTCTCACCCATTGGTGCTCTCTGCTGGCAGTGACAAACATGGTCGCCAGATGTCAGCCTaGGAGGTGGCATTTATCTTG +
Preference number: 5 (lower is better)
Translates to: VRDASHPLVLSAGSDKHGRQMSA*EVAFIL
Trigger: CAAGATAAATGCCACCTCCAAGGCTGACATCTGGCG...ACCATGTTTGTCACTGCCAGCAGAGAGCACCAATGGGTGAGAAGCGTCTCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp GTAAGAGACGCTTCTCACCCATTGGTGCTCTCTGCTGGCAGTGACAAACATGGTTCCAGGGGCTCTCTGTaGATCCTCTTGACCAAAAGC +
Preference number: 5 (lower is better)
Translates to: VRDASHPLVLSAGSDKHGSRGSL*ILLTKS
Trigger: GCTTTTGGTCAAGAGGATCAACAGAGAGCCCCTGGA...ACCATGTTTGTCACTGCCAGCAGAGAGCACCAATGGGTGAGAAGCGTCTCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 90 bp CCATCAACTCTGTGCTTTCCTCTGGAGAGTAGAAAGGCTTCATCGTaGTTAGTTGTGAGAGAGCATCCATTGCCATCGACCTCACGGGAG +
Preference number: 5 (lower is better)
Translates to: PSTLCFPLESRKASS*LVVREHPLPSTSRE
Trigger: CTCCCGTGAGGTCGATGGCAATGGATGCTCTCTCACAACTAAGCACGATGAAGCCTTTCTACTCTCCAGAGGAAAGCACAGAGTTGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 90 bp GAAATCTTGTTCATGTCGGTGTCCTGGAGGTCCTCCTTACATTTCTaGAGCTCCTGCTCCTTGGAAGTTCCCCATAAAGAGCACGTCTGG +
Preference number: 5 (lower is better)
Translates to: EILFMSVSWRSSLHF*SSCSLEVPHKEHVW
Trigger: CCAGACGTGCTCTTTATGGGGAACTTCCAAGGAGCAGGAGCTGCAGAAATGTAAGGAGGACCTCCAGGACACCGACATGAACAAGATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 90 bp CGGTGTCCTGGAGGTCCTCCTTACATTTCTGCAGCTCCTGCTCCTTaGAAGTTCCCCATAAAGAGCACGTCTGGCTTACATGAAGATCTA +
Preference number: 5 (lower is better)
Translates to: RCPGGPPYISAAPAP*KFPIKSTSGLHEDL
Trigger: TAGATCTTCATGTAAGCCAGACGTGCTCTTTATGGGGAACTTCCAAGGAGCAGGAGCTGCAGAAATGTAAGGAGGACCTCCAGGACACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp CTCTCTGCTGGCAGTGACAAACATGGTGTGTCTTCCTTCACCTGTGGTGATTTTTGGTTGTTCAGCTCTTaGCTGAGCCGTAGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: LSAGSDKHGVSSFTCGDFWLFSS*LSRRLQ
Trigger: CTGGAGCCTACGGCTCAGCAAAGAGCTGAACAACCA...AAAATCACCACAGGTGAAGGAAGACACACCATGTTTGTCACTGCCAGCAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp GATGTAAGAGACGCTTCTCACCCATTGGTGCTCTCTGCTGGCAGTGACAAACATGTCTTAACAGACTCATaGTCTTCCCCTGGGGGTTGG +
Preference number: 5 (lower is better)
Translates to: DVRDASHPLVLSAGSDKHVLTDS*SSPGGW
Trigger: CCAACCCCCAGGGGAAGACAATGAGTCTGTTAAGAC...ATGTTTGTCACTGCCAGCAGAGAGCACCAATGGGTGAGAAGCGTCTCTTACATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp GATGTAAGAGACGCTTCTCACCCATTGGTGCTCTCTGCTGGCAGTGACAAACATCGCCAGATGTCAGCCTaGGAGGTGGCATTTATCTTG +
Preference number: 5 (lower is better)
Translates to: DVRDASHPLVLSAGSDKHRQMSA*EVAFIL
Trigger: CAAGATAAATGCCACCTCCAAGGCTGACATCTGGCG...ATGTTTGTCACTGCCAGCAGAGAGCACCAATGGGTGAGAAGCGTCTCTTACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 90 bp CTCCAGCTGGTCCCACGGGTCTTCTTGAGGGAGTTTCTCAGAAACTaGATCAGCATATCTTCCCAGGTCTTCTGGTTCCAGGTAAACTCA +
Preference number: 5 (lower is better)
Translates to: LQLVPRVFLREFLRN*ISISSQVFWFQVNS
Trigger: TGAGTTTACCTGGAACCAGAAGACCTGGGAAGATATGCTGATTCAGTTTCTGAGAAACTCCCTCAAGAAGACCCGTGGGACCAGCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 90 bp TTCAACCGTAGCAGCTCGCTTTCGTTGTCGAAGAAAGCTCTGCACTaGTTAGAGATGGCTTCAAAAGAAGACCCTATATCGCCCTCTCGG +
Preference number: 5 (lower is better)
Translates to: FNRSSSLSLSKKALH*LEMASKEDPISPSR
Trigger: CCGAGAGGGCGATATAGGGTCTTCTTTTGAAGCCATCTCTAAGCAGTGCAGAGCTTTCTTCGACAACGAAAGCGAGCTGCTACGGTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 90 bp CTGCATGATGTTGTAGATGTTCATTTTGCGTTGGGTAGAAATCTCTaGCATCTGCAGGCAGCGGATGAGCGCGTTCATCACTACACAGGG +
Preference number: 5 (lower is better)
Translates to: LHDVVDVHFALGRNL*HLQAADERVHHYTG
Trigger: CCCTGTGTAGTGATGAACGCGCTCATCCGCTGCCTGCAGATGCCAGAGATTTCTACCCAACGCAAAATGAACATCTACAACATCATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 90 bp AGCTGGACAGACACATATTTCAGACCCCAGCCTTTGATCTTTTCCTaGAAGCCTGACAGAACCAGCTGGCCAATGATTCGCAGAATTGCC +
Preference number: 5 (lower is better)
Translates to: SWTDTYFRPQPLIFS*KPDRTSWPMIRRIA
Trigger: GGCAATTCTGCGAATCATTGGCCAGCTGGTTCTGTCAGGCTTCCAGGAAAAGATCAAAGGCTGGGGTCTGAAATATGTGTCTGTCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 90 bp AGCATCCATTGCCATCGACCTCACGGGAGAAACCAAGTGGTCAGGTaGTTCTGCTTTGATGATCACAACTATGAGGCCAGTAAGAGCAGA +
Preference number: 5 (lower is better)
Translates to: SIHCHRPHGRNQVVR*FCFDDHNYEASKSR
Trigger: TCTGCTCTTACTGGCCTCATAGTTGTGATCATCAAAGCAGAACCACCTGACCACTTGGTTTCTCCCGTGAGGTCGATGGCAATGGATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 90 bp GCCAAGCTGCAGCAGGAAGGTATACAGCAGGTCAGGAAACAGGTCTaGAAATTTGTCATCCTGGTCCATCTTTTCCATGAGGAGCTGGAT +
Preference number: 5 (lower is better)
Translates to: AKLQQEGIQQVRKQV*KFVILVHLFHEELD
Trigger: ATCCAGCTCCTCATGGAAAAGATGGACCAGGATGACAAATTTCCAGACCTGTTTCCTGACCTGCTGTATACCTTCCTGCTGCAGCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp GATGTAAGAGACGCTTCTCACCCATTGGTGCTCTCTGCTGGCAGTGACAAACATTTCAGACCCCAGCCTTaGATCTTTTCCTGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: DVRDASHPLVLSAGSDKHFRPQP*IFSWKP
Trigger: AGGCTTCCAGGAAAAGATCAAAGGCTGGGGTCTGAA...ATGTTTGTCACTGCCAGCAGAGAGCACCAATGGGTGAGAAGCGTCTCTTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp GATGTAAGAGACGCTTCTCACCCATTGGTGCTCTCTGCTGGCAGTGACAAACATATGCTTTTGATGGCGTaGGTGACCTGCACAACACTC +
Preference number: 5 (lower is better)
Translates to: DVRDASHPLVLSAGSDKHMLLMA*VTCTTL
Trigger: GAGTGTTGTGCAGGTCACCAACGCCATCAAAAGCAT...ATGTTTGTCACTGCCAGCAGAGAGCACCAATGGGTGAGAAGCGTCTCTTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp CTCTCTGCTGGCAGTGACAAACATGGTGTGTCTTCCTTCACCTGTGGTGATTTTAATGGCCACCAGCCTTaGTATACAGTGCTCCTCCAT +
Preference number: 5 (lower is better)
Translates to: LSAGSDKHGVSSFTCGDFNGHQP*YTVLLH
Trigger: ATGGAGGAGCACTGTATACAAAGGCTGGTGGCCATT...AAAATCACCACAGGTGAAGGAAGACACACCATGTTTGTCACTGCCAGCAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp AGCCCAGGCCTGACTTCACCCAATTCTCTAGTTTACTGTTTGTCTGCTTGGGCGTCAGGTGGTTCTGCTTaGATGATCACAACTATGAGG +
Preference number: 5 (lower is better)
Translates to: SPGLTSPNSLVYCLSAWASGGSA*MITTMR
Trigger: CCTCATAGTTGTGATCATCAAAGCAGAACCACCTGA...CGCCCAAGCAGACAAACAGTAAACTAGAGAATTGGGTGAAGTCAGGCCTGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp TGTGAGTACACATCAGGACACATGGGAGAGCATGCTTGTCCACCCCCACAAAGGACAGACACCAATACTTaGAACGTAGATCTGCATGAG +
Preference number: 5 (lower is better)
Translates to: CEYTSGHMGEHACPPPQRTDTNT*NVDLHE
Trigger: CTCATGCAGATCTACGTTCAAAGTATTGGTGTCTGT...CCTTTGTGGGGGTGGACAAGCATGCTCTCCCATGTGTCCTGATGTGTACTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp GAGCCCTGGGCACAGATGTGTGTGCATATGTTACGTGACACATCCTGGGCTAGTAACAGGTCTGGAAATTaGTCATCCTGGTCCATCTTT +
Preference number: 5 (lower is better)
Translates to: EPWAQMCVHMLRDTSWASNRSGN*SSWSIF
Trigger: AAAGATGGACCAGGATGACAAATTTCCAGACCTGTT...ACTAGCCCAGGATGTGTCACGTAACATATGCACACACATCTGTGCCCAGGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp AGCCCAGGCCTGACTTCACCCAATTCTCTAGTTTACTGTTTGTCTGCTTGGGCGTCTCTGTTGATCCTCTaGACCAAAAGCTGCATGGAT +
Preference number: 5 (lower is better)
Translates to: SPGLTSPNSLVYCLSAWASLLIL*TKSCMD
Trigger: ATCCATGCAGCTTTTGGTCAAGAGGATCAACAGAGA...CGCCCAAGCAGACAAACAGTAAACTAGAGAATTGGGTGAAGTCAGGCCTGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp CATTGGTGCTCTCTGCTGGCAGTGACAAACATGGTGTGTCTTCCTTCACCTGTGAAAAGCTGCATGGATTaGATAGTGATCCTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: HWCSLLAVTNMVCLPSPVKSCMD*IVILCR
Trigger: CCTGCAGAGGATCACTATCAAATCCATGCAGCTTTT...CACAGGTGAAGGAAGACACACCATGTTTGTCACTGCCAGCAGAGAGCACCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113130.8
CDS CCA 90 bp TCTGCTTTGATGATCACAACTATGAGGCCAGTAAGAGCAGATTTGTaGGCAAACTGGAAGTCCTCTGGGTCTTGGATGCTTTTGATGGCG +
Preference number: 5 (lower is better)
Translates to: SALMITTMRPVRADL*ANWKSSGSWMLLMA
Trigger: CGCCATCAAAAGCATCCAAGACCCAGAGGACTTCCAGTTTGCCCACAAATCTGCTCTTACTGGCCTCATAGTTGTGATCATCAAAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp TGTTGGTATAGCAATAAATCTGAGAGCCTGGCACCTTGCAGGATGCCTATTTTGGTCCCACGGGTCTTCTaGAGGGAGTTTCTCAGAAAC +
Preference number: 5 (lower is better)
Translates to: CWYSNKSESLAPCRMPILVPRVF*REFLRN
Trigger: GTTTCTGAGAAACTCCCTCAAGAAGACCCGTGGGAC...CAAAATAGGCATCCTGCAAGGTGCCAGGCTCTCAGATTTATTGCTATACCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp GGAGAGCAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTCATGAAGGCCATTTaGAGGCTGATGTCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: GEQWRYISEGEESWIPILFMKAI*RLMSWQ
Trigger: CTGCCAGGACATCAGCCTCAAAATGGCCTTCATGAA...AAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp TTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACAGTCTTCCCCTGGGGGTaGGAGGGAGATAACGGTGTG +
Preference number: 5 (lower is better)
Translates to: FQRERRVGYPFFYNSFSTVFPWG*EGDNGV
Trigger: CACACCGTTATCTCCCTCCAACCCCCAGGGGAAGAC...TGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 90 bp CATGGTATTTGCATACAGGGTCTTAACAGACTCATTGTCTTCCCCTaGGGGTTGGAGGGAGATAACGGTGTGTATGCTGATATCCATCAA +
Preference number: 5 (lower is better)
Translates to: HGICIQGLNRLIVFP*GLEGDNGVYADIHQ
Trigger: TTGATGGATATCAGCATACACACCGTTATCTCCCTCCAACCCCCAGGGGAAGACAATGAGTCTGTTAAGACCCTGTATGCAAATACCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp TCTCTATTTACTCTATTGGAGCGGAAAGGTTGCAGAAATCACCGCTGTGAGAAGCCAGTAAGAGCAGATTaGTGGGCAAACTGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: SLFTLLERKGCRNHRCEKPVRAD*WANWKS
Trigger: GGACTTCCAGTTTGCCCACAAATCTGCTCTTACTGG...CTTCTCACAGCGGTGATTTCTGCAACCTTTCCGCTCCAATAGAGTAAATAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp GGTGTTATGCAGAGTTACATTTTACAATGGTTAGAGAGCTTAGACCTTTTACACGTCTTCCCCTGGGGGTaGGAGGGAGATAACGGTGTG +
Preference number: 5 (lower is better)
Translates to: GVMQSYILQWLESLDLLHVFPWG*EGDNGV
Trigger: CACACCGTTATCTCCCTCCAACCCCCAGGGGAAGAC...GTGTAAAAGGTCTAAGCTCTCTAACCATTGTAAAATGTAACTCTGCATAACACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp ATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACTTGTCCTCCAGCTCCTaGACCCGCATCTGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: ISEGEESWIPILLQQFFYLSSSS*TRIWRK
Trigger: CTTCCTCCAGATGCGGGTCAAGGAGCTGGAGGACAA...GTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp GAGTGGTTACAAAAGCCCAGGCCTGACTTCACCCAATTCTCTAGTTTACTGTTTATGAATTCAAACACATaGCCATTGGCCAGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: EWLQKPRPDFTQFSSLLFMNSNT*PLASLA
Trigger: GGCCAAGCTGGCCAATGGCAATGTGTTTGAATTCAT...AAACAGTAAACTAGAGAATTGGGTGAAGTCAGGCCTGGGCTTTTGTAACCACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp TGTTGGTATAGCAATAAATCTGAGAGCCTGGCACCTTGCAGGATGCCTATTTTGCGAAGTATCGGTACATaGGGAAGAGCTTCACAGCAA +
Preference number: 5 (lower is better)
Translates to: CWYSNKSESLAPCRMPILRSIGT*GRASQQ
Trigger: TTGCTGTGAAGCTCTTCCCAATGTACCGATACTTCG...CAAAATAGGCATCCTGCAAGGTGCCAGGCTCTCAGATTTATTGCTATACCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp ATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACTGCAAGGTCTCATCTTaGTCCTGCCCTGCACCCTTC +
Preference number: 5 (lower is better)
Translates to: ISEGEESWIPILLQQFFYCKVSS*SCPAPF
Trigger: GAAGGGTGCAGGGCAGGACAAAGATGAGACCTTGCA...GTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp GGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACAAATGAAATCAAACACATTGCCATaGGCCAGCTTGGCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: GRGELDTHSFTTVFLQMKSNTLP*ASLARV
Trigger: CACCCTGGCCAAGCTGGCCAATGGCAATGTGTTTGA...TTTCATTTGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp GTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACATTCAGACCCCAGCCTTaGATCTTTTCCTGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: VEIYFRGRGELDTHSFTTFRPQP*IFSWKP
Trigger: AGGCTTCCAGGAAAAGATCAAAGGCTGGGGTCTGAA...TGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp TTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACAGTCCCACGGGTCTTCTaGAGGGAGTTTCTCAGAAAC +
Preference number: 5 (lower is better)
Translates to: FQRERRVGYPFFYNSFSTVPRVF*REFLRN
Trigger: GTTTCTGAGAAACTCCCTCAAGAAGACCCGTGGGAC...TGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp TTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACATGCAGCTCCTGCTCCTaGGAAGTTCCCCATAAAGAG +
Preference number: 5 (lower is better)
Translates to: FQRERRVGYPFFYNSFSTCSSCS*EVPHKE
Trigger: CTCTTTATGGGGAACTTCCAAGGAGCAGGAGCTGCA...TGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp GGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACAAATGAAAAGTATCTCAGCCACCTaGTCCTCCAGCTCCTTGACC +
Preference number: 5 (lower is better)
Translates to: GRGELDTHSFTTVFLQMKSISAT*SSSSLT
Trigger: GGTCAAGGAGCTGGAGGACAAGGTGGCTGAGATACT...TTTCATTTGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp TTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACAGAGGTGGCATTTATCTaGGCAGTGAACCTCGACTGC +
Preference number: 5 (lower is better)
Translates to: FQRERRVGYPFFYNSFSTEVAFI*AVNLDC
Trigger: GCAGTCGAGGTTCACTGCCAAGATAAATGCCACCTC...TGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp GAGAGCAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTCTCTGTTGATCCTCTaGACCAAAAGCTGCATGGAT +
Preference number: 5 (lower is better)
Translates to: ESSGDIFQRERRVGYPFFSLLIL*TKSCMD
Trigger: ATCCATGCAGCTTTTGGTCAAGAGGATCAACAGAGA...AAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp TATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTATGCAAGGTCTCATCTTaGTCCTGCCCTGCACCCTTC +
Preference number: 5 (lower is better)
Translates to: YFRGRGELDTHSFTTVFLCKVSS*SCPAPF
Trigger: GAAGGGTGCAGGGCAGGACAAAGATGAGACCTTGCA...TAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp GAGTGGTTACAAAAGCCCAGGCCTGACTTCACCCAATTCTCTAGTTTACTGTTTGGACGGAGCACATGTTaGTCTGAAAAACTGTCATCT +
Preference number: 5 (lower is better)
Translates to: EWLQKPRPDFTQFSSLLFGRSTC*SEKLSS
Trigger: AGATGACAGTTTTTCAGACAAACATGTGCTCCGTCC...AAACAGTAAACTAGAGAATTGGGTGAAGTCAGGCCTGGGCTTTTGTAACCACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp AGAGCAGTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTGGGCGGAGCACATGTTaGTCTGAAAAACTGTCATCT +
Preference number: 5 (lower is better)
Translates to: RAVEIYFRGRGELDTHSFGRSTC*SEKLSS
Trigger: AGATGACAGTTTTTCAGACAAACATGTGCTCCGCCC...AAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCACTGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000135948.2
CDS-3UTR CAA 90 bp GTGGAGATATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACACGAAGTATCGGTACATaGGGAAGAGCTTCACAGCAA +
Preference number: 5 (lower is better)
Translates to: VEIYFRGRGELDTHSFTTRSIGT*GRASQQ
Trigger: TTGCTGTGAAGCTCTTCCCAATGTACCGATACTTCG...TGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATATCTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp TGTTGGTATAGCAATAAATCTGAGAGCCTGGCACCTTGCAGGATGCCTATTTTGACAGACACCAATACTTaGAACGTAGATCTGCATGAG +
Preference number: 5 (lower is better)
Translates to: CWYSNKSESLAPCRMPILTDTNT*NVDLHE
Trigger: CTCATGCAGATCTACGTTCAAAGTATTGGTGTCTGT...CAAAATAGGCATCCTGCAAGGTGCCAGGCTCTCAGATTTATTGCTATACCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp GTCTACCACAAGAGTTGGCCTTGGGTTTCTAAAACTAAGTTAAACCGTTATATAGAGGTGGCATTTATCTaGGCAGTGAACCTCGACTGC +
Preference number: 5 (lower is better)
Translates to: VYHKSWPWVSKTKLNRYIEVAFI*AVNLDC
Trigger: GCAGTCGAGGTTCACTGCCAAGATAAATGCCACCTC...TATATAACGGTTTAACTTAGTTTTAGAAACCCAAGGCCAACTCTTGTGGTAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp TCTCTATTTACTCTATTGGAGCGGAAAGGTTGCAGAAATCACCGCTGTGAGAAGAACAGGTCTGGAAATTaGTCATCCTGGTCCATCTTT +
Preference number: 5 (lower is better)
Translates to: SLFTLLERKGCRNHRCEKNRSGN*SSWSIF
Trigger: AAAGATGGACCAGGATGACAAATTTCCAGACCTGTT...CTTCTCACAGCGGTGATTTCTGCAACCTTTCCGCTCCAATAGAGTAAATAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 90 bp CTTCATAATAATTCCCGCCAAGTTGCAGGCAGCAATTCTGATCCTTaGCAGATTGTTTTTCATGAAGACTGTTGTTTCCAACAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: LHNNSRQVAGSNSDP*QIVFHEDCCFQQEA
Trigger: GGCTTCCTGTTGGAAACAACAGTCTTCATGAAAAACAATCTGTCAAGGATCAGAATTGCTGCCTGCAACTTGGCGGGAATTATTATGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
ENSMUST00000135948.2
CDS-3UTR CAA 90 bp TATATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCAATGGCCACCAGCCTTaGTATACAGTGCTCCTCCAT +
Preference number: 5 (lower is better)
Translates to: YISEGEESWIPILLQQFFNGHQP*YTVLLH
Trigger: ATGGAGGAGCACTGTATACAAAGGCTGGTGGCCATT...GAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp TATTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTATTCATGAAGGCCATTTaGAGGCTGATGTCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: YFRGRGELDTHSFTTVFLFMKAI*RLMSWQ
Trigger: CTGCCAGGACATCAGCCTCAAAATGGCCTTCATGAA...TAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp TTTCAGAGGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACATCAGGTGGTTCTGCTTaGATGATCACAACTATGAGG +
Preference number: 5 (lower is better)
Translates to: FQRERRVGYPFFYNSFSTSGGSA*MITTMR
Trigger: CCTCATAGTTGTGATCATCAAAGCAGAACCACCTGA...TGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCCTCTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp GTCTACCACAAGAGTTGGCCTTGGGTTTCTAAAACTAAGTTAAACCGTTATATAGATGTTCATTTTGCGTaGGGTAGAAATCTCTGGCAT +
Preference number: 5 (lower is better)
Translates to: VYHKSWPWVSKTKLNRYIDVHFA*GRNLWH
Trigger: ATGCCAGAGATTTCTACCCAACGCAAAATGAACATC...TATATAACGGTTTAACTTAGTTTTAGAAACCCAAGGCCAACTCTTGTGGTAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS-3UTR CAA 90 bp GGGAGAGGAGAGTTGGATACCCATTCTTTTACAACAGTTTTTCTACAAATGAAAAAAAGCTGCATGGATTaGATAGTGATCCTGGACCTT +
Preference number: 5 (lower is better)
Translates to: GRGELDTHSFTTVFLQMKKSCMD*IVILDL
Trigger: AAGGTCCAGGATCACTATCAAATCCATGCAGCTTTT...TTTCATTTGTAGAAAAACTGTTGTAAAAGAATGGGTATCCAACTCTCCTCTCCC
39% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000061013.13
CDS GCA 72 bp CTGCAGCCGGCCCAGCAAGCCATGGAGCATGGTCCGTaGGAAGGGGACATTCTCAGCCACGGCCAGCCACAC +
Preference number: 6 (lower is better)
Translates to: LQPAQQAMEHGP*EGDILSHGQPH
Trigger: GTGTGGCTGGCCGTGGCTGAGAATGTCCCCTTCGCACGGACCATGCTCCATGGCTTGCTGGGCCGGCTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 72 bp ACCTCGACTGCAGCCGGCCCAGCAAGCCATGGAGCATaGTCCGTGCGAAGGGGACATTCTCAGCCACGGCCA +
Preference number: 6 (lower is better)
Translates to: TSTAAGPASHGA*SVRRGHSQPRP
Trigger: TGGCCGTGGCTGAGAATGTCCCCTTCGCACGGACCATGCTCCATGGCTTGCTGGGCCGGCTGCAGTCGAGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 72 bp CTATATCGCCCTCTCGGAGCTCAGCCAGGACCTTGGTaGGGGCCTCCATGCCTTCCGCCATGGCACTGCTGC +
Preference number: 6 (lower is better)
Translates to: LYRPLGAQPGPW*GPPCLPPWHCC
Trigger: GCAGCAGTGCCATGGCGGAAGGCATGGAGGCCCTCACCAAGGTCCTGGCTGAGCTCCGAGAGGGCGATATAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 72 bp GCAGTGAACCTCGACTGCAGCCGGCCCAGCAAGCCATaGAGCATGGTCCGTGCGAAGGGGACATTCTCAGCC +
Preference number: 6 (lower is better)
Translates to: AVNLDCSRPSKP*SMVRAKGTFSA
Trigger: GGCTGAGAATGTCCCCTTCGCACGGACCATGCTCCATGGCTTGCTGGGCCGGCTGCAGTCGAGGTTCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 90 bp ACAGCGGCCAGGCGCCAGATGTCAGCCTTGGAGGTGGCATTTATCTaGGCAGTGAACCTCGACTGCAGCCGGCCCAGCAAGCCATGGAGC +
Preference number: 6 (lower is better)
Translates to: TAARRQMSALEVAFI*AVNLDCSRPSKPWS
Trigger: GCTCCATGGCTTGCTGGGCCGGCTGCAGTCGAGGTTCACTGCCAAGATAAATGCCACCTCCAAGGCTGACATCTGGCGCCTGGCCGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 72 bp AAGGTGCCTCCGTTCTCCAGCAGGGACCACACAGACTaGTCCTCCAAGGCCTGCTCCAGGGGCTCTCTGTTG +
Preference number: 6 (lower is better)
Translates to: KVPPFSSRDHTD*SSKACSRGSLL
Trigger: CAACAGAGAGCCCCTGGAGCAGGCCTTGGAGGAGCAGTCTGTGTGGTCCCTGCTGGAGAACGGAGGCACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 72 bp GGGGAGGCAGCTTCTGGCCCATGGCTGCTGCCAAGCTaGAGCAGGAAGGTATACAGCAGGTCAGGAAACAGG +
Preference number: 6 (lower is better)
Translates to: GEAASGPWLLPS*SRKVYSRSGNR
Trigger: CCTGTTTCCTGACCTGCTGTATACCTTCCTGCTGCAGCTTGGCAGCAGCCATGGGCCAGAAGCTGCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 72 bp ACAGCCTGGCCATCAGGCTCACTCCCTCAAGGAAGGTaGCTCCGTTCTCCAGCAGGGACCACACAGACTGCT +
Preference number: 6 (lower is better)
Translates to: TAWPSGSLPQGR*LRSPAGTTQTA
Trigger: AGCAGTCTGTGTGGTCCCTGCTGGAGAACGGAGGCACCTTCCTTGAGGGAGTGAGCCTGATGGCCAGGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 72 bp CGCAGAGAGAGCACCTGCAAGGTCTCATCTTTGTCCTaGCCTGCACCCTTCTCCAGCATCAGCACCACCGGC +
Preference number: 6 (lower is better)
Translates to: RRESTCKVSSLS*PAPFSSISTTG
Trigger: GCCGGTGGTGCTGATGCTGGAGAAGGGTGCAGGGCAGGACAAAGATGAGACCTTGCAGGTGCTCTCTCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 72 bp ACTGCTTCACCTTCCGGGGAGCACCGAGAGCCATGTTaGCCAAGGCACGCAGAGAGAGCACCTGCAAGGTCT +
Preference number: 6 (lower is better)
Translates to: TASPSGEHREPC*PRHAERAPARS
Trigger: AGACCTTGCAGGTGCTCTCTCTGCGTGCCTTGGGCAACATGGCTCTCGGTGCTCCCCGGAAGGTGAAGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 72 bp TACTGCTTCACCTTCCGGGGAGCACCGAGAGCCATGTaGCCCAAGGCACGCAGAGAGAGCACCTGCAAGGTC +
Preference number: 6 (lower is better)
Translates to: YCFTFRGAPRAM*PKARRESTCKV
Trigger: GACCTTGCAGGTGCTCTCTCTGCGTGCCTTGGGCAACATGGCTCTCGGTGCTCCCCGGAAGGTGAAGCAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 72 bp TGGCCACCTCGGCGGTCTCAAAATCCTCCGCCTCTGTaGTATCCCGCATCTGCTTGGAGGCAATGGCCACCA +
Preference number: 6 (lower is better)
Translates to: WPPRRSQNPPPL*YPASAWRQWPP
Trigger: TGGTGGCCATTGCCTCCAAGCAGATGCGGGATATCACAGAGGCGGAGGATTTTGAGACCGCCGAGGTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 72 bp CTCTCCAGGGACTTCCAGCCCCAGAAATGCACACACTaGAACATGGTGGCCACACATGCCTGGGCCACGCTG +
Preference number: 6 (lower is better)
Translates to: LSRDFQPQKCTH*NMVATHAWATL
Trigger: CAGCGTGGCCCAGGCATGTGTGGCCACCATGTTTCAGTGTGTGCATTTCTGGGGCTGGAAGTCCCTGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
ENSMUST00000135948.2
CDS GCA 72 bp CTCAAGACCTGCAGAAGGGATGGGAATAAAGGCCAATaGCCGGTACCCTGGAACTCAGCCAGCAGCAGGGGG +
Preference number: 6 (lower is better)
Translates to: LKTCRRDGNKGQ*PVPWNSASSRG
Trigger: CCCCCTGCTGCTGGCTGAGTTCCAGGGTACCGGGCATTGGCCTTTATTCCCATCCCTTCTGCAGGTCTTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061013.13
CDS GCA 72 bp AGAGAGCACCTGCAAGGTCTCATCTTTGTCCTGCCCTaGACCCTTCTCCAGCATCAGCACCACCGGCCTCAG +
Preference number: 6 (lower is better)
Translates to: REHLQGLIFVLP*TLLQHQHHRPQ
Trigger: CTGAGGCCGGTGGTGCTGATGCTGGAGAAGGGTGCAGGGCAGGACAAAGATGAGACCTTGCAGGTGCTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 72 bp CTCCATCAGGTTCTGACTGCTGAACTGCTGCTGGGCTaGGGCCTTGGAGCACACCTGGACGTGCAACTCTGT +
Preference number: 6 (lower is better)
Translates to: LHQVLTAELLLG*GLGAHLDVQLC
Trigger: ACAGAGTTGCACGTCCAGGTGTGCTCCAAGGCCCCAGCCCAGCAGCAGTTCAGCAGTCAGAACCTGATGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 72 bp ATTAGGGCACTCTTCACCGTCTCTCGCCTCCAGGGGTaGTCTTTCCTCCAGGCACCGATCTGCCAGGACTGT +
Preference number: 6 (lower is better)
Translates to: IRALFTVSRLQG*SFLQAPICQDC
Trigger: ACAGTCCTGGCAGATCGGTGCCTGGAGGAAAGACCACCCCTGGAGGCGAGAGACGGTGAAGAGTGCCCTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 72 bp AGGCGCCAGATGTCAGCCTTGGAGGTGGCATTTATCTaGGCAGTGAACCTCGACTGCAGCCGGCCCAGCAAG +
Preference number: 6 (lower is better)
Translates to: RRQMSALEVAFI*AVNLDCSRPSK
Trigger: CTTGCTGGGCCGGCTGCAGTCGAGGTTCACTGCCAAGATAAATGCCACCTCCAAGGCTGACATCTGGCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 90 bp TCCAAGGAGGGGCTGTCGAAGGTCTCGATCTGGTTGTTCAGCTCTTaGCTGAGCCGTAGGCTCCAGCTGGTCCCACGGGTCTTCTTGAGG +
Preference number: 6 (lower is better)
Translates to: SKEGLSKVSIWLFSS*LSRRLQLVPRVFLR
Trigger: CCTCAAGAAGACCCGTGGGACCAGCTGGAGCCTACGGCTCAGCAAAGAGCTGAACAACCAGATCGAGACCTTCGACAGCCCCTCCTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 90 bp GACAAGATCCACTTCTCCAGGAGATGCACAGTGTCCTGCAGCCCCTaGGGGTCCAGCTGTCTCTGCAGGAGGCCCTCCATCAGCTGCTTT +
Preference number: 6 (lower is better)
Translates to: DKIHFSRRCTVSCSP*GSSCLCRRPSISCF
Trigger: AAAGCAGCTGATGGAGGGCCTCCTGCAGAGACAGCTGGACCCCAAGGGGCTGCAGGACACTGTGCATCTCCTGGAGAAGTGGATCTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 90 bp AGGTCGTCATTAGGCAGGAGAAGGCTCAGCATGGGCCTGAGAGACTaGATGACTCCCAGTTTCACCTCAAGGTCCTGGTGGCGCAGCCAC +
Preference number: 6 (lower is better)
Translates to: RSSLGRRRLSMGLRD*MTPSFTSRSWWRSH
Trigger: GTGGCTGCGCCACCAGGACCTTGAGGTGAAACTGGGAGTCATCAAGTCTCTCAGGCCCATGCTGAGCCTTCTCCTGCCTAATGACGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 72 bp AGGGCTATGAAGCAGTGCACGATCTCCATCAGGTTCTaGCTGCTGAACTGCTGCTGGGCTGGGGCCTTGGAG +
Preference number: 6 (lower is better)
Translates to: RAMKQCTISIRF*LLNCCWAGALE
Trigger: CTCCAAGGCCCCAGCCCAGCAGCAGTTCAGCAGTCAGAACCTGATGGAGATCGTGCACTGCTTCATAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 72 bp CATCAGCACCAGGAGACGGGCCAGCAGCTTCTGGGGTaGAGGCAAGTCCACATGCTTGCTCTTTCCAGCTAT +
Preference number: 6 (lower is better)
Translates to: HQHQETGQQLLG*RQVHMLALSSY
Trigger: ATAGCTGGAAAGAGCAAGCATGTGGACTTGCCTGCACCCCAGAAGCTGCTGGCCCGTCTCCTGGTGCTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 72 bp TTGGAGGTGGCATTTATCTTGGCAGTGAACCTCGACTaGAGCCGGCCCAGCAAGCCATGGAGCATGGTCCGT +
Preference number: 6 (lower is better)
Translates to: LEVAFILAVNLD*SRPSKPWSMVR
Trigger: ACGGACCATGCTCCATGGCTTGCTGGGCCGGCTGCAGTCGAGGTTCACTGCCAAGATAAATGCCACCTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 72 bp TTTTCAGGACAGGGGAGGCAGCTTCTGGCCCATGGCTaGTGCCAAGCTGCAGCAGGAAGGTATACAGCAGGT +
Preference number: 6 (lower is better)
Translates to: FSGQGRQLLAHG*CQAAAGRYTAG
Trigger: ACCTGCTGTATACCTTCCTGCTGCAGCTTGGCAGCAGCCATGGGCCAGAAGCTGCCTCCCCTGTCCTGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 72 bp TCCAGCAGGGACCACACAGACTGCTCCTCCAAGGCCTaGTCCAGGGGCTCTCTGTTGATCCTCTTGACCAAA +
Preference number: 6 (lower is better)
Translates to: SSRDHTDCSSKA*SRGSLLILLTK
Trigger: TTTGGTCAAGAGGATCAACAGAGAGCCCCTGGAGCAGGCCTTGGAGGAGCAGTCTGTGTGGTCCCTGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 72 bp AGAGCCATGTTGCCCAAGGCACGCAGAGAGAGCACCTaGAAGGTCTCATCTTTGTCCTGCCCTGCACCCTTC +
Preference number: 6 (lower is better)
Translates to: RAMLPKARREST*KVSSLSCPAPF
Trigger: GAAGGGTGCAGGGCAGGACAAAGATGAGACCTTGCAGGTGCTCTCTCTGCGTGCCTTGGGCAACATGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 72 bp GAGCCCAGGCACTTCTCCAGCAGGAGTTTTCGATACTaGTTCACCTTCCGGGGAGCACCGAGAGCCATGTTG +
Preference number: 6 (lower is better)
Translates to: EPRHFSSRSFRY*FTFRGAPRAML
Trigger: CAACATGGCTCTCGGTGCTCCCCGGAAGGTGAAGCAGTATCGAAAACTCCTGCTGGAGAAGTGCCTGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 72 bp CCTCTGGGTGATCCACCACTGGCAGGTGAACCAAGATaGCACCCAGTATCTCAGCCACCTTGTCCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: PLGDPPLAGEPR*HPVSQPPCPPA
Trigger: AGCTGGAGGACAAGGTGGCTGAGATACTGGGTGCCATCTTGGTTCACCTGCCAGTGGTGGATCACCCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 72 bp CACCACCGGCCTCAGCAGCTTCTCCTGGTGCAGAACTaGGTCGCTCATGAATTCTACACAGATGGCCGTGCT +
Preference number: 6 (lower is better)
Translates to: HHRPQQLLLVQN*VAHEFYTDGRA
Trigger: AGCACGGCCATCTGTGTAGAATTCATGAGCGACCCAGTTCTGCACCAGGAGAAGCTGCTGAGGCCGGTGGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 72 bp ACAGGGATCCGTGGTAGCCTTCTCTGTGATTATCACTaGAGCCAAGGTCTTCCGCATGTCCAGGCCTGGCCC +
Preference number: 6 (lower is better)
Translates to: TGIRGSLLCDYH*SQGLPHVQAWP
Trigger: GGGCCAGGCCTGGACATGCGGAAGACCTTGGCTTCAGTGATAATCACAGAGAAGGCTACCACGGATCCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 72 bp AAGGAGCAATGCTCTGGCTTAGGGTCCGCAGGAGGTTaGGCATGGCAATCCCCCGGCCTTCTCCTTTATAGG +
Preference number: 6 (lower is better)
Translates to: KEQCSGLGSAGG*AWQSPGLLLYR
Trigger: CCTATAAAGGAGAAGGCCGGGGGATTGCCATGCTCAACCTCCTGCGGACCCTAAGCCAGAGCATTGCTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 72 bp CTTCCACCCTGTCGGCCTCCAGACCCATGCCTAAGGTaGAACCCAGGGCCCTGTACAGAAAACCCTTTTCCA +
Preference number: 6 (lower is better)
Translates to: LPPCRPPDPCLR*NPGPCTENPFP
Trigger: TGGAAAAGGGTTTTCTGTACAGGGCCCTGGGTTTCACCTTAGGCATGGGTCTGGAGGCCGACAGGGTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 72 bp CCAGCAGCTTCTGGGGTGCAGGCAAGTCCACATGCTTaGTCTTTCCAGCTATTCCAGCCTCCGTGTCTTTGC +
Preference number: 6 (lower is better)
Translates to: PAASGVQASPHA*SFQLFQPPCLC
Trigger: GCAAAGACACGGAGGCTGGAATAGCTGGAAAGAGCAAGCATGTGGACTTGCCTGCACCCCAGAAGCTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 72 bp AGGAAGATGCCTATCCAGGTGACAGCAGCCCTGTCATaGTGCAGGTCCATGGCCCCAATGTTCTCACAGAGC +
Preference number: 6 (lower is better)
Translates to: RKMPIQVTAALS*CRSMAPMFSQS
Trigger: GCTCTGTGAGAACATTGGGGCCATGGACCTGCAGCATGACAGGGCTGCTGTCACCTGGATAGGCATCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 72 bp TGCTCCCACATGTCAGCCATGGAAGGAGCAATGCTCTaGCTTAGGGTCCGCAGGAGGTTGAGCATGGCAATC +
Preference number: 6 (lower is better)
Translates to: CSHMSAMEGAML*LRVRRRLSMAI
Trigger: GATTGCCATGCTCAACCTCCTGCGGACCCTAAGCCAGAGCATTGCTCCTTCCATGGCTGACATGTGGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 72 bp CCCTTTTCCAAGGAGGGGCTGTCGAAGGTCTCGATCTaGTTGTTCAGCTCTTTGCTGAGCCGTAGGCTCCAG +
Preference number: 6 (lower is better)
Translates to: PFSKEGLSKVSI*LFSSLLSRRLQ
Trigger: CTGGAGCCTACGGCTCAGCAAAGAGCTGAACAACCAGATCGAGACCTTCGACAGCCCCTCCTTGGAAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 72 bp GGCCAAGCGGGTTCTTCTGTGGGCATCACAGGTACATaGAGCGATGAGTCCAACCAGTACTCCAAACTGCCC +
Preference number: 6 (lower is better)
Translates to: GQAGSSVGITGT*SDESNQYSKLP
Trigger: GGGCAGTTTGGAGTACTGGTTGGACTCATCGCTCCATGTACCTGTGATGCCCACAGAAGAACCCGCTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 72 bp ATCCCGCATCTGCTTGGAGGCAATGGCCACCAGCCTTaGTATACAGTGCTCCTCCATCTCCCCTTCCTGCTG +
Preference number: 6 (lower is better)
Translates to: IPHLLGGNGHQP*YTVLLHLPFLL
Trigger: CAGCAGGAAGGGGAGATGGAGGAGCACTGTATACAAAGGCTGGTGGCCATTGCCTCCAAGCAGATGCGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 72 bp GCCAGCAGCTTCTGGGGTGCAGGCAAGTCCACATGCTaGCTCTTTCCAGCTATTCCAGCCTCCGTGTCTTTG +
Preference number: 6 (lower is better)
Translates to: ASSFWGAGKSTC*LFPAIPASVSL
Trigger: CAAAGACACGGAGGCTGGAATAGCTGGAAAGAGCAAGCATGTGGACTTGCCTGCACCCCAGAAGCTGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 90 bp TCGGCGGTCTCAAAATCCTCCGCCTCTGTGATATCCCGCATCTGCTaGGAGGCAATGGCCACCAGCCTTTGTATACAGTGCTCCTCCATC +
Preference number: 6 (lower is better)
Translates to: SAVSKSSASVISRIC*EAMATSLCIQCSSI
Trigger: GATGGAGGAGCACTGTATACAAAGGCTGGTGGCCATTGCCTCCAAGCAGATGCGGGATATCACAGAGGCGGAGGATTTTGAGACCGCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 90 bp GACAGAACCAGCTGGCCAATGATTCGCAGAATTGCCATCCGTACCTaGGACCGAGTGTCAGAGAGAGTGTTCTTGACGACGCGGATGGCC +
Preference number: 6 (lower is better)
Translates to: DRTSWPMIRRIAIRT*DRVSERVFLTTRMA
Trigger: GGCCATCCGCGTCGTCAAGAACACTCTCTCTGACACTCGGTCCAAGGTACGGATGGCAATTCTGCGAATCATTGGCCAGCTGGTTCTGTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 90 bp AGTTTTCGATACTGCTTCACCTTCCGGGGAGCACCGAGAGCCATGTaGCCCAAGGCACGCAGAGAGAGCACCTGCAAGGTCTCATCTTTG +
Preference number: 6 (lower is better)
Translates to: SFRYCFTFRGAPRAM*PKARRESTCKVSSL
Trigger: CAAAGATGAGACCTTGCAGGTGCTCTCTCTGCGTGCCTTGGGCAACATGGCTCTCGGTGCTCCCCGGAAGGTGAAGCAGTATCGAAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 72 bp AGATGGGGGTCAGTGCCTCGGTGTAGTCTGTCTCCATaGTGTAGCACAGGAGCCTCACCCAGAACTCATTGG +
Preference number: 6 (lower is better)
Translates to: RWGSVPRCSLSP*CSTGASPRTHW
Trigger: CCAATGAGTTCTGGGTGAGGCTCCTGTGCTACATCATGGAGACAGACTACACCGAGGCACTGACCCCCATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 72 bp TGCTCTTCCAGGTACTGGACTAGCAGAGGGATCTCCTaGTCCCACATGTCAGCCATGGAAGGAGCAATGCTC +
Preference number: 6 (lower is better)
Translates to: CSSRYWTSRGIS*SHMSAMEGAML
Trigger: GAGCATTGCTCCTTCCATGGCTGACATGTGGGAGCAGGAGATCCCTCTGCTAGTCCAGTACCTGGAAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 72 bp GTGGCGCAGCCACACGGTCACGAAGTATCGGTACATTaGGAAGAGCTTCACAGCAAACTGGTCCTCCGTCAT +
Preference number: 6 (lower is better)
Translates to: VAQPHGHEVSVH*EELHSKLVLRH
Trigger: ATGACGGAGGACCAGTTTGCTGTGAAGCTCTTCCCAATGTACCGATACTTCGTGACCGTGTGGCTGCGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 72 bp AGAGACTTGATGACTCCCAGTTTCACCTCAAGGTCCTaGTGGCGCAGCCACACGGTCACGAAGTATCGGTAC +
Preference number: 6 (lower is better)
Translates to: RDLMTPSFTSRS*WRSHTVTKYRY
Trigger: GTACCGATACTTCGTGACCGTGTGGCTGCGCCACCAGGACCTTGAGGTGAAACTGGGAGTCATCAAGTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 72 bp GACAGGACGTTAATCGAGGCCAAGCGGGTTCTTCTGTaGGCATCACAGGTACATGGAGCGATGAGTCCAACC +
Preference number: 6 (lower is better)
Translates to: DRTLIEAKRVLL*ASQVHGAMSPT
Trigger: GGTTGGACTCATCGCTCCATGTACCTGTGATGCCCACAGAAGAACCCGCTTGGCCTCGATTAACGTCCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 72 bp CTGGGCAAACCACCTTGGCGACTCTGGAGGAAGCACTaGAAATCTTGTTCATGTCGGTGTCCTGGAGGTCCT +
Preference number: 6 (lower is better)
Translates to: LGKPPWRLWRKH*KSCSCRCPGGP
Trigger: AGGACCTCCAGGACACCGACATGAACAAGATTTCCAGTGCTTCCTCCAGAGTCGCCAAGGTGGTTTGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 72 bp AATGAGATGTCGCCTCACCTCTGGGTGATCCACCACTaGCAGGTGAACCAAGATGGCACCCAGTATCTCAGC +
Preference number: 6 (lower is better)
Translates to: NEMSPHLWVIHH*QVNQDGTQYLS
Trigger: GCTGAGATACTGGGTGCCATCTTGGTTCACCTGCCAGTGGTGGATCACCCAGAGGTGAGGCGACATCTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 72 bp TCTGCATGTAGTTCTCCATGTTCTGCATGCACAGCCTaGCCATCAGGCTCACTCCCTCAAGGAAGGTGCCTC +
Preference number: 6 (lower is better)
Translates to: SACSSPCSACTA*PSGSLPQGRCL
Trigger: GAGGCACCTTCCTTGAGGGAGTGAGCCTGATGGCCAGGCTGTGCATGCAGAACATGGAGAACTACATGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 72 bp TTAGGCAGGAGAAGGCTCAGCATGGGCCTGAGAGACTaGATGACTCCCAGTTTCACCTCAAGGTCCTGGTGG +
Preference number: 6 (lower is better)
Translates to: LGRRRLSMGLRD*MTPSFTSRSWW
Trigger: CCACCAGGACCTTGAGGTGAAACTGGGAGTCATCAAGTCTCTCAGGCCCATGCTGAGCCTTCTCCTGCCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 90 bp CTCTGTGATATCCCGCATCTGCTTGGAGGCAATGGCCACCAGCCTTaGTATACAGTGCTCCTCCATCTCCCCTTCCTGCTGGATGATCTC +
Preference number: 6 (lower is better)
Translates to: LCDIPHLLGGNGHQP*YTVLLHLPFLLDDL
Trigger: GAGATCATCCAGCAGGAAGGGGAGATGGAGGAGCACTGTATACAAAGGCTGGTGGCCATTGCCTCCAAGCAGATGCGGGATATCACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 90 bp CTTGCTCTTTCCAGCTATTCCAGCCTCCGTGTCTTTGCCATGAATTaGGTTCTCGGCCAGGTTCGTGAGGCTGATGCAGATGGGGGTCAG +
Preference number: 6 (lower is better)
Translates to: LALSSYSSLRVFAMN*VLGQVREADADGGQ
Trigger: CTGACCCCCATCTGCATCAGCCTCACGAACCTGGCCGAGAACCAAATTCATGGCAAAGACACGGAGGCTGGAATAGCTGGAAAGAGCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 72 bp CCACACGGACAGCCTCTTTGCTCATCTCCACCTGGCTaGAGAAGAACTTCATCAGTTCCTTGGGGTAGGAGC +
Preference number: 6 (lower is better)
Translates to: PHGQPLCSSPPG*RRTSSVPWGRS
Trigger: GCTCCTACCCCAAGGAACTGATGAAGTTCTTCTTCAGCCAGGTGGAGATGAGCAAAGAGGCTGTCCGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 72 bp GAGGGCCATGGCTTTCTCCCGTTCCCACTCTTTCTCTaGCAAGATCCACTTCTCCAGGAGATGCACAGTGTC +
Preference number: 6 (lower is better)
Translates to: EGHGFLPFPLFL*QDPLLQEMHSV
Trigger: GACACTGTGCATCTCCTGGAGAAGTGGATCTTGTCAGAGAAAGAGTGGGAACGGGAGAAAGCCATGGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 72 bp GGGTTCTTCTGTGGGCATCACAGGTACATGGAGCGATaGGTCCAACCAGTACTCCAAACTGCCCCAGCTTCA +
Preference number: 6 (lower is better)
Translates to: GFFCGHHRYMER*VQPVLQTAPAS
Trigger: TGAAGCTGGGGCAGTTTGGAGTACTGGTTGGACTCATCGCTCCATGTACCTGTGATGCCCACAGAAGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 72 bp GTGTCCTGGAGGTCCTCCTTACATTTCTGCAGCTCCTaGTCCTTGGAAGTTCCCCATAAAGAGCACGTCTGG +
Preference number: 6 (lower is better)
Translates to: VSWRSSLHFCSS*SLEVPHKEHVW
Trigger: CCAGACGTGCTCTTTATGGGGAACTTCCAAGGAGCAGGAGCTGCAGAAATGTAAGGAGGACCTCCAGGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 72 bp GACTTGATGACTCCCAGTTTCACCTCAAGGTCCTGGTaGCGCAGCCACACGGTCACGAAGTATCGGTACATT +
Preference number: 6 (lower is better)
Translates to: DLMTPSFTSRSW*RSHTVTKYRYI
Trigger: AATGTACCGATACTTCGTGACCGTGTGGCTGCGCCACCAGGACCTTGAGGTGAAACTGGGAGTCATCAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 72 bp CTGGATGAGAGAGACAACCTCGTCGCAGTTAAACTCTaGGCAAACCACCTTGGCGACTCTGGAGGAAGCACT +
Preference number: 6 (lower is better)
Translates to: LDERDNLVAVKL*ANHLGDSGGST
Trigger: AGTGCTTCCTCCAGAGTCGCCAAGGTGGTTTGCCCAGAGTTTAACTGCGACGAGGTTGTCTCTCTCATCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 90 bp AACGTCTCCATGGCACTACAGATCACCTGGCGCATCTTGGCTTCGTaGGCAAGTCTCAACATCGTGAATATGGTAGCCAGGGTGATGCCC +
Preference number: 6 (lower is better)
Translates to: NVSMALQITWRILAS*ASLNIVNMVARVMP
Trigger: GGGCATCACCCTGGCTACCATATTCACGATGTTGAGACTTGCCAACGAAGCCAAGATGCGCCAGGTGATCTGTAGTGCCATGGAGACGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 90 bp TCTGGGCAAACCACCTTGGCGACTCTGGAGGAAGCACTGGAAATCTaGTTCATGTCGGTGTCCTGGAGGTCCTCCTTACATTTCTGCAGC +
Preference number: 6 (lower is better)
Translates to: SGQTTLATLEEALEI*FMSVSWRSSLHFCS
Trigger: GCTGCAGAAATGTAAGGAGGACCTCCAGGACACCGACATGAACAAGATTTCCAGTGCTTCCTCCAGAGTCGCCAAGGTGGTTTGCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 72 bp TCTTTTCCTGGAAGCCTGACAGAACCAGCTGGCCAATaGTTCGCAGAATTGCCATCCGTACCTTGGACCGAG +
Preference number: 6 (lower is better)
Translates to: SFPGSLTEPAGQ*FAELPSVPWTE
Trigger: CTCGGTCCAAGGTACGGATGGCAATTCTGCGAATCATTGGCCAGCTGGTTCTGTCAGGCTTCCAGGAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 72 bp GTCTCAAAATCCTCCGCCTCTGTGATATCCCGCATCTaGTTGGAGGCAATGGCCACCAGCCTTTGTATACAG +
Preference number: 6 (lower is better)
Translates to: VSKSSASVISRI*LEAMATSLCIQ
Trigger: CTGTATACAAAGGCTGGTGGCCATTGCCTCCAAGCAGATGCGGGATATCACAGAGGCGGAGGATTTTGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 72 bp GTCTCACAGAACGTCTCCATGGCACTACAGATCACCTaGCGCATCTTGGCTTCGTTGGCAAGTCTCAACATC +
Preference number: 6 (lower is better)
Translates to: VSQNVSMALQIT*RILASLASLNI
Trigger: GATGTTGAGACTTGCCAACGAAGCCAAGATGCGCCAGGTGATCTGTAGTGCCATGGAGACGTTCTGTGAGAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 72 bp AAGTATCGGTACATTGGGAAGAGCTTCACAGCAAACTaGTCCTCCGTCATCACGGGATACAGGCTGTCCTCC +
Preference number: 6 (lower is better)
Translates to: KYRYIGKSFTAN*SSVITGYRLSS
Trigger: GGAGGACAGCCTGTATCCCGTGATGACGGAGGACCAGTTTGCTGTGAAGCTCTTCCCAATGTACCGATACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 72 bp TGGTTCCAGGTAAACTCAGTGTGCTCTTCCAGGTACTaGACTAGCAGAGGGATCTCCTGCTCCCACATGTCA +
Preference number: 6 (lower is better)
Translates to: WFQVNSVCSSRY*TSRGISCSHMS
Trigger: TGACATGTGGGAGCAGGAGATCCCTCTGCTAGTCCAGTACCTGGAAGAGCACACTGAGTTTACCTGGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 72 bp GAGGAAGCACTGGAAATCTTGTTCATGTCGGTGTCCTaGAGGTCCTCCTTACATTTCTGCAGCTCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: EEALEILFMSVS*RSSLHFCSSCS
Trigger: GGAGCAGGAGCTGCAGAAATGTAAGGAGGACCTCCAGGACACCGACATGAACAAGATTTCCAGTGCTTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 72 bp TCAAAATCCTCCGCCTCTGTGATATCCCGCATCTGCTaGGAGGCAATGGCCACCAGCCTTTGTATACAGTGC +
Preference number: 6 (lower is better)
Translates to: SKSSASVISRIC*EAMATSLCIQC
Trigger: GCACTGTATACAAAGGCTGGTGGCCATTGCCTCCAAGCAGATGCGGGATATCACAGAGGCGGAGGATTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 72 bp AGCTGGCCAATGATTCGCAGAATTGCCATCCGTACCTaGGACCGAGTGTCAGAGAGAGTGTTCTTGACGACG +
Preference number: 6 (lower is better)
Translates to: SWPMIRRIAIRT*DRVSERVFLTT
Trigger: CGTCGTCAAGAACACTCTCTCTGACACTCGGTCCAAGGTACGGATGGCAATTCTGCGAATCATTGGCCAGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 72 bp TCCAGCTATTCCAGCCTCCGTGTCTTTGCCATGAATTaGGTTCTCGGCCAGGTTCGTGAGGCTGATGCAGAT +
Preference number: 6 (lower is better)
Translates to: SSYSSLRVFAMN*VLGQVREADAD
Trigger: ATCTGCATCAGCCTCACGAACCTGGCCGAGAACCAAATTCATGGCAAAGACACGGAGGCTGGAATAGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 72 bp CTGCCCCAGCTTCAGCGGGATACAGACACCAATACTTaGAACGTAGATCTGCATGAGATGGAGATGGAGGGC +
Preference number: 6 (lower is better)
Translates to: LPQLQRDTDTNT*NVDLHEMEMEG
Trigger: GCCCTCCATCTCCATCTCATGCAGATCTACGTTCAAAGTATTGGTGTCTGTATCCCGCTGAAGCTGGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 72 bp ACCACCTTGGCGACTCTGGAGGAAGCACTGGAAATCTaGTTCATGTCGGTGTCCTGGAGGTCCTCCTTACAT +
Preference number: 6 (lower is better)
Translates to: TTLATLEEALEI*FMSVSWRSSLH
Trigger: ATGTAAGGAGGACCTCCAGGACACCGACATGAACAAGATTTCCAGTGCTTCCTCCAGAGTCGCCAAGGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 90 bp GTCTCACAGAACGTCTCCATGGCACTACAGATCACCTGGCGCATCTaGGCTTCGTTGGCAAGTCTCAACATCGTGAATATGGTAGCCAGG +
Preference number: 6 (lower is better)
Translates to: VSQNVSMALQITWRI*ASLASLNIVNMVAR
Trigger: CCTGGCTACCATATTCACGATGTTGAGACTTGCCAACGAAGCCAAGATGCGCCAGGTGATCTGTAGTGCCATGGAGACGTTCTGTGAGAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 90 bp TGGGCAAACTGGAAGTCCTCTGGGTCTTGGATGCTTTTGATGGCGTaGGTGACCTGCACAACACTCTTCATGAAGGCCATTTTGAGGCTG +
Preference number: 6 (lower is better)
Translates to: WANWKSSGSWMLLMA*VTCTTLFMKAILRL
Trigger: CAGCCTCAAAATGGCCTTCATGAAGAGTGTTGTGCAGGTCACCAACGCCATCAAAAGCATCCAAGACCCAGAGGACTTCCAGTTTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 72 bp GTGGTAACCGATGCTTCTAGAATCTGCCTCAAGACCTaGAGAAGGGATGGGAATAAAGGCCAATGCCCGGTA +
Preference number: 6 (lower is better)
Translates to: VVTDASRICLKT*RRDGNKGQCPV
Trigger: TACCGGGCATTGGCCTTTATTCCCATCCCTTCTGCAGGTCTTGAGGCAGATTCTAGAAGCATCGGTTACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061013.13
CDS GCA 72 bp CAGGTAGATGGTCTTGATATTAATTTTGGGGTCATCTaGGCTCACTACTGCCCTGATCAGGGCCAGTGTCCC +
Preference number: 6 (lower is better)
Translates to: QVDGLDINFGVI*AHYCPDQGQCP
Trigger: GGGACACTGGCCCTGATCAGGGCAGTAGTGAGCGCAGATGACCCCAAAATTAATATCAAGACCATCTACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 72 bp TGCCATCGACCTCACGGGAGAAACCAAGTGGTCAGGTaGTTCTGCTTTGATGATCACAACTATGAGGCCAGT +
Preference number: 6 (lower is better)
Translates to: CHRPHGRNQVVR*FCFDDHNYEAS
Trigger: ACTGGCCTCATAGTTGTGATCATCAAAGCAGAACCACCTGACCACTTGGTTTCTCCCGTGAGGTCGATGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 72 bp TGCAGGTCCATGGCCCCAATGTTCTCACAGAGCTTCTaGATGAGAGAGACAACCTCGTCGCAGTTAAACTCT +
Preference number: 6 (lower is better)
Translates to: CRSMAPMFSQSF*MRETTSSQLNS
Trigger: AGAGTTTAACTGCGACGAGGTTGTCTCTCTCATCCAGAAGCTCTGTGAGAACATTGGGGCCATGGACCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 72 bp AATTTGTCATCCTGGTCCATCTTTTCCATGAGGAGCTaGATGGTACACAGCGTCATCAGAGGGTCCACAGCG +
Preference number: 6 (lower is better)
Translates to: NLSSWSIFSMRS*MVHSVIRGSTA
Trigger: CGCTGTGGACCCTCTGATGACGCTGTGTACCATCCAGCTCCTCATGGAAAAGATGGACCAGGATGACAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 72 bp ATGGCACTACAGATCACCTGGCGCATCTTGGCTTCGTaGGCAAGTCTCAACATCGTGAATATGGTAGCCAGG +
Preference number: 6 (lower is better)
Translates to: MALQITWRILAS*ASLNIVNMVAR
Trigger: CCTGGCTACCATATTCACGATGTTGAGACTTGCCAACGAAGCCAAGATGCGCCAGGTGATCTGTAGTGCCAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 72 bp TGGAGGTCCTCCTTACATTTCTGCAGCTCCTGCTCCTaGGAAGTTCCCCATAAAGAGCACGTCTGGCTTACA +
Preference number: 6 (lower is better)
Translates to: WRSSLHFCSSCS*EVPHKEHVWLT
Trigger: TGTAAGCCAGACGTGCTCTTTATGGGGAACTTCCAAGGAGCAGGAGCTGCAGAAATGTAAGGAGGACCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 72 bp TCCAAGGCCTGCTCCAGGGGCTCTCTGTTGATCCTCTaGACCAAAAGCTGCATGGATTTGATAGTGATCCTG +
Preference number: 6 (lower is better)
Translates to: SKACSRGSLLIL*TKSCMDLIVIL
Trigger: CAGGATCACTATCAAATCCATGCAGCTTTTGGTCAAGAGGATCAACAGAGAGCCCCTGGAGCAGGCCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061013.13
CDS CAA 72 bp TCCAAGGCCTGCTCCAGGGGCTCTCTGTTGATCCTCTaGACCAAAAGCTGCATGGATTTGATAGTGATCCTC +
Preference number: 6 (lower is better)
Translates to: SKACSRGSLLIL*TKSCMDLIVIL
Trigger: GAGGATCACTATCAAATCCATGCAGCTTTTGGTCAAGAGGATCAACAGAGAGCCCCTGGAGCAGGCCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113130.8
CDS CAA 90 bp TACTCCAAACTGCCCCAGCTTCAGCGGGATACAGACACCAATACTTaGAACGTAGATCTGCATGAGATGGAGATGGAGGGCCATGGCTTT +
Preference number: 6 (lower is better)
Translates to: YSKLPQLQRDTDTNT*NVDLHEMEMEGHGF
Trigger: AAAGCCATGGCCCTCCATCTCCATCTCATGCAGATCTACGTTCAAAGTATTGGTGTCTGTATCCCGCTGAAGCTGGGGCAGTTTGGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 72 bp GGTCTGGAAATTTGTCATCCTGGTCCATCTTTTCCATaGGGAGCTGGATGGTACACAGCGTCATCAGAGGGT +
Preference number: 6 (lower is better)
Translates to: GLEICHPGPSFP*GAGWYTASSEG
Trigger: ACCCTCTGATGACGCTGTGTACCATCCAGCTCCTCATGGAAAAGATGGACCAGGATGACAAATTTCCAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 72 bp ATGTTCATTTTGCGTTGGGTAGAAATCTCTGGCATCTaGAGGCAGCGGATGAGCGCGTTCATCACTACACAG +
Preference number: 6 (lower is better)
Translates to: MFILRWVEISGI*RQRMSAFITTQ
Trigger: CTGTGTAGTGATGAACGCGCTCATCCGCTGCCTGCAGATGCCAGAGATTTCTACCCAACGCAAAATGAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 72 bp TCTGGGTCTTGGATGCTTTTGATGGCGTTGGTGACCTaGACAACACTCTTCATGAAGGCCATTTTGAGGCTG +
Preference number: 6 (lower is better)
Translates to: SGSWMLLMALVT*TTLFMKAILRL
Trigger: CAGCCTCAAAATGGCCTTCATGAAGAGTGTTGTGCAGGTCACCAACGCCATCAAAAGCATCCAAGACCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 72 bp CTGTGCTTTCCTCTGGAGAGTAGAAAGGCTTCATCGTaGTTAGTTGTGAGAGAGCATCCATTGCCATCGACC +
Preference number: 6 (lower is better)
Translates to: LCFPLESRKASS*LVVREHPLPST
Trigger: GGTCGATGGCAATGGATGCTCTCTCACAACTAAGCACGATGAAGCCTTTCTACTCTCCAGAGGAAAGCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 72 bp TCCAGGGGCTCTCTGTTGATCCTCTTGACCAAAAGCTaGATGGATTTGATAGTGATCCTGGACCTTGAGCAC +
Preference number: 6 (lower is better)
Translates to: SRGSLLILLTKS*MDLIVILDLEH
Trigger: GTGCTCAAGGTCCAGGATCACTATCAAATCCATGCAGCTTTTGGTCAAGAGGATCAACAGAGAGCCCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061013.13
CDS GCA 72 bp TCCAGGGGCTCTCTGTTGATCCTCTTGACCAAAAGCTaGATGGATTTGATAGTGATCCTCTGCAGGGTCATC +
Preference number: 6 (lower is better)
Translates to: SRGSLLILLTKS*MDLIVILCRVI
Trigger: GATGACCCTGCAGAGGATCACTATCAAATCCATGCAGCTTTTGGTCAAGAGGATCAACAGAGAGCCCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113130.8
CDS CCA 72 bp GTTGTAGATGTTCATTTTGCGTTGGGTAGAAATCTCTaGCATCTGCAGGCAGCGGATGAGCGCGTTCATCAC +
Preference number: 6 (lower is better)
Translates to: VVDVHFALGRNL*HLQAADERVHH
Trigger: GTGATGAACGCGCTCATCCGCTGCCTGCAGATGCCAGAGATTTCTACCCAACGCAAAATGAACATCTACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 72 bp AGTAAGAGCAGATTTGTGGGCAAACTGGAAGTCCTCTaGGTCTTGGATGCTTTTGATGGCGTTGGTGACCTG +
Preference number: 6 (lower is better)
Translates to: SKSRFVGKLEVL*VLDAFDGVGDL
Trigger: CAGGTCACCAACGCCATCAAAAGCATCCAAGACCCAGAGGACTTCCAGTTTGCCCACAAATCTGCTCTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 72 bp AACGTCTCCATGGCACTACAGATCACCTGGCGCATCTaGGCTTCGTTGGCAAGTCTCAACATCGTGAATATG +
Preference number: 6 (lower is better)
Translates to: NVSMALQITWRI*ASLASLNIVNM
Trigger: CATATTCACGATGTTGAGACTTGCCAACGAAGCCAAGATGCGCCAGGTGATCTGTAGTGCCATGGAGACGTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 72 bp CTCATGGTATTTGCATACAGGGTCTTAACAGACTCATaGTCTTCCCCTGGGGGTTGGAGGGAGATAACGGTG +
Preference number: 6 (lower is better)
Translates to: LMVFAYRVLTDS*SSPGGWREITV
Trigger: CACCGTTATCTCCCTCCAACCCCCAGGGGAAGACAATGAGTCTGTTAAGACCCTGTATGCAAATACCATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 90 bp TGCAGCAGGAAGGTATACAGCAGGTCAGGAAACAGGTCTGGAAATTaGTCATCCTGGTCCATCTTTTCCATGAGGAGCTGGATGGTACAC +
Preference number: 6 (lower is better)
Translates to: CSRKVYSRSGNRSGN*SSWSIFSMRSWMVH
Trigger: GTGTACCATCCAGCTCCTCATGGAAAAGATGGACCAGGATGACAAATTTCCAGACCTGTTTCCTGACCTGCTGTATACCTTCCTGCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 72 bp AAAACTGTCATCTGTTCATTGATGCTGTCGTTACTGTaGCCAAAGGAACTCTCCAGGGACTTCCAGCCCCAG +
Preference number: 6 (lower is better)
Translates to: KTVICSLMLSLL*PKELSRDFQPQ
Trigger: CTGGGGCTGGAAGTCCCTGGAGAGTTCCTTTGGTCACAGTAACGACAGCATCAATGAACAGATGACAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
ENSMUST00000135948.2
CDS GCA 72 bp CAGCGTCTGAGTCTAGCTGCAGGTCCTGGAGAGAATTaGGAAGTCCCACAAGGTCCATCTTTTTCAGATAAT +
Preference number: 6 (lower is better)
Translates to: QRLSLAAGPGEN*EVPQGPSFSDN
Trigger: ATTATCTGAAAAAGATGGACCTTGTGGGACTTCGCAATTCTCTCCAGGACCTGCAGCTAGACTCAGACGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
ENSMUST00000135948.2
CDS CCA 72 bp AGCAGGTCAGGAAACAGGTCTGGAAATTTGTCATCCTaGTCCATCTTTTCCATGAGGAGCTGGATGGTACAC +
Preference number: 6 (lower is better)
Translates to: SRSGNRSGNLSS*SIFSMRSWMVH
Trigger: GTGTACCATCCAGCTCCTCATGGAAAAGATGGACCAGGATGACAAATTTCCAGACCTGTTTCCTGACCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 90 bp GTAGATAAGGTGAGCTGGACAGACACATATTTCAGACCCCAGCCTTaGATCTTTTCCTGGAAGCCTGACAGAACCAGCTGGCCAATGATT +
Preference number: 6 (lower is better)
Translates to: VDKVSWTDTYFRPQP*IFSWKPDRTSWPMI
Trigger: AATCATTGGCCAGCTGGTTCTGTCAGGCTTCCAGGAAAAGATCAAAGGCTGGGGTCTGAAATATGTGTCTGTCCAGCTCACCTTATCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 90 bp TTTAGGGAACTCATGGTATTTGCATACAGGGTCTTAACAGACTCATaGTCTTCCCCTGGGGGTTGGAGGGAGATAACGGTGTGTATGCTG +
Preference number: 6 (lower is better)
Translates to: FRELMVFAYRVLTDS*SSPGGWREITVCML
Trigger: CAGCATACACACCGTTATCTCCCTCCAACCCCCAGGGGAAGACAATGAGTCTGTTAAGACCCTGTATGCAAATACCATGAGTTCCCTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 90 bp ATTTGCATACAGGGTCTTAACAGACTCATTGTCTTCCCCTGGGGGTaGGAGGGAGATAACGGTGTGTATGCTGATATCCATCAACTCTGT +
Preference number: 6 (lower is better)
Translates to: ICIQGLNRLIVFPWG*EGDNGVYADIHQLC
Trigger: ACAGAGTTGATGGATATCAGCATACACACCGTTATCTCCCTCCAACCCCCAGGGGAAGACAATGAGTCTGTTAAGACCCTGTATGCAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 90 bp TTCCCAAAGAGAACAAAGGCCTTCAACCGTAGCAGCTCGCTTTCGTaGTCGAAGAAAGCTCTGCACTGCTTAGAGATGGCTTCAAAAGAA +
Preference number: 6 (lower is better)
Translates to: FPKRTKAFNRSSSLS*SKKALHCLEMASKE
Trigger: TTCTTTTGAAGCCATCTCTAAGCAGTGCAGAGCTTTCTTCGACAACGAAAGCGAGCTGCTACGGTTGAAGGCCTTTGTTCTCTTTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 72 bp ATGACAAACTCGTCAGTGAGGTTGAGAGGCTTGAGATaGTGCTGCAGTTCATACATGACCAAGCTGAAGTGG +
Preference number: 6 (lower is better)
Translates to: MTNSSVRLRGLR*CCSSYMTKLKW
Trigger: CCACTTCAGCTTGGTCATGTATGAACTGCAGCATCATCTCAAGCCTCTCAACCTCACTGACGAGTTTGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 72 bp TTGGAAGTTCCCCATAAAGAGCACGTCTGGCTTACATaGAGATCTAGCAGACTGGACAGGACGTTAATCGAG +
Preference number: 6 (lower is better)
Translates to: LEVPHKEHVWLT*RSSRLDRTLIE
Trigger: CTCGATTAACGTCCTGTCCAGTCTGCTAGATCTTCATGTAAGCCAGACGTGCTCTTTATGGGGAACTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS GCA 72 bp AGCAGCTCGCTTTCGTTGTCGAAGAAAGCTCTGCACTaGTTAGAGATGGCTTCAAAAGAAGACCCTATATCG +
Preference number: 6 (lower is better)
Translates to: SSSLSLSKKALH*LEMASKEDPIS
Trigger: CGATATAGGGTCTTCTTTTGAAGCCATCTCTAAGCAGTGCAGAGCTTTCTTCGACAACGAAAGCGAGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CCA 72 bp CAGCAGGAAGGTATACAGCAGGTCAGGAAACAGGTCTaGAAATTTGTCATCCTGGTCCATCTTTTCCATGAG +
Preference number: 6 (lower is better)
Translates to: QQEGIQQVRKQV*KFVILVHLFHE
Trigger: CTCATGGAAAAGATGGACCAGGATGACAAATTTCCAGACCTGTTTCCTGACCTGCTGTATACCTTCCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 72 bp GATCTCCTGCATGATGTTGTAGATGTTCATTTTGCGTaGGGTAGAAATCTCTGGCATCTGCAGGCAGCGGAT +
Preference number: 6 (lower is better)
Translates to: DLLHDVVDVHFA*GRNLWHLQAAD
Trigger: ATCCGCTGCCTGCAGATGCCAGAGATTTCTACCCAACGCAAAATGAACATCTACAACATCATGCAGGAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS TCA 72 bp GGCTTTTTCTGGGCCAGGACGGAGCACATGTTTGTCTaGAAAACTGTCATCTGTTCATTGATGCTGTCGTTA +
Preference number: 6 (lower is better)
Translates to: GFFWARTEHMFV*KTVICSLMLSL
Trigger: TAACGACAGCATCAATGAACAGATGACAGTTTTTCAGACAAACATGTGCTCCGTCCTGGCCCAGAAAAAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
CDS CAA 72 bp TGGGCAGACAGCTGCTTCATAATAATTCCCGCCAAGTaGCAGGCAGCAATTCTGATCCTTGACAGATTGTTT +
Preference number: 6 (lower is better)
Translates to: WADSCFIIIPAK*QAAILILDRLF
Trigger: AAACAATCTGTCAAGGATCAGAATTGCTGCCTGCAACTTGGCGGGAATTATTATGAAGCAGCTGTCTGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000061013.13
ENSMUST00000113130.8
ENSMUST00000135948.2
CDS TCA 72 bp ACAGCAGGCTTTTTCTGGGCGGAGCACATGTTTGTCTaGAAAACTGTCATCTGTTCATTGATGCTGTCGTTA +
Preference number: 6 (lower is better)
Translates to: TAGFFWAEHMFV*KTVICSLMLSL
Trigger: TAACGACAGCATCAATGAACAGATGACAGTTTTTCAGACAAACATGTGCTCCGCCCAGAAAAAGCCTGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000135948.2