Pregenerated sensors for MRO (Mus musculus)
Ensembl gene IDs: ENSMUSG00000064036Ensembl transcript IDs: ENSMUST00000119239.8, ENSMUST00000120033.8, ENSMUST00000134847.2, ENSMUST00000179472.8
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGAGAGAGAGAGAGGGAGGGAGAGGGAGAGGGAGAGAGAGAGACTaGGCCTTGCTTGGGCTTTTGAAGTCTCTAATTCCAACTCTACTG | + |
|
Preference number: 1 (lower is better) Translates to: EREREGGRGRGRERD*ALLGLLKSLIPTLL Trigger: CAGTAGAGTTGGAATTAGAGACTTCAAAAGCCCAAGCAAGGCCCAGTCTCTCTCTCTCCCTCTCCCTCTCCCTCCCTCTCTCTCTCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179472.8 |
||
| 3UTR GCA 90 bp | AGGTGGATGGTGACTGAAGGACAGTATGTGACCTCCACAACCATGTaGATATATGTGTGCACGCGAGTGCATAGAGTTTTACTTCAGGGG | + |
|
Preference number: 1 (lower is better) Translates to: RWMVTEGQYVTSTTM*IYVCTRVHRVLLQG Trigger: CCCCTGAAGTAAAACTCTATGCACTCGCGTGCACACATATATGCACATGGTTGTGGAGGTCACATACTGTCCTTCAGTCACCATCCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| 3UTR CCA 90 bp | TCAGCAAGCTCCAAGCCAGTTAAAGATCCTGTTTCAATGGAAAGGTaGATGGTGACTGAAGGACAGTATGTGACCTCCACAACCATGTGC | + |
|
Preference number: 1 (lower is better) Translates to: SASSKPVKDPVSMER*MVTEGQYVTSTTMC Trigger: GCACATGGTTGTGGAGGTCACATACTGTCCTTCAGTCACCATCCACCTTTCCATTGAAACAGGATCTTTAACTGGCTTGGAGCTTGCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| 3UTR GCA 90 bp | ACTGAAGGACAGTATGTGACCTCCACAACCATGTGCATATATGTGTaGACGCGAGTGCATAGAGTTTTACTTCAGGGGCAGAGATATACT | + |
|
Preference number: 1 (lower is better) Translates to: TEGQYVTSTTMCIYV*TRVHRVLLQGQRYT Trigger: AGTATATCTCTGCCCCTGAAGTAAAACTCTATGCACTCGCGTGCACACATATATGCACATGGTTGTGGAGGTCACATACTGTCCTTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| 3UTR CAA 90 bp | GAGAGAGAGGGAGGGAGAGGGAGAGGGAGAGAGAGAGACTGGGCCTaGCTTGGGCTTTTGAAGTCTCTAATTCCAACTCTACTGAAATAC | + |
|
Preference number: 2 (lower is better) Translates to: EREGGRGRGRERDWA*LGLLKSLIPTLLKY Trigger: GTATTTCAGTAGAGTTGGAATTAGAGACTTCAAAAGCCCAAGCAAGGCCCAGTCTCTCTCTCTCCCTCTCCCTCTCCCTCCCTCTCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179472.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTTTAAGGACGTGTGCATTTATTGGGCTGGGGAGATGGCCTAGTCAGTACAAGGACAGGGCACTCACATaGGCCACTTTCTCTGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: VLRTCAFIGLGRWPSQYKDRALT*ATFSAA Trigger: AGCAGCAGAGAAAGTGGCCCATGTGAGTGCCCTGTC...CTTGTACTGACTAGGCCATCTCCCCAGCCCAATAAATGCACACGTCCTTAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCATCATGGCAGGAGTAGGCAGGCATGGTGCTAAAGCACTAATTGAGAGCTTTACAGAGGAAGCACCATaGCTGGACAGGGCACTCACA | + |
|
Preference number: 2 (lower is better) Translates to: IIMAGVGRHGAKALIESFTEEAP*LDRALT Trigger: TGTGAGTGCCCTGTCCAGGCATGGTGCTTCCTCTGT...AAAGCTCTCAATTAGTGCTTTAGCACCATGCCTGCCTACTCCTGCCATGATGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179472.8 |
||
| 3UTR CAA 90 bp | GGGAGAGGGAGAGGGAGAGAGAGAGACTGGGCCTTGCTTGGGCTTTaGAAGTCTCTAATTCCAACTCTACTGAAATACCTTCTCCAACAA | + |
|
Preference number: 2 (lower is better) Translates to: GRGRGRERDWALLGL*KSLIPTLLKYLLQQ Trigger: TTGTTGGAGAAGGTATTTCAGTAGAGTTGGAATTAGAGACTTCAAAAGCCCAAGCAAGGCCCAGTCTCTCTCTCTCCCTCTCCCTCTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179472.8 |
||
| 3UTR-3UTR TCA 90 bp | CATCATCCTGTAGACGGTGTAGAGCTTCAGCAACATTTCTTCTCATTCTTTTTAGTAGGTGGAGGGGCCTaGATTCGGCTCTCAGAACCC | + |
|
Preference number: 2 (lower is better) Translates to: HHPVDGVELQQHFFSFFLVGGGA*IRLSEP Trigger: GGGTTCTGAGAGCCGAATTCAGGCCCCTCCACCTAC...TAAAAAGAATGAGAAGAAATGTTGCTGAAGCTCTACACCGTCTACAGGATGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTAATCAGCAAGCTCCAAGCCAGTTAAAGATCCTGTTTCAATGGAAAGGTGGAGACAGGGCACTCACATaGGCCACTTTCTCTGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: SNQQAPSQLKILFQWKGGDRALT*ATFSAA Trigger: AGCAGCAGAGAAAGTGGCCCATGTGAGTGCCCTGTC...TCCACCTTTCCATTGAAACAGGATCTTTAACTGGCTTGGAGCTTGCTGATTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGATGGTGACTGAAGGACAGTATGTGACCTCCACAACCATGTGCATATATGTGCCCTCAGTTGCTCTCTaGCATCCTCTTTTCCATAAC | + |
|
Preference number: 2 (lower is better) Translates to: WMVTEGQYVTSTTMCIYVPSVAL*HPLFHN Trigger: GTTATGGAAAAGAGGATGTCAGAGAGCAACTGAGGG...CACATATATGCACATGGTTGTGGAGGTCACATACTGTCCTTCAGTCACCATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| 3UTR-3UTR TCA 90 bp | CATCAGATATTAAAAGACAATGTTGTAAGCCAGCTTCTTGGTATCTTGGTTGGTGTAGGTGGAGGGGCCTaGATTCGGCTCTCAGAACCC | + |
|
Preference number: 2 (lower is better) Translates to: HQILKDNVVSQLLGILVGVGGGA*IRLSEP Trigger: GGGTTCTGAGAGCCGAATTCAGGCCCCTCCACCTAC...ACCAACCAAGATACCAAGAAGCTGGCTTACAACATTGTCTTTTAATATCTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| 3UTR-3UTR TCA 90 bp | ATCATGGCAGGAGTAGGCAGGCATGGTGCTAAAGCACTAATTGAGAGCTTTACACTGACAGAGAGGAACTaGGAAAGGAGCTTTTGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: IMAGVGRHGAKALIESFTLTERN*ERSFWN Trigger: GTTCCAAAAGCTCCTTTCTCAGTTCCTCTCTGTCAG...TGTAAAGCTCTCAATTAGTGCTTTAGCACCATGCCTGCCTACTCCTGCCATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179472.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAAGCTCCAAGCCAGTTAAAGATCCTGTTTCAATGGAAAGGTGGATGGTGACTACCTCCACAACCATGTaGATATATGTGTGCACGCGA | + |
|
Preference number: 2 (lower is better) Translates to: ASSKPVKDPVSMERWMVTTSTTM*IYVCTR Trigger: TCGCGTGCACACATATATGCACATGGTTGTGGAGGT...AGTCACCATCCACCTTTCCATTGAAACAGGATCTTTAACTGGCTTGGAGCTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| 3UTR-3UTR CCA 90 bp | CATCATCCTGTAGACGGTGTAGAGCTTCAGCAACATTTCTTCTCATTCTTTTTAAGGAAGCACCATGCCTaGACAGGGCACTCACATGGG | + |
|
Preference number: 2 (lower is better) Translates to: HHPVDGVELQQHFFSFFLRKHHA*TGHSHG Trigger: CCCATGTGAGTGCCCTGTCCAGGCATGGTGCTTCCT...TAAAAAGAATGAGAAGAAATGTTGCTGAAGCTCTACACCGTCTACAGGATGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTTTAAGGACGTGTGCATTTATTGGGCTGGGGAGATGGCCTAGTCAGTACAAGCAAAAAGGTATCCTATaGGACCAAACAGAGGAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: VLRTCAFIGLGRWPSQYKQKGIL*DQTEEA Trigger: TGCTTCCTCTGTTTGGTCTCATAGGATACCTTTTTG...CTTGTACTGACTAGGCCATCTCCCCAGCCCAATAAATGCACACGTCCTTAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTATCATCATGGCAGGAGTAGGCAGGCATGGTGCTAAAGCACTAATTGAGAGCGTTTCAATGGAAAGGTaGATGGTGACTGAAGGACAG | + |
|
Preference number: 2 (lower is better) Translates to: IIIMAGVGRHGAKALIESVSMER*MVTEGQ Trigger: CTGTCCTTCAGTCACCATCCACCTTTCCATTGAAAC...GCTCTCAATTAGTGCTTTAGCACCATGCCTGCCTACTCCTGCCATGATGATAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179472.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCATCATGGCAGGAGTAGGCAGGCATGGTGCTAAAGCACTAATTGAGAGCTTTAGACTGGGCCTTGCTTaGGCTTTTGAAGTCTCTAAT | + |
|
Preference number: 2 (lower is better) Translates to: IIMAGVGRHGAKALIESFRLGLA*AFEVSN Trigger: ATTAGAGACTTCAAAAGCCCAAGCAAGGCCCAGTCT...AAAGCTCTCAATTAGTGCTTTAGCACCATGCCTGCCTACTCCTGCCATGATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179472.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCATGGCAGGAGTAGGCAGGCATGGTGCTAAAGCACTAATTGAGAGCTTTACAATGTGCATATATGTGTaGACGCGAGTGCATAGAGTT | + |
|
Preference number: 2 (lower is better) Translates to: IMAGVGRHGAKALIESFTMCIYV*TRVHRV Trigger: AACTCTATGCACTCGCGTGCACACATATATGCACAT...TGTAAAGCTCTCAATTAGTGCTTTAGCACCATGCCTGCCTACTCCTGCCATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179472.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGCTTTTGAAGTCTCTAATTCCAACTCTACTGAAATACCTTCTCCAACAAAGACTGAAGGACAGTATGTaGCCTCCACAACCATGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: GLLKSLIPTLLKYLLQQRLKDSM*PPQPCA Trigger: TGCACATGGTTGTGGAGGTCACATACTGTCCTTCAG...TCTTTGTTGGAGAAGGTATTTCAGTAGAGTTGGAATTAGAGACTTCAAAAGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179472.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCATCATGGCAGGAGTAGGCAGGCATGGTGCTAAAGCACTAATTGAGAGCTTTCCAAAGCTGGTTCACTaGAGTATAGTTATAATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: IIMAGVGRHGAKALIESFPKLVH*SIVIIP Trigger: TGGGATTATAACTATACTCCAGTGAACCAGCTTTGG...AAAGCTCTCAATTAGTGCTTTAGCACCATGCCTGCCTACTCCTGCCATGATGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179472.8 |
||
| 3UTR-3UTR CCA 90 bp | CATCATCCTGTAGACGGTGTAGAGCTTCAGCAACATTTCTTCTCATTCTTTTTAGTGCATTTATTGGGCTaGGGAGATGGCCTAGTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: HHPVDGVELQQHFFSFFLVHLLG*GDGLVS Trigger: ACTGACTAGGCCATCTCCCCAGCCCAATAAATGCAC...TAAAAAGAATGAGAAGAAATGTTGCTGAAGCTCTACACCGTCTACAGGATGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| 3UTR-3UTR TCA 90 bp | CATCATCCTGTAGACGGTGTAGAGCTTCAGCAACATTTCTTCTCATTCTTTTTACCCTCAGTTGCTCTCTaGCATCCTCTTTTCCATAAC | + |
|
Preference number: 2 (lower is better) Translates to: HHPVDGVELQQHFFSFFLPSVAL*HPLFHN Trigger: GTTATGGAAAAGAGGATGTCAGAGAGCAACTGAGGG...TAAAAAGAATGAGAAGAAATGTTGCTGAAGCTCTACACCGTCTACAGGATGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| 3UTR-3UTR TCA 90 bp | CATCAGATATTAAAAGACAATGTTGTAAGCCAGCTTCTTGGTATCTTGGTTGGTAAGGTGGATGGTGACTaGAGGACAGTATGTGACCTC | + |
|
Preference number: 2 (lower is better) Translates to: HQILKDNVVSQLLGILVGKVDGD*RTVCDL Trigger: GAGGTCACATACTGTCCTTCAGTCACCATCCACCTT...ACCAACCAAGATACCAAGAAGCTGGCTTACAACATTGTCTTTTAATATCTGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCATGGCAGGAGTAGGCAGGCATGGTGCTAAAGCACTAATTGAGAGCTTTACAAGCTTCTTGGTATCTTaGTTGGTAGCAAATAGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: IMAGVGRHGAKALIESFTSFLVS*LVANSK Trigger: TTTGCTATTTGCTACCAACCAAGATACCAAGAAGCT...TGTAAAGCTCTCAATTAGTGCTTTAGCACCATGCCTGCCTACTCCTGCCATGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179472.8 |
||
| 3UTR-3UTR GCA 90 bp | CATCAGATATTAAAAGACAATGTTGTAAGCCAGCTTCTTGGTATCTTGGTTGGTACCTCCACAACCATGTaGATATATGTGTGCACGCGA | + |
|
Preference number: 2 (lower is better) Translates to: HQILKDNVVSQLLGILVGTSTTM*IYVCTR Trigger: TCGCGTGCACACATATATGCACATGGTTGTGGAGGT...ACCAACCAAGATACCAAGAAGCTGGCTTACAACATTGTCTTTTAATATCTGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGTTAGAGTTTTTATTCTGTAAGTTATCATCATCCTGTAGACGGTGTAGAGCTGTTTCAATGGAAAGGTaGATGGTGACTGAAGGACAG | + |
|
Preference number: 2 (lower is better) Translates to: MLEFLFCKLSSSCRRCRAVSMER*MVTEGQ Trigger: CTGTCCTTCAGTCACCATCCACCTTTCCATTGAAAC...AGCTCTACACCGTCTACAGGATGATGATAACTTACAGAATAAAAACTCTAACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGTTAGAGTTTTTATTCTGTAAGTTATCATCATCCTGTAGACGGTGTAGAGCTTTTTCTGCCCTCAGTTaGTCTCTGACATCCTCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: MLEFLFCKLSSSCRRCRAFSALS*SLTSSF Trigger: AAAAGAGGATGTCAGAGAGCAACTGAGGGCAGAAAA...AGCTCTACACCGTCTACAGGATGATGATAACTTACAGAATAAAAACTCTAACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGTTAGAGTTTTTATTCTGTAAGTTATCATCATCCTGTAGACGGTGTAGAGCTAGCTTCTTGGTATCTTaGTTGGTAGCAAATAGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: MLEFLFCKLSSSCRRCRASFLVS*LVANSK Trigger: TTTGCTATTTGCTACCAACCAAGATACCAAGAAGCT...AGCTCTACACCGTCTACAGGATGATGATAACTTACAGAATAAAAACTCTAACAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| 3UTR CCA 72 bp | GTATCCTATGAGACCAAACAGAGGAAGCACCATGCCTaGACAGGGCACTCACATGGGCCACTTTCTCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: VSYETKQRKHHA*TGHSHGPLSLL Trigger: CAGCAGAGAAAGTGGCCCATGTGAGTGCCCTGTCCAGGCATGGTGCTTCCTCTGTTTGGTCTCATAGGATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| 3UTR CCA 72 bp | GAGAGGGAGAGGGAGAGAGAGAGACTGGGCCTTGCTTaGGCTTTTGAAGTCTCTAATTCCAACTCTACTGAA | + |
|
Preference number: 3 (lower is better) Translates to: ERERERERLGLA*AFEVSNSNSTE Trigger: TTCAGTAGAGTTGGAATTAGAGACTTCAAAAGCCCAAGCAAGGCCCAGTCTCTCTCTCTCCCTCTCCCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179472.8 |
||
| 3UTR GCA 72 bp | CAGTATGTGACCTCCACAACCATGTGCATATATGTGTaGACGCGAGTGCATAGAGTTTTACTTCAGGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: QYVTSTTMCIYV*TRVHRVLLQGQ Trigger: CTGCCCCTGAAGTAAAACTCTATGCACTCGCGTGCACACATATATGCACATGGTTGTGGAGGTCACATACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAAGCTCCAAGCCAGTTAAAGATCCTGTTTCAATGGAAAGGTGGATGGTGACTCTTTTCTGCCCTCAGTaGCTCTCTGACATCCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: ASSKPVKDPVSMERWMVTLFCPQ*LSDILF Trigger: AAAGAGGATGTCAGAGAGCAACTGAGGGCAGAAAAG...AGTCACCATCCACCTTTCCATTGAAACAGGATCTTTAACTGGCTTGGAGCTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| 3UTR GCA 72 bp | GTGACTGAAGGACAGTATGTGACCTCCACAACCATGTaGATATATGTGTGCACGCGAGTGCATAGAGTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: VTEGQYVTSTTM*IYVCTRVHRVL Trigger: TAAAACTCTATGCACTCGCGTGCACACATATATGCACATGGTTGTGGAGGTCACATACTGTCCTTCAGTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| 3UTR CCA 72 bp | TCCAAGCCAGTTAAAGATCCTGTTTCAATGGAAAGGTaGATGGTGACTGAAGGACAGTATGTGACCTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: SKPVKDPVSMER*MVTEGQYVTST Trigger: TGTGGAGGTCACATACTGTCCTTCAGTCACCATCCACCTTTCCATTGAAACAGGATCTTTAACTGGCTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAAGCTCCAAGCCAGTTAAAGATCCTGTTTCAATGGAAAGGTGGATGGTGACTTTCCATAACAATCACTaGAGAGTCAAAAAGGTATCC | + |
|
Preference number: 3 (lower is better) Translates to: ASSKPVKDPVSMERWMVTFHNNH*RVKKVS Trigger: GGATACCTTTTTGACTCTCAAGTGATTGTTATGGAA...AGTCACCATCCACCTTTCCATTGAAACAGGATCTTTAACTGGCTTGGAGCTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| 3UTR-3UTR CAA 90 bp | CATCATCCTGTAGACGGTGTAGAGCTTCAGCAACATTTCTTCTCATTCTTTTTACTTTTCTGCCCTCAGTaGCTCTCTGACATCCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: HHPVDGVELQQHFFSFFLLFCPQ*LSDILF Trigger: AAAGAGGATGTCAGAGAGCAACTGAGGGCAGAAAAG...TAAAAAGAATGAGAAGAAATGTTGCTGAAGCTCTACACCGTCTACAGGATGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| 3UTR-3UTR CAA 90 bp | CATCAGATATTAAAAGACAATGTTGTAAGCCAGCTTCTTGGTATCTTGGTTGGTCTTTTCTGCCCTCAGTaGCTCTCTGACATCCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: HQILKDNVVSQLLGILVGLFCPQ*LSDILF Trigger: AAAGAGGATGTCAGAGAGCAACTGAGGGCAGAAAAG...ACCAACCAAGATACCAAGAAGCTGGCTTACAACATTGTCTTTTAATATCTGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| 3UTR TCA 72 bp | CGTATTAGAAATGTGTGTCACCTGACAGAGAGGAACTaGGAAAGGAGCTTTTGGAACATCAAACATGTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: RIRNVCHLTERN*ERSFWNIKHVE Trigger: TTCAACATGTTTGATGTTCCAAAAGCTCCTTTCTCAGTTCCTCTCTGTCAGGTGACACACATTTCTAATACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| 3UTR-3UTR CAA 90 bp | CATCATCCTGTAGACGGTGTAGAGCTTCAGCAACATTTCTTCTCATTCTTTTTATTCCATAACAATCACTaGAGAGTCAAAAAGGTATCC | + |
|
Preference number: 3 (lower is better) Translates to: HHPVDGVELQQHFFSFFLFHNNH*RVKKVS Trigger: GGATACCTTTTTGACTCTCAAGTGATTGTTATGGAA...TAAAAAGAATGAGAAGAAATGTTGCTGAAGCTCTACACCGTCTACAGGATGATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR CCA 90 bp | CAAACAGAGGAAGCACCATGCCTGGACAGGGCACTCACATGGGCCACTTTCTCTAGCAGGATCTCTGGATaGCAGTGGCTCAGCTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QTEEAPCLDRALTWATFSSRISG*QWLSCR Trigger: CCGGCAGCTGAGCCACTGCCATCCAGAGATCCTGCT...AGAGAAAGTGGCCCATGTGAGTGCCCTGTCCAGGCATGGTGCTTCCTCTGTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR GCA 90 bp | GCACCATGCCTGGACAGGGCACTCACATGGGCCACTTTCTCTGCTGCTCCGGACAAAAGCTCCCGCTTCTaGAACCTCAGTTTCCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: APCLDRALTWATFSAAPDKSSRF*NLSFQE Trigger: CTCTTGGAAACTGAGGTTGCAGAAGCGGGAGCTTTT...GTCCGGAGCAGCAGAGAAAGTGGCCCATGTGAGTGCCCTGTCCAGGCATGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR TCA 90 bp | CCAAACAGAGGAAGCACCATGCCTGGACAGGGCACTCACATGGGCCACTTTCTCGGATCTTGCCCAGCATaGTGGTCAGAGTCTTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: PNRGSTMPGQGTHMGHFLGSCPA*WSESSH Trigger: GTGTGAAGACTCTGACCATCATGCTGGGCAAGATCC...GAGAAAGTGGCCCATGTGAGTGCCCTGTCCAGGCATGGTGCTTCCTCTGTTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR CCA 90 bp | GCACCATGCCTGGACAGGGCACTCACATGGGCCACTTTCTCTGCTGCTCCGGACCTTTCATCCTGCAAATaGCCTAAGAGCGAATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: APCLDRALTWATFSAAPDLSSCK*PKSESW Trigger: CCAAGATTCGCTCTTAGGCCATTTGCAGGATGAAAG...GTCCGGAGCAGCAGAGAAAGTGGCCCATGTGAGTGCCCTGTCCAGGCATGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR TCA 90 bp | TATGAGACCAAACAGAGGAAGCACCATGCCTGGACAGGGCACTCACATGGGCCAGGATCTTGCCCAGCATaGTGGTCAGAGTCTTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: YETKQRKHHAWTGHSHGPGSCPA*WSESSH Trigger: GTGTGAAGACTCTGACCATCATGCTGGGCAAGATCC...TGGCCCATGTGAGTGCCCTGTCCAGGCATGGTGCTTCCTCTGTTTGGTCTCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR TCA 90 bp | GCACCATGCCTGGACAGGGCACTCACATGGGCCACTTTCTCTGCTGCTCCGGACGTCTGGTTAACTTGCTaGGTGAAAAATTTCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: APCLDRALTWATFSAAPDVWLTC*VKNFFH Trigger: GTGGAAGAAATTTTTCACTCAGCAAGTTAACCAGAC...GTCCGGAGCAGCAGAGAAAGTGGCCCATGTGAGTGCCCTGTCCAGGCATGGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTAAGGACGTGTGCATTTATTGGGCTGGGGAGATGGCCTAGTCAGTACAAGAGCAGGATCTCTGGATaGCAGTGGCTCAGCTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VLRTCAFIGLGRWPSQYKSRISG*QWLSCR Trigger: CCGGCAGCTGAGCCACTGCCATCCAGAGATCCTGCT...CTTGTACTGACTAGGCCATCTCCCCAGCCCAATAAATGCACACGTCCTTAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| 3UTR CAA 72 bp | GGAGGGAGAGGGAGAGGGAGAGAGAGAGACTGGGCCTaGCTTGGGCTTTTGAAGTCTCTAATTCCAACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: GGRGRGRERDWA*LGLLKSLIPTL Trigger: TAGAGTTGGAATTAGAGACTTCAAAAGCCCAAGCAAGGCCCAGTCTCTCTCTCTCCCTCTCCCTCTCCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179472.8 |
||
| CDS-3UTR GCA 90 bp | CAAACAGAGGAAGCACCATGCCTGGACAGGGCACTCACATGGGCCACTTTCTCTAAAAGCTCCCGCTTCTaGAACCTCAGTTTCCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QTEEAPCLDRALTWATFSKSSRF*NLSFQE Trigger: CTCTTGGAAACTGAGGTTGCAGAAGCGGGAGCTTTT...AGAGAAAGTGGCCCATGTGAGTGCCCTGTCCAGGCATGGTGCTTCCTCTGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR GCA 90 bp | GCAAGCTCCAAGCCAGTTAAAGATCCTGTTTCAATGGAAAGGTGGATGGTGACTTGGCAGTGGCTCAGCTaGCGGGAAAGCCTGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ASSKPVKDPVSMERWMVTWQWLS*RESLWF Trigger: GAACCACAGGCTTTCCCGGCAGCTGAGCCACTGCCA...AGTCACCATCCACCTTTCCATTGAAACAGGATCTTTAACTGGCTTGGAGCTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR CCA 90 bp | CCAAACAGAGGAAGCACCATGCCTGGACAGGGCACTCACATGGGCCACTTTCTCGTTTCCAAGAGACCTTaGAAAGGAAGGATAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PNRGSTMPGQGTHMGHFLVSKRP*KGRIAV Trigger: CACTGCTATCCTTCCTTTCCAAGGTCTCTTGGAAAC...GAGAAAGTGGCCCATGTGAGTGCCCTGTCCAGGCATGGTGCTTCCTCTGTTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR GCA 90 bp | TATGAGACCAAACAGAGGAAGCACCATGCCTGGACAGGGCACTCACATGGGCCATGCCAAGACGAAAAGTaGATTCTTCAAAAGCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: YETKQRKHHAWTGHSHGPCQDEK*ILQKLP Trigger: CGGGAGCTTTTGAAGAATGCACTTTTCGTCTTGGCA...TGGCCCATGTGAGTGCCCTGTCCAGGCATGGTGCTTCCTCTGTTTGGTCTCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR TCA 90 bp | CAAACAGAGGAAGCACCATGCCTGGACAGGGCACTCACATGGGCCACTTTCTCTAGCCTGTGGTTCTTCTaGTCTTCTTCACTTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QTEEAPCLDRALTWATFSSLWFF*SSSLWK Trigger: TTTCCAAAGTGAAGAAGATCAGAAGAACCACAGGCT...AGAGAAAGTGGCCCATGTGAGTGCCCTGTCCAGGCATGGTGCTTCCTCTGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR GCA 90 bp | TATGAGACCAAACAGAGGAAGCACCATGCCTGGACAGGGCACTCACATGGGCCATTAGGACTTTCATCCTaGAAATGGCCTAAGAGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: YETKQRKHHAWTGHSHGPLGLSS*KWPKSE Trigger: TTCGCTCTTAGGCCATTTGCAGGATGAAAGTCCTAA...TGGCCCATGTGAGTGCCCTGTCCAGGCATGGTGCTTCCTCTGTTTGGTCTCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR GCA 90 bp | GCTTACAGTTTTAGAAGGTTAATTCATTATCATCATGGCAGGAGTAGGCAGGCATGGCAGTGGCTCAGCTaGCGGGAAAGCCTGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AYSFRRLIHYHHGRSRQAWQWLS*RESLWF Trigger: GAACCACAGGCTTTCCCGGCAGCTGAGCCACTGCCA...TGCCTGCCTACTCCTGCCATGATGATAATGAATTAACCTTCTAAAACTGTAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179472.8 |
||
| CDS-3UTR TCA 90 bp | GTTTTAAGGACGTGTGCATTTATTGGGCTGGGGAGATGGCCTAGTCAGTACAAGAGCCTGTGGTTCTTCTaGTCTTCTTCACTTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VLRTCAFIGLGRWPSQYKSLWFF*SSSLWK Trigger: TTTCCAAAGTGAAGAAGATCAGAAGAACCACAGGCT...CTTGTACTGACTAGGCCATCTCCCCAGCCCAATAAATGCACACGTCCTTAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR GCA 90 bp | TGGATGGTGACTGAAGGACAGTATGTGACCTCCACAACCATGTGCATATATGTGTGCCAAGACGAAAAGTaGATTCTTCAAAAGCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: WMVTEGQYVTSTTMCIYVCQDEK*ILQKLP Trigger: CGGGAGCTTTTGAAGAATGCACTTTTCGTCTTGGCA...CACATATATGCACATGGTTGTGGAGGTCACATACTGTCCTTCAGTCACCATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR GCA 90 bp | ATGTTAGAGTTTTTATTCTGTAAGTTATCATCATCCTGTAGACGGTGTAGAGCTTGGCAGTGGCTCAGCTaGCGGGAAAGCCTGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: MLEFLFCKLSSSCRRCRAWQWLS*RESLWF Trigger: GAACCACAGGCTTTCCCGGCAGCTGAGCCACTGCCA...AGCTCTACACCGTCTACAGGATGATGATAACTTACAGAATAAAAACTCTAACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGCTCCAAGCCAGTTAAAGATCCTGTTTCAATGGAAAGGTGGATGGTGACTGTTTCCAAGAGACCTTaGAAAGGAAGGATAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ASSKPVKDPVSMERWMVTVSKRP*KGRIAV Trigger: CACTGCTATCCTTCCTTTCCAAGGTCTCTTGGAAAC...AGTCACCATCCACCTTTCCATTGAAACAGGATCTTTAACTGGCTTGGAGCTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR CCA 90 bp | ATCATCATGGCAGGAGTAGGCAGGCATGGTGCTAAAGCACTAATTGAGAGCTTTCTTTCATCCTGCAAATaGCCTAAGAGCGAATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IIMAGVGRHGAKALIESFLSSCK*PKSESW Trigger: CCAAGATTCGCTCTTAGGCCATTTGCAGGATGAAAG...AAAGCTCTCAATTAGTGCTTTAGCACCATGCCTGCCTACTCCTGCCATGATGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179472.8 |
||
| CDS-3UTR CCA 90 bp | ATGTTAGAGTTTTTATTCTGTAAGTTATCATCATCCTGTAGACGGTGTAGAGCTAGCAGGATCTCTGGATaGCAGTGGCTCAGCTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: MLEFLFCKLSSSCRRCRASRISG*QWLSCR Trigger: CCGGCAGCTGAGCCACTGCCATCCAGAGATCCTGCT...AGCTCTACACCGTCTACAGGATGATGATAACTTACAGAATAAAAACTCTAACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| 3UTR CAA 72 bp | AGAGGGAGAGAGAGAGACTGGGCCTTGCTTGGGCTTTaGAAGTCTCTAATTCCAACTCTACTGAAATACCTT | + |
|
Preference number: 4 (lower is better) Translates to: RGRERDWALLGL*KSLIPTLLKYL Trigger: AAGGTATTTCAGTAGAGTTGGAATTAGAGACTTCAAAAGCCCAAGCAAGGCCCAGTCTCTCTCTCTCCCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179472.8 |
||
| CDS-3UTR TCA 90 bp | GGGCTTTTGAAGTCTCTAATTCCAACTCTACTGAAATACCTTCTCCAACAAAGAGGATCTTGCCCAGCATaGTGGTCAGAGTCTTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: GLLKSLIPTLLKYLLQQRGSCPA*WSESSH Trigger: GTGTGAAGACTCTGACCATCATGCTGGGCAAGATCC...TCTTTGTTGGAGAAGGTATTTCAGTAGAGTTGGAATTAGAGACTTCAAAAGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179472.8 |
||
| CDS-3UTR GCA 90 bp | TCTAATCAGCAAGCTCCAAGCCAGTTAAAGATCCTGTTTCAATGGAAAGGTGGATTAGGACTTTCATCCTaGAAATGGCCTAAGAGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SNQQAPSQLKILFQWKGGLGLSS*KWPKSE Trigger: TTCGCTCTTAGGCCATTTGCAGGATGAAAGTCCTAA...TCCACCTTTCCATTGAAACAGGATCTTTAACTGGCTTGGAGCTTGCTGATTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR TCA 90 bp | TCTAATCAGCAAGCTCCAAGCCAGTTAAAGATCCTGTTTCAATGGAAAGGTGGAGTCTGGTTAACTTGCTaGGTGAAAAATTTCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SNQQAPSQLKILFQWKGGVWLTC*VKNFFH Trigger: GTGGAAGAAATTTTTCACTCAGCAAGTTAACCAGAC...TCCACCTTTCCATTGAAACAGGATCTTTAACTGGCTTGGAGCTTGCTGATTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR GCA 90 bp | CATCAGATATTAAAAGACAATGTTGTAAGCCAGCTTCTTGGTATCTTGGTTGGTAAAAGCTCCCGCTTCTaGAACCTCAGTTTCCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HQILKDNVVSQLLGILVGKSSRF*NLSFQE Trigger: CTCTTGGAAACTGAGGTTGCAGAAGCGGGAGCTTTT...ACCAACCAAGATACCAAGAAGCTGGCTTACAACATTGTCTTTTAATATCTGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR CCA 90 bp | CATCATCCTGTAGACGGTGTAGAGCTTCAGCAACATTTCTTCTCATTCTTTTTAGTTTCCAAGAGACCTTaGAAAGGAAGGATAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: HHPVDGVELQQHFFSFFLVSKRP*KGRIAV Trigger: CACTGCTATCCTTCCTTTCCAAGGTCTCTTGGAAAC...TAAAAAGAATGAGAAGAAATGTTGCTGAAGCTCTACACCGTCTACAGGATGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR TCA 90 bp | GGGCTTTTGAAGTCTCTAATTCCAACTCTACTGAAATACCTTCTCCAACAAAGAAGCCTGTGGTTCTTCTaGTCTTCTTCACTTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GLLKSLIPTLLKYLLQQRSLWFF*SSSLWK Trigger: TTTCCAAAGTGAAGAAGATCAGAAGAACCACAGGCT...TCTTTGTTGGAGAAGGTATTTCAGTAGAGTTGGAATTAGAGACTTCAAAAGCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179472.8 |
||
| 3UTR CAA 72 bp | GGAACTGAGAAAGGAGCTTTTGGAACATCAAACATGTaGAATGTTTTAAGGACGTGTGCATTTATTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTEKGAFGTSNM*NVLRTCAFIGL Trigger: CAGCCCAATAAATGCACACGTCCTTAAAACATTCAACATGTTTGATGTTCCAAAAGCTCCTTTCTCAGTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS TCA 90 bp | GAATACCGCACGCTGTCGTCCTCATCATCCAGTAAGGTCCGGGCCTaGAGGGTGATGTCTATGAAGAAGGACCCCAGCCCATGGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EYRTLSSSSSSKVRA*RVMSMKKDPSPWPW Trigger: CCAGGGCCATGGGCTGGGGTCCTTCTTCATAGACATCACCCTTCAGGCCCGGACCTTACTGGATGATGAGGACGACAGCGTGCGGTATTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR CAA 90 bp | GCACCATGCCTGGACAGGGCACTCACATGGGCCACTTTCTCTGCTGCTCCGGACGGTGTTCTTCTCTTCTaGGACTGGGAAGTAGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: APCLDRALTWATFSAAPDGVLLF*DWEVGV Trigger: CACCCCTACTTCCCAGTCCAAGAAGAGAAGAACACC...GTCCGGAGCAGCAGAGAAAGTGGCCCATGTGAGTGCCCTGTCCAGGCATGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR CAA 90 bp | GCACCATGCCTGGACAGGGCACTCACATGGGCCACTTTCTCTGCTGCTCCGGACAGTTTCCAAGAGACCTaGGAAAGGAAGGATAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: APCLDRALTWATFSAAPDSFQET*ERKDSS Trigger: ACTGCTATCCTTCCTTTCCAAGGTCTCTTGGAAACT...GTCCGGAGCAGCAGAGAAAGTGGCCCATGTGAGTGCCCTGTCCAGGCATGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR CAA 90 bp | GCACCATGCCTGGACAGGGCACTCACATGGGCCACTTTCTCTGCTGCTCCGGACCTGATCTTCTTCACTTaGGAAACTCGGCACCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: APCLDRALTWATFSAAPDLIFFT*ETRHLS Trigger: AGAAAGGTGCCGAGTTTCCAAAGTGAAGAAGATCAG...GTCCGGAGCAGCAGAGAAAGTGGCCCATGTGAGTGCCCTGTCCAGGCATGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS GCA 90 bp | CCACGAACCAGGAGGTCAAGCATAACTTTCTTATACTTTCTCACCTaGTTGTCAGGAGCTTCACGGGCCAGGGCACCCAGGCCTCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: PRTRRSSITFLYFLT*LSGASRARAPRPLI Trigger: AATGAGAGGCCTGGGTGCCCTGGCCCGTGAAGCTCCTGACAAGCAGGTGAGAAAGTATAAGAAAGTTATGCTTGACCTCCTGGTTCGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR CAA 90 bp | ATGAGACCAAACAGAGGAAGCACCATGCCTGGACAGGGCACTCACATGGGCCACGTCATTTTGCAAGCCTaGGCAACCTTAGGACTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: MRPNRGSTMPGQGTHMGHVILQA*ATLGLS Trigger: TGAAAGTCCTAAGGTTGCCAAGGCTTGCAAAATGAC...GTGGCCCATGTGAGTGCCCTGTCCAGGCATGGTGCTTCCTCTGTTTGGTCTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR CAA 90 bp | ATGAGACCAAACAGAGGAAGCACCATGCCTGGACAGGGCACTCACATGGGCCACCTGATCTTCTTCACTTaGGAAACTCGGCACCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: MRPNRGSTMPGQGTHMGHLIFFT*ETRHLS Trigger: AGAAAGGTGCCGAGTTTCCAAAGTGAAGAAGATCAG...GTGGCCCATGTGAGTGCCCTGTCCAGGCATGGTGCTTCCTCTGTTTGGTCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS CCA 90 bp | CCCTGGATCTTGCCCAGCATGATGGTCAGAGTCTTCACACTCTCATaGATAACTTCAGAACTCACAGGATCATACAGCCCACGAACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PWILPSMMVRVFTLS*ITSELTGSYSPRTR Trigger: CCTGGTTCGTGGGCTGTATGATCCTGTGAGTTCTGAAGTTATCCATGAGAGTGTGAAGACTCTGACCATCATGCTGGGCAAGATCCAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR CAA 90 bp | GTTTTAAGGACGTGTGCATTTATTGGGCTGGGGAGATGGCCTAGTCAGTACAAGGGTGTTCTTCTCTTCTaGGACTGGGAAGTAGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VLRTCAFIGLGRWPSQYKGVLLF*DWEVGV Trigger: CACCCCTACTTCCCAGTCCAAGAAGAGAAGAACACC...CTTGTACTGACTAGGCCATCTCCCCAGCCCAATAAATGCACACGTCCTTAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS TCA 90 bp | TCCTGCAAATGGCCTAAGAGCGAATCTTGGGTCTGGTTAACTTGCTaGGTGAAAAATTTCTTCCACCTCCACCCAGCAAACGAGGCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SCKWPKSESWVWLTC*VKNFFHLHPANEAN Trigger: GTTGGCCTCGTTTGCTGGGTGGAGGTGGAAGAAATTTTTCACTCAGCAAGTTAACCAGACCCAAGATTCGCTCTTAGGCCATTTGCAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR CAA 90 bp | TATGAGACCAAACAGAGGAAGCACCATGCCTGGACAGGGCACTCACATGGGCCATTGGGTCTGGTTAACTaGCTGAGTGAAAAATTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: YETKQRKHHAWTGHSHGPLGLVN*LSEKFL Trigger: AAGAAATTTTTCACTCAGCAAGTTAACCAGACCCAA...TGGCCCATGTGAGTGCCCTGTCCAGGCATGGTGCTTCCTCTGTTTGGTCTCATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR CAA 90 bp | GTTTTAAGGACGTGTGCATTTATTGGGCTGGGGAGATGGCCTAGTCAGTACAAGGCTCGAACAGTCATTTaGCAAGCCTTGGCAACCTTA | + |
|
Preference number: 5 (lower is better) Translates to: VLRTCAFIGLGRWPSQYKARTVI*QALATL Trigger: TAAGGTTGCCAAGGCTTGCAAAATGACTGTTCGAGC...CTTGTACTGACTAGGCCATCTCCCCAGCCCAATAAATGCACACGTCCTTAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR CAA 90 bp | GTTTTAAGGACGTGTGCATTTATTGGGCTGGGGAGATGGCCTAGTCAGTACAAGAGTTTCCAAGAGACCTaGGAAAGGAAGGATAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: VLRTCAFIGLGRWPSQYKSFQET*ERKDSS Trigger: ACTGCTATCCTTCCTTTCCAAGGTCTCTTGGAAACT...CTTGTACTGACTAGGCCATCTCCCCAGCCCAATAAATGCACACGTCCTTAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR CAA 90 bp | TGGATGGTGACTGAAGGACAGTATGTGACCTCCACAACCATGTGCATATATGTGGCTCGAACAGTCATTTaGCAAGCCTTGGCAACCTTA | + |
|
Preference number: 5 (lower is better) Translates to: WMVTEGQYVTSTTMCIYVARTVI*QALATL Trigger: TAAGGTTGCCAAGGCTTGCAAAATGACTGTTCGAGC...CACATATATGCACATGGTTGTGGAGGTCACATACTGTCCTTCAGTCACCATCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR CAA 90 bp | ATCATGGCAGGAGTAGGCAGGCATGGTGCTAAAGCACTAATTGAGAGCTTTACAGTCATTTTGCAAGCCTaGGCAACCTTAGGACTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: IMAGVGRHGAKALIESFTVILQA*ATLGLS Trigger: TGAAAGTCCTAAGGTTGCCAAGGCTTGCAAAATGAC...TGTAAAGCTCTCAATTAGTGCTTTAGCACCATGCCTGCCTACTCCTGCCATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179472.8 |
||
| CDS-3UTR CAA 90 bp | TCTAATCAGCAAGCTCCAAGCCAGTTAAAGATCCTGTTTCAATGGAAAGGTGGAGCTCGAACAGTCATTTaGCAAGCCTTGGCAACCTTA | + |
|
Preference number: 5 (lower is better) Translates to: SNQQAPSQLKILFQWKGGARTVI*QALATL Trigger: TAAGGTTGCCAAGGCTTGCAAAATGACTGTTCGAGC...TCCACCTTTCCATTGAAACAGGATCTTTAACTGGCTTGGAGCTTGCTGATTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR CAA 90 bp | TCTAATCAGCAAGCTCCAAGCCAGTTAAAGATCCTGTTTCAATGGAAAGGTGGAAGTTTCCAAGAGACCTaGGAAAGGAAGGATAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SNQQAPSQLKILFQWKGGSFQET*ERKDSS Trigger: ACTGCTATCCTTCCTTTCCAAGGTCTCTTGGAAACT...TCCACCTTTCCATTGAAACAGGATCTTTAACTGGCTTGGAGCTTGCTGATTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR CAA 90 bp | TCTAATCAGCAAGCTCCAAGCCAGTTAAAGATCCTGTTTCAATGGAAAGGTGGAGTCATTTTGCAAGCCTaGGCAACCTTAGGACTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SNQQAPSQLKILFQWKGGVILQA*ATLGLS Trigger: TGAAAGTCCTAAGGTTGCCAAGGCTTGCAAAATGAC...TCCACCTTTCCATTGAAACAGGATCTTTAACTGGCTTGGAGCTTGCTGATTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR CAA 90 bp | TGGATGGTGACTGAAGGACAGTATGTGACCTCCACAACCATGTGCATATATGTGTTGGGTCTGGTTAACTaGCTGAGTGAAAAATTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: WMVTEGQYVTSTTMCIYVLGLVN*LSEKFL Trigger: AAGAAATTTTTCACTCAGCAAGTTAACCAGACCCAA...CACATATATGCACATGGTTGTGGAGGTCACATACTGTCCTTCAGTCACCATCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS-3UTR CAA 90 bp | ATGTTAGAGTTTTTATTCTGTAAGTTATCATCATCCTGTAGACGGTGTAGAGCTTTGGGTCTGGTTAACTaGCTGAGTGAAAAATTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: MLEFLFCKLSSSCRRCRALGLVN*LSEKFL Trigger: AAGAAATTTTTCACTCAGCAAGTTAACCAGACCCAA...AGCTCTACACCGTCTACAGGATGATGATAACTTACAGAATAAAAACTCTAACAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS TCA 72 bp | ACGCTGTCGTCCTCATCATCCAGTAAGGTCCGGGCCTaGAGGGTGATGTCTATGAAGAAGGACCCCAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: TLSSSSSSKVRA*RVMSMKKDPSP Trigger: TGGGCTGGGGTCCTTCTTCATAGACATCACCCTTCAGGCCCGGACCTTACTGGATGATGAGGACGACAGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS CCA 72 bp | TCACGGGCCAGGGCACCCAGGCCTCTCATTGCTAGATaGCGCTTTTTAGCATTAGGATCCCGGGCTCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SRARAPRPLIAR*RFLALGSRALS Trigger: AGAAAGAGCCCGGGATCCTAATGCTAAAAAGCGCCATCTAGCAATGAGAGGCCTGGGTGCCCTGGCCCGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS CAA 90 bp | CCACGAACCAGGAGGTCAAGCATAACTTTCTTATACTTTCTCACCTaGTCAGGAGCTTCACGGGCCAGGGCACCCAGGCCTCTCATTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PRTRRSSITFLYFLT*SGASRARAPRPLIA Trigger: AGCAATGAGAGGCCTGGGTGCCCTGGCCCGTGAAGCTCCTGACAAGGTGAGAAAGTATAAGAAAGTTATGCTTGACCTCCTGGTTCGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119239.8 |
||
| CDS GCA 72 bp | AGGAGGTCAAGCATAACTTTCTTATACTTTCTCACCTaGTTGTCAGGAGCTTCACGGGCCAGGGCACCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RRSSITFLYFLT*LSGASRARAPR Trigger: CCTGGGTGCCCTGGCCCGTGAAGCTCCTGACAAGCAGGTGAGAAAGTATAAGAAAGTTATGCTTGACCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS GCA 72 bp | AATTTCTTCCACCTCCACCCAGCAAACGAGGCCAACTaGCCAAAGAGGACAAAAGCTGAATACCGCACGCTG | + |
|
Preference number: 6 (lower is better) Translates to: NFFHLHPANEAN*PKRTKAEYRTL Trigger: CAGCGTGCGGTATTCAGCTTTTGTCCTCTTTGGGCAGTTGGCCTCGTTTGCTGGGTGGAGGTGGAAGAAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS GCA 72 bp | ATTAGGATCCCGGGCTCTTTCTGCCAAGACGAAAAGTaGATTCTTCAAAAGCTCCCGCTTCTGCAACCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: IRIPGSFCQDEK*ILQKLPLLQPQ Trigger: CTGAGGTTGCAGAAGCGGGAGCTTTTGAAGAATGCACTTTTCGTCTTGGCAGAAAGAGCCCGGGATCCTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS CAA 72 bp | TACGGGACACAGGCTCGAACAGTCATTTTGCAAGCCTaGGCAACCTTAGGACTTTCATCCTGCAAATGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: YGTQARTVILQA*ATLGLSSCKWP Trigger: AGGCCATTTGCAGGATGAAAGTCCTAAGGTTGCCAAGGCTTGCAAAATGACTGTTCGAGCCTGTGTCCCGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS CAA 90 bp | GGTTTCAGATACGGGACACAGGCTCGAACAGTCATTTTGCAAGCCTaGGCAACCTTAGGACTTTCATCCTGCAAATGGCCTAAGAGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: GFRYGTQARTVILQA*ATLGLSSCKWPKSE Trigger: TTCGCTCTTAGGCCATTTGCAGGATGAAAGTCCTAAGGTTGCCAAGGCTTGCAAAATGACTGTTCGAGCCTGTGTCCCGTATCTGAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS CAA 90 bp | ACCTTTCTGGGTTTCAGATACGGGACACAGGCTCGAACAGTCATTTaGCAAGCCTTGGCAACCTTAGGACTTTCATCCTGCAAATGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: TFLGFRYGTQARTVI*QALATLGLSSCKWP Trigger: AGGCCATTTGCAGGATGAAAGTCCTAAGGTTGCCAAGGCTTGCAAAATGACTGTTCGAGCCTGTGTCCCGTATCTGAAACCCAGAAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS CCA 72 bp | CAAGCCTTGGCAACCTTAGGACTTTCATCCTGCAAATaGCCTAAGAGCGAATCTTGGGTCTGGTTAACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: QALATLGLSSCK*PKSESWVWLTC Trigger: GCAAGTTAACCAGACCCAAGATTCGCTCTTAGGCCATTTGCAGGATGAAAGTCCTAAGGTTGCCAAGGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS TCA 72 bp | TGGCCTAAGAGCGAATCTTGGGTCTGGTTAACTTGCTaGGTGAAAAATTTCTTCCACCTCCACCCAGCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: WPKSESWVWLTC*VKNFFHLHPAN Trigger: GTTTGCTGGGTGGAGGTGGAAGAAATTTTTCACTCAGCAAGTTAACCAGACCCAAGATTCGCTCTTAGGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS CCA 72 bp | TTGCCCAGCATGATGGTCAGAGTCTTCACACTCTCATaGATAACTTCAGAACTCACAGGATCATACAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LPSMMVRVFTLS*ITSELTGSYSP Trigger: TGGGCTGTATGATCCTGTGAGTTCTGAAGTTATCCATGAGAGTGTGAAGACTCTGACCATCATGCTGGGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||
| CDS GCA 72 bp | AAGACGAAAAGTGCATTCTTCAAAAGCTCCCGCTTCTaGAACCTCAGTTTCCAAGAGACCTTGGAAAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: KTKSAFFKSSRF*NLSFQETLERK Trigger: CTTCCTTTCCAAGGTCTCTTGGAAACTGAGGTTGCAGAAGCGGGAGCTTTTGAAGAATGCACTTTTCGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000134847.2 ENSMUST00000179472.8 |
||
| CDS GCA 72 bp | ATTTTGCAAGCCTTGGCAACCTTAGGACTTTCATCCTaGAAATGGCCTAAGAGCGAATCTTGGGTCTGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: ILQALATLGLSS*KWPKSESWVWL Trigger: TAACCAGACCCAAGATTCGCTCTTAGGCCATTTGCAGGATGAAAGTCCTAAGGTTGCCAAGGCTTGCAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119239.8 ENSMUST00000120033.8 ENSMUST00000179472.8 |
||