Pregenerated sensors for MRM3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038046Ensembl transcript IDs: ENSMUST00000040577.5
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | ACACAATGGTGGCAGTGCCTACCCCCTGGCTCCTGTGTTGTCACCTaGGCCAGCCTCCTAGCAGAGGAGGGGCTGGAGGTGCCCTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: TQWWQCLPPGSCVVT*ASLLAEEGLEVPFP Trigger: GGGGAAGGGCACCTCCAGCCCCTCCTCTGCTAGGAGGCTGGCCAAGGTGACAACACAGGAGCCAGGGGGTAGGCACTGCCACCATTGTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| 3UTR CCA 72 bp | TTTAAGTACCACACAATGGTGGCAGTGCCTACCCCCTaGCTCCTGTGTTGTCACCTTGGCCAGCCTCCTAGC | + |
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Preference number: 3 (lower is better) Translates to: FKYHTMVAVPTP*LLCCHLGQPPS Trigger: GCTAGGAGGCTGGCCAAGGTGACAACACAGGAGCCAGGGGGTAGGCACTGCCACCATTGTGTGGTACTTAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| 3UTR CAA 72 bp | TGGCAGTGCCTACCCCCTGGCTCCTGTGTTGTCACCTaGGCCAGCCTCCTAGCAGAGGAGGGGCTGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: WQCLPPGSCVVT*ASLLAEEGLEV Trigger: CACCTCCAGCCCCTCCTCTGCTAGGAGGCTGGCCAAGGTGACAACACAGGAGCCAGGGGGTAGGCACTGCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS-3UTR TCA 90 bp | GTGGCAGTGCCTACCCCCTGGCTCCTGTGTTGTCACCTTGGCCAGCCTCCTAGCGCCTCTTCCCAGGTGTaGGGGGTCTGGGATGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: VAVPTPWLLCCHLGQPPSASSQV*GVWDGD Trigger: ATCCCCATCCCAGACCCCTCACACCTGGGAAGAGGC...GCTAGGAGGCTGGCCAAGGTGACAACACAGGAGCCAGGGGGTAGGCACTGCCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS-3UTR TCA 90 bp | GGCTCCTGTGTTGTCACCTTGGCCAGCCTCCTAGCAGAGGAGGGGCTGGAGGTGGCTCGCAGCCATGGCTaGGTTCAGACTGTCCACACC | + |
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Preference number: 4 (lower is better) Translates to: GSCVVTLASLLAEEGLEVARSHG*VQTVHT Trigger: GGTGTGGACAGTCTGAACTCAGCCATGGCTGCGAGC...CACCTCCAGCCCCTCCTCTGCTAGGAGGCTGGCCAAGGTGACAACACAGGAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS-3UTR GCA 90 bp | GTGGCAGTGCCTACCCCCTGGCTCCTGTGTTGTCACCTTGGCCAGCCTCCTAGCATGTGCCCCCATGCCTaGCCGGAGCACTTTAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: VAVPTPWLLCCHLGQPPSMCPHA*PEHFRL Trigger: GAGCCTAAAGTGCTCCGGGCAGGCATGGGGGCACAT...GCTAGGAGGCTGGCCAAGGTGACAACACAGGAGCCAGGGGGTAGGCACTGCCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS-3UTR GCA 90 bp | CAGTGCCTACCCCCTGGCTCCTGTGTTGTCACCTTGGCCAGCCTCCTAGCAGAGGGGTACCTGGAAATGTaGCCCCATGCCTGCCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: QCLPPGSCVVTLASLLAEGYLEM*PHACPE Trigger: CTCCGGGCAGGCATGGGGGCACATTTCCAGGTACCC...CTCTGCTAGGAGGCTGGCCAAGGTGACAACACAGGAGCCAGGGGGTAGGCACTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS-3UTR GCA 90 bp | CCTGGCTCCTGTGTTGTCACCTTGGCCAGCCTCCTAGCAGAGGAGGGGCTGGAGATCGTAGCGAAGCCCTaGCTCTTCCCAGGTGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: PGSCVVTLASLLAEEGLEIVAKP*LFPGVR Trigger: CCTCACACCTGGGAAGAGGCAGGGCTTCGCTACGAT...CTCCAGCCCCTCCTCTGCTAGGAGGCTGGCCAAGGTGACAACACAGGAGCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS-3UTR GCA 90 bp | GCAGTGCCTACCCCCTGGCTCCTGTGTTGTCACCTTGGCCAGCCTCCTAGCAGAGAATCGGCGATCACATaGCCAGTCACGGTCACCGGT | + |
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Preference number: 4 (lower is better) Translates to: AVPTPWLLCCHLGQPPSRESAIT*PVTVTG Trigger: ACCGGTGACCGTGACTGGGCATGTGATCGCCGATTC...TCTGCTAGGAGGCTGGCCAAGGTGACAACACAGGAGCCAGGGGGTAGGCACTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS-3UTR GCA 90 bp | GTGCCTACCCCCTGGCTCCTGTGTTGTCACCTTGGCCAGCCTCCTAGCAGAGGATCCAGGCTCACTCCATaGGTCTCCCCACCTATCACC | + |
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Preference number: 4 (lower is better) Translates to: VPTPWLLCCHLGQPPSRGSRLTP*VSPPIT Trigger: GGTGATAGGTGGGGAGACGCATGGAGTGAGCCTGGA...TCCTCTGCTAGGAGGCTGGCCAAGGTGACAACACAGGAGCCAGGGGGTAGGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS-3UTR CCA 90 bp | TGGCAGTGCCTACCCCCTGGCTCCTGTGTTGTCACCTTGGCCAGCCTCCTAGCAGTGAGGGGTCTGGGATaGGGATGTCTCAAGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: WQCLPPGSCVVTLASLLAVRGLG*GCLKRL Trigger: CAGCCTCTTGAGACATCCCCATCCCAGACCCCTCAC...TGCTAGGAGGCTGGCCAAGGTGACAACACAGGAGCCAGGGGGTAGGCACTGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS-3UTR TCA 90 bp | CCTGGCTCCTGTGTTGTCACCTTGGCCAGCCTCCTAGCAGAGGAGGGGCTGGAGGTGTCAGGAGGCAAGTaGTTGGGCACTGTTTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: PGSCVVTLASLLAEEGLEVSGGK*LGTVSH Trigger: ATGGGAAACAGTGCCCAATCACTTGCCTCCTGACAC...CTCCAGCCCCTCCTCTGCTAGGAGGCTGGCCAAGGTGACAACACAGGAGCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS-3UTR GCA 90 bp | GTGCCTACCCCCTGGCTCCTGTGTTGTCACCTTGGCCAGCCTCCTAGCAGAGGACACCACAGCTGCTGGTaGTCCTGTCCAGTCCAAATC | + |
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Preference number: 4 (lower is better) Translates to: VPTPWLLCCHLGQPPSRGHHSCW*SCPVQI Trigger: GATTTGGACTGGACAGGAGCACCAGCAGCTGTGGTG...TCCTCTGCTAGGAGGCTGGCCAAGGTGACAACACAGGAGCCAGGGGGTAGGCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS-3UTR GCA 90 bp | CAGTGCCTACCCCCTGGCTCCTGTGTTGTCACCTTGGCCAGCCTCCTAGCAGAGGTACTCTCGGCCAGTTaGAGGGATTCCAGGCTCACT | + |
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Preference number: 4 (lower is better) Translates to: QCLPPGSCVVTLASLLAEVLSAS*RDSRLT Trigger: AGTGAGCCTGGAATCCCTGCAACTGGCCGAGAGTAC...CTCTGCTAGGAGGCTGGCCAAGGTGACAACACAGGAGCCAGGGGGTAGGCACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS-3UTR GCA 90 bp | GCAGTGCCTACCCCCTGGCTCCTGTGTTGTCACCTTGGCCAGCCTCCTAGCAGACTATTGTCATCACACTaGTTAGCCTCCTGTCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: AVPTPWLLCCHLGQPPSRLLSSH*LASCPR Trigger: CCGGGGACAGGAGGCTAAGCAGTGTGATGACAATAG...TCTGCTAGGAGGCTGGCCAAGGTGACAACACAGGAGCCAGGGGGTAGGCACTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS-3UTR GCA 90 bp | CAGTGCCTACCCCCTGGCTCCTGTGTTGTCACCTTGGCCAGCCTCCTAGCAGAGGACTTTACTGCAGCCTaGTCCAGCTGCAGATCTCAG | + |
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Preference number: 4 (lower is better) Translates to: QCLPPGSCVVTLASLLAEDFTAA*SSCRSQ Trigger: CTGAGATCTGCAGCTGGAGCAGGCTGCAGTAAAGTC...CTCTGCTAGGAGGCTGGCCAAGGTGACAACACAGGAGCCAGGGGGTAGGCACTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS-3UTR GCA 90 bp | GTGCCTACCCCCTGGCTCCTGTGTTGTCACCTTGGCCAGCCTCCTAGCAGAGGACATCTGCAATCAGCCTaGGACCTTCCAGTAGGATCT | + |
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Preference number: 4 (lower is better) Translates to: VPTPWLLCCHLGQPPSRGHLQSA*DLPVGS Trigger: AGATCCTACTGGAAGGTCGCAGGCTGATTGCAGATG...TCCTCTGCTAGGAGGCTGGCCAAGGTGACAACACAGGAGCCAGGGGGTAGGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS-3UTR GCA 90 bp | GTGCCTACCCCCTGGCTCCTGTGTTGTCACCTTGGCCAGCCTCCTAGCAGAGGAGTGACCACAGTTGTCTaGCACATAGACTCGAGTGTC | + |
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Preference number: 4 (lower is better) Translates to: VPTPWLLCCHLGQPPSRGVTTVV*HIDSSV Trigger: GACACTCGAGTCTATGTGGCAGACAACTGTGGTCAC...TCCTCTGCTAGGAGGCTGGCCAAGGTGACAACACAGGAGCCAGGGGGTAGGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS-3UTR CCA 90 bp | CAGTGCCTACCCCCTGGCTCCTGTGTTGTCACCTTGGCCAGCCTCCTAGCAGAGCAGGAGGCAAGTGATTaGGCACTGTTTCCCATTCCA | + |
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Preference number: 4 (lower is better) Translates to: QCLPPGSCVVTLASLLAEQEASD*ALFPIP Trigger: TGGAATGGGAAACAGTGCCCAATCACTTGCCTCCTG...CTCTGCTAGGAGGCTGGCCAAGGTGACAACACAGGAGCCAGGGGGTAGGCACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS-3UTR CCA 90 bp | GTGCCTACCCCCTGGCTCCTGTGTTGTCACCTTGGCCAGCCTCCTAGCAGAGGACCACATTGTTCACAATaGGTACCTGGAAATGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: VPTPWLLCCHLGQPPSRGPHCSQ*VPGNVP Trigger: GGGCACATTTCCAGGTACCCATTGTGAACAATGTGG...TCCTCTGCTAGGAGGCTGGCCAAGGTGACAACACAGGAGCCAGGGGGTAGGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS-3UTR CAA 90 bp | GCAGTGCCTACCCCCTGGCTCCTGTGTTGTCACCTTGGCCAGCCTCCTAGCAGAGGGATCAGCAGTCTCTaGCCACCGGTACTCTCGGCC | + |
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Preference number: 5 (lower is better) Translates to: AVPTPWLLCCHLGQPPSRGISSL*PPVLSA Trigger: GGCCGAGAGTACCGGTGGCAAGAGACTGCTGATCCC...TCTGCTAGGAGGCTGGCCAAGGTGACAACACAGGAGCCAGGGGGTAGGCACTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS-3UTR CAA 90 bp | CAGTGCCTACCCCCTGGCTCCTGTGTTGTCACCTTGGCCAGCCTCCTAGCAGAGGGTACTCTCGGCCAGTaGCAGGGATTCCAGGCTCAC | + |
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Preference number: 5 (lower is better) Translates to: QCLPPGSCVVTLASLLAEGTLGQ*QGFQAH Trigger: GTGAGCCTGGAATCCCTGCAACTGGCCGAGAGTACC...CTCTGCTAGGAGGCTGGCCAAGGTGACAACACAGGAGCCAGGGGGTAGGCACTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS CCA 90 bp | GTCTGGGATGGGGATGTCTCAAGAGGCTGTTTCTGTCGCTGTCCCTaGGAACTGGCCTTAGGGACCGCCTTGCGAGGCTGCTGGTCAGGA | + |
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Preference number: 5 (lower is better) Translates to: VWDGDVSRGCFCRCP*ELALGTALRGCWSG Trigger: TCCTGACCAGCAGCCTCGCAAGGCGGTCCCTAAGGCCAGTTCCCAGGGACAGCGACAGAAACAGCCTCTTGAGACATCCCCATCCCAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS-3UTR CAA 90 bp | GGCTCCTGTGTTGTCACCTTGGCCAGCCTCCTAGCAGAGGAGGGGCTGGAGGTGCTCTGGACCTCAAGTTaGGGCAGCCAGTCCTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: GSCVVTLASLLAEEGLEVLWTSS*GSQSFL Trigger: CAGAAAGGACTGGCTGCCCAAACTTGAGGTCCAGAG...CACCTCCAGCCCCTCCTCTGCTAGGAGGCTGGCCAAGGTGACAACACAGGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS-3UTR CAA 90 bp | GGCTCCTGTGTTGTCACCTTGGCCAGCCTCCTAGCAGAGGAGGGGCTGGAGGTGCTGACGTCTTTCAGCTaGTCTACCGGCAACTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: GSCVVTLASLLAEEGLEVLTSFS*STGNSL Trigger: CAAGGAGTTGCCGGTAGACAAGCTGAAAGACGTCAG...CACCTCCAGCCCCTCCTCTGCTAGGAGGCTGGCCAAGGTGACAACACAGGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS-3UTR CAA 90 bp | GGCTCCTGTGTTGTCACCTTGGCCAGCCTCCTAGCAGAGGAGGGGCTGGAGGTGGTTTCCCATTCCACATaGTTCACAATGGGTACCTGG | + |
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Preference number: 5 (lower is better) Translates to: GSCVVTLASLLAEEGLEVVSHST*FTMGTW Trigger: CCAGGTACCCATTGTGAACAATGTGGAATGGGAAAC...CACCTCCAGCCCCTCCTCTGCTAGGAGGCTGGCCAAGGTGACAACACAGGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS GCA 90 bp | GGTTTTATCAGACATCTGAACCTGGGCATAGTGACCACAGTTGTCTaGCACATAGACTCGAGTGTCAGGAGGCAAGTGATTGGGCACTGT | + |
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Preference number: 5 (lower is better) Translates to: GFIRHLNLGIVTTVV*HIDSSVRRQVIGHC Trigger: ACAGTGCCCAATCACTTGCCTCCTGACACTCGAGTCTATGTGGCAGACAACTGTGGTCACTATGCCCAGGTTCAGATGTCTGATAAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS TCA 90 bp | AGCCAGTCCTTTCTGGTTTTAGTGTCTAGGTCCTCTTCATACTTGTaGAACTTTAAGAATCGGCGATCACATGCCCAGTCACGGTCACCG | + |
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Preference number: 5 (lower is better) Translates to: SQSFLVLVSRSSSYL*NFKNRRSHAQSRSP Trigger: CGGTGACCGTGACTGGGCATGTGATCGCCGATTCTTAAAGTTTCACAAGTATGAAGAGGACCTAGACACTAAAACCAGAAAGGACTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS CCA 72 bp | GCCCGGACCCAGCGCCGAGCGTTGAGGTCCCGAGTCTaGACCACCCGCAGCAATGATCCCAGGGAGCACCAC | + |
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Preference number: 6 (lower is better) Translates to: ARTQRRALRSRV*TTRSNDPREHH Trigger: GTGGTGCTCCCTGGGATCATTGCTGCGGGTGGTCCAGACTCGGGACCTCAACGCTCGGCGCTGGGTCCGGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS TCA 72 bp | AGCGTTGAGGTCCCGAGTCTGGACCACCCGCAGCAATaGTCCCAGGGAGCACCACATGCCCTTCGCCGGCGC | + |
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Preference number: 6 (lower is better) Translates to: SVEVPSLDHPQQ*SQGAPHALRRR Trigger: GCGCCGGCGAAGGGCATGTGGTGCTCCCTGGGATCATTGCTGCGGGTGGTCCAGACTCGGGACCTCAACGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS CAA 72 bp | GATCAGCAGTCTCTTGCCACCGGTACTCTCGGCCAGTaGCAGGGATTCCAGGCTCACTCCATGCGTCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: DQQSLATGTLGQ*QGFQAHSMRLP Trigger: GGGGAGACGCATGGAGTGAGCCTGGAATCCCTGCAACTGGCCGAGAGTACCGGTGGCAAGAGACTGCTGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS GCA 72 bp | ATCAGCAGTCTCTTGCCACCGGTACTCTCGGCCAGTTaGAGGGATTCCAGGCTCACTCCATGCGTCTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: ISSLLPPVLSAS*RDSRLTPCVSP Trigger: TGGGGAGACGCATGGAGTGAGCCTGGAATCCCTGCAACTGGCCGAGAGTACCGGTGGCAAGAGACTGCTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS GCA 72 bp | CCATTCCACATTGTTCACAATGGGTACCTGGAAATGTaGCCCCATGCCTGCCCGGAGCACTTTAGGCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: PFHIVHNGYLEM*PHACPEHFRLP Trigger: TGGGAGCCTAAAGTGCTCCGGGCAGGCATGGGGGCACATTTCCAGGTACCCATTGTGAACAATGTGGAATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS CCA 72 bp | ACTGTTTCCCATTCCACATTGTTCACAATGGGTACCTaGAAATGTGCCCCCATGCCTGCCCGGAGCACTTTA | + |
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Preference number: 6 (lower is better) Translates to: TVSHSTLFTMGT*KCAPMPARSTL Trigger: TAAAGTGCTCCGGGCAGGCATGGGGGCACATTTCCAGGTACCCATTGTGAACAATGTGGAATGGGAAACAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS GCA 72 bp | AGACATCTGAACCTGGGCATAGTGACCACAGTTGTCTaGCACATAGACTCGAGTGTCAGGAGGCAAGTGATT | + |
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Preference number: 6 (lower is better) Translates to: RHLNLGIVTTVV*HIDSSVRRQVI Trigger: AATCACTTGCCTCCTGACACTCGAGTCTATGTGGCAGACAACTGTGGTCACTATGCCCAGGTTCAGATGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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| CDS TCA 72 bp | TTTCTGGTTTTAGTGTCTAGGTCCTCTTCATACTTGTaGAACTTTAAGAATCGGCGATCACATGCCCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: FLVLVSRSSSYL*NFKNRRSHAQS Trigger: TGACTGGGCATGTGATCGCCGATTCTTAAAGTTTCACAAGTATGAAGAGGACCTAGACACTAAAACCAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040577.5 |
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