Pregenerated sensors for MRGPRX2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074109Ensembl transcript IDs: ENSMUST00000098433.5, ENSMUST00000186394.2
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACATGGGGTGTGGGTGGAAGCATTGGGGATTTGCAACCTCAAATTTaGAACCCGGAGTGTCATACCTCCTCAAACAAGGCCACAGGTCCT | + |
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Preference number: 1 (lower is better) Translates to: TWGVGGSIGDLQPQI*NPECHTSSNKATGP Trigger: AGGACCTGTGGCCTTGTTTGAGGAGGTATGACACTCCGGGTTGCAAATTTGAGGTTGCAAATCCCCAATGCTTCCACCCACACCCCATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
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| 3UTR GCA 90 bp | AATGTCACAATTGAGACATTTCCAGGCCTCCAAGCAAGGACTCCCTaGTTACATGTCTGTCCTCATTCACTTTTCTTAACCTTGGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: NVTIETFPGLQARTP*LHVCPHSLFLTLEE Trigger: TTCCTCCAAGGTTAAGAAAAGTGAATGAGGACAGACATGTAAGCAGGGAGTCCTTGCTTGGAGGCCTGGAAATGTCTCAATTGTGACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| 3UTR CCA 90 bp | AAATCTTTATGCATTTCCCCTGTGCAAGTTGAAAGCTTAGCTGGGTaGTGTCTTGGCCTAGAGCAGAATCTCATTTATTCCATTTCCCAT | + |
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Preference number: 1 (lower is better) Translates to: KSLCISPVQVESLAG*CLGLEQNLIYSISH Trigger: ATGGGAAATGGAATAAATGAGATTCTGCTCTAGGCCAAGACACCACCCAGCTAAGCTTTCAACTTGCACAGGGGAAATGCATAAAGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| 3UTR CCA 90 bp | ACAGTCAGAGAGCATGAGGATCATATCAAAGACAATACTCAACTATaGGATGCTAAAAAGGAAACTGTGAATAGAACCACAGAGGACACT | + |
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Preference number: 1 (lower is better) Translates to: TVREHEDHIKDNTQL*DAKKETVNRTTEDT Trigger: AGTGTCCTCTGTGGTTCTATTCACAGTTTCCTTTTTAGCATCCCATAGTTGAGTATTGTCTTTGATATGATCCTCATGCTCTCTGACTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
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| 3UTR TCA 90 bp | ATATCAAAGACAATACTCAACTATGGGATGCTAAAAAGGAAACTGTaGATAGAACCACAGAGGACACTGCACCTTCCTATGTACATGGAT | + |
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Preference number: 1 (lower is better) Translates to: ISKTILNYGMLKRKL*IEPQRTLHLPMYMD Trigger: ATCCATGTACATAGGAAGGTGCAGTGTCCTCTGTGGTTCTATTCACAGTTTCCTTTTTAGCATCCCATAGTTGAGTATTGTCTTTGATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
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| 3UTR TCA 90 bp | TATTTCAAGGGAGTCTTTATAGAGGACCTCATTGGAAACTTTTCATaGGGGATTACACAGTCAGAGAGCATGAGGATCATATCAAAGACA | + |
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Preference number: 1 (lower is better) Translates to: YFKGVFIEDLIGNFS*GITQSESMRIISKT Trigger: TGTCTTTGATATGATCCTCATGCTCTCTGACTGTGTAATCCCTCATGAAAAGTTTCCAATGAGGTCCTCTATAAAGACTCCCTTGAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
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| 3UTR CCA 90 bp | TGTACAATGCTTTCAGAATCACTTTCATCCATATTCCTTCTAGGATaGTCTGTTAAGCCCTACATCAATCACATCCCTAATCCAAAATCC | + |
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Preference number: 1 (lower is better) Translates to: CTMLSESLSSIFLLG*SVKPYINHIPNPKS Trigger: GGATTTTGGATTAGGGATGTGATTGATGTAGGGCTTAACAGACCATCCTAGAAGGAATATGGATGAAAGTGATTCTGAAAGCATTGTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| 3UTR GCA 90 bp | CAATACATTTCTCTCTCTTGGACTTGTTTCACTCTCTCTATACAGTaGTTCTTGTCAGATATGCCATACTTTTGGCATCTCCAATATCTT | + |
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Preference number: 1 (lower is better) Translates to: QYISLSWTCFTLSIQ*FLSDMPYFWHLQYL Trigger: AAGATATTGGAGATGCCAAAAGTATGGCATATCTGACAAGAAGCACTGTATAGAGAGAGTGAAACAAGTCCAAGAGAGAGAAATGTATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| 3UTR-3UTR CCA 90 bp | ATCCATGACCATCATAGCCAGAAGCCTGACAGTAGGCAAGCAGGTTGCCATGGCGAAAGCTTAGCTGGGTaGTGTCTTGGCCTAGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: IHDHHSQKPDSRQAGCHGESLAG*CLGLEQ Trigger: CTGCTCTAGGCCAAGACACCACCCAGCTAAGCTTTC...GCCATGGCAACCTGCTTGCCTACTGTCAGGCTTCTGGCTATGATGGTCATGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| 3UTR-3UTR TCA 90 bp | CATGACCATCATAGCCAGAAGCCTGACAGTAGGCAAGCAGGTTGCCATGGCAATTCACAATGTCACAATTaGGACATTTCCAGGCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: HDHHSQKPDSRQAGCHGNSQCHN*DISRPP Trigger: TGGAGGCCTGGAAATGTCTCAATTGTGACATTGTGA...ATTGCCATGGCAACCTGCTTGCCTACTGTCAGGCTTCTGGCTATGATGGTCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| 3UTR-3UTR CCA 90 bp | TGGTGTCTTGGCCTAGAGCAGAATCTCATTTATTCCATTTCCCATCAGGACCTTCACATGGGGTGTGGGTaGAAGCATTGGGGATTTGCA | + |
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Preference number: 2 (lower is better) Translates to: WCLGLEQNLIYSISHQDLHMGCG*KHWGFA Trigger: TGCAAATCCCCAATGCTTCCACCCACACCCCATGTG...AAGGTCCTGATGGGAAATGGAATAAATGAGATTCTGCTCTAGGCCAAGACACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| 3UTR-3UTR TCA 90 bp | CATGACCATCATAGCCAGAAGCCTGACAGTAGGCAAGCAGGTTGCCATGGCAATATTGGAAACTTTTCATaGGGGATTACACAGTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: HDHHSQKPDSRQAGCHGNIGNFS*GITQSE Trigger: CTCTGACTGTGTAATCCCTCATGAAAAGTTTCCAAT...ATTGCCATGGCAACCTGCTTGCCTACTGTCAGGCTTCTGGCTATGATGGTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| 3UTR-3UTR TCA 90 bp | GGGATTTATCAATTGTGGTCAACAGCTTTCCTGGACCCCACAGAGCTTGCAAGGCAACTTCTACAACATTaGCTACTTTCCCAACTGAGT | + |
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Preference number: 2 (lower is better) Translates to: GIYQLWSTAFLDPTELARQLLQH*LLSQLS Trigger: ACTCAGTTGGGAAAGTAGTCAATGTTGTAGAAGTTG...CCTTGCAAGCTCTGTGGGGTCCAGGAAAGCTGTTGACCACAATTGATAAATCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
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| 3UTR-3UTR CCA 90 bp | ACAAGGCCACAGGTCCTAATCCTGCCCAAACAATTCCAACAATTAGGGGTAAGCGGGATTTATCAATTGTaGTCAACAGCTTTCCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: TRPQVLILPKQFQQLGVSGIYQL*STAFLD Trigger: GTCCAGGAAAGCTGTTGACCACAATTGATAAATCCC...GCTTACCCCTAATTGTTGGAATTGTTTGGGCAGGATTAGGACCTGTGGCCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
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| 3UTR-3UTR GCA 90 bp | TGGTGTCTTGGCCTAGAGCAGAATCTCATTTATTCCATTTCCCATCAGGACCTTCCTGAGCAAGATAGCTaGAGAAATGTTGTACCCAGT | + |
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Preference number: 2 (lower is better) Translates to: WCLGLEQNLIYSISHQDLPEQDS*RNVVPS Trigger: ACTGGGTACAACATTTCTGCAGCTATCTTGCTCAGG...AAGGTCCTGATGGGAAATGGAATAAATGAGATTCTGCTCTAGGCCAAGACACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| 3UTR-3UTR TCA 90 bp | GTAAAATCTAGGCTTCATCTTCACAATGTCATGTCACAAAGTCACAATGTCACACTCCTGCATCCTTCTTaGCTCAAAGGCCAGAACCAG | + |
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Preference number: 2 (lower is better) Translates to: VKSRLHLHNVMSQSHNVTLLHPS*LKGQNQ Trigger: CTGGTTCTGGCCTTTGAGTCAAGAAGGATGCAGGAG...TGTGACATTGTGACTTTGTGACATGACATTGTGAAGATGAAGCCTAGATTTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| 3UTR-3UTR TCA 90 bp | TCCAACAAGAGCACTCATTTTAATCTATCCCAAACAGTTCCACCAACCTGGGGCGTCCAAAGTCTCTTATaGGACTCAAGACAATCTTTC | + |
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Preference number: 2 (lower is better) Translates to: SNKSTHFNLSQTVPPTWGVQSLL*DSRQSF Trigger: GAAAGATTGTCTTGAGTCTCATAAGAGACTTTGGAC...GCCCCAGGTTGGTGGAACTGTTTGGGATAGATTAAAATGAGTGCTCTTGTTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| 3UTR-3UTR TCA 90 bp | TCCAACAAGAGCACTCATTTTAATCTATCCCAAACAGTTCCACCAACCTGGGGCACATTAAGTCCAACTTaGAAAGTCTGCAGTCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: SNKSTHFNLSQTVPPTWGTLSPT*KVCSLS Trigger: GGAAAGACTGCAGACTTTTCAAGTTGGACTTAATGT...GCCCCAGGTTGGTGGAACTGTTTGGGATAGATTAAAATGAGTGCTCTTGTTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| 3UTR-3UTR GCA 90 bp | GCCCAAACAATTCCAACAATTAGGGGTAAGCCTATGGTAGCCATTTTCATTCAACCTGAGCAAGATAGCTaGAGAAATGTTGTACCCAGT | + |
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Preference number: 2 (lower is better) Translates to: AQTIPTIRGKPMVAIFIQPEQDS*RNVVPS Trigger: ACTGGGTACAACATTTCTGCAGCTATCTTGCTCAGG...TTGAATGAAAATGGCTACCATAGGCTTACCCCTAATTGTTGGAATTGTTTGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
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| 3UTR-3UTR GCA 90 bp | GAGAGCATGAGGATCATATCAAAGACAATACTCAACTATGGGATGCTAAAAAGGAACCACAGAGGACACTaGACCTTCCTATGTACATGG | + |
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Preference number: 2 (lower is better) Translates to: ESMRIISKTILNYGMLKRNHRGH*TFLCTW Trigger: CCATGTACATAGGAAGGTGCAGTGTCCTCTGTGGTT...CCTTTTTAGCATCCCATAGTTGAGTATTGTCTTTGATATGATCCTCATGCTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGTGAATAGAACCACAGAGGACACTGCACCTTCCTATGTACATGGATGTTTAGGGATTTATCAATTGTaGTCAACAGCTTTCCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: TVNRTTEDTAPSYVHGCLGIYQL*STAFLD Trigger: GTCCAGGAAAGCTGTTGACCACAATTGATAAATCCC...TAAACATCCATGTACATAGGAAGGTGCAGTGTCCTCTGTGGTTCTATTCACAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
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| 3UTR-3UTR CCA 90 bp | CTTACATGTCTGTCCTCATTCACTTTTCTTAACCTTGGAGGAAGATTCTATAATCTTCCACATGGGGTGTaGGTGGAAGCATTGGGGATT | + |
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Preference number: 2 (lower is better) Translates to: LTCLSSFTFLNLGGRFYNLPHGV*VEALGI Trigger: AATCCCCAATGCTTCCACCCACACCCCATGTGGAAG...ATTATAGAATCTTCCTCCAAGGTTAAGAAAAGTGAATGAGGACAGACATGTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| 3UTR-3UTR TCA 90 bp | GCCCAAACAATTCCAACAATTAGGGGTAAGCCTATGGTAGCCATTTTCATTCAAATTGGAAACTTTTCATaGGGGATTACACAGTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: AQTIPTIRGKPMVAIFIQIGNFS*GITQSE Trigger: CTCTGACTGTGTAATCCCTCATGAAAAGTTTCCAAT...TTGAATGAAAATGGCTACCATAGGCTTACCCCTAATTGTTGGAATTGTTTGGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
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| 3UTR-3UTR GCA 90 bp | TCACTTTTCTTAACCTTGGAGGAAGATTCTATAATCCCTTTACTCCTGCATCCTCCAACTTCTGTTGTCTaGTCAGTGTTGAACTGTCAA | + |
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Preference number: 2 (lower is better) Translates to: SLFLTLEEDSIIPLLLHPPTSVV*SVLNCQ Trigger: TTGACAGTTCAACACTGAGCAGACAACAGAAGTTGG...AGGATGCAGGAGTAAAGGGATTATAGAATCTTCCTCCAAGGTTAAGAAAAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| 3UTR-3UTR TCA 90 bp | TCACTTTTCTTAACCTTGGAGGAAGATTCTATAATCCCTTTACTCCTGCATCCTCTAAAAAGGAAACTGTaGATAGAACCACAGAGGACA | + |
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Preference number: 2 (lower is better) Translates to: SLFLTLEEDSIIPLLLHPLKRKL*IEPQRT Trigger: TGTCCTCTGTGGTTCTATTCACAGTTTCCTTTTTAG...AGGATGCAGGAGTAAAGGGATTATAGAATCTTCCTCCAAGGTTAAGAAAAGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| 3UTR CAA 90 bp | CATGTTTCCCACATACAGAGGCACAGATCATACATCTTCACTTCCTaGAATTACATTGGCATAAGCTTTAATTTGCTGAACAAATTCTCC | + |
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Preference number: 2 (lower is better) Translates to: HVSHIQRHRSYIFTS*NYIGISFNLLNKFS Trigger: GGAGAATTTGTTCAGCAAATTAAAGCTTATGCCAATGTAATTCAAGGAAGTGAAGATGTATGATCTGTGCCTCTGTATGTGGGAAACATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| 3UTR-3UTR TCA 90 bp | AGAGAGCATGAGGATCATATCAAAGACAATACTCAACTATGGGATGCTAAAAAGCACTATCAAGTTAAGTaGGTTAAGAAATGCAACCCT | + |
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Preference number: 2 (lower is better) Translates to: REHEDHIKDNTQLWDAKKHYQVK*VKKCNP Trigger: AGGGTTGCATTTCTTAACTCACTTAACTTGATAGTG...CTTTTTAGCATCCCATAGTTGAGTATTGTCTTTGATATGATCCTCATGCTCTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
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| 3UTR-3UTR TCA 90 bp | GAGCATGAGGATCATATCAAAGACAATACTCAACTATGGGATGCTAAAAAGGAATTAACCCTTCAACACTaGAGAAAAGTTTGCCTTGAA | + |
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Preference number: 2 (lower is better) Translates to: EHEDHIKDNTQLWDAKKELTLQH*RKVCLE Trigger: TTCAAGGCAAACTTTTCTTCAGTGTTGAAGGGTTAA...TTCCTTTTTAGCATCCCATAGTTGAGTATTGTCTTTGATATGATCCTCATGCTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
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| 3UTR-3UTR TCA 90 bp | CTTACATGTCTGTCCTCATTCACTTTTCTTAACCTTGGAGGAAGATTCTATAATTTAACCCTTCAACACTaGAGAAAAGTTTGCCTTGAA | + |
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Preference number: 2 (lower is better) Translates to: LTCLSSFTFLNLGGRFYNLTLQH*RKVCLE Trigger: TTCAAGGCAAACTTTTCTTCAGTGTTGAAGGGTTAA...ATTATAGAATCTTCCTCCAAGGTTAAGAAAAGTGAATGAGGACAGACATGTAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| 3UTR-3UTR CCA 90 bp | AGAGAGCATGAGGATCATATCAAAGACAATACTCAACTATGGGATGCTAAAAAGACCTTCCTATGTACATaGATGTTTAACACTTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: REHEDHIKDNTQLWDAKKTFLCT*MFNTSL Trigger: AAGAGAAGTGTTAAACATCCATGTACATAGGAAGGT...CTTTTTAGCATCCCATAGTTGAGTATTGTCTTTGATATGATCCTCATGCTCTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
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| 3UTR-3UTR CCA 90 bp | GTAAAATCTAGGCTTCATCTTCACAATGTCATGTCACAAAGTCACAATGTCACAGACAATACTCAACTATaGGATGCTAAAAAGGAAACT | + |
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Preference number: 2 (lower is better) Translates to: VKSRLHLHNVMSQSHNVTDNTQL*DAKKET Trigger: AGTTTCCTTTTTAGCATCCCATAGTTGAGTATTGTC...TGTGACATTGTGACTTTGTGACATGACATTGTGAAGATGAAGCCTAGATTTTAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| 3UTR GCA 72 bp | CATCATAGCCAGAAGCCTGACAGTAGGCAAGCAGGTTaGCATGGCAATGGGGCAGTTGCTGGAAGCTCATAT | + |
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Preference number: 3 (lower is better) Translates to: HHSQKPDSRQAG*HGNGAVAGSSY Trigger: ATATGAGCTTCCAGCAACTGCCCCATTGCCATGGCAACCTGCTTGCCTACTGTCAGGCTTCTGGCTATGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| 3UTR GCA 72 bp | GTGGGTGGAAGCATTGGGGATTTGCAACCTCAAATTTaGAACCCGGAGTGTCATACCTCCTCAAACAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: VGGSIGDLQPQI*NPECHTSSNKA Trigger: GGCCTTGTTTGAGGAGGTATGACACTCCGGGTTGCAAATTTGAGGTTGCAAATCCCCAATGCTTCCACCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
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| 3UTR GCA 72 bp | CTTCCACATGGGGTGTGGGTGGAAGCATTGGGGATTTaGAACCTCAAATTTGCAACCCGGAGTGTCATACCT | + |
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Preference number: 3 (lower is better) Translates to: LPHGVWVEALGI*NLKFATRSVIP Trigger: AGGTATGACACTCCGGGTTGCAAATTTGAGGTTGCAAATCCCCAATGCTTCCACCCACACCCCATGTGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
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| 3UTR-3UTR CAA 90 bp | CATGACCATCATAGCCAGAAGCCTGACAGTAGGCAAGCAGGTTGCCATGGCAATGGAAGCATTGGGGATTaGCAACCTCAAATTTGCAAC | + |
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Preference number: 3 (lower is better) Translates to: HDHHSQKPDSRQAGCHGNGSIGD*QPQICN Trigger: GTTGCAAATTTGAGGTTGCAAATCCCCAATGCTTCC...ATTGCCATGGCAACCTGCTTGCCTACTGTCAGGCTTCTGGCTATGATGGTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| 3UTR CCA 72 bp | TACTTATACTTCCACATGGGGTGTGGGTGGAAGCATTaGGGATTTGCAACCTCAAATTTGCAACCCGGAGTG | + |
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Preference number: 3 (lower is better) Translates to: YLYFHMGCGWKH*GFATSNLQPGV Trigger: CACTCCGGGTTGCAAATTTGAGGTTGCAAATCCCCAATGCTTCCACCCACACCCCATGTGGAAGTATAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
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| 3UTR-3UTR CAA 90 bp | ATCCATGACCATCATAGCCAGAAGCCTGACAGTAGGCAAGCAGGTTGCCATGGCTATAGGGGAACATTTTaGGGTAAACTACCACATTAC | + |
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Preference number: 3 (lower is better) Translates to: IHDHHSQKPDSRQAGCHGYRGTF*GKLPHY Trigger: GTAATGTGGTAGTTTACCCAAAAATGTTCCCCTATA...GCCATGGCAACCTGCTTGCCTACTGTCAGGCTTCTGGCTATGATGGTCATGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| 3UTR CCA 72 bp | TGCATTTCCCCTGTGCAAGTTGAAAGCTTAGCTGGGTaGTGTCTTGGCCTAGAGCAGAATCTCATTTATTCC | + |
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Preference number: 3 (lower is better) Translates to: CISPVQVESLAG*CLGLEQNLIYS Trigger: GGAATAAATGAGATTCTGCTCTAGGCCAAGACACCACCCAGCTAAGCTTTCAACTTGCACAGGGGAAATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| 3UTR TCA 72 bp | ACAGTCCCGGAATTTGTACTGCACAACCACCATAGCTaGAAGTATGACAGTATGACAGTAAGCAGGCAGCTA | + |
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Preference number: 3 (lower is better) Translates to: TVPEFVLHNHHS*KYDSMTVSRQL Trigger: TAGCTGCCTGCTTACTGTCATACTGTCATACTTTCAGCTATGGTGGTTGTGCAGTACAAATTCCGGGACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| 3UTR TCA 72 bp | TTGAGGAAAATCTTTATGCATTTCCCCTGTGCAAGTTaGAAGCTTAGCTGGGTGGTGTCTTGGCCTAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: LRKIFMHFPCAS*KLSWVVSWPRA Trigger: TGCTCTAGGCCAAGACACCACCCAGCTAAGCTTTCAACTTGCACAGGGGAAATGCATAAAGATTTTCCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| 3UTR GCA 72 bp | ATTGAGACATTTCCAGGCCTCCAAGCAAGGACTCCCTaGTTACATGTCTGTCCTCATTCACTTTTCTTAACC | + |
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Preference number: 3 (lower is better) Translates to: IETFPGLQARTP*LHVCPHSLFLT Trigger: GGTTAAGAAAAGTGAATGAGGACAGACATGTAAGCAGGGAGTCCTTGCTTGGAGGCCTGGAAATGTCTCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| 3UTR GCA 72 bp | AGAACCAGAAGACTGATGCTACCAACTTCTGTTGTCTaGTCAGTGTTGAACTGTCAAGTACATGTTTCCCAC | + |
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Preference number: 3 (lower is better) Translates to: RTRRLMLPTSVV*SVLNCQVHVSH Trigger: GTGGGAAACATGTACTTGACAGTTCAACACTGAGCAGACAACAGAAGTTGGTAGCATCAGTCTTCTGGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| 3UTR CCA 72 bp | AAGAAGGGATTTATCAATTGTGGTCAACAGCTTTCCTaGACCCCACAGAGCTTGCAAGGAGTAACATCAAAA | + |
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Preference number: 3 (lower is better) Translates to: KKGFINCGQQLS*TPQSLQGVTSK Trigger: TTTTGATGTTACTCCTTGCAAGCTCTGTGGGGTCCAGGAAAGCTGTTGACCACAATTGATAAATCCCTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
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| 3UTR-3UTR CAA 90 bp | CAAGTTGAAAGCTTAGCTGGGTGGTGTCTTGGCCTAGAGCAGAATCTCATTTATTCAACTTCTACAACATaGACTACTTTCCCAACTGAG | + |
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Preference number: 3 (lower is better) Translates to: QVESLAGWCLGLEQNLIYSTSTT*TTFPTE Trigger: CTCAGTTGGGAAAGTAGTCAATGTTGTAGAAGTTGA...ATAAATGAGATTCTGCTCTAGGCCAAGACACCACCCAGCTAAGCTTTCAACTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| 3UTR-3UTR CAA 90 bp | TCCAACAAGAGCACTCATTTTAATCTATCCCAAACAGTTCCACCAACCTGGGGCTGTAGTAATAGTTCATaGCACACAGGAGATTTTGTG | + |
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Preference number: 3 (lower is better) Translates to: SNKSTHFNLSQTVPPTWGCSNSS*HTGDFV Trigger: CACAAAATCTCCTGTGTGCAATGAACTATTACTACA...GCCCCAGGTTGGTGGAACTGTTTGGGATAGATTAAAATGAGTGCTCTTGTTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| 3UTR TCA 72 bp | GGAGTCTTTATAGAGGACCTCATTGGAAACTTTTCATaGGGGATTACACAGTCAGAGAGCATGAGGATCATA | + |
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Preference number: 3 (lower is better) Translates to: GVFIEDLIGNFS*GITQSESMRII Trigger: TATGATCCTCATGCTCTCTGACTGTGTAATCCCTCATGAAAAGTTTCCAATGAGGTCCTCTATAAAGACTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
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| 3UTR GCA 72 bp | TCTCTCTCTTGGACTTGTTTCACTCTCTCTATACAGTaGTTCTTGTCAGATATGCCATACTTTTGGCATCTC | + |
|
Preference number: 3 (lower is better) Translates to: SLSWTCFTLSIQ*FLSDMPYFWHL Trigger: GAGATGCCAAAAGTATGGCATATCTGACAAGAAGCACTGTATAGAGAGAGTGAAACAAGTCCAAGAGAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
||
| 3UTR TCA 72 bp | GAAACTTTTCATGAGGGATTACACAGTCAGAGAGCATaGGGATCATATCAAAGACAATACTCAACTATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: ETFHEGLHSQRA*GSYQRQYSTMG Trigger: TCCCATAGTTGAGTATTGTCTTTGATATGATCCTCATGCTCTCTGACTGTGTAATCCCTCATGAAAAGTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
||
| 3UTR GCA 72 bp | GTTTCACTCTCTCTATACAGTGCTTCTTGTCAGATATaGCATACTTTTGGCATCTCCAATATCTTTCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: VSLSLYSASCQI*HTFGISNIFPS Trigger: AGATGGAAAGATATTGGAGATGCCAAAAGTATGGCATATCTGACAAGAAGCACTGTATAGAGAGAGTGAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
||
| 3UTR CCA 72 bp | AGCTTATATTTAATACTTATACTTCCACATGGGGTGTaGGTGGAAGCATTGGGGATTTGCAACCTCAAATTT | + |
|
Preference number: 3 (lower is better) Translates to: SLYLILILPHGV*VEALGICNLKF Trigger: AAATTTGAGGTTGCAAATCCCCAATGCTTCCACCCACACCCCATGTGGAAGTATAAGTATTAAATATAAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
||
| 3UTR-3UTR CAA 90 bp | AGAGAGCATGAGGATCATATCAAAGACAATACTCAACTATGGGATGCTAAAAAGTCAACTTCTACAACATaGACTACTTTCCCAACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: REHEDHIKDNTQLWDAKKSTSTT*TTFPTE Trigger: CTCAGTTGGGAAAGTAGTCAATGTTGTAGAAGTTGA...CTTTTTAGCATCCCATAGTTGAGTATTGTCTTTGATATGATCCTCATGCTCTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
||
| 3UTR CCA 72 bp | GAGCATGAGGATCATATCAAAGACAATACTCAACTATaGGATGCTAAAAAGGAAACTGTGAATAGAACCACA | + |
|
Preference number: 3 (lower is better) Translates to: EHEDHIKDNTQL*DAKKETVNRTT Trigger: TGTGGTTCTATTCACAGTTTCCTTTTTAGCATCCCATAGTTGAGTATTGTCTTTGATATGATCCTCATGCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
||
| 3UTR CCA 72 bp | TCTATACAGTGCTTCTTGTCAGATATGCCATACTTTTaGCATCTCCAATATCTTTCCATCTCCAGTAAAATC | + |
|
Preference number: 3 (lower is better) Translates to: SIQCFLSDMPYF*HLQYLSISSKI Trigger: GATTTTACTGGAGATGGAAAGATATTGGAGATGCCAAAAGTATGGCATATCTGACAAGAAGCACTGTATAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
||
| 3UTR-3UTR CAA 90 bp | GTAAAATCTAGGCTTCATCTTCACAATGTCATGTCACAAAGTCACAATGTCACAGTAGTATTTTGTGTCTaGATTAGGTACAGAGTCATG | + |
|
Preference number: 3 (lower is better) Translates to: VKSRLHLHNVMSQSHNVTVVFCV*IRYRVM Trigger: CATGACTCTGTACCTAATCAAGACACAAAATACTAC...TGTGACATTGTGACTTTGTGACATGACATTGTGAAGATGAAGCCTAGATTTTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
||
| 3UTR-3UTR CAA 90 bp | CTTACATGTCTGTCCTCATTCACTTTTCTTAACCTTGGAGGAAGATTCTATAATTACATCTTCACTTCCTaGAATTACATTGGCATAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LTCLSSFTFLNLGGRFYNYIFTS*NYIGIS Trigger: GCTTATGCCAATGTAATTCAAGGAAGTGAAGATGTA...ATTATAGAATCTTCCTCCAAGGTTAAGAAAAGTGAATGAGGACAGACATGTAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
||
| 3UTR TCA 72 bp | TGGTCACAGTACAGTTTAAAAGTCCAAAGTCTCTTATaGGACTCAAGACAATCTTTCAATTGTAACTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: WSQYSLKVQSLL*DSRQSFNCNSF Trigger: GAAGGAGTTACAATTGAAAGATTGTCTTGAGTCTCATAAGAGACTTTGGACTTTTAAACTGTACTGTGACCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
||
| CDS-3UTR CCA 90 bp | ACAAGGCCACAGGTCCTAATCCTGCCCAAACAATTCCAACAATTAGGGGTAAGCGGAACCACAGCACTGTaGCATTTCCAACCAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TRPQVLILPKQFQQLGVSGTTAL*HFQPAQ Trigger: TTGGGCTGGTTGGAAATGCCACAGTGCTGTGGTTCC...GCTTACCCCTAATTGTTGGAATTGTTTGGGCAGGATTAGGACCTGTGGCCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
||
| CDS-3UTR TCA 90 bp | ATCCATGACCATCATAGCCAGAAGCCTGACAGTAGGCAAGCAGGTTGCCATGGCCACGACTTCACAAAATaGCATTCCAGTATGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IHDHHSQKPDSRQAGCHGHDFTK*HSSMVA Trigger: AGCAACCATACTGGAATGTCATTTTGTGAAGTCGTG...GCCATGGCAACCTGCTTGCCTACTGTCAGGCTTCTGGCTATGATGGTCATGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
||
| CDS-3UTR TCA 90 bp | TGGTGTCTTGGCCTAGAGCAGAATCTCATTTATTCCATTTCCCATCAGGACCTTACCAAATGGGCCACATaGCAGACAGGCAACGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: WCLGLEQNLIYSISHQDLTKWAT*QTGNVQ Trigger: TTGAACGTTGCCTGTCTGTCATGTGGCCCATTTGGT...AAGGTCCTGATGGGAAATGGAATAAATGAGATTCTGCTCTAGGCCAAGACACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
||
| CDS-3UTR TCA 90 bp | TCTTCTGAAGAAGGGATTTATCAATTGTGGTCAACAGCTTTCCTGGACCCCACAAAAGCAGGGTACATATaGCAGCTGATGTGTGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSEEGIYQLWSTAFLDPTKAGYI*QLMCAL Trigger: CAAGGCACACATCAGCTGTCATATGTACCCTGCTTT...TGTGGGGTCCAGGAAAGCTGTTGACCACAATTGATAAATCCCTTCTTCAGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
||
| CDS-3UTR CCA 90 bp | GCCCAAACAATTCCAACAATTAGGGGTAAGCCTATGGTAGCCATTTTCATTCAAGGAACCACAGCACTGTaGCATTTCCAACCAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: AQTIPTIRGKPMVAIFIQGTTAL*HFQPAQ Trigger: TTGGGCTGGTTGGAAATGCCACAGTGCTGTGGTTCC...TTGAATGAAAATGGCTACCATAGGCTTACCCCTAATTGTTGGAATTGTTTGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
||
| CDS-3UTR CCA 90 bp | CATGACCATCATAGCCAGAAGCCTGACAGTAGGCAAGCAGGTTGCCATGGCAATCAATTTCAATGGGGATaGAATCAATGTCCAAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: HDHHSQKPDSRQAGCHGNQFQWG*NQCPRS Trigger: TGATCTTGGACATTGATTCCATCCCCATTGAAATTG...ATTGCCATGGCAACCTGCTTGCCTACTGTCAGGCTTCTGGCTATGATGGTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
||
| CDS-3UTR TCA 90 bp | ACTGTGAATAGAACCACAGAGGACACTGCACCTTCCTATGTACATGGATGTTTATTCTCTAGATCTTCCTaGGGAACCCATCTCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: TVNRTTEDTAPSYVHGCLFSRSS*GTHLST Trigger: TGTGGAGAGATGGGTTCCTCAGGAAGATCTAGAGAA...TAAACATCCATGTACATAGGAAGGTGCAGTGTCCTCTGTGGTTCTATTCACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
||
| 3UTR CAA 72 bp | AGACTGATGCTACCAACTTCTGTTGTCTGCTCAGTGTaGAACTGTCAAGTACATGTTTCCCACATACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLMLPTSVVCSV*NCQVHVSHIQR Trigger: CCTCTGTATGTGGGAAACATGTACTTGACAGTTCAACACTGAGCAGACAACAGAAGTTGGTAGCATCAGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
||
| CDS-3UTR TCA 90 bp | TGGTGTCTTGGCCTAGAGCAGAATCTCATTTATTCCATTTCCCATCAGGACCTTTTTCATTCACAGCTGTaGTGTTTGTTCCCCAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: WCLGLEQNLIYSISHQDLFHSQL*CLFPSM Trigger: CATACTGGGGAACAAACATCACAGCTGTGAATGAAA...AAGGTCCTGATGGGAAATGGAATAAATGAGATTCTGCTCTAGGCCAAGACACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
||
| CDS-3UTR TCA 90 bp | TCTTCTGAAGAAGGGATTTATCAATTGTGGTCAACAGCTTTCCTGGACCCCACATCTGCAGAAATAGCTTaGGAGTCTTCCGTTGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: SSEEGIYQLWSTAFLDPTSAEIA*ESSVEI Trigger: GATTTCAACGGAAGACTCTCAAGCTATTTCTGCAGA...TGTGGGGTCCAGGAAAGCTGTTGACCACAATTGATAAATCCCTTCTTCAGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
||
| CDS-3UTR GCA 90 bp | TGGTGTCTTGGCCTAGAGCAGAATCTCATTTATTCCATTTCCCATCAGGACCTTGATGTAAACAGAGAATaGATTCCTGCGCATCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WCLGLEQNLIYSISHQDLDVNRE*IPAHLE Trigger: TTCCAGATGCGCAGGAATGCATTCTCTGTTTACATC...AAGGTCCTGATGGGAAATGGAATAAATGAGATTCTGCTCTAGGCCAAGACACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
||
| CDS-3UTR CCA 90 bp | TGGTGTCTTGGCCTAGAGCAGAATCTCATTTATTCCATTTCCCATCAGGACCTTGGGAAAGAAAAACCATaGTACAAGACACGACTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: WCLGLEQNLIYSISHQDLGKEKP*YKTRLH Trigger: GTGAAGTCGTGTCTTGTACCATGGTTTTTCTTTCCC...AAGGTCCTGATGGGAAATGGAATAAATGAGATTCTGCTCTAGGCCAAGACACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
||
| CDS-3UTR TCA 90 bp | GCCCAAACAATTCCAACAATTAGGGGTAAGCCTATGGTAGCCATTTTCATTCAACAACTAGGGCAACAATaGGGGAAAGAAAAACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: AQTIPTIRGKPMVAIFIQQLGQQ*GKEKPW Trigger: CCATGGTTTTTCTTTCCCTCATTGTTGCCCTAGTTG...TTGAATGAAAATGGCTACCATAGGCTTACCCCTAATTGTTGGAATTGTTTGGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
||
| CDS-3UTR TCA 90 bp | GCTAAAAAGGAAACTGTGAATAGAACCACAGAGGACACTGCACCTTCCTATGTACTACAAGGCAATAAATaGTGGGTTTTGCAGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AKKETVNRTTEDTAPSYVLQGNK*WVLQSC Trigger: ACAGCTCTGCAAAACCCATCATTTATTGCCTTGTAG...TACATAGGAAGGTGCAGTGTCCTCTGTGGTTCTATTCACAGTTTCCTTTTTAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
||
| CDS-3UTR GCA 90 bp | GCCCAAACAATTCCAACAATTAGGGGTAAGCCTATGGTAGCCATTTTCATTCAATCTTGCATGGCTCTCTaGAGAAATAGCTTGAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: AQTIPTIRGKPMVAIFIQSCMAL*RNSLRV Trigger: GACTCTCAAGCTATTTCTGCAGAGAGCCATGCAAGA...TTGAATGAAAATGGCTACCATAGGCTTACCCCTAATTGTTGGAATTGTTTGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
||
| CDS-3UTR TCA 90 bp | GAGAGCATGAGGATCATATCAAAGACAATACTCAACTATGGGATGCTAAAAAGGCAACTAGGGCAACAATaGGGGAAAGAAAAACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: ESMRIISKTILNYGMLKRQLGQQ*GKEKPW Trigger: CCATGGTTTTTCTTTCCCTCATTGTTGCCCTAGTTG...CCTTTTTAGCATCCCATAGTTGAGTATTGTCTTTGATATGATCCTCATGCTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
||
| CDS-3UTR CCA 90 bp | GTAAAATCTAGGCTTCATCTTCACAATGTCATGTCACAAAGTCACAATGTCACATCACTAAGGCCAGACTaGATCCCAAGAGAGCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: VKSRLHLHNVMSQSHNVTSLRPD*IPRELQ Trigger: TTGTAGCTCTCTTGGGATCCAGTCTGGCCTTAGTGA...TGTGACATTGTGACTTTGTGACATGACATTGTGAAGATGAAGCCTAGATTTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
||
| CDS-3UTR CCA 90 bp | AGAGAGCATGAGGATCATATCAAAGACAATACTCAACTATGGGATGCTAAAAAGTGGCCACATACAGCCTaGTCACAGGAATCTTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: REHEDHIKDNTQLWDAKKWPHTA*SQESCV Trigger: TACACAAGATTCCTGTGACCAGGCTGTATGTGGCCA...CTTTTTAGCATCCCATAGTTGAGTATTGTCTTTGATATGATCCTCATGCTCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
||
| CDS-3UTR TCA 90 bp | CTTACATGTCTGTCCTCATTCACTTTTCTTAACCTTGGAGGAAGATTCTATAATTTCTCTAGATCTTCCTaGGGAACCCATCTCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LTCLSSFTFLNLGGRFYNFSRSS*GTHLST Trigger: TGTGGAGAGATGGGTTCCTCAGGAAGATCTAGAGAA...ATTATAGAATCTTCCTCCAAGGTTAAGAAAAGTGAATGAGGACAGACATGTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
||
| CDS-3UTR GCA 90 bp | GAGAGCATGAGGATCATATCAAAGACAATACTCAACTATGGGATGCTAAAAAGGGATGTAAACAGAGAATaGATTCCTGCGCATCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ESMRIISKTILNYGMLKRDVNRE*IPAHLE Trigger: TTCCAGATGCGCAGGAATGCATTCTCTGTTTACATC...CCTTTTTAGCATCCCATAGTTGAGTATTGTCTTTGATATGATCCTCATGCTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
||
| CDS-3UTR CCA 90 bp | GCCCAAACAATTCCAACAATTAGGGGTAAGCCTATGGTAGCCATTTTCATTCAAACAGATCAATTTCAATaGGGATGGAATCAATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AQTIPTIRGKPMVAIFIQTDQFQ*GWNQCP Trigger: TGGACATTGATTCCATCCCCATTGAAATTGATCTGT...TTGAATGAAAATGGCTACCATAGGCTTACCCCTAATTGTTGGAATTGTTTGGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
||
| 3UTR CAA 72 bp | GTTGGTAAAACCCTGAGCAAGATAGCTGCAGAAATGTaGTACCCAGTATTTGTAACAAGTCCAATATCAATC | + |
|
Preference number: 4 (lower is better) Translates to: VGKTLSKIAAEM*YPVFVTSPISI Trigger: GATTGATATTGGACTTGTTACAAATACTGGGTACAACATTTCTGCAGCTATCTTGCTCAGGGTTTTACCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
||
| 3UTR CAA 72 bp | TCTTGGACTTGTTTCACTCTCTCTATACAGTGCTTCTaGTCAGATATGCCATACTTTTGGCATCTCCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: SWTCFTLSIQCF*SDMPYFWHLQY Trigger: ATATTGGAGATGCCAAAAGTATGGCATATCTGACAAGAAGCACTGTATAGAGAGAGTGAAACAAGTCCAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
||
| CDS-3UTR TCA 90 bp | GTAAAATCTAGGCTTCATCTTCACAATGTCATGTCACAAAGTCACAATGTCACACAATTTGAAAGCAAATaGAGAGAAAGTCAGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: VKSRLHLHNVMSQSHNVTQFESK*RESQHQ Trigger: CTGGTGCTGACTTTCTCTTCATTTGCTTTCAAATTG...TGTGACATTGTGACTTTGTGACATGACATTGTGAAGATGAAGCCTAGATTTTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
||
| CDS-3UTR TCA 90 bp | CTTACATGTCTGTCCTCATTCACTTTTCTTAACCTTGGAGGAAGATTCTATAATTCTGCAGAAATAGCTTaGGAGTCTTCCGTTGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: LTCLSSFTFLNLGGRFYNSAEIA*ESSVEI Trigger: GATTTCAACGGAAGACTCTCAAGCTATTTCTGCAGA...ATTATAGAATCTTCCTCCAAGGTTAAGAAAAGTGAATGAGGACAGACATGTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
||
| CDS-3UTR CCA 90 bp | AATGAATGTTTACATGACCTGATGTATAGGTTAGTATGTTCAACGACAACAACCGGGAAAGAAAAACCATaGTACAAGACACGACTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NECLHDLMYRLVCSTTTTGKEKP*YKTRLH Trigger: GTGAAGTCGTGTCTTGTACCATGGTTTTTCTTTCCC...GGTTGTTGTCGTTGAACATACTAACCTATACATCAGGTCATGTAAACATTCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
||
| 3UTR CAA 72 bp | TCTACAACATTGACTACTTTCCCAACTGAGTTAACCTaGGGTCATCAACTAAACAACGTTATGAAAATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: STTLTTFPTELT*GHQLNNVMKMQ Trigger: TTGCATTTTCATAACGTTGTTTAGTTGATGACCCAAGGTTAACTCAGTTGGGAAAGTAGTCAATGTTGTAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
||
| CDS-3UTR CAA 90 bp | CATGACCATCATAGCCAGAAGCCTGACAGTAGGCAAGCAGGTTGCCATGGCAATCCCAGTATGTTATGTTaGAATCCACTCTTAGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: HDHHSQKPDSRQAGCHGNPSMLC*NPLLDP Trigger: GGGATCTAAGAGTGGATTCAAACATAACATACTGGG...ATTGCCATGGCAACCTGCTTGCCTACTGTCAGGCTTCTGGCTATGATGGTCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
||
| CDS TCA 90 bp | AGCTCTCAGTCCTTTCCAGATTGTTTTTATTTCTCTAGATCTTCCTaGGGAACCCATCTCTCCACATTCTTCCTCCTCAGGAGTGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSQSFPDCFYFSRSS*GTHLSTFFLLRSVL Trigger: CAAGACACTCCTGAGGAGGAAGAATGTGGAGAGATGGGTTCCTCAGGAAGATCTAGAGAAATAAAAACAATCTGGAAAGGACTGAGAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
||
| CDS-3UTR CAA 90 bp | GTAAAATCTAGGCTTCATCTTCACAATGTCATGTCACAAAGTCACAATGTCACACTCCTCAGGAGTGTCTaGCATGGCTCTCTGCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: VKSRLHLHNVMSQSHNVTLLRSV*HGSLQK Trigger: TTTCTGCAGAGAGCCATGCAAGACACTCCTGAGGAG...TGTGACATTGTGACTTTGTGACATGACATTGTGAAGATGAAGCCTAGATTTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
||
| CDS-3UTR CAA 90 bp | AATGAATGTTTACATGACCTGATGTATAGGTTAGTATGTTCAACGACAACAACCCTCCTCAGGAGTGTCTaGCATGGCTCTCTGCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: NECLHDLMYRLVCSTTTTLLRSV*HGSLQK Trigger: TTTCTGCAGAGAGCCATGCAAGACACTCCTGAGGAG...GGTTGTTGTCGTTGAACATACTAACCTATACATCAGGTCATGTAAACATTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
||
| CDS TCA 90 bp | AATGAGGGAAAGAAAAACCATGGTACAAGACACGACTTCACAAAATaGCATTCCAGTATGGTTGCTTTCATTCACAGCTGTGATGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: NEGKKNHGTRHDFTK*HSSMVAFIHSCDVC Trigger: ACAAACATCACAGCTGTGAATGAAAGCAACCATACTGGAATGTCATTTTGTGAAGTCGTGTCTTGTACCATGGTTTTTCTTTCCCTCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
||
| CDS TCA 90 bp | CTTCACAAAATGACATTCCAGTATGGTTGCTTTCATTCACAGCTGTaGTGTTTGTTCCCCAGTATGTTATGTTTGAATCCACTCTTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LHKMTFQYGCFHSQL*CLFPSMLCLNPLLD Trigger: ATCTAAGAGTGGATTCAAACATAACATACTGGGGAACAAACATCACAGCTGTGAATGAAAGCAACCATACTGGAATGTCATTTTGTGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
||
| CDS CAA 72 bp | AACACAATGGCCACATACAGCCTGGTCACAGGAATCTaGTGTAAGCCCCAGAAGATGGTAATCACTAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: NTMATYSLVTGI*CKPQKMVITKA Trigger: GGCCTTAGTGATTACCATCTTCTGGGGCTTACACAAGATTCCTGTGACCAGGCTGTATGTGGCCATTGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
||
| CDS TCA 72 bp | CTGTGGCATTTCCAACCAGCCCAACTAGGGCAACAATaGGGGAAAGAAAAACCATGGTACAAGACACGACTT | + |
|
Preference number: 6 (lower is better) Translates to: LWHFQPAQLGQQ*GKEKPWYKTRL Trigger: AAGTCGTGTCTTGTACCATGGTTTTTCTTTCCCTCATTGTTGCCCTAGTTGGGCTGGTTGGAAATGCCACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098433.5 ENSMUST00000186394.2 |
||
| CDS CAA 72 bp | CAAGACACGACTTCACAAAATGACATTCCAGTATGGTaGCTTTCATTCACAGCTGTGATGTTTGTTCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QDTTSQNDIPVW*LSFTAVMFVPQ Trigger: CTGGGGAACAAACATCACAGCTGTGAATGAAAGCAACCATACTGGAATGTCATTTTGTGAAGTCGTGTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| CDS CCA 72 bp | GTACAAGACACGACTTCACAAAATGACATTCCAGTATaGTTGCTTTCATTCACAGCTGTGATGTTTGTTCCC | + |
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Preference number: 6 (lower is better) Translates to: VQDTTSQNDIPV*LLSFTAVMFVP Trigger: GGGAACAAACATCACAGCTGTGAATGAAAGCAACCATACTGGAATGTCATTTTGTGAAGTCGTGTCTTGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| CDS CAA 90 bp | ACCATGGTACAAGACACGACTTCACAAAATGACATTCCAGTATGGTaGCTTTCATTCACAGCTGTGATGTTTGTTCCCCAGTATGTTATG | + |
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Preference number: 6 (lower is better) Translates to: TMVQDTTSQNDIPVW*LSFTAVMFVPQYVM Trigger: CATAACATACTGGGGAACAAACATCACAGCTGTGAATGAAAGCAACCATACTGGAATGTCATTTTGTGAAGTCGTGTCTTGTACCATGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| CDS TCA 72 bp | ATGACATTCCAGTATGGTTGCTTTCATTCACAGCTGTaGTGTTTGTTCCCCAGTATGTTATGTTTGAATCCA | + |
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Preference number: 6 (lower is better) Translates to: MTFQYGCFHSQL*CLFPSMLCLNP Trigger: TGGATTCAAACATAACATACTGGGGAACAAACATCACAGCTGTGAATGAAAGCAACCATACTGGAATGTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| CDS TCA 72 bp | AAGAAAAACCATGGTACAAGACACGACTTCACAAAATaGCATTCCAGTATGGTTGCTTTCATTCACAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: KKNHGTRHDFTK*HSSMVAFIHSC Trigger: ACAGCTGTGAATGAAAGCAACCATACTGGAATGTCATTTTGTGAAGTCGTGTCTTGTACCATGGTTTTTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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| CDS CCA 72 bp | AGTTTAACACAACAAGGTAAAACAGATCAATTTCAATaGGGATGGAATCAATGTCCAAGATCATGTGAAAAC | + |
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Preference number: 6 (lower is better) Translates to: SLTQQGKTDQFQ*GWNQCPRSCEN Trigger: GTTTTCACATGATCTTGGACATTGATTCCATCCCCATTGAAATTGATCTGTTTTACCTTGTTGTGTTAAACT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098433.5 |
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