Pregenerated sensors for MRGPRH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059408Ensembl transcript IDs: ENSMUST00000075296.4
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CATAGTGAGCCACCAGGTGGGAACATAGAGAAGGGCTTTCATAATAGTGTATCCGTCCCAGGGAACAAATaGCCAGGGAGACTAAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: HSEPPGGNIEKGFHNSVSVPGNK*PGRLRS Trigger: ACTTCTTAGTCTCCCTGGTCATTTGTTCCCTGGGAC...GGATACACTATTATGAAAGCCCTTCTCTATGTTCCCACCTGGTGGCTCACTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075296.4 |
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| CDS-3UTR CCA 90 bp | GAGCCACCAGGTGGGAACATAGAGAAGGGCTTTCATAATAGTGTATCCACAGAGGGGTTTTGTTTCTGGTaGGTTGTGTGGATTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: EPPGGNIEKGFHNSVSTEGFCFW*VVWIPE Trigger: CTCTGGAATCCACACAACCCACCAGAAACAAAACCC...CTCTGTGGATACACTATTATGAAAGCCCTTCTCTATGTTCCCACCTGGTGGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075296.4 |
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| CDS-3UTR CCA 90 bp | GGAGGAATGAAAGACTTTAATCATAGTGAGCCACCAGGTGGGAACATAGAGAAGCCAGGTGGTTTCATTTaGGGTTTTGTTTCTGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: GGMKDFNHSEPPGGNIEKPGGFI*GFVSGG Trigger: CCCACCAGAAACAAAACCCCAAATGAAACCACCTGG...CTTCTCTATGTTCCCACCTGGTGGCTCACTATGATTAAAGTCTTTCATTCCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075296.4 |
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| CDS-3UTR CCA 90 bp | GGAGGAATGAAAGACTTTAATCATAGTGAGCCACCAGGTGGGAACATAGAGAAGTTGGGGTTTTGTTTCTaGTGGGTTGTGTGGATTCCA | + |
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Preference number: 4 (lower is better) Translates to: GGMKDFNHSEPPGGNIEKLGFCF*WVVWIP Trigger: TGGAATCCACACAACCCACCAGAAACAAAACCCCAA...CTTCTCTATGTTCCCACCTGGTGGCTCACTATGATTAAAGTCTTTCATTCCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075296.4 |
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| CDS-3UTR CCA 90 bp | GACTTTAATCATAGTGAGCCACCAGGTGGGAACATAGAGAAGGGCTTTCATAATACACCTTCATGGGCATaGCGAAGACAAGAAACAGGA | + |
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Preference number: 4 (lower is better) Translates to: DFNHSEPPGGNIEKGFHNTPSWA*RRQETG Trigger: TCCTGTTTCTTGTCTTCGCCATGCCCATGAAGGTGT...ATTATGAAAGCCCTTCTCTATGTTCCCACCTGGTGGCTCACTATGATTAAAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075296.4 |
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| CDS-3UTR GCA 90 bp | GGTGGGAACATAGAGAAGGGCTTTCATAATAGTGTATCCACAGAGGATAACATCTCCTCGAAGACTTTCTaGAGTGCTTCTTTTAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: GGNIEKGFHNSVSTEDNISSKTF*SASFRD Trigger: GTCCCTAAAAGAAGCACTGCAGAAAGTCTTCGAGGA...GATGTTATCCTCTGTGGATACACTATTATGAAAGCCCTTCTCTATGTTCCCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075296.4 |
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| CDS-3UTR CCA 90 bp | GACTTTAATCATAGTGAGCCACCAGGTGGGAACATAGAGAAGGGCTTTCATAATGCTCTGAAGACCAGGTaGTTTCATTTGGGGTTTTGT | + |
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Preference number: 4 (lower is better) Translates to: DFNHSEPPGGNIEKGFHNALKTR*FHLGFC Trigger: ACAAAACCCCAAATGAAACCACCTGGTCTTCAGAGC...ATTATGAAAGCCCTTCTCTATGTTCCCACCTGGTGGCTCACTATGATTAAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075296.4 |
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| CDS CCA 90 bp | CCTACTCCTCTTCCTCCTCAGGCTGCCTACCACAAAGTAGACAATTaGGTTGATGCTGCAGTTTATAGTGGACAGCATGTTCAGGTAGGG | + |
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Preference number: 5 (lower is better) Translates to: PTPLPPQAAYHKVDN*VDAAVYSGQHVQVG Trigger: CCCTACCTGAACATGCTGTCCACTATAAACTGCAGCATCAACCCAATTGTCTACTTTGTGGTAGGCAGCCTGAGGAGGAAGAGGAGTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075296.4 |
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| CDS CCA 90 bp | CCGTATGCTCTGAAGACCAGGTGGTTTCATTTGGGGTTTTGTTTCTaGTGGGTTGTGTGGATTCCAGAGGATACAAGGTCATTGCCAATG | + |
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Preference number: 5 (lower is better) Translates to: PYALKTRWFHLGFCF*WVVWIPEDTRSLPM Trigger: CATTGGCAATGACCTTGTATCCTCTGGAATCCACACAACCCACCAGAAACAAAACCCCAAATGAAACCACCTGGTCTTCAGAGCATACGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075296.4 |
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| CDS-3UTR CAA 90 bp | GGTGGGAACATAGAGAAGGGCTTTCATAATAGTGTATCCACAGAGGATAACATCCTGGTGTTTTGGGCGTaGGCACTGGTACCAGATTGG | + |
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Preference number: 5 (lower is better) Translates to: GGNIEKGFHNSVSTEDNILVFWA*ALVPDW Trigger: CCAATCTGGTACCAGTGCCAACGCCCAAAACACCAG...GATGTTATCCTCTGTGGATACACTATTATGAAAGCCCTTCTCTATGTTCCCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075296.4 |
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| CDS CCA 90 bp | AGACTAAGAAGTAAGTGTGGTCATCCGTATGCTCTGAAGACCAGGTaGTTTCATTTGGGGTTTTGTTTCTGGTGGGTTGTGTGGATTCCA | + |
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Preference number: 5 (lower is better) Translates to: RLRSKCGHPYALKTR*FHLGFCFWWVVWIP Trigger: TGGAATCCACACAACCCACCAGAAACAAAACCCCAAATGAAACCACCTGGTCTTCAGAGCATACGGATGACCACACTTACTTCTTAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075296.4 |
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| CDS CCA 90 bp | GTCAAGATACAGGAGAATATGTACACGTATCGGCATTCTGGGAATTaGGGCTTCACTTCCAGAATGCAGAAGAAGTTTTCCAAACCAGAC | + |
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Preference number: 5 (lower is better) Translates to: VKIQENMYTYRHSGN*GFTSRMQKKFSKPD Trigger: GTCTGGTTTGGAAAACTTCTTCTGCATTCTGGAAGTGAAGCCCCAATTCCCAGAATGCCGATACGTGTACATATTCTCCTGTATCTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075296.4 |
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| CDS-3UTR CAA 90 bp | GGAGGAATGAAAGACTTTAATCATAGTGAGCCACCAGGTGGGAACATAGAGAAGTTTGTTTCTGGTGGGTaGTGTGGATTCCAGAGGATA | + |
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Preference number: 5 (lower is better) Translates to: GGMKDFNHSEPPGGNIEKFVSGG*CGFQRI Trigger: TATCCTCTGGAATCCACACAACCCACCAGAAACAAA...CTTCTCTATGTTCCCACCTGGTGGCTCACTATGATTAAAGTCTTTCATTCCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075296.4 |
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| CDS-3UTR CAA 90 bp | GACTTTAATCATAGTGAGCCACCAGGTGGGAACATAGAGAAGGGCTTTCATAATACCAGGTGGTTTCATTaGGGGTTTTGTTTCTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: DFNHSEPPGGNIEKGFHNTRWFH*GFCFWW Trigger: CCACCAGAAACAAAACCCCAAATGAAACCACCTGGT...ATTATGAAAGCCCTTCTCTATGTTCCCACCTGGTGGCTCACTATGATTAAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075296.4 |
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| CDS CCA 90 bp | CAGGAAAGTCAAGATACAGGAGAATATGTACACGTATCGGCATTCTaGGAATTGGGGCTTCACTTCCAGAATGCAGAAGAAGTTTTCCAA | + |
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Preference number: 5 (lower is better) Translates to: QESQDTGEYVHVSAF*ELGLHFQNAEEVFQ Trigger: TTGGAAAACTTCTTCTGCATTCTGGAAGTGAAGCCCCAATTCCCAGAATGCCGATACGTGTACATATTCTCCTGTATCTTGACTTTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075296.4 |
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| CDS-3UTR CAA 90 bp | ATGAAAGACTTTAATCATAGTGAGCCACCAGGTGGGAACATAGAGAAGGGCTTTGTTTCATTTGGGGTTTaGTTTCTGGTGGGTTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: MKDFNHSEPPGGNIEKGFVSFGV*FLVGCV Trigger: CACACAACCCACCAGAAACAAAACCCCAAATGAAAC...AAAGCCCTTCTCTATGTTCCCACCTGGTGGCTCACTATGATTAAAGTCTTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075296.4 |
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| CDS-3UTR CAA 90 bp | GACTTTAATCATAGTGAGCCACCAGGTGGGAACATAGAGAAGGGCTTTCATAATGTGAATGGCTTCCTCTaGATACAGAAGATTAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: DFNHSEPPGGNIEKGFHNVNGFL*IQKIRN Trigger: GTTCCTAATCTTCTGTATCAAGAGGAAGCCATTCAC...ATTATGAAAGCCCTTCTCTATGTTCCCACCTGGTGGCTCACTATGATTAAAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075296.4 |
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| CDS CCA 72 bp | CCACAGCAGCATACAGGCCACAGCGGACTGGTGTTTTaGGCGTTGGCACTGGTACCAGATTGGATAAAGCAC | + |
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Preference number: 6 (lower is better) Translates to: PQQHTGHSGLVF*ALALVPDWIKH Trigger: GTGCTTTATCCAATCTGGTACCAGTGCCAACGCCCAAAACACCAGTCCGCTGTGGCCTGTATGCTGCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075296.4 |
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| CDS CAA 72 bp | CAGCATACAGGCCACAGCGGACTGGTGTTTTGGGCGTaGGCACTGGTACCAGATTGGATAAAGCACGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: QHTGHSGLVFWA*ALVPDWIKHGE Trigger: CTCTCCGTGCTTTATCCAATCTGGTACCAGTGCCAACGCCCAAAACACCAGTCCGCTGTGGCCTGTATGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075296.4 |
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| CDS CAA 72 bp | CCCACAGCAGCATACAGGCCACAGCGGACTGGTGTTTaGGGCGTTGGCACTGGTACCAGATTGGATAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: PTAAYRPQRTGV*GVGTGTRLDKA Trigger: TGCTTTATCCAATCTGGTACCAGTGCCAACGCCCAAAACACCAGTCCGCTGTGGCCTGTATGCTGCTGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075296.4 |
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| CDS GCA 72 bp | CTCGAGGCCACCACTGGCTTTTCCTCGAAGACTTTCTaGAGTGCTTCTTTTAGGGACTTCCTACTCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LEATTGFSSKTF*SASFRDFLLLF Trigger: GAAGAGGAGTAGGAAGTCCCTAAAAGAAGCACTGCAGAAAGTCTTCGAGGAAAAGCCAGTGGTGGCCTCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075296.4 |
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| CDS CAA 72 bp | GGTCATCCGTATGCTCTGAAGACCAGGTGGTTTCATTaGGGGTTTTGTTTCTGGTGGGTTGTGTGGATTCCA | + |
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Preference number: 6 (lower is better) Translates to: GHPYALKTRWFH*GFCFWWVVWIP Trigger: TGGAATCCACACAACCCACCAGAAACAAAACCCCAAATGAAACCACCTGGTCTTCAGAGCATACGGATGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075296.4 |
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| CDS CAA 90 bp | AGTAAGTGTGGTCATCCGTATGCTCTGAAGACCAGGTGGTTTCATTaGGGGTTTTGTTTCTGGTGGGTTGTGTGGATTCCAGAGGATACA | + |
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Preference number: 6 (lower is better) Translates to: SKCGHPYALKTRWFH*GFCFWWVVWIPEDT Trigger: TGTATCCTCTGGAATCCACACAACCCACCAGAAACAAAACCCCAAATGAAACCACCTGGTCTTCAGAGCATACGGATGACCACACTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075296.4 |
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| CDS GCA 72 bp | ATCGGCATTCTGGGAATTGGGGCTTCACTTCCAGAATaGAGAAGAAGTTTTCCAAACCAGACACGAGAACAG | + |
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Preference number: 6 (lower is better) Translates to: IGILGIGASLPE*RRSFPNQTREQ Trigger: CTGTTCTCGTGTCTGGTTTGGAAAACTTCTTCTGCATTCTGGAAGTGAAGCCCCAATTCCCAGAATGCCGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075296.4 |
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| CDS CAA 72 bp | GTATGCTCTGAAGACCAGGTGGTTTCATTTGGGGTTTaGTTTCTGGTGGGTTGTGTGGATTCCAGAGGATAC | + |
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Preference number: 6 (lower is better) Translates to: VCSEDQVVSFGV*FLVGCVDSRGY Trigger: GTATCCTCTGGAATCCACACAACCCACCAGAAACAAAACCCCAAATGAAACCACCTGGTCTTCAGAGCATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075296.4 |
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| CDS CAA 90 bp | AGTCAAGATACAGGAGAATATGTACACGTATCGGCATTCTGGGAATaGGGGCTTCACTTCCAGAATGCAGAAGAAGTTTTCCAAACCAGA | + |
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Preference number: 6 (lower is better) Translates to: SQDTGEYVHVSAFWE*GLHFQNAEEVFQTR Trigger: TCTGGTTTGGAAAACTTCTTCTGCATTCTGGAAGTGAAGCCCCAATTCCCAGAATGCCGATACGTGTACATATTCTCCTGTATCTTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075296.4 |
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