Pregenerated sensors for MRGPRE (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048965Ensembl transcript IDs: ENSMUST00000054048.10
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCTTCATTTCTGTGCTCCTGGCTAGGCAGGAGCTCAGGCACCTGTaGTGGCCTGCAACCAGGCTGCTTCCTCAGAGAACCCCTGCTAGG | + |
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Preference number: 1 (lower is better) Translates to: PFISVLLARQELRHL*WPATRLLPQRTPAR Trigger: CCTAGCAGGGGTTCTCTGAGGAAGCAGCCTGGTTGCAGGCCACCACAGGTGCCTGAGCTCCTGCCTAGCCAGGAGCACAGAAATGAAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR CCA 90 bp | TTCATTTCTGTGCTCCTGGCTAGGCAGGAGCTCAGGCACCTGTGGTaGCCTGCAACCAGGCTGCTTCCTCAGAGAACCCCTGCTAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: FISVLLARQELRHLW*PATRLLPQRTPARW Trigger: CCACCTAGCAGGGGTTCTCTGAGGAAGCAGCCTGGTTGCAGGCCACCACAGGTGCCTGAGCTCCTGCCTAGCCAGGAGCACAGAAATGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR GCA 90 bp | AACACACACAACCCCAGGCCCTCCACAGAAGCATCACTCTCTGCTTaGCCCTTCCCAGAATCCTCCCAGGGGACACAGCACTGGGTCATC | + |
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Preference number: 1 (lower is better) Translates to: NTHNPRPSTEASLSA*PFPESSQGTQHWVI Trigger: GATGACCCAGTGCTGTGTCCCCTGGGAGGATTCTGGGAAGGGGCAAGCAGAGAGTGATGCTTCTGTGGAGGGCCTGGGGTTGTGTGTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR GCA 90 bp | ACACAACCTGCGTGGGGTGGGGGCAGTGAGTTGCCAATTCCGGGATaGCAGGCAGGGTTCTTCTGTCCGTGTCCAGACTTAGGAGCAAGT | + |
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Preference number: 1 (lower is better) Translates to: TQPAWGGGSELPIPG*QAGFFCPCPDLGAS Trigger: ACTTGCTCCTAAGTCTGGACACGGACAGAAGAACCCTGCCTGGCATCCCGGAATTGGCAACTCACTGCCCCCACCCCACGCAGGTTGTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR GCA 90 bp | CCCTGTCAACAGCTGAAGCTAGCTAGGAGAGGAGTAGAAGGTCTGTaGCATGTCCCGGGTTGTCTCGAGCAGACACGGGCTTCTCTGAGC | + |
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Preference number: 1 (lower is better) Translates to: PCQQLKLARRGVEGL*HVPGCLEQTRASLS Trigger: GCTCAGAGAAGCCCGTGTCTGCTCGAGACAACCCGGGACATGGCACAGACCTTCTACTCCTCTCCTAGCTAGCTTCAGCTGTTGACAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR GCA 90 bp | GAGGGTGTCCATGGAAGCAGCTGTTATGAGGTGGTCCAGGAGCTCTaGCTAACACACACAACCCCAGGCCCTCCACAGAAGCATCACTCT | + |
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Preference number: 1 (lower is better) Translates to: EGVHGSSCYEVVQEL*LTHTTPGPPQKHHS Trigger: AGAGTGATGCTTCTGTGGAGGGCCTGGGGTTGTGTGTGTTAGGCAGAGCTCCTGGACCACCTCATAACAGCTGCTTCCATGGACACCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR GCA 90 bp | TGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGTaGGCGTGCGCGTATTTGGAGTCACACACATGTATGTATGTATGT | + |
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Preference number: 1 (lower is better) Translates to: CGVCVCVCVCARARV*ACAYLESHTCMYVC Trigger: ACATACATACATACATGTGTGTGACTCCAAATACGCGCACGCGCACACGCGCGCGCGCGCACACACACACACACACACACACACACCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR TCA 90 bp | ACAGGCTACTTCCCTTCGTGCTCTCAGTTCCCCAAGCTGAGGAACTaGAGTTGGGAATCCTGTCCTGGAGGCAGACAGATAGCCACATCG | + |
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Preference number: 1 (lower is better) Translates to: TGYFPSCSQFPKLRN*SWESCPGGRQIATS Trigger: CGATGTGGCTATCTGTCTGCCTCCAGGACAGGATTCCCAACTTCAGTTCCTCAGCTTGGGGAACTGAGAGCACGAAGGGAAGTAGCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR TCA 90 bp | GGTCATCAGCAAAGATGTCCCTCAAGAGTCTTACTGATGGAGCTCTaGTCCCAGCTTTACCTACATCAGGCAGCTCCCCTGGACCCCCAT | + |
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Preference number: 1 (lower is better) Translates to: GHQQRCPSRVLLMEL*SQLYLHQAAPLDPH Trigger: ATGGGGGTCCAGGGGAGCTGCCTGATGTAGGTAAAGCTGGGATCAGAGCTCCATCAGTAAGACTCTTGAGGGACATCTTTGCTGATGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR TCA 90 bp | ACAGCGACAGGAGGGGGCTTGCTGCCCATGCAGAGGACCTCACTTTaGAATTCAGACTCAGGAGCCACCAGTTTTTCTGAAACATTGGAT | + |
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Preference number: 1 (lower is better) Translates to: TATGGGLLPMQRTSL*NSDSGATSFSETLD Trigger: ATCCAATGTTTCAGAAAAACTGGTGGCTCCTGAGTCTGAATTTCAAAGTGAGGTCCTCTGCATGGGCAGCAAGCCCCCTCCTGTCGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR TCA 90 bp | GGCAGGAAGCAAGGAGGAAAGCCACCTACTGACTTGCCCCTGGGCTaGTGCTTAGCTAGCTTTTTATATAGCTCAGGTCCATTTGCCTAC | + |
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Preference number: 1 (lower is better) Translates to: GRKQGGKPPTDLPLG*CLASFLYSSGPFAY Trigger: GTAGGCAAATGGACCTGAGCTATATAAAAAGCTAGCTAAGCATCAGCCCAGGGGCAAGTCAGTAGGTGGCTTTCCTCCTTGCTTCCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR TCA 90 bp | TCAGCCGCTGAGAACTTCCAAGCCACTTATTTCCCCATACCTAACTaGATGTCCAGTTTCAGTGTCATTTATCCCTCACTAAAGGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: SAAENFQATYFPIPN*MSSFSVIYPSLKEG Trigger: TCCTTCCTTTAGTGAGGGATAAATGACACTGAAACTGGACATTCAGTTAGGTATGGGGAAATAAGTGGCTTGGAAGTTCTCAGCGGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR GCA 90 bp | CATGCATGTATGTATGTATGTATGTATGTATGTATGTGTACCACATaGATGCAGTGTCTGCAGAAGCCAAAAGACGGAGACAGATCCCCT | + |
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Preference number: 1 (lower is better) Translates to: HACMYVCMYVCMCTT*MQCLQKPKDGDRSP Trigger: AGGGGATCTGTCTCCGTCTTTTGGCTTCTGCAGACACTGCATGCATGTGGTACACATACATACATACATACATACATACATACATGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR CAA 90 bp | ACAGGATGCATCCCAACACAACCTGCGTGGGGTGGGGGCAGTGAGTaGCCAATTCCGGGATGCCAGGCAGGGTTCTTCTGTCCGTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: TGCIPTQPAWGGGSE*PIPGCQAGFFCPCP Trigger: TGGACACGGACAGAAGAACCCTGCCTGGCATCCCGGAATTGGCAACTCACTGCCCCCACCCCACGCAGGTTGTGTTGGGATGCATCCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR-3UTR GCA 90 bp | AGGAGAGGAGTAGAAGGTCTGTGCCATGTCCCGGGTTGTCTCGAGCAGACACGGGGCCTGCAACCAGGCTaGTTCCTCAGAGAACCCCTG | + |
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Preference number: 2 (lower is better) Translates to: RRGVEGLCHVPGCLEQTRGLQPG*FLREPL Trigger: CAGGGGTTCTCTGAGGAAGCAGCCTGGTTGCAGGCC...CCGTGTCTGCTCGAGACAACCCGGGACATGGCACAGACCTTCTACTCCTCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR-3UTR GCA 90 bp | TGTCCCGGGTTGTCTCGAGCAGACACGGGCTTCTCTGAGCCTCAAAGACTCTGGGCACCTGTGGTGGCCTaGAACCAGGCTGCTTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: CPGLSRADTGFSEPQRLWAPVVA*NQAASS Trigger: TGAGGAAGCAGCCTGGTTGCAGGCCACCACAGGTGC...CCAGAGTCTTTGAGGCTCAGAGAAGCCCGTGTCTGCTCGAGACAACCCGGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR-3UTR GCA 90 bp | TGTCCCGGGTTGTCTCGAGCAGACACGGGCTTCTCTGAGCCTCAAAGACTCTGGTCCCCTTCATTTCTGTaGTCCTGGCTAGGCAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: CPGLSRADTGFSEPQRLWSPSFL*SWLGRS Trigger: GCTCCTGCCTAGCCAGGAGCACAGAAATGAAGGGGA...CCAGAGTCTTTGAGGCTCAGAGAAGCCCGTGTCTGCTCGAGACAACCCGGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR CAA 90 bp | GCATGGGCTTTCCCCCATGAAGAAGTGGGTGTCCAGAGGCCAAAATaGGACTTGTGGACAGGCTACTTCCCTTCGTGCTCTCAGTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: AWAFPHEEVGVQRPK*DLWTGYFPSCSQFP Trigger: GGGGAACTGAGAGCACGAAGGGAAGTAGCCTGTCCACAAGTCCAATTTTGGCCTCTGGACACCCACTTCTTCATGGGGGAAAGCCCATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR-3UTR GCA 90 bp | AGGAGAGGAGTAGAAGGTCTGTGCCATGTCCCGGGTTGTCTCGAGCAGACACGGAGAAGCATCACTCTCTaGTTGCCCCTTCCCAGAATC | + |
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Preference number: 2 (lower is better) Translates to: RRGVEGLCHVPGCLEQTRRSITL*LPLPRI Trigger: GATTCTGGGAAGGGGCAAGCAGAGAGTGATGCTTCT...CCGTGTCTGCTCGAGACAACCCGGGACATGGCACAGACCTTCTACTCCTCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR-3UTR CCA 90 bp | TGTCCCGGGTTGTCTCGAGCAGACACGGGCTTCTCTGAGCCTCAAAGACTCTGGAGTTCCCTCTGGGCTTaGTTTCCTGAGATGATGAGT | + |
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Preference number: 2 (lower is better) Translates to: CPGLSRADTGFSEPQRLWSSLWA*FPEMMS Trigger: ACTCATCATCTCAGGAAACCAAGCCCAGAGGGAACT...CCAGAGTCTTTGAGGCTCAGAGAAGCCCGTGTCTGCTCGAGACAACCCGGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR-3UTR CCA 90 bp | AGGAGAGGAGTAGAAGGTCTGTGCCATGTCCCGGGTTGTCTCGAGCAGACACGGCCAAAATTGGACTTGTaGACAGGCTACTTCCCTTCG | + |
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Preference number: 2 (lower is better) Translates to: RRGVEGLCHVPGCLEQTRPKLDL*TGYFPS Trigger: CGAAGGGAAGTAGCCTGTCCACAAGTCCAATTTTGG...CCGTGTCTGCTCGAGACAACCCGGGACATGGCACAGACCTTCTACTCCTCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR-3UTR GCA 90 bp | GACACGGGCTTCTCTGAGCCTCAAAGACTCTGGGCTAGTGCCCAGTTGGGGAGATGTATGTGTACCACATaGATGCAGTGTCTGCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: DTGFSEPQRLWASAQLGRCMCTT*MQCLQK Trigger: CTTCTGCAGACACTGCATGCATGTGGTACACATACA...TCTCCCCAACTGGGCACTAGCCCAGAGTCTTTGAGGCTCAGAGAAGCCCGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR-3UTR CCA 90 bp | TGCTTAGCTAGCTTTTTATATAGCTCAGGTCCATTTGCCTACGGGTGGTTCTGCTGGGCTCCCAAGCCCTaGTTCTCGGCCACCTGTGAC | + |
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Preference number: 2 (lower is better) Translates to: CLASFLYSSGPFAYGWFCWAPKP*FSATCD Trigger: GTCACAGGTGGCCGAGAACCAGGGCTTGGGAGCCCA...GCAGAACCACCCGTAGGCAAATGGACCTGAGCTATATAAAAAGCTAGCTAAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR-3UTR CCA 90 bp | GAAGAAGTGGGTGTCCAGAGGCCAAAATTGGACTTGTGGACAGGCTACTTCCCTCAGGGGACACAGCACTaGGTCATCAGCAAAGATGTC | + |
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Preference number: 2 (lower is better) Translates to: EEVGVQRPKLDLWTGYFPQGTQH*VISKDV Trigger: GACATCTTTGCTGATGACCCAGTGCTGTGTCCCCTG...AGGGAAGTAGCCTGTCCACAAGTCCAATTTTGGCCTCTGGACACCCACTTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR-3UTR CCA 90 bp | GATGAGGTTTATATCCTCCAGTGGTCTCTCTCCTCAACACAGTTCCCTCTGGGCAGTCTCTCAAGTAGCTaGGATGACAGGCCTGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: DEVYILQWSLSSTQFPLGSLSSS*DDRPVP Trigger: TGGCACAGGCCTGTCATCCCAGCTACTTGAGAGACT...GCCCAGAGGGAACTGTGTTGAGGAGAGAGACCACTGGAGGATATAAACCTCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR-3UTR CCA 90 bp | CAGTATTACACCCACACAGATGTCAAAGGAGACCAGCATGTCACGAATGTGGATCTCAGGCACCTGTGGTaGCCTGCAACCAGGCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: QYYTHTDVKGDQHVTNVDLRHLW*PATRLL Trigger: AAGCAGCCTGGTTGCAGGCCACCACAGGTGCCTGAG...ATCCACATTCGTGACATGCTGGTCTCCTTTGACATCTGTGTGGGTGTAATACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR-3UTR CCA 90 bp | GACACGGGCTTCTCTGAGCCTCAAAGACTCTGGGCTAGTGCCCAGTTGGGGAGATACAAAGAACTCCTTTaGAAGAGGAAGACCAGCACT | + |
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Preference number: 2 (lower is better) Translates to: DTGFSEPQRLWASAQLGRYKELL*KRKTST Trigger: AGTGCTGGTCTTCCTCTTCCAAAGGAGTTCTTTGTA...TCTCCCCAACTGGGCACTAGCCCAGAGTCTTTGAGGCTCAGAGAAGCCCGTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR-3UTR GCA 90 bp | AGAAGCCAAAAGACGGAGACAGATCCCCTGGAACTAGAGTTACAGATAAATCCCGGGATGACAGGCCTGTaGCAGCATTGCCTTCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: RSQKTETDPLELELQINPGMTGL*QHCLLA Trigger: TGCCAGAAGGCAATGCTGGCACAGGCCTGTCATCCC...GGGATTTATCTGTAACTCTAGTTCCAGGGGATCTGTCTCCGTCTTTTGGCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR-3UTR CCA 90 bp | TGCTTAGCTAGCTTTTTATATAGCTCAGGTCCATTTGCCTACGGGTGGTTCTGCTCCTTTCAGGACTGGTaGGCTCCCAAGCCCTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: CLASFLYSSGPFAYGWFCSFQDW*APKPWF Trigger: GAACCAGGGCTTGGGAGCCCACCAGTCCTGAAAGGA...GCAGAACCACCCGTAGGCAAATGGACCTGAGCTATATAAAAAGCTAGCTAAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR-3UTR TCA 90 bp | AGAAGCCAAAAGACGGAGACAGATCCCCTGGAACTAGAGTTACAGATAAATCCCCTTCTGGCAGTGATGTaGGGTCAGGAGGATGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: RSQKTETDPLELELQINPLLAVM*GQEDAF Trigger: GAAGGCATCCTCCTGACCTCACATCACTGCCAGAAG...GGGATTTATCTGTAACTCTAGTTCCAGGGGATCTGTCTCCGTCTTTTGGCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR-3UTR GCA 90 bp | CCGCTGAGAACTTCCAAGCCACTTATTTCCCCATACCTAACTGAATGTCCAGTTGTGGTCCAGGAGCTCTaGCTAACACACACAACCCCA | + |
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Preference number: 2 (lower is better) Translates to: PLRTSKPLISPYLTECPVVVQEL*LTHTTP Trigger: TGGGGTTGTGTGTGTTAGGCAGAGCTCCTGGACCAC...AACTGGACATTCAGTTAGGTATGGGGAAATAAGTGGCTTGGAAGTTCTCAGCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR-3UTR TCA 90 bp | TGCTTAGCTAGCTTTTTATATAGCTCAGGTCCATTTGCCTACGGGTGGTTCTGCATTGCCTTCTGGCAGTaGTGTGAGGTCAGGAGGATG | + |
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Preference number: 2 (lower is better) Translates to: CLASFLYSSGPFAYGWFCIAFWQ*CEVRRM Trigger: CATCCTCCTGACCTCACATCACTGCCAGAAGGCAAT...GCAGAACCACCCGTAGGCAAATGGACCTGAGCTATATAAAAAGCTAGCTAAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR-3UTR GCA 90 bp | CTGAATGTCCAGTTTCAGTGTCATTTATCCCTCACTAAAGGAAGGAGCATTGGGGCATCACTCTCTGCTTaGCCCTTCCCAGAATCCTCC | + |
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Preference number: 2 (lower is better) Translates to: LNVQFQCHLSLTKGRSIGASLSA*PFPESS Trigger: GGAGGATTCTGGGAAGGGGCAAGCAGAGAGTGATGC...CCCAATGCTCCTTCCTTTAGTGAGGGATAAATGACACTGAAACTGGACATTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR-3UTR CCA 90 bp | GCCTTTGTGGGGGATACAAAGAACTCCTTTGGAAGAGGAAGACCAGCACTCCCAGTTTATATCCTCCAGTaGTCTCTCTCCTCAACACAG | + |
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Preference number: 2 (lower is better) Translates to: AFVGDTKNSFGRGRPALPVYILQ*SLSSTQ Trigger: CTGTGTTGAGGAGAGAGACCACTGGAGGATATAAAC...TGGGAGTGCTGGTCTTCCTCTTCCAAAGGAGTTCTTTGTATCCCCCACAAAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR-3UTR GCA 90 bp | TGCTTAGCTAGCTTTTTATATAGCTCAGGTCCATTTGCCTACGGGTGGTTCTGCCAGGAGGATGCCTTCTaGCACTTAGGACTTCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: CLASFLYSSGPFAYGWFCQEDAF*HLGLPS Trigger: ACTTGGAAGTCCTAAGTGGCAGAAGGCATCCTCCTG...GCAGAACCACCCGTAGGCAAATGGACCTGAGCTATATAAAAAGCTAGCTAAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR-3UTR CCA 90 bp | TGCTTAGCTAGCTTTTTATATAGCTCAGGTCCATTTGCCTACGGGTGGTTCTGCGCGCGTGCGCGTATTTaGAGTCACACACATGTATGT | + |
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Preference number: 2 (lower is better) Translates to: CLASFLYSSGPFAYGWFCARARI*SHTHVC Trigger: ACATACATGTGTGTGACTCCAAATACGCGCACGCGC...GCAGAACCACCCGTAGGCAAATGGACCTGAGCTATATAAAAAGCTAGCTAAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR-3UTR TCA 90 bp | AGAAGCCAAAAGACGGAGACAGATCCCCTGGAACTAGAGTTACAGATAAATCCCTTCCCCATACCTAACTaGATGTCCAGTTTCAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: RSQKTETDPLELELQINPFPIPN*MSSFSV Trigger: GACACTGAAACTGGACATTCAGTTAGGTATGGGGAA...GGGATTTATCTGTAACTCTAGTTCCAGGGGATCTGTCTCCGTCTTTTGGCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR-3UTR GCA 90 bp | GAAATTCAGACTCAGGAGCCACCAGTTTTTCTGAAACATTGGATGAGGTTTATATGTGTACCACATGCATaGAGTGTCTGCAGAAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: EIQTQEPPVFLKHWMRFICVPHA*SVCRSQ Trigger: TTGGCTTCTGCAGACACTGCATGCATGTGGTACACA...TATAAACCTCATCCAATGTTTCAGAAAAACTGGTGGCTCCTGAGTCTGAATTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR CCA 72 bp | GTGCTCCTGGCTAGGCAGGAGCTCAGGCACCTGTGGTaGCCTGCAACCAGGCTGCTTCCTCAGAGAACCCCT | + |
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Preference number: 3 (lower is better) Translates to: VLLARQELRHLW*PATRLLPQRTP Trigger: AGGGGTTCTCTGAGGAAGCAGCCTGGTTGCAGGCCACCACAGGTGCCTGAGCTCCTGCCTAGCCAGGAGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR CCA 72 bp | TCTGTGCTCCTGGCTAGGCAGGAGCTCAGGCACCTGTaGTGGCCTGCAACCAGGCTGCTTCCTCAGAGAACC | + |
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Preference number: 3 (lower is better) Translates to: SVLLARQELRHL*WPATRLLPQRT Trigger: GGTTCTCTGAGGAAGCAGCCTGGTTGCAGGCCACCACAGGTGCCTGAGCTCCTGCCTAGCCAGGAGCACAGA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR GCA 72 bp | AACCCCAGGCCCTCCACAGAAGCATCACTCTCTGCTTaGCCCTTCCCAGAATCCTCCCAGGGGACACAGCAC | + |
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Preference number: 3 (lower is better) Translates to: NPRPSTEASLSA*PFPESSQGTQH Trigger: GTGCTGTGTCCCCTGGGAGGATTCTGGGAAGGGGCAAGCAGAGAGTGATGCTTCTGTGGAGGGCCTGGGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR GCA 72 bp | GCGTGGGGTGGGGGCAGTGAGTTGCCAATTCCGGGATaGCAGGCAGGGTTCTTCTGTCCGTGTCCAGACTTA | + |
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Preference number: 3 (lower is better) Translates to: AWGGGSELPIPG*QAGFFCPCPDL Trigger: TAAGTCTGGACACGGACAGAAGAACCCTGCCTGGCATCCCGGAATTGGCAACTCACTGCCCCCACCCCACGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR TCA 72 bp | ATGCATCCCAACACAACCTGCGTGGGGTGGGGGCAGTaGGTTGCCAATTCCGGGATGCCAGGCAGGGTTCTT | + |
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Preference number: 3 (lower is better) Translates to: MHPNTTCVGWGQ*VANSGMPGRVL Trigger: AAGAACCCTGCCTGGCATCCCGGAATTGGCAACTCACTGCCCCCACCCCACGCAGGTTGTGTTGGGATGCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR CCA 72 bp | CACCATACCACAGGATGCATCCCAACACAACCTGCGTaGGGTGGGGGCAGTGAGTTGCCAATTCCGGGATGC | + |
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Preference number: 3 (lower is better) Translates to: HHTTGCIPTQPA*GGGSELPIPGC Trigger: GCATCCCGGAATTGGCAACTCACTGCCCCCACCCCACGCAGGTTGTGTTGGGATGCATCCTGTGGTATGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR GCA 72 bp | CAGCTGAAGCTAGCTAGGAGAGGAGTAGAAGGTCTGTaGCATGTCCCGGGTTGTCTCGAGCAGACACGGGCT | + |
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Preference number: 3 (lower is better) Translates to: QLKLARRGVEGL*HVPGCLEQTRA Trigger: AGCCCGTGTCTGCTCGAGACAACCCGGGACATGGCACAGACCTTCTACTCCTCTCCTAGCTAGCTTCAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR CCA 72 bp | GTCTCATGCCTGCTCTGTCCCCTCACTGTAGCCATGTaGGGAGGGAGGGTGTCCATGGAAGCAGCTGTTATG | + |
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Preference number: 3 (lower is better) Translates to: VSCLLCPLTVAM*GGRVSMEAAVM Trigger: CATAACAGCTGCTTCCATGGACACCCTCCCTCCCCACATGGCTACAGTGAGGGGACAGAGCAGGCATGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR CCA 72 bp | TCTCTGAGCCTCAAAGACTCTGGGCTAGTGCCCAGTTaGGGAGACACCTGTAAGGCTGGCATGGGCTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SLSLKDSGLVPS*GDTCKAGMGFP Trigger: GGGAAAGCCCATGCCAGCCTTACAGGTGTCTCCCCAACTGGGCACTAGCCCAGAGTCTTTGAGGCTCAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| 3UTR TCA 72 bp | TGTGGGGAGGGAGGGTGTCCATGGAAGCAGCTGTTATaGGGTGGTCCAGGAGCTCTGCCTAACACACACAAC | + |
|
Preference number: 3 (lower is better) Translates to: CGEGGCPWKQLL*GGPGALPNTHN Trigger: GTTGTGTGTGTTAGGCAGAGCTCCTGGACCACCTCATAACAGCTGCTTCCATGGACACCCTCCCTCCCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| 3UTR GCA 72 bp | CATGGAAGCAGCTGTTATGAGGTGGTCCAGGAGCTCTaGCTAACACACACAACCCCAGGCCCTCCACAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: HGSSCYEVVQEL*LTHTTPGPPQK Trigger: CTTCTGTGGAGGGCCTGGGGTTGTGTGTGTTAGGCAGAGCTCCTGGACCACCTCATAACAGCTGCTTCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| 3UTR GCA 72 bp | TGTGTGTGTGTGTGTGCGCGCGCGCGCGTGTGCGCGTaGGCGTATTTGGAGTCACACACATGTATGTATGTA | + |
|
Preference number: 3 (lower is better) Translates to: CVCVCARARVCA*AYLESHTCMYV Trigger: TACATACATACATGTGTGTGACTCCAAATACGCGCACGCGCACACGCGCGCGCGCGCACACACACACACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| 3UTR-3UTR CAA 90 bp | TGTCCCGGGTTGTCTCGAGCAGACACGGGCTTCTCTGAGCCTCAAAGACTCTGGCTAAAGGAAGGAGCATaGGGCACCGAGAAAAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: CPGLSRADTGFSEPQRLWLKEGA*GTEKSH Trigger: GTGACTTTTCTCGGTGCCCAATGCTCCTTCCTTTAG...CCAGAGTCTTTGAGGCTCAGAGAAGCCCGTGTCTGCTCGAGACAACCCGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| 3UTR TCA 72 bp | ACAGGCCTGTGCCAGCATTGCCTTCTGGCAGTGATGTaGGGTCAGGAGGATGCCTTCTGCCACTTAGGACTT | + |
|
Preference number: 3 (lower is better) Translates to: TGLCQHCLLAVM*GQEDAFCHLGL Trigger: AAGTCCTAAGTGGCAGAAGGCATCCTCCTGACCTCACATCACTGCCAGAAGGCAATGCTGGCACAGGCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| 3UTR CCA 72 bp | TGCCCCTTCCCAGAATCCTCCCAGGGGACACAGCACTaGGTCATCAGCAAAGATGTCCCTCAAGAGTCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: CPFPESSQGTQH*VISKDVPQESY Trigger: GTAAGACTCTTGAGGGACATCTTTGCTGATGACCCAGTGCTGTGTCCCCTGGGAGGATTCTGGGAAGGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| 3UTR TCA 72 bp | GGAGACACCTGTAAGGCTGGCATGGGCTTTCCCCCATaGAGAAGTGGGTGTCCAGAGGCCAAAATTGGACTT | + |
|
Preference number: 3 (lower is better) Translates to: GDTCKAGMGFPP*RSGCPEAKIGL Trigger: AAGTCCAATTTTGGCCTCTGGACACCCACTTCTTCATGGGGGAAAGCCCATGCCAGCCTTACAGGTGTCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| 3UTR CCA 72 bp | GAAGAAGTGGGTGTCCAGAGGCCAAAATTGGACTTGTaGACAGGCTACTTCCCTTCGTGCTCTCAGTTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: EEVGVQRPKLDL*TGYFPSCSQFP Trigger: GGGGAACTGAGAGCACGAAGGGAAGTAGCCTGTCCACAAGTCCAATTTTGGCCTCTGGACACCCACTTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| 3UTR-3UTR CAA 90 bp | GATGAGGTTTATATCCTCCAGTGGTCTCTCTCCTCAACACAGTTCCCTCTGGGCAGCATCACTCTCTGCTaGCCCCTTCCCAGAATCCTC | + |
|
Preference number: 3 (lower is better) Translates to: DEVYILQWSLSSTQFPLGSITLC*PLPRIL Trigger: GAGGATTCTGGGAAGGGGCAAGCAGAGAGTGATGCT...GCCCAGAGGGAACTGTGTTGAGGAGAGAGACCACTGGAGGATATAAACCTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| 3UTR TCA 72 bp | GGAGGGGGCTTGCTGCCCATGCAGAGGACCTCACTTTaGAATTCAGACTCAGGAGCCACCAGTTTTTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: GGGLLPMQRTSL*NSDSGATSFSE Trigger: TTCAGAAAAACTGGTGGCTCCTGAGTCTGAATTTCAAAGTGAGGTCCTCTGCATGGGCAGCAAGCCCCCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| 3UTR TCA 72 bp | TCCATTTGCCTACGGGTGGTTCTGCTCACAGTGGAGTaGGCTCTCCCACATGTATTAGCAGTCAGGACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SICLRVVLLTVE*ALPHVLAVRTV Trigger: CACTGTCCTGACTGCTAATACATGTGGGAGAGCTCACTCCACTGTGAGCAGAACCACCCGTAGGCAAATGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| 3UTR GCA 72 bp | TGCTTTGGATATGGACAGCGACAGGAGGGGGCTTGCTaGCCATGCAGAGGACCTCACTTTGAAATTCAGACT | + |
|
Preference number: 3 (lower is better) Translates to: CFGYGQRQEGAC*PCRGPHFEIQT Trigger: AGTCTGAATTTCAAAGTGAGGTCCTCTGCATGGGCAGCAAGCCCCCTCCTGTCGCTGTCCATATCCAAAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| 3UTR CCA 72 bp | AGGGAAGGCCTTTGTGGGGGATACAAAGAACTCCTTTaGAAGAGGAAGACCAGCACTCCCAAGCTCCTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: REGLCGGYKELL*KRKTSTPKLLA Trigger: AGCTAGGAGCTTGGGAGTGCTGGTCTTCCTCTTCCAAAGGAGTTCTTTGTATCCCCCACAAAGGCCTTCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| 3UTR CCA 72 bp | CTCCTAAGCTCCAGTGTGGAGGAGGGAAGGCCTTTGTaGGGGATACAAAGAACTCCTTTGGAAGAGGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LLSSSVEEGRPL*GIQRTPLEEED Trigger: GTCTTCCTCTTCCAAAGGAGTTCTTTGTATCCCCCACAAAGGCCTTCCCTCCTCCACACTGGAGCTTAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| 3UTR TCA 72 bp | CAAAGATGTCCCTCAAGAGTCTTACTGATGGAGCTCTaGTCCCAGCTTTACCTACATCAGGCAGCTCCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: QRCPSRVLLMEL*SQLYLHQAAPL Trigger: CAGGGGAGCTGCCTGATGTAGGTAAAGCTGGGATCAGAGCTCCATCAGTAAGACTCTTGAGGGACATCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| 3UTR CCA 72 bp | TCCTCCAGTGGTCTCTCTCCTCAACACAGTTCCCTCTaGGCTTGGTTTCCTGAGATGATGAGTCCTCTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SSSGLSPQHSSL*AWFPEMMSPLK Trigger: CTTTAGAGGACTCATCATCTCAGGAAACCAAGCCCAGAGGGAACTGTGTTGAGGAGAGAGACCACTGGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| 3UTR CCA 72 bp | AGTGGTCTCTCTCCTCAACACAGTTCCCTCTGGGCTTaGTTTCCTGAGATGATGAGTCCTCTAAAGCATAAT | + |
|
Preference number: 3 (lower is better) Translates to: SGLSPQHSSLWA*FPEMMSPLKHN Trigger: ATTATGCTTTAGAGGACTCATCATCTCAGGAAACCAAGCCCAGAGGGAACTGTGTTGAGGAGAGAGACCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| 3UTR CCA 72 bp | TTTAGTCATGACAGAGATCAAATGTCCCTCCATCTGTaGGCCTGGTCCAAGTCAGTATTACACCCACACAGA | + |
|
Preference number: 3 (lower is better) Translates to: FSHDRDQMSLHL*AWSKSVLHPHR Trigger: TCTGTGTGGGTGTAATACTGACTTGGACCAGGCCCACAGATGGAGGGACATTTGATCTCTGTCATGACTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| 3UTR CCA 72 bp | TTTTCTGAAACATTGGATGAGGTTTATATCCTCCAGTaGTCTCTCTCCTCAACACAGTTCCCTCTGGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: FSETLDEVYILQ*SLSSTQFPLGL Trigger: CAAGCCCAGAGGGAACTGTGTTGAGGAGAGAGACCACTGGAGGATATAAACCTCATCCAATGTTTCAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| 3UTR CCA 72 bp | TGGATCTGGAGGGTTGATGATGTAATAAAATCCTCTTaGGACTTGCTGGACACAACAACACTGTGCGTATGT | + |
|
Preference number: 3 (lower is better) Translates to: WIWRVDDVIKSS*DLLDTTTLCVC Trigger: ACATACGCACAGTGTTGTTGTGTCCAGCAAGTCCCAAGAGGATTTTATTACATCATCAACCCTCCAGATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| 3UTR CCA 72 bp | ACACAGATGTCAAAGGAGACCAGCATGTCACGAATGTaGATCTGGAGGGTTGATGATGTAATAAAATCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: TQMSKETSMSRM*IWRVDDVIKSS Trigger: AGAGGATTTTATTACATCATCAACCCTCCAGATCCACATTCGTGACATGCTGGTCTCCTTTGACATCTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| 3UTR GCA 72 bp | ATGTATGTATGTATGTATGTATGTATGTGTACCACATaGATGCAGTGTCTGCAGAAGCCAAAAGACGGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: MYVCMYVCMCTT*MQCLQKPKDGD Trigger: GTCTCCGTCTTTTGGCTTCTGCAGACACTGCATGCATGTGGTACACATACATACATACATACATACATACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| CDS-3UTR CCA 90 bp | TCATGCCTGCTCTGTCCCCTCACTGTAGCCATGTGGGGAGGGAGGGTGTCCATGGCAGCAGGAGCAGGCTaGTCACACACATGGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SCLLCPLTVAMWGGRVSMAAGAG*SHTWCS Trigger: GCTGCACCATGTGTGTGACCAGCCTGCTCCTGCTGC...CATGGACACCCTCCCTCCCCACATGGCTACAGTGAGGGGACAGAGCAGGCATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| 3UTR CAA 72 bp | GAAGCCCTGGGCTCTCTCCTGCTAGGTAGAGGTGCTTaGGATATGGACAGCGACAGGAGGGGGCTTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EALGSLLLGRGA*DMDSDRRGLAA Trigger: GGCAGCAAGCCCCCTCCTGTCGCTGTCCATATCCAAAGCACCTCTACCTAGCAGGAGAGAGCCCAGGGCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| CDS-3UTR GCA 90 bp | AGGAGAGGAGTAGAAGGTCTGTGCCATGTCCCGGGTTGTCTCGAGCAGACACGGCTCCAAAGAACTGGGTaGAGGCGCCGCTCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RRGVEGLCHVPGCLEQTRLQRTG*RRRSAA Trigger: TGCTGCTGAGCGGCGCCTGCACCCAGTTCTTTGGAG...CCGTGTCTGCTCGAGACAACCCGGGACATGGCACAGACCTTCTACTCCTCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| CDS-3UTR CCA 90 bp | TCATGCCTGCTCTGTCCCCTCACTGTAGCCATGTGGGGAGGGAGGGTGTCCATGTCAGGGAAGTTCAGCTaGTCCTGCAGCAGCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SCLLCPLTVAMWGGRVSMSGKFS*SCSSSG Trigger: CCCTGAGCTGCTGCAGGACCAGCTGAACTTCCCTGA...CATGGACACCCTCCCTCCCCACATGGCTACAGTGAGGGGACAGAGCAGGCATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| CDS-3UTR TCA 90 bp | GAGGGTGTCCATGGAAGCAGCTGTTATGAGGTGGTCCAGGAGCTCTGCCTAACAGGCAGAGCACCCAGATaGGCGCACACACACAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EGVHGSSCYEVVQELCLTGRAPR*AHTHRW Trigger: CCACCTGTGTGTGTGCGCTCATCTGGGTGCTCTGCC...TGTTAGGCAGAGCTCCTGGACCACCTCATAACAGCTGCTTCCATGGACACCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| CDS-3UTR GCA 90 bp | AGGAGAGGAGTAGAAGGTCTGTGCCATGTCCCGGGTTGTCTCGAGCAGACACGGTGGACAGCCAGAAGATaGCAAAGGGCAGGCCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RRGVEGLCHVPGCLEQTRWTARR*QRAGRR Trigger: TCTGCGGCCTGCCCTTTGGCATCTTCTGGCTGTCCA...CCGTGTCTGCTCGAGACAACCCGGGACATGGCACAGACCTTCTACTCCTCTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| CDS-3UTR CCA 90 bp | AGGAGAGGAGTAGAAGGTCTGTGCCATGTCCCGGGTTGTCTCGAGCAGACACGGTCCACAAGTCCCCCTTaGGAAGCCTCTCTCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RRGVEGLCHVPGCLEQTRSTSPP*EASLPA Trigger: AGCTGGGAGAGAGGCTTCCCAAGGGGGACTTGTGGA...CCGTGTCTGCTCGAGACAACCCGGGACATGGCACAGACCTTCTACTCCTCTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| CDS-3UTR CCA 90 bp | GCCTTTGTGGGGGATACAAAGAACTCCTTTGGAAGAGGAAGACCAGCACTCCCAGGGAAGCCCCGAGGCTaGTGTCTCTCTGGACCACGC | + |
|
Preference number: 4 (lower is better) Translates to: AFVGDTKNSFGRGRPALPGKPRG*CLSGPR Trigger: GCGTGGTCCAGAGAGACACCAGCCTCGGGGCTTCCC...TGGGAGTGCTGGTCTTCCTCTTCCAAAGGAGTTCTTTGTATCCCCCACAAAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| CDS-3UTR CCA 90 bp | GATGAGGTTTATATCCTCCAGTGGTCTCTCTCCTCAACACAGTTCCCTCTGGGCTCTCCAAGTGCCCGCTaGAGCACCAGCCGGAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DEVYILQWSLSSTQFPLGSPSAR*STSRRG Trigger: ACCCCTCCGGCTGGTGCTCCAGCGGGCACTTGGAGA...GCCCAGAGGGAACTGTGTTGAGGAGAGAGACCACTGGAGGATATAAACCTCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| CDS-3UTR TCA 90 bp | GCCTTTGTGGGGGATACAAAGAACTCCTTTGGAAGAGGAAGACCAGCACTCCCAGGCAGCAGAGGAAGATaGGGTCGGCGCAGGCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: AFVGDTKNSFGRGRPALPGSRGR*GRRRPH Trigger: ATGTGGCCTGCGCCGACCTCATCTTCCTCTGCTGCC...TGGGAGTGCTGGTCTTCCTCTTCCAAAGGAGTTCTTTGTATCCCCCACAAAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| CDS-3UTR CCA 90 bp | GCCTTTGTGGGGGATACAAAGAACTCCTTTGGAAGAGGAAGACCAGCACTCCCAAGGCAGGGAAGAGAGTaGCCAGGCACTGCTCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AFVGDTKNSFGRGRPALPRQGRE*PGTAPC Trigger: GCACGGAGCAGTGCCTGGCCACTCTCTTCCCTGCCT...TGGGAGTGCTGGTCTTCCTCTTCCAAAGGAGTTCTTTGTATCCCCCACAAAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| CDS-3UTR CCA 90 bp | ACTCAAGCAGGAGTAAAGGCAGGAAGCAAGGAGGAAAGCCACCTACTGACTTGCGGTGCTCCAAAGAACTaGGTGCAGGCGCCGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TQAGVKAGSKEESHLLTCGAPKN*VQAPLS Trigger: GCTGAGCGGCGCCTGCACCCAGTTCTTTGGAGCACC...GCAAGTCAGTAGGTGGCTTTCCTCCTTGCTTCCTGCCTTTACTCCTGCTTGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| CDS-3UTR TCA 90 bp | AGAAGCCAAAAGACGGAGACAGATCCCCTGGAACTAGAGTTACAGATAAATCCCGGCACTGCTCCGTGCTaGTGGCCGCCAGGAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RSQKTETDPLELELQINPGTAPC*WPPGGS Trigger: TGAGCCTCCTGGCGGCCATCAGCACGGAGCAGTGCC...GGGATTTATCTGTAACTCTAGTTCCAGGGGATCTGTCTCCGTCTTTTGGCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| CDS-3UTR GCA 90 bp | TGCTTAGCTAGCTTTTTATATAGCTCAGGTCCATTTGCCTACGGGTGGTTCTGCAGAGGGCCACTCCATTaGCCAGCAGCCCGCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CLASFLYSSGPFAYGWFCRGPLH*PAARPG Trigger: GCCTGGGCGGGCTGCTGGGCAATGGAGTGGCCCTCT...GCAGAACCACCCGTAGGCAAATGGACCTGAGCTATATAAAAAGCTAGCTAAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| CDS-3UTR GCA 90 bp | GATGAGGTTTATATCCTCCAGTGGTCTCTCTCCTCAACACAGTTCCCTCTGGGCGGCAGCCAGGAGAACTaGCACCACCAGCCACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: DEVYILQWSLSSTQFPLGGSQEN*HHQPQH Trigger: ATGCTGTGGCTGGTGGTGGCAGTTCTCCTGGCTGCC...GCCCAGAGGGAACTGTGTTGAGGAGAGAGACCACTGGAGGATATAAACCTCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| CDS-3UTR GCA 90 bp | CGAGCAGACACGGGCTTCTCTGAGCCTCAAAGACTCTGGGCTAGTGCCCAGTTGTCTGGCCAGGTGTGCTaGCCAAGAAAAAGTAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: RADTGFSEPQRLWASAQLSGQVC*PRKSRW Trigger: CCATCTACTTTTTCTTGGGCAGCACACCTGGCCAGA...CAACTGGGCACTAGCCCAGAGTCTTTGAGGCTCAGAGAAGCCCGTGTCTGCTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| CDS-3UTR CCA 90 bp | GAAGAAGTGGGTGTCCAGAGGCCAAAATTGGACTTGTGGACAGGCTACTTCCCTGGCTGGTCACACACATaGTGCAGCACAGGGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EEVGVQRPKLDLWTGYFPGWSHT*CSTGQP Trigger: TGGCTGCCCTGTGCTGCACCATGTGTGTGACCAGCC...AGGGAAGTAGCCTGTCCACAAGTCCAATTTTGGCCTCTGGACACCCACTTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| CDS-3UTR CCA 90 bp | AGAAGCCAAAAGACGGAGACAGATCCCCTGGAACTAGAGTTACAGATAAATCCCCCAGCAGGACCAGGGTaGGGAAGCCCCGAGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSQKTETDPLELELQINPPAGPG*GSPEAG Trigger: ACCAGCCTCGGGGCTTCCCCACCCTGGTCCTGCTGG...GGGATTTATCTGTAACTCTAGTTCCAGGGGATCTGTCTCCGTCTTTTGGCTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| CDS-3UTR GCA 90 bp | GAAGAAGTGGGTGTCCAGAGGCCAAAATTGGACTTGTGGACAGGCTACTTCCCTTGGTCACACACATGGTaGAGCACAGGGCAGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EEVGVQRPKLDLWTGYFPWSHTW*STGQPG Trigger: TCCTGGCTGCCCTGTGCTGCACCATGTGTGTGACCA...AGGGAAGTAGCCTGTCCACAAGTCCAATTTTGGCCTCTGGACACCCACTTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| CDS-3UTR CCA 90 bp | TCCAAGTCAGTATTACACCCACACAGATGTCAAAGGAGACCAGCATGTCACGAAGGTGGTCAGGTAGCGTaGGCGGCGGCACAGGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: SKSVLHPHRCQRRPACHEGGQVA*AAAQVP Trigger: TGGTACCTGTGCCGCCGCCCACGCTACCTGACCACC...TTCGTGACATGCTGGTCTCCTTTGACATCTGTGTGGGTGTAATACTGACTTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| CDS-3UTR CCA 90 bp | GAGGGTGTCCATGGAAGCAGCTGTTATGAGGTGGTCCAGGAGCTCTGCCTAACAGCCAGGACAGGTTCTTaGACAGCCAGAAGATGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: EGVHGSSCYEVVQELCLTARTGS*TARRCQ Trigger: TTGGCATCTTCTGGCTGTCCAAGAACCTGTCCTGGC...TGTTAGGCAGAGCTCCTGGACCACCTCATAACAGCTGCTTCCATGGACACCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| 3UTR CAA 72 bp | TTCCCCCATGAAGAAGTGGGTGTCCAGAGGCCAAAATaGGACTTGTGGACAGGCTACTTCCCTTCGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FPHEEVGVQRPK*DLWTGYFPSCS Trigger: AGAGCACGAAGGGAAGTAGCCTGTCCACAAGTCCAATTTTGGCCTCTGGACACCCACTTCTTCATGGGGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| CDS-3UTR GCA 90 bp | GAAGAAGTGGGTGTCCAGAGGCCAAAATTGGACTTGTGGACAGGCTACTTCCCTAAGTTCAGCTGGTCCTaGAGCAGCTCAGGGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: EEVGVQRPKLDLWTGYFPKFSWS*SSSGMM Trigger: CATCATCCCTGAGCTGCTGCAGGACCAGCTGAACTT...AGGGAAGTAGCCTGTCCACAAGTCCAATTTTGGCCTCTGGACACCCACTTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| CDS-3UTR GCA 90 bp | ACTCAAGCAGGAGTAAAGGCAGGAAGCAAGGAGGAAAGCCACCTACTGACTTGCACCTCTGGCCAGGTGTaGTGCCCAAGAAAAAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TQAGVKAGSKEESHLLTCTSGQV*CPRKSR Trigger: TCTACTTTTTCTTGGGCAGCACACCTGGCCAGAGGT...GCAAGTCAGTAGGTGGCTTTCCTCCTTGCTTCCTGCCTTTACTCCTGCTTGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| 3UTR CAA 72 bp | CATGAAGAAGTGGGTGTCCAGAGGCCAAAATTGGACTaGTGGACAGGCTACTTCCCTTCGTGCTCTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HEEVGVQRPKLD*WTGYFPSCSQF Trigger: GAACTGAGAGCACGAAGGGAAGTAGCCTGTCCACAAGTCCAATTTTGGCCTCTGGACACCCACTTCTTCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
||
| CDS-3UTR GCA 90 bp | GAAATTCAGACTCAGGAGCCACCAGTTTTTCTGAAACATTGGATGAGGTTTATAAGCCTCATCTCCAAGTaGCCGCTGGAGCACCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: EIQTQEPPVFLKHWMRFISLISK*PLEHQP Trigger: CGGCTGGTGCTCCAGCGGGCACTTGGAGATGAGGCT...TATAAACCTCATCCAATGTTTCAGAAAAACTGGTGGCTCCTGAGTCTGAATTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| CDS-3UTR TCA 90 bp | CTGAATGTCCAGTTTCAGTGTCATTTATCCCTCACTAAAGGAAGGAGCATTGGGTGTAGACATTTTGGTTaGGCAGCCAGAGGGCCACTC | + |
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Preference number: 4 (lower is better) Translates to: LNVQFQCHLSLTKGRSIGCRHFG*AARGPL Trigger: GAGTGGCCCTCTGGCTGCTCAACCAAAATGTCTACA...CCCAATGCTCCTTCCTTTAGTGAGGGATAAATGACACTGAAACTGGACATTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| CDS-3UTR GCA 90 bp | CCAGTTTTTCTGAAACATTGGATGAGGTTTATATCCTCCAGTGGTCTCTCTCCTCCATTTCTCCCTGGGTaGTGGGAGAATCTGTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: PVFLKHWMRFISSSGLSPPFLPG*WENLCA Trigger: TGCACACAGATTCTCCCAGCACCCAGGGAGAAATGG...AGGAGAGAGACCACTGGAGGATATAAACCTCATCCAATGTTTCAGAAAAACTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| CDS-3UTR CCA 90 bp | TGCTTAGCTAGCTTTTTATATAGCTCAGGTCCATTTGCCTACGGGTGGTTCTGCCCAAGAAAAAGTAGATaGCAGGCTTGGCTGCACTGT | + |
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Preference number: 4 (lower is better) Translates to: CLASFLYSSGPFAYGWFCPRKSR*QAWLHC Trigger: ACAGTGCAGCCAAGCCTGCCATCTACTTTTTCTTGG...GCAGAACCACCCGTAGGCAAATGGACCTGAGCTATATAAAAAGCTAGCTAAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| 3UTR CAA 72 bp | AATTCAGACTCAGGAGCCACCAGTTTTTCTGAAACATaGGATGAGGTTTATATCCTCCAGTGGTCTCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: NSDSGATSFSET*DEVYILQWSLS Trigger: GGAGAGAGACCACTGGAGGATATAAACCTCATCCAATGTTTCAGAAAAACTGGTGGCTCCTGAGTCTGAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| CDS-3UTR CCA 90 bp | CCAGTTTTTCTGAAACATTGGATGAGGTTTATATCCTCCAGTGGTCTCTCTCCTCATCCAAGAGATAGATaGAGAAGGGGTTCCTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: PVFLKHWMRFISSSGLSPHPRDR*RRGSCR Trigger: TCTACAGGAACCCCTTCTCCATCTATCTCTTGGATG...AGGAGAGAGACCACTGGAGGATATAAACCTCATCCAATGTTTCAGAAAAACTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| CDS CCA 90 bp | GGCCAGCAGGACCAGGGTGGGGAAGCCCCGAGGCTGGTGTCTCTCTaGACCACGCTCCACCCGCAGCAGCAGGAGCAGGCTGGTCACACA | + |
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Preference number: 5 (lower is better) Translates to: GQQDQGGEAPRLVSL*TTLHPQQQEQAGHT Trigger: TGTGTGACCAGCCTGCTCCTGCTGCTGCGGGTGGAGCGTGGTCCAGAGAGACACCAGCCTCGGGGCTTCCCCACCCTGGTCCTGCTGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| CDS TCA 90 bp | AGGCGCCGCTCAGCAGCAGGTCCAGTAGCAGGCAGAGCACCCAGATaGGCGCACACACACAGGTGGTCAGGTAGCGTGGGCGGCGGCACA | + |
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Preference number: 5 (lower is better) Translates to: RRRSAAGPVAGRAPR*AHTHRWSGSVGGGT Trigger: TGTGCCGCCGCCCACGCTACCTGACCACCTGTGTGTGTGCGCTCATCTGGGTGCTCTGCCTGCTACTGGACCTGCTGCTGAGCGGCGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| CDS GCA 90 bp | ACAGCATGTCACACAGGTGGTAGCTGGGTGCTCCAAAGAACTGGGTaGAGGCGCCGCTCAGCAGCAGGTCCAGTAGCAGGCAGAGCACCC | + |
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Preference number: 5 (lower is better) Translates to: TACHTGGSWVLQRTG*RRRSAAGPVAGRAP Trigger: GGGTGCTCTGCCTGCTACTGGACCTGCTGCTGAGCGGCGCCTGCACCCAGTTCTTTGGAGCACCCAGCTACCACCTGTGTGACATGCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| CDS GCA 90 bp | GCTGGAGCACCAGCCGGAGGGGTTCCCGAAACCTCTGGCCAGGTGTaGTGCCCAAGAAAAAGTAGATGGCAGGCTTGGCTGCACTGTGCA | + |
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Preference number: 5 (lower is better) Translates to: AGAPAGGVPETSGQV*CPRKSRWQAWLHCA Trigger: TGCACAGTGCAGCCAAGCCTGCCATCTACTTTTTCTTGGGCAGCACACCTGGCCAGAGGTTTCGGGAACCCCTCCGGCTGGTGCTCCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| CDS CCA 90 bp | CGCAGCATGGTCAGGCTGATATGTACAAATTCAGGGAAGTTCAGCTaGTCCTGCAGCAGCTCAGGGATGATGGCCACCATGTGGCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: RSMVRLICTNSGKFS*SCSSSGMMATMWQQ Trigger: CTGCTGCCACATGGTGGCCATCATCCCTGAGCTGCTGCAGGACCAGCTGAACTTCCCTGAATTTGTACATATCAGCCTGACCATGCTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| CDS-3UTR CAA 90 bp | CCAGTTTTTCTGAAACATTGGATGAGGTTTATATCCTCCAGTGGTCTCTCTCCTCAGAGGGCCACTCCATaGCCCAGCAGCCCGCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: PVFLKHWMRFISSSGLSPQRATP*PSSPPR Trigger: CCTGGGCGGGCTGCTGGGCAATGGAGTGGCCCTCTG...AGGAGAGAGACCACTGGAGGATATAAACCTCATCCAATGTTTCAGAAAAACTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| CDS GCA 90 bp | ATGGTCAGGCTGATATGTACAAATTCAGGGAAGTTCAGCTGGTCCTaGAGCAGCTCAGGGATGATGGCCACCATGTGGCAGCAGAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: MVRLICTNSGKFSWS*SSSGMMATMWQQRK Trigger: CTTCCTCTGCTGCCACATGGTGGCCATCATCCCTGAGCTGCTGCAGGACCAGCTGAACTTCCCTGAATTTGTACATATCAGCCTGACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| CDS-3UTR CAA 90 bp | TGCTTAGCTAGCTTTTTATATAGCTCAGGTCCATTTGCCTACGGGTGGTTCTGCGTCCACAAGTCCCCCTaGGGAAGCCTCTCTCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: CLASFLYSSGPFAYGWFCVHKSP*GSLSPS Trigger: GCTGGGAGAGAGGCTTCCCAAGGGGGACTTGTGGAC...GCAGAACCACCCGTAGGCAAATGGACCTGAGCTATATAAAAAGCTAGCTAAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| CDS-3UTR CAA 90 bp | GAGGATGCCTTCTGCCACTTAGGACTTCCAAGTTCAGCCGCTGAGAACTTCCAAGACAGGATGGTCAGGTaGAAAGCCATTTCTCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: EDAFCHLGLPSSAAENFQDRMVR*KAISPW Trigger: CCAGGGAGAAATGGCTTTCAACCTGACCATCCTGTC...TTGGAAGTTCTCAGCGGCTGAACTTGGAAGTCCTAAGTGGCAGAAGGCATCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| CDS-3UTR CAA 90 bp | GAAGAAGTGGGTGTCCAGAGGCCAAAATTGGACTTGTGGACAGGCTACTTCCCTGTTCCTGTAGACATTTaGGTTGAGCAGCCAGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: EEVGVQRPKLDLWTGYFPVPVDI*VEQPEG Trigger: GCCCTCTGGCTGCTCAACCAAAATGTCTACAGGAAC...AGGGAAGTAGCCTGTCCACAAGTCCAATTTTGGCCTCTGGACACCCACTTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| CDS GCA 90 bp | CTGGCCAGGTGTGCTGCCCAAGAAAAAGTAGATGGCAGGCTTGGCTaGACTGTGCACACTGGCCATGAAGAAGCTGAAATGATAGAAGTA | + |
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Preference number: 5 (lower is better) Translates to: LARCAAQEKVDGRLG*TVHTGHEEAEMIEV Trigger: TACTTCTATCATTTCAGCTTCTTCATGGCCAGTGTGCACAGTGCAGCCAAGCCTGCCATCTACTTTTTCTTGGGCAGCACACCTGGCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| CDS-3UTR CAA 90 bp | CCAGTTTTTCTGAAACATTGGATGAGGTTTATATCCTCCAGTGGTCTCTCTCCTTGCCAGGACAGGTTCTaGGACAGCCAGAAGATGCCA | + |
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Preference number: 5 (lower is better) Translates to: PVFLKHWMRFISSSGLSPCQDRF*DSQKMP Trigger: TGGCATCTTCTGGCTGTCCAAGAACCTGTCCTGGCA...AGGAGAGAGACCACTGGAGGATATAAACCTCATCCAATGTTTCAGAAAAACTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| CDS CCA 72 bp | ACGGCCAGCAGGACCAGGGTGGGGAAGCCCCGAGGCTaGTGTCTCTCTGGACCACGCTCCACCCGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: TASRTRVGKPRG*CLSGPRSTRSS Trigger: GCTGCTGCGGGTGGAGCGTGGTCCAGAGAGACACCAGCCTCGGGGCTTCCCCACCCTGGTCCTGCTGGCCGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| CDS CCA 72 bp | GACCAGGGTGGGGAAGCCCCGAGGCTGGTGTCTCTCTaGACCACGCTCCACCCGCAGCAGCAGGAGCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: DQGGEAPRLVSL*TTLHPQQQEQA Trigger: AGCCTGCTCCTGCTGCTGCGGGTGGAGCGTGGTCCAGAGAGACACCAGCCTCGGGGCTTCCCCACCCTGGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| CDS GCA 72 bp | CACACAGGTGGTAGCTGGGTGCTCCAAAGAACTGGGTaGAGGCGCCGCTCAGCAGCAGGTCCAGTAGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: HTGGSWVLQRTG*RRRSAAGPVAG Trigger: GCCTGCTACTGGACCTGCTGCTGAGCGGCGCCTGCACCCAGTTCTTTGGAGCACCCAGCTACCACCTGTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| CDS CCA 72 bp | CCAGATGAGCGCACACACACAGGTGGTCAGGTAGCGTaGGCGGCGGCACAGGTACCAGGCAGGGAAGAGAGT | + |
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Preference number: 6 (lower is better) Translates to: PDERTHTGGQVA*AAAQVPGREES Trigger: ACTCTCTTCCCTGCCTGGTACCTGTGCCGCCGCCCACGCTACCTGACCACCTGTGTGTGTGCGCTCATCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| CDS GCA 72 bp | CACCAGCCACAGCATGTCACACAGGTGGTAGCTGGGTaGTCCAAAGAACTGGGTGCAGGCGCCGCTCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: HQPQHVTQVVAG*SKELGAGAAQQ Trigger: CTGCTGAGCGGCGCCTGCACCCAGTTCTTTGGAGCACCCAGCTACCACCTGTGTGACATGCTGTGGCTGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| CDS CAA 72 bp | AGGCTGAGGAGCTCTGTGAGGGACAGGATGGTCAGGTaGAAAGCCATTTCTCCCTGGGTGCTGGGAGAATCT | + |
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Preference number: 6 (lower is better) Translates to: RLRSSVRDRMVR*KAISPWVLGES Trigger: AGATTCTCCCAGCACCCAGGGAGAAATGGCTTTCAACCTGACCATCCTGTCCCTCACAGAGCTCCTCAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| CDS GCA 72 bp | CTGATATGTACAAATTCAGGGAAGTTCAGCTGGTCCTaGAGCAGCTCAGGGATGATGGCCACCATGTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: LICTNSGKFSWS*SSSGMMATMWQ Trigger: CTGCCACATGGTGGCCATCATCCCTGAGCTGCTGCAGGACCAGCTGAACTTCCCTGAATTTGTACATATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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| CDS GCA 72 bp | TGTGCTGCCCAAGAAAAAGTAGATGGCAGGCTTGGCTaGACTGTGCACACTGGCCATGAAGAAGCTGAAATG | + |
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Preference number: 6 (lower is better) Translates to: CAAQEKVDGRLG*TVHTGHEEAEM Trigger: CATTTCAGCTTCTTCATGGCCAGTGTGCACAGTGCAGCCAAGCCTGCCATCTACTTTTTCTTGGGCAGCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054048.10 |
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