Pregenerated sensors for MRGPRD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051207Ensembl transcript IDs: ENSMUST00000062163.8
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACAGTGGGGTGACCAGCATCTCTGTCACCTTGAGCATGACACACTaGCTTGTGCAGAAGCCTCCAGATCTTCTAGGAGCTGGCCTGAAG | + |
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Preference number: 1 (lower is better) Translates to: HSGVTSISVTLSMTH*LVQKPPDLLGAGLK Trigger: CTTCAGGCCAGCTCCTAGAAGATCTGGAGGCTTCTGCACAAGCCAGTGTGTCATGCTCAAGGTGACAGAGATGCTGGTCACCCCACTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR TCA 90 bp | GAACACAAGGTGATAGTGGTGAACCCTCCCTGGCAGAGAGGAACGTaGCCCAAACATTTTGAGGTGCAAGGCCTTTGCATTGCAGGCTTG | + |
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Preference number: 1 (lower is better) Translates to: EHKVIVVNPPWQRGT*PKHFEVQGLCIAGL Trigger: CAAGCCTGCAATGCAAAGGCCTTGCACCTCAAAATGTTTGGGTCACGTTCCTCTCTGCCAGGGAGGGTTCACCACTATCACCTTGTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR GCA 90 bp | TATCTGGGATGCGTGTCATGTCATGCCAGGAAAAGTCACACAATGTaGTGCAGGTGCGGTGATATGTGCATCAGAGACACTACTTTGTGC | + |
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Preference number: 1 (lower is better) Translates to: YLGCVSCHARKSHTM*CRCGDMCIRDTTLC Trigger: GCACAAAGTAGTGTCTCTGATGCACATATCACCGCACCTGCAGCACATTGTGTGACTTTTCCTGGCATGACATGACACGCATCCCAGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR TCA 90 bp | TGCTCTATCCATTGGGAAACTCCATTTCCCAGACAGCCTTGCCCATaGTGGGACCCAAAGTTAGGATCTGTGTCTAAACAGGTAAAACAG | + |
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Preference number: 1 (lower is better) Translates to: CSIHWETPFPRQPCP*WDPKLGSVSKQVKQ Trigger: CTGTTTTACCTGTTTAGACACAGATCCTAACTTTGGGTCCCATCATGGGCAAGGCTGTCTGGGAAATGGAGTTTCCCAATGGATAGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR TCA 90 bp | AACCCCTGGACCACACTTCTGTGTGTTAATTGTTTCATCAGACTGTaGTTGGATGGGATTGTTCCTTGGTCTTCATTGGTGCCCTATCTG | + |
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Preference number: 1 (lower is better) Translates to: NPWTTLLCVNCFIRL*LDGIVPWSSLVPYL Trigger: CAGATAGGGCACCAATGAAGACCAAGGAACAATCCCATCCAATCACAGTCTGATGAAACAATTAACACACAGAAGTGTGGTCCAGGGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR TCA 90 bp | AGAACCTCTGGAAATGGTCATCCATGCTGGGGAGAAACTTATCAGTaGCATGTCTGTTTTAGGGTCACCTACATTTCTGTAAGTAATGCT | + |
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Preference number: 1 (lower is better) Translates to: RTSGNGHPCWGETYQ*HVCFRVTYISVSNA Trigger: AGCATTACTTACAGAAATGTAGGTGACCCTAAAACAGACATGTCACTGATAAGTTTCTCCCCAGCATGGATGACCATTTCCAGAGGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR CCA 90 bp | AGCTGTTTAGCTTTAACTGTCAACTTGACACAACCTAGAATCACTTaGGATGAAAGGAGCCTCAATGAGGAATTGAGGTTAGCTTGTAAG | + |
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Preference number: 1 (lower is better) Translates to: SCLALTVNLTQPRIT*DERSLNEELRLACK Trigger: CTTACAAGCTAACCTCAATTCCTCATTGAGGCTCCTTTCATCCCAAGTGATTCTAGGTTGTGTCAAGTTGACAGTTAAAGCTAAACAGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR GCA 90 bp | ATTTGTGCTCTTTCTGTTCTTGACTTTGTGTGTGATGTCACTAGCTaGTTACATTTATGCCTTGACTTCCCTGAAATGATGGGTCATGAT | + |
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Preference number: 1 (lower is better) Translates to: ICALSVLDFVCDVTS*LHLCLDFPEMMGHD Trigger: ATCATGACCCATCATTTCAGGGAAGTCAAGGCATAAATGTAAGCAGCTAGTGACATCACACACAAAGTCAAGAACAGAAAGAGCACAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR-3UTR CCA 90 bp | ACCTCCTCTTGGATGCATGTAACCCCACTTCACTTGTCATGGTTTAGGGAGGTGGGCTGGGTGGGGCTTTaGAGGAGTTCCTGGTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: TSSWMHVTPLHLSWFREVGWVGL*RSSWLG Trigger: GCCCAACCAGGAACTCCTCCAAAGCCCCACCCAGCC...CACCTCCCTAAACCATGACAAGTGAAGTGGGGTTACATGCATCCAAGAGGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCCTCTCTCTTCCCAACCTCTGGCTCACCGTGTTTCTGCCCTCTCCTGTCCAAGCAAGCAGGGGATaGACCTATGCATTTGTGCTC | + |
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Preference number: 2 (lower is better) Translates to: LSLSLPNLWLTVFLPSPVQASRG*TYAFVL Trigger: GAGCACAAATGCATAGGTCCATCCCCTGCTTGCTTG...GACAGGAGAGGGCAGAAACACGGTGAGCCAGAGGTTGGGAAGAGAGAGGGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTCCCTCTCTCTTCCCAACCTCTGGCTCACCGTGTTTCTGCCCTCTCCTGTCCAGAGACTTTCAGAATaGAGCCTGCAGGAATTCCCT | + |
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Preference number: 2 (lower is better) Translates to: LSLSLPNLWLTVFLPSPVQRLSE*SLQEFP Trigger: AGGGAATTCCTGCAGGCTTCATTCTGAAAGTCTCTG...GACAGGAGAGGGCAGAAACACGGTGAGCCAGAGGTTGGGAAGAGAGAGGGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR CAA 90 bp | GGGGGTGGGAAAAACCGTTTCAACCTGCATGAGATGCTCTATCCATaGGGAAACTCCATTTCCCAGACAGCCTTGCCCATGATGGGACCC | + |
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Preference number: 2 (lower is better) Translates to: GGGKNRFNLHEMLYP*GNSISQTALPMMGP Trigger: GGGTCCCATCATGGGCAAGGCTGTCTGGGAAATGGAGTTTCCCAATGGATAGAGCATCTCATGCAGGTTGAAACGGTTTTTCCCACCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTCTCTTCCCAACCTCTGGCTCACCGTGTTTCTGCCCTCTCCTGTCACAAGGCCAAACATTTTGAGGTaGAAGGCCTTTGCATTGCAG | + |
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Preference number: 2 (lower is better) Translates to: LSLPNLWLTVFLPSPVTRPNILR*KAFALQ Trigger: CTGCAATGCAAAGGCCTTGCACCTCAAAATGTTTGG...CCTTGTGACAGGAGAGGGCAGAAACACGGTGAGCCAGAGGTTGGGAAGAGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCAGGAACGCAAGGCTATTGACTCAGGCTCCATGCTGTGCCTGCCTCCTGCAAGGTGCGGTGATATGTaGATCAGAGACACTACTTTG | + |
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Preference number: 2 (lower is better) Translates to: KQERKAIDSGSMLCLPPARCGDM*IRDTTL Trigger: CAAAGTAGTGTCTCTGATGCACATATCACCGCACCT...TGCAGGAGGCAGGCACAGCATGGAGCCTGAGTCAATAGCCTTGCGTTCCTGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCCTCTCTCTTCCCAACCTCTGGCTCACCGTGTTTCTGCCCTCTCCTGTCAGATGCTCTATCCATTaGGAAACTCCATTTCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: LSLSLPNLWLTVFLPSPVRCSIH*ETPFPR Trigger: TCTGGGAAATGGAGTTTCCCAATGGATAGAGCATCT...GACAGGAGAGGGCAGAAACACGGTGAGCCAGAGGTTGGGAAGAGAGAGGGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCAGGAACGCAAGGCTATTGACTCAGGCTCCATGCTGTGCCTGCCTCCTGCAGGAGAAACTTATCAGTaGCATGTCTGTTTTAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: KQERKAIDSGSMLCLPPAGETYQ*HVCFRV Trigger: GACCCTAAAACAGACATGTCACTGATAAGTTTCTCC...TGCAGGAGGCAGGCACAGCATGGAGCCTGAGTCAATAGCCTTGCGTTCCTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR-3UTR GCA 90 bp | CTCACCGTGTTTCTGCCCTCTCCTGTCACAAGGTTAACTGGCACAGATGTCTCAGCAAGGCCTTTGCATTaGAGGCTTGCTGGGTACTTT | + |
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Preference number: 2 (lower is better) Translates to: LTVFLPSPVTRLTGTDVSARPLH*RLAGYF Trigger: AAAGTACCCAGCAAGCCTGCAATGCAAAGGCCTTGC...TGAGACATCTGTGCCAGTTAACCTTGTGACAGGAGAGGGCAGAAACACGGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTCTCTTCCCAACCTCTGGCTCACCGTGTTTCTGCCCTCTCCTGTCACAAGGCAACCTAGAATCACTTaGGATGAAAGGAGCCTCAAT | + |
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Preference number: 2 (lower is better) Translates to: LSLPNLWLTVFLPSPVTRQPRIT*DERSLN Trigger: ATTGAGGCTCCTTTCATCCCAAGTGATTCTAGGTTG...CCTTGTGACAGGAGAGGGCAGAAACACGGTGAGCCAGAGGTTGGGAAGAGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCTAGGAGCTGGCCTGAAGCAGGAACGCAAGGCTATTGACTCAGGCTCCATGTTGACTTCCCTGAAATaGTGGGTCATGATCTGTAGT | + |
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Preference number: 2 (lower is better) Translates to: LLGAGLKQERKAIDSGSMLTSLK*WVMICS Trigger: ACTACAGATCATGACCCATCATTTCAGGGAAGTCAA...CATGGAGCCTGAGTCAATAGCCTTGCGTTCCTGCTTCAGGCCAGCTCCTAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAACCTCTGGAAATGGTCATCCATGCTGGGGAGAAACTTATCAGTGACATGTCTTTTAGGGAAGGGCTaGGTGGGGCTTTGGAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: QNLWKWSSMLGRNLSVTCLLGKG*VGLWRS Trigger: ACTCCTCCAAAGCCCCACCCAGCCCTTCCCTAAAAG...ACATGTCACTGATAAGTTTCTCCCCAGCATGGATGACCATTTCCAGAGGTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR-3UTR TCA 90 bp | GTGTTTCTGCCCTCTCCTGTCACAAGGTTAACTGGCACAGATGTCTCAGGGGACACTTTGTGCACTAAATaGTGTTACCAGTATATCCCC | + |
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Preference number: 2 (lower is better) Translates to: VFLPSPVTRLTGTDVSGDTLCTK*CYQYIP Trigger: GGGGATATACTGGTAACATCATTTAGTGCACAAAGT...GTCCCCTGAGACATCTGTGCCAGTTAACCTTGTGACAGGAGAGGGCAGAAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTTTCTGCCCTCTCCTGTCACAAGGTTAACTGGCACAGATGTCTCAGGGGACTGTGATGTCACTAGCTaGTTACATTTATGCCTTGAC | + |
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Preference number: 2 (lower is better) Translates to: VFLPSPVTRLTGTDVSGDCDVTS*LHLCLD Trigger: GTCAAGGCATAAATGTAAGCAGCTAGTGACATCACA...GTCCCCTGAGACATCTGTGCCAGTTAACCTTGTGACAGGAGAGGGCAGAAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTTTCTGCCCTCTCCTGTCACAAGGTTAACTGGCACAGATGTCTCAGGGGACTTTCAGAATGAAGCCTaGAGGAATTCCCTTAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: VFLPSPVTRLTGTDVSGDFQNEA*RNSLRK Trigger: TTTCCTAAGGGAATTCCTGCAGGCTTCATTCTGAAA...GTCCCCTGAGACATCTGTGCCAGTTAACCTTGTGACAGGAGAGGGCAGAAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR-3UTR TCA 90 bp | TGTACCTCCTCTTGGATGCATGTAACCCCACTTCACTTGTCATGGTTTAGGGAGTATGAGGGATTGTCTTaGCTGTCGATTGACACAGGA | + |
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Preference number: 2 (lower is better) Translates to: CTSSWMHVTPLHLSWFREYEGLS*LSIDTG Trigger: TCCTGTGTCAATCGACAGTCAAGACAATCCCTCATA...CTCCCTAAACCATGACAAGTGAAGTGGGGTTACATGCATCCAAGAGGAGGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR-3UTR GCA 90 bp | TGTACCTCCTCTTGGATGCATGTAACCCCACTTCACTTGTCATGGTTTAGGGAGATGCGTGTCATGTCATaGCAGGAAAAGTCACACAAT | + |
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Preference number: 2 (lower is better) Translates to: CTSSWMHVTPLHLSWFREMRVMS*QEKSHN Trigger: ATTGTGTGACTTTTCCTGGCATGACATGACACGCAT...CTCCCTAAACCATGACAAGTGAAGTGGGGTTACATGCATCCAAGAGGAGGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR CAA 90 bp | CACTTCTGTGTGTTAATTGTTTCATCAGACTGTGATTGGATGGGATaGTTCCTTGGTCTTCATTGGTGCCCTATCTGGGATGCGTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: HFCVLIVSSDCDWMG*FLGLHWCPIWDACH Trigger: ATGACACGCATCCCAGATAGGGCACCAATGAAGACCAAGGAACAATCCCATCCAATCACAGTCTGATGAAACAATTAACACACAGAAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR-3UTR GCA 90 bp | AGCTTCTTCCCCTGTGATACCTTTTGTCAGGGAACCTGTTACAGCAACAGAAATTTTGCATTGCAGGCTTaGTGGGTACTTTTAGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: SFFPCDTFCQGTCYSNRNFALQA*WVLLGK Trigger: CTTCCCTAAAAGTACCCAGCAAGCCTGCAATGCAAA...ATTTCTGTTGCTGTAACAGGTTCCCTGACAAAAGGTATCACAGGGGAAGAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR CAA 90 bp | ATCCCCAGGTCCAATATGCTAAGCTGTTTAGCTTTAACTGTCAACTaGACACAACCTAGAATCACTTGGGATGAAAGGAGCCTCAATGAG | + |
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Preference number: 2 (lower is better) Translates to: IPRSNMLSCLALTVN*TQPRITWDERSLNE Trigger: CTCATTGAGGCTCCTTTCATCCCAAGTGATTCTAGGTTGTGTCAAGTTGACAGTTAAAGCTAAACAGCTTAGCATATTGGACCTGGGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR-3UTR CCA 90 bp | TGTAATTTTGATATATGTACACACAGTGGGGTGACCAGCATCTCTGTCACCTTGCATCTACAGAACCTCTaGAAATGGTCATCCATGCTG | + |
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Preference number: 2 (lower is better) Translates to: CNFDICTHSGVTSISVTLHLQNL*KWSSML Trigger: CAGCATGGATGACCATTTCCAGAGGTTCTGTAGATG...CAAGGTGACAGAGATGCTGGTCACCCCACTGTGTGTACATATATCAAAATTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR CCA 72 bp | GCATTGCAGGCTTGCTGGGTACTTTTAGGGAAGGGCTaGGTGGGGCTTTGGAGGAGTTCCTGGTTGGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: ALQACWVLLGKG*VGLWRSSWLGS Trigger: GGAGCCCAACCAGGAACTCCTCCAAAGCCCCACCCAGCCCTTCCCTAAAAGTACCCAGCAAGCCTGCAATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR-3UTR CAA 90 bp | GTGTTTCTGCCCTCTCCTGTCACAAGGTTAACTGGCACAGATGTCTCAGGGGACGGGCTGGGTGGGGCTTaGGAGGAGTTCCTGGTTGGG | + |
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Preference number: 3 (lower is better) Translates to: VFLPSPVTRLTGTDVSGDGLGGA*EEFLVG Trigger: CCCAACCAGGAACTCCTCCAAAGCCCCACCCAGCCC...GTCCCCTGAGACATCTGTGCCAGTTAACCTTGTGACAGGAGAGGGCAGAAACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR TCA 72 bp | CCCTCCCTGGCAGAGAGGAACGTGACCCAAACATTTTaGGGTGCAAGGCCTTTGCATTGCAGGCTTGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: PSLAERNVTQTF*GARPLHCRLAG Trigger: CCCAGCAAGCCTGCAATGCAAAGGCCTTGCACCTCAAAATGTTTGGGTCACGTTCCTCTCTGCCAGGGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR GCA 72 bp | CCTGCAGAGCTTTGCCTGTTCAGCAACCTCTTTCTGTaGTGTCCCTCTCTCTTCCCAACCTCTGGCTCACCG | + |
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Preference number: 3 (lower is better) Translates to: PAELCLFSNLFL*CPSLFPTSGSP Trigger: CGGTGAGCCAGAGGTTGGGAAGAGAGAGGGACAGCACAGAAAGAGGTTGCTGAACAGGCAAAGCTCTGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR-3UTR CAA 90 bp | AAGCAGGAACGCAAGGCTATTGACTCAGGCTCCATGCTGTGCCTGCCTCCTGCAATTTCCCAGACAGCCTaGCCCATGATGGGACCCAAA | + |
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Preference number: 3 (lower is better) Translates to: KQERKAIDSGSMLCLPPAISQTA*PMMGPK Trigger: TTTGGGTCCCATCATGGGCAAGGCTGTCTGGGAAAT...TGCAGGAGGCAGGCACAGCATGGAGCCTGAGTCAATAGCCTTGCGTTCCTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR GCA 72 bp | AACGCAAGGCTATTGACTCAGGCTCCATGCTGTGCCTaGCTCCTGCAGAGCTTTGCCTGTTCAGCAACCTCT | + |
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Preference number: 3 (lower is better) Translates to: NARLLTQAPCCA*LLQSFACSATS Trigger: AGAGGTTGCTGAACAGGCAAAGCTCTGCAGGAGGCAGGCACAGCATGGAGCCTGAGTCAATAGCCTTGCGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR-3UTR CAA 90 bp | AAGCAGGAACGCAAGGCTATTGACTCAGGCTCCATGCTGTGCCTGCCTCCTGCACTCTTGTACCTCCTCTaGGATGCATGTAACCCCACT | + |
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Preference number: 3 (lower is better) Translates to: KQERKAIDSGSMLCLPPALLYLL*DACNPT Trigger: AGTGGGGTTACATGCATCCAAGAGGAGGTACAAGAG...TGCAGGAGGCAGGCACAGCATGGAGCCTGAGTCAATAGCCTTGCGTTCCTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR GCA 72 bp | TTCATTGGTGCCCTATCTGGGATGCGTGTCATGTCATaGCAGGAAAAGTCACACAATGTGCTGCAGGTGCGG | + |
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Preference number: 3 (lower is better) Translates to: FIGALSGMRVMS*QEKSHNVLQVR Trigger: CCGCACCTGCAGCACATTGTGTGACTTTTCCTGGCATGACATGACACGCATCCCAGATAGGGCACCAATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR-3UTR CAA 90 bp | CTTCTAGGAGCTGGCCTGAAGCAGGAACGCAAGGCTATTGACTCAGGCTCCATGGAGATGCTCTATCCATaGGGAAACTCCATTTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: LLGAGLKQERKAIDSGSMEMLYP*GNSISQ Trigger: CTGGGAAATGGAGTTTCCCAATGGATAGAGCATCTC...CATGGAGCCTGAGTCAATAGCCTTGCGTTCCTGCTTCAGGCCAGCTCCTAGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR TCA 72 bp | GTGATAGTGGTGAACCCTCCCTGGCAGAGAGGAACGTaGCCCAAACATTTTGAGGTGCAAGGCCTTTGCATT | + |
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Preference number: 3 (lower is better) Translates to: VIVVNPPWQRGT*PKHFEVQGLCI Trigger: AATGCAAAGGCCTTGCACCTCAAAATGTTTGGGTCACGTTCCTCTCTGCCAGGGAGGGTTCACCACTATCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR-3UTR CAA 90 bp | CTCACCGTGTTTCTGCCCTCTCCTGTCACAAGGTTAACTGGCACAGATGTCTCATTCTCTCCCTTTCTCTaGTACCTCCTCTTGGATGCA | + |
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Preference number: 3 (lower is better) Translates to: LTVFLPSPVTRLTGTDVSFSPFL*YLLLDA Trigger: TGCATCCAAGAGGAGGTACAAGAGAAAGGGAGAGAA...TGAGACATCTGTGCCAGTTAACCTTGTGACAGGAGAGGGCAGAAACACGGTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR GCA 72 bp | TGCGTGTCATGTCATGCCAGGAAAAGTCACACAATGTaGTGCAGGTGCGGTGATATGTGCATCAGAGACACT | + |
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Preference number: 3 (lower is better) Translates to: CVSCHARKSHTM*CRCGDMCIRDT Trigger: AGTGTCTCTGATGCACATATCACCGCACCTGCAGCACATTGTGTGACTTTTCCTGGCATGACATGACACGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR-3UTR CAA 90 bp | CTCACCGTGTTTCTGCCCTCTCCTGTCACAAGGTTAACTGGCACAGATGTCTCAAGCCTCAATGAGGAATaGAGGTTAGCTTGTAAGCGT | + |
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Preference number: 3 (lower is better) Translates to: LTVFLPSPVTRLTGTDVSSLNEE*RLACKR Trigger: ACGCTTACAAGCTAACCTCAATTCCTCATTGAGGCT...TGAGACATCTGTGCCAGTTAACCTTGTGACAGGAGAGGGCAGAAACACGGTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR GCA 72 bp | TGTCATGCCAGGAAAAGTCACACAATGTGCTGCAGGTaGGGTGATATGTGCATCAGAGACACTACTTTGTGC | + |
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Preference number: 3 (lower is better) Translates to: CHARKSHTMCCR*GDMCIRDTTLC Trigger: GCACAAAGTAGTGTCTCTGATGCACATATCACCGCACCTGCAGCACATTGTGTGACTTTTCCTGGCATGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR GCA 72 bp | GTGTCATGTCATGCCAGGAAAAGTCACACAATGTGCTaGAGGTGCGGTGATATGTGCATCAGAGACACTACT | + |
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Preference number: 3 (lower is better) Translates to: VSCHARKSHTMC*RCGDMCIRDTT Trigger: AGTAGTGTCTCTGATGCACATATCACCGCACCTGCAGCACATTGTGTGACTTTTCCTGGCATGACATGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR GCA 72 bp | ATTGTTCCTTGGTCTTCATTGGTGCCCTATCTGGGATaGGTGTCATGTCATGCCAGGAAAAGTCACACAATG | + |
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Preference number: 3 (lower is better) Translates to: IVPWSSLVPYLG*VSCHARKSHTM Trigger: CATTGTGTGACTTTTCCTGGCATGACATGACACGCATCCCAGATAGGGCACCAATGAAGACCAAGGAACAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR CCA 72 bp | TTAGAGACTTCTCTCCCTTTCTCTTGTACCTCCTCTTaGATGCATGTAACCCCACTTCACTTGTCATGGTTT | + |
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Preference number: 3 (lower is better) Translates to: LETSLPFSCTSS*MHVTPLHLSWF Trigger: AAACCATGACAAGTGAAGTGGGGTTACATGCATCCAAGAGGAGGTACAAGAGAAAGGGAGAGAAGTCTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR TCA 72 bp | GGAAATGGTCATCCATGCTGGGGAGAAACTTATCAGTaGCATGTCTGTTTTAGGGTCACCTACATTTCTGTA | + |
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Preference number: 3 (lower is better) Translates to: GNGHPCWGETYQ*HVCFRVTYISV Trigger: TACAGAAATGTAGGTGACCCTAAAACAGACATGTCACTGATAAGTTTCTCCCCAGCATGGATGACCATTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
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| 3UTR CCA 72 bp | CACTTCTGTGTGTTAATTGTTTCATCAGACTGTGATTaGATGGGATTGTTCCTTGGTCTTCATTGGTGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: HFCVLIVSSDCD*MGLFLGLHWCP Trigger: AGGGCACCAATGAAGACCAAGGAACAATCCCATCCAATCACAGTCTGATGAAACAATTAACACACAGAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| 3UTR TCA 72 bp | CTAGCTGCTTACATTTATGCCTTGACTTCCCTGAAATaGTGGGTCATGATCTGTAGTTGTGAGCCAAGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: LAAYIYALTSLK*WVMICSCEPSK Trigger: TTTACTTGGCTCACAACTACAGATCATGACCCATCATTTCAGGGAAGTCAAGGCATAAATGTAAGCAGCTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| 3UTR TCA 72 bp | ACCACACTTCTGTGTGTTAATTGTTTCATCAGACTGTaGTTGGATGGGATTGTTCCTTGGTCTTCATTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: TTLLCVNCFIRL*LDGIVPWSSLV Trigger: CACCAATGAAGACCAAGGAACAATCCCATCCAATCACAGTCTGATGAAACAATTAACACACAGAAGTGTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| 3UTR TCA 72 bp | GATATGTGCATCAGAGACACTACTTTGTGCACTAAATaGTGTTACCAGTATATCCCCAGGTCCAATATGCTA | + |
|
Preference number: 3 (lower is better) Translates to: DMCIRDTTLCTK*CYQYIPRSNML Trigger: TAGCATATTGGACCTGGGGATATACTGGTAACATCATTTAGTGCACAAAGTAGTGTCTCTGATGCACATATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| 3UTR GCA 72 bp | CTTTCTGTTCTTGACTTTGTGTGTGATGTCACTAGCTaGTTACATTTATGCCTTGACTTCCCTGAAATGATG | + |
|
Preference number: 3 (lower is better) Translates to: LSVLDFVCDVTS*LHLCLDFPEMM Trigger: CATCATTTCAGGGAAGTCAAGGCATAAATGTAAGCAGCTAGTGACATCACACACAAAGTCAAGAACAGAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTAGGAGCTGGCCTGAAGCAGGAACGCAAGGCTATTGACTCAGGCTCCATGGGCAGCGCTGGGTGCTaGTGGCTGTCAGCAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLGAGLKQERKAIDSGSMGSAGC*WLSAGS Trigger: TGAGCCTGCTGACAGCCATCAGCACCCAGCGCTGCC...CATGGAGCCTGAGTCAATAGCCTTGCGTTCCTGCTTCAGGCCAGCTCCTAGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS-3UTR TCA 90 bp | AAGCAGGAACGCAAGGCTATTGACTCAGGCTCCATGCTGTGCCTGCCTCCTGCACAGCCACCGCCAGGTTaGGCACATAGACACAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KQERKAIDSGSMLCLPPAQPPPG*AHRHRR Trigger: CCTTCTGTGTCTATGTGCTCAACCTGGCGGTGGCTG...TGCAGGAGGCAGGCACAGCATGGAGCCTGAGTCAATAGCCTTGCGTTCCTGCTT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS-3UTR GCA 90 bp | CTGTCCCTCTCTCTTCCCAACCTCTGGCTCACCGTGTTTCTGCCCTCTCCTGTCGACCTGGAGCTGGGCTaGTGTCAAGAGTGGAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLPNLWLTVFLPSPVDLELG*CQEWSS Trigger: TGAACTCCACTCTTGACAGCAGCCCAGCTCCAGGTC...GACAGGAGAGGGCAGAAACACGGTGAGCCAGAGGTTGGGAAGAGAGAGGGACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAGGAACGCAAGGCTATTGACTCAGGCTCCATGCTGTGCCTGCCTCCTGCATGGATGGCGTCTCTCTaGCCTCTGGCTCAGGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KQERKAIDSGSMLCLPPAWMASL*PLAQAH Trigger: ATGAGCCTGAGCCAGAGGGCAGAGAGACGCCATCCA...TGCAGGAGGCAGGCACAGCATGGAGCCTGAGTCAATAGCCTTGCGTTCCTGCTT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| 3UTR CAA 72 bp | ACCCTCCCTGGCAGAGAGGAACGTGACCCAAACATTTaGAGGTGCAAGGCCTTTGCATTGCAGGCTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLPGREERDPNI*RCKAFALQACW Trigger: CCAGCAAGCCTGCAATGCAAAGGCCTTGCACCTCAAAATGTTTGGGTCACGTTCCTCTCTGCCAGGGAGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS-3UTR GCA 90 bp | ACCTCCTCTTGGATGCATGTAACCCCACTTCACTTGTCATGGTTTAGGGAGGTGACCACTGATGACAGGTaGCGGGGCCGGTGGCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: TSSWMHVTPLHLSWFREVTTDDR*RGRWHL Trigger: TAAGTGCCACCGGCCCCGGCACCTGTCATCAGTGGT...CACCTCCCTAAACCATGACAAGTGAAGTGGGGTTACATGCATCCAAGAGGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS-3UTR GCA 90 bp | CTGTCCCTCTCTCTTCCCAACCTCTGGCTCACCGTGTTTCTGCCCTCTCCTGTCTGGTGTTTGTTGGGATaGCAGAATTGGACGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLPNLWLTVFLPSPVWCLLG*QNWTQK Trigger: CTTCTGCGTCCAATTCTGGCATCCCAACAAACACCA...GACAGGAGAGGGCAGAAACACGGTGAGCCAGAGGTTGGGAAGAGAGAGGGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGGAACGCAAGGCTATTGACTCAGGCTCCATGCTGTGCCTGCCTCCTGCAAGCACTGGTGTTTGTTaGGATGCCAGAATTGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: KQERKAIDSGSMLCLPPASTGVC*DARIGR Trigger: GCGTCCAATTCTGGCATCCCAACAAACACCAGTGCT...TGCAGGAGGCAGGCACAGCATGGAGCCTGAGTCAATAGCCTTGCGTTCCTGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| 3UTR CAA 72 bp | TGTACACACAGTGGGGTGACCAGCATCTCTGTCACCTaGAGCATGACACACTGGCTTGTGCAGAAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CTHSGVTSISVT*SMTHWLVQKPP Trigger: TGGAGGCTTCTGCACAAGCCAGTGTGTCATGCTCAAGGTGACAGAGATGCTGGTCACCCCACTGTGTGTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS-3UTR TCA 90 bp | GCATTGCAGGCTTGCTGGGTACTTTTAGGGAAGGGCTGGGTGGGGCTTTGGAGGAAACAATGTCCACCTTaGAGCACTGGTGTTTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALQACWVLLGKGWVGLWRKQCPP*STGVCW Trigger: CCAACAAACACCAGTGCTTCAAGGTGGACATTGTTT...CCTCCAAAGCCCCACCCAGCCCTTCCCTAAAAGTACCCAGCAAGCCTGCAATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTAGGAGCTGGCCTGAAGCAGGAACGCAAGGCTATTGACTCAGGCTCCATGCAGCAGGCTCAGGCCTaGTGTATAGGCAAAGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: LLGAGLKQERKAIDSGSMQQAQA*CIGKVL Trigger: AAGTACTTTGCCTATACAGCAGGCCTGAGCCTGCTG...CATGGAGCCTGAGTCAATAGCCTTGCGTTCCTGCTTCAGGCCAGCTCCTAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS-3UTR CCA 90 bp | ACCTCCTCTTGGATGCATGTAACCCCACTTCACTTGTCATGGTTTAGGGAGGTGGGTCAGACCTGGAGCTaGGCTGCTGTCAAGAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSSWMHVTPLHLSWFREVGQTWS*AAVKSG Trigger: TCCACTCTTGACAGCAGCCCAGCTCCAGGTCTGACC...CACCTCCCTAAACCATGACAAGTGAAGTGGGGTTACATGCATCCAAGAGGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAACCTGTTACAGCAACAGAAATGAAACTAGGACAGATGCCATCTCAGGGACGTCTCTCTGCCCTCTaGCTCAGGCTCATCCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: REPVTATEMKLGQMPSQGRLSAL*LRLIPQ Trigger: CTGCGGGATGAGCCTGAGCCAGAGGGCAGAGAGACG...TCCCTGAGATGGCATCTGTCCTAGTTTCATTTCTGTTGCTGTAACAGGTTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS-3UTR GCA 90 bp | GTGTTTCTGCCCTCTCCTGTCACAAGGTTAACTGGCACAGATGTCTCAGGGGACACCTCTGCATGCCATTaGAGCTCAGGAGCCAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: VFLPSPVTRLTGTDVSGDTSACH*SSGAKS Trigger: TGATTTGGCTCCTGAGCTGCAATGGCATGCAGAGGT...GTCCCCTGAGACATCTGTGCCAGTTAACCTTGTGACAGGAGAGGGCAGAAACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS-3UTR CCA 90 bp | ACCTCCTCTTGGATGCATGTAACCCCACTTCACTTGTCATGGTTTAGGGAGGTGATTAGTACACGTGGATaGCGTCTCTCTGCCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TSSWMHVTPLHLSWFREVISTRG*RLSALW Trigger: CCAGAGGGCAGAGAGACGCCATCCACGTGTACTAAT...CACCTCCCTAAACCATGACAAGTGAAGTGGGGTTACATGCATCCAAGAGGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS-3UTR TCA 90 bp | TGTACCTCCTCTTGGATGCATGTAACCCCACTTCACTTGTCATGGTTTAGGGAGAGGGCAGAGAACAGGTaGGGAAGACAAGGATGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CTSSWMHVTPLHLSWFRERAENR*GRQGWK Trigger: CTTCCATCCTTGTCTTCCTCACCTGTTCTCTGCCCT...CTCCCTAAACCATGACAAGTGAAGTGGGGTTACATGCATCCAAGAGGAGGTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAACCTGTTACAGCAACAGAAATGAAACTAGGACAGATGCCATCTCAGGGACAGAAGGGAGACCTCTaGATGCCATTGCAGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: REPVTATEMKLGQMPSQGQKGDL*MPLQLR Trigger: CCTGAGCTGCAATGGCATGCAGAGGTCTCCCTTCTG...TCCCTGAGATGGCATCTGTCCTAGTTTCATTTCTGTTGCTGTAACAGGTTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGGAGCACTTCATCTACAGAACCTCTGGAAATGGTCATCCATGCTGGGGAGTTGGGATGCCAGAATTaGACGCAGAAGAAAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KGSTSSTEPLEMVIHAGELGCQN*TQKKEA Trigger: GGCTTCTTTCTTCTGCGTCCAATTCTGGCATCCCAA...CTCCCCAGCATGGATGACCATTTCCAGAGGTTCTGTAGATGAAGTGCTCCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| 3UTR CAA 72 bp | CTCTATCCATTGGGAAACTCCATTTCCCAGACAGCCTaGCCCATGATGGGACCCAAAGTTAGGATCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LYPLGNSISQTA*PMMGPKVRICV Trigger: GACACAGATCCTAACTTTGGGTCCCATCATGGGCAAGGCTGTCTGGGAAATGGAGTTTCCCAATGGATAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| 3UTR CAA 72 bp | AGGGTGGTAAGGGTTAGAGACTTCTCTCCCTTTCTCTaGTACCTCCTCTTGGATGCATGTAACCCCACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RVVRVRDFSPFL*YLLLDACNPTS Trigger: TGAAGTGGGGTTACATGCATCCAAGAGGAGGTACAAGAGAAAGGGAGAGAAGTCTCTAACCCTTACCACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS-3UTR TCA 90 bp | TATCTGGGATGCGTGTCATGTCATGCCAGGAAAAGTCACACAATGTGCTGCAGGTATAGGCAAAGTACTTaGTTCTCCTCATCCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YLGCVSCHARKSHTMCCRYRQST*FSSSLH Trigger: ATGAAGGGATGAGGAGAATCAAGTACTTTGCCTATA...CCTGCAGCACATTGTGTGACTTTTCCTGGCATGACATGACACGCATCCCAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| 3UTR CAA 72 bp | AGGGGATGGACCTATGCATTTGTGCTCTTTCTGTTCTaGACTTTGTGTGTGATGTCACTAGCTGCTTACATT | + |
|
Preference number: 4 (lower is better) Translates to: RGWTYAFVLFLF*TLCVMSLAAYI Trigger: AATGTAAGCAGCTAGTGACATCACACACAAAGTCAAGAACAGAAAGAGCACAAATGCATAGGTCCATCCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| 3UTR CAA 72 bp | TGGACCTATGCATTTGTGCTCTTTCTGTTCTTGACTTaGTGTGTGATGTCACTAGCTGCTTACATTTATGCC | + |
|
Preference number: 4 (lower is better) Translates to: WTYAFVLFLFLT*CVMSLAAYIYA Trigger: GGCATAAATGTAAGCAGCTAGTGACATCACACACAAAGTCAAGAACAGAAAGAGCACAAATGCATAGGTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS CCA 90 bp | TCAGACCCCATCATTAGTACACGTGGATGGCGTCTCTCTGCCCTCTaGCTCAGGCTCATCCCGCAGTGCCCGCCCCAGCACAGCACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SDPIISTRGWRLSAL*LRLIPQCPPQHSTQ Trigger: CTGGGTGCTGTGCTGGGGCGGGCACTGCGGGATGAGCCTGAGCCAGAGGGCAGAGAGACGCCATCCACGTGTACTAATGATGGGGTCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS-3UTR CAA 90 bp | GTGTTTCTGCCCTCTCCTGTCACAAGGTTAACTGGCACAGATGTCTCAGGGGACAAGCACTGGTGTTTGTaGGGATGCCAGAATTGGACG | + |
|
Preference number: 5 (lower is better) Translates to: VFLPSPVTRLTGTDVSGDKHWCL*GCQNWT Trigger: CGTCCAATTCTGGCATCCCAACAAACACCAGTGCTT...GTCCCCTGAGACATCTGTGCCAGTTAACCTTGTGACAGGAGAGGGCAGAAACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCTCTTCCCAACCTCTGGCTCACCGTGTTTCTGCCCTCTCCTGTCACAAGGCCCAGGATAAGACTGTaGAAAACAATGTCCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSLPNLWLTVFLPSPVTRPRIRL*KTMSTL Trigger: CAAGGTGGACATTGTTTTCAACAGTCTTATCCTGGG...CCTTGTGACAGGAGAGGGCAGAAACACGGTGAGCCAGAGGTTGGGAAGAGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS-3UTR CAA 90 bp | CATGTCATGCCAGGAAAAGTCACACAATGTGCTGCAGGTGCGGTGATATGTGCAATTTTGGCAGAAATGTaGACTATGAGCAGGGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: HVMPGKVTQCAAGAVICAILAEM*TMSRGP Trigger: AGGGCCCCTGCTCATAGTCAACATTTCTGCCAAAAT...TGCACATATCACCGCACCTGCAGCACATTGTGTGACTTTTCCTGGCATGACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS-3UTR CAA 90 bp | CAGAACCTCTGGAAATGGTCATCCATGCTGGGGAGAAACTTATCAGTGACATGTGTTGGGATGCCAGAATaGGACGCAGAAGAAAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: QNLWKWSSMLGRNLSVTCVGMPE*DAEERS Trigger: GCTTCTTTCTTCTGCGTCCAATTCTGGCATCCCAAC...ACATGTCACTGATAAGTTTCTCCCCAGCATGGATGACCATTTCCAGAGGTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS GCA 90 bp | CTGTTGAAAACAATGTCCACCTTGAAGCACTGGTGTTTGTTGGGATaGCAGAATTGGACGCAGAAGAAAGAAGCCAGGAAGTTCATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLKTMSTLKHWCLLG*QNWTQKKEARKFIR Trigger: CCTGATGAACTTCCTGGCTTCTTTCTTCTGCGTCCAATTCTGGCATCCCAACAAACACCAGTGCTTCAAGGTGGACATTGTTTTCAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAACCTGTTACAGCAACAGAAATGAAACTAGGACAGATGCCATCTCAGGGATTGAAGCACTGGTGTTaGTTGGGATGCCAGAATTGG | + |
|
Preference number: 5 (lower is better) Translates to: REPVTATEMKLGQMPSQGLKHWC*LGCQNW Trigger: CCAATTCTGGCATCCCAACAAACACCAGTGCTTCAA...TCCCTGAGATGGCATCTGTCCTAGTTTCATTTCTGTTGCTGTAACAGGTTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS GCA 72 bp | CGTCTCTCTGCCCTCTGGCTCAGGCTCATCCCGCAGTaGCCGCCCCAGCACAGCACCCAGGGACTCCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RLSALWLRLIPQ*PPQHSTQGLLQ Trigger: CTGCAGGAGTCCCTGGGTGCTGTGCTGGGGCGGGCACTGCGGGATGAGCCTGAGCCAGAGGGCAGAGAGACG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS GCA 72 bp | GCACATAGACACAGAAGGGAGACCTCTGCATGCCATTaGAGCTCAGGAGCCAAATCACCAATGAGTTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: AHRHRRETSACH*SSGAKSPMSCL Trigger: CAGGCAACTCATTGGTGATTTGGCTCCTGAGCTGCAATGGCATGCAGAGGTCTCCCTTCTGTGTCTATGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS CAA 90 bp | CTGGTCAGGATCATGACCGGCATGAAGATCCCCAGGATAAGACTGTaGAAAACAATGTCCACCTTGAAGCACTGGTGTTTGTTGGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: LVRIMTGMKIPRIRL*KTMSTLKHWCLLGC Trigger: GCATCCCAACAAACACCAGTGCTTCAAGGTGGACATTGTTTTCAACAGTCTTATCCTGGGGATCTTCATGCCGGTCATGATCCTGACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS GCA 72 bp | ACAATGTCCACCTTGAAGCACTGGTGTTTGTTGGGATaGCAGAATTGGACGCAGAAGAAAGAAGCCAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: TMSTLKHWCLLG*QNWTQKKEARK Trigger: CTTCCTGGCTTCTTTCTTCTGCGTCCAATTCTGGCATCCCAACAAACACCAGTGCTTCAAGGTGGACATTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS CCA 72 bp | ACCTTGAAGCACTGGTGTTTGTTGGGATGCCAGAATTaGACGCAGAAGAAAGAAGCCAGGAAGTTCATCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TLKHWCLLGCQN*TQKKEARKFIR Trigger: CCTGATGAACTTCCTGGCTTCTTTCTTCTGCGTCCAATTCTGGCATCCCAACAAACACCAGTGCTTCAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS CAA 72 bp | CACCTTGAAGCACTGGTGTTTGTTGGGATGCCAGAATaGGACGCAGAAGAAAGAAGCCAGGAAGTTCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: HLEALVFVGMPE*DAEERSQEVHQ Trigger: CTGATGAACTTCCTGGCTTCTTTCTTCTGCGTCCAATTCTGGCATCCCAACAAACACCAGTGCTTCAAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS CAA 90 bp | GGCATGAAGATCCCCAGGATAAGACTGTTGAAAACAATGTCCACCTaGAAGCACTGGTGTTTGTTGGGATGCCAGAATTGGACGCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GMKIPRIRLLKTMST*KHWCLLGCQNWTQK Trigger: CTTCTGCGTCCAATTCTGGCATCCCAACAAACACCAGTGCTTCAAGGTGGACATTGTTTTCAACAGTCTTATCCTGGGGATCTTCATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS TCA 72 bp | TCAGCAGGCTCAGGCCTGCTGTATAGGCAAAGTACTTaGTTCTCCTCATCCCTTCATAGATTTTGGCAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: SAGSGLLYRQST*FSSSLHRFWQK Trigger: TTTCTGCCAAAATCTATGAAGGGATGAGGAGAATCAAGTACTTTGCCTATACAGCAGGCCTGAGCCTGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS CAA 72 bp | TTGAAAACAATGTCCACCTTGAAGCACTGGTGTTTGTaGGGATGCCAGAATTGGACGCAGAAGAAAGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LKTMSTLKHWCL*GCQNWTQKKEA Trigger: GGCTTCTTTCTTCTGCGTCCAATTCTGGCATCCCAACAAACACCAGTGCTTCAAGGTGGACATTGTTTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS CAA 72 bp | ATCATGACCGGCATGAAGATCCCCAGGATAAGACTGTaGAAAACAATGTCCACCTTGAAGCACTGGTGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: IMTGMKIPRIRL*KTMSTLKHWCL Trigger: CAAACACCAGTGCTTCAAGGTGGACATTGTTTTCAACAGTCTTATCCTGGGGATCTTCATGCCGGTCATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS CCA 72 bp | ATAAGACTGTTGAAAACAATGTCCACCTTGAAGCACTaGTGTTTGTTGGGATGCCAGAATTGGACGCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: IRLLKTMSTLKH*CLLGCQNWTQK Trigger: CTTCTGCGTCCAATTCTGGCATCCCAACAAACACCAGTGCTTCAAGGTGGACATTGTTTTCAACAGTCTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||
| CDS CAA 72 bp | CTGTTGAAAACAATGTCCACCTTGAAGCACTGGTGTTaGTTGGGATGCCAGAATTGGACGCAGAAGAAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LLKTMSTLKHWC*LGCQNWTQKKE Trigger: TTCTTTCTTCTGCGTCCAATTCTGGCATCCCAACAAACACCAGTGCTTCAAGGTGGACATTGTTTTCAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062163.8 |
||