Pregenerated sensors for MRGPRB8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050870Ensembl transcript IDs: ENSMUST00000056676.5
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GCAAATTTGTCCTATAAGTTCTCTTGTGTATCATCACAGCAGCTCTCAGTTGCAGCATTCCTGTGCATGTaGAAGCCCAGAAGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: ANLSYKFSCVSSQQLSVAAFLCM*KPRSCS Trigger: GCTGCAGCTTCTGGGCTTCCACATGCACAGGAATGC...TGCAACTGAGAGCTGCTGTGATGATACACAAGAGAACTTATAGGACAAATTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056676.5 |
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| CDS-3UTR TCA 90 bp | GCAAATTTGTCCTATAAGTTCTCTTGTGTATCATCACAGCAGCTCTCAGTTGCAAACCACAGAAGACCCTaGACAGCAGGGCTTGATTGG | + |
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Preference number: 4 (lower is better) Translates to: ANLSYKFSCVSSQQLSVANHRRP*TAGLDW Trigger: CCAATCAAGCCCTGCTGTTCAGGGTCTTCTGTGGTT...TGCAACTGAGAGCTGCTGTGATGATACACAAGAGAACTTATAGGACAAATTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056676.5 |
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| CDS-3UTR GCA 90 bp | GCAAATTTGTCCTATAAGTTCTCTTGTGTATCATCACAGCAGCTCTCAGTTGCACTGGTCACAGGTGTCTaGTGTGAACCACAGAAGACC | + |
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Preference number: 4 (lower is better) Translates to: ANLSYKFSCVSSQQLSVALVTGV*CEPQKT Trigger: GGTCTTCTGTGGTTCACAGCAGACACCTGTGACCAG...TGCAACTGAGAGCTGCTGTGATGATACACAAGAGAACTTATAGGACAAATTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056676.5 |
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| CDS-3UTR CCA 90 bp | GCAAATTTGTCCTATAAGTTCTCTTGTGTATCATCACAGCAGCTCTCAGTTGCAGGGCATGATACCAAGTaGGCCAAAGGACAGACAACC | + |
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Preference number: 4 (lower is better) Translates to: ANLSYKFSCVSSQQLSVAGHDTK*AKGQTT Trigger: GGTTGTCTGTCCTTTGGCCCACTTGGTATCATGCCC...TGCAACTGAGAGCTGCTGTGATGATACACAAGAGAACTTATAGGACAAATTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056676.5 |
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| CDS-3UTR TCA 90 bp | ATAAGGGCAAATTTGTCCTATAAGTTCTCTTGTGTATCATCACAGCAGCTCTCACACAGGTGTCTGCTGTaGACCACAGAAGACCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: IRANLSYKFSCVSSQQLSHRCLL*TTEDPE Trigger: TTCAGGGTCTTCTGTGGTTCACAGCAGACACCTGTG...TGAGAGCTGCTGTGATGATACACAAGAGAACTTATAGGACAAATTTGCCCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056676.5 |
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| CDS-3UTR GCA 90 bp | GGGCAAATTTGTCCTATAAGTTCTCTTGTGTATCATCACAGCAGCTCTCAGTTGGAGGAAGAGGAAGTTTaGCCCAGACAGGTTGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: GQICPISSLVYHHSSSQLEEEEV*PRQVED Trigger: ATCTTCAACCTGTCTGGGGCAAACTTCCTCTTCCTC...CAACTGAGAGCTGCTGTGATGATACACAAGAGAACTTATAGGACAAATTTGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056676.5 |
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| CDS-3UTR CCA 90 bp | AAAAGGATAAGGGCAAATTTGTCCTATAAGTTCTCTTGTGTATCATCACAGCAGTGGTCACAAGCAGCCTaGTCACAGGTGTCTGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: KRIRANLSYKFSCVSSQQWSQAA*SQVSAV Trigger: CACAGCAGACACCTGTGACCAGGCTGCTTGTGACCA...CTGCTGTGATGATACACAAGAGAACTTATAGGACAAATTTGCCCTTATCCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056676.5 |
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| CDS-3UTR TCA 90 bp | CCCAAAAGGATAAGGGCAAATTTGTCCTATAAGTTCTCTTGTGTATCATCACAGTTGCCCCAGACAGGTTaGAGATGTAGACAGAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: PKRIRANLSYKFSCVSSQLPQTG*RCRQRR Trigger: CCTTCTCTGTCTACATCTTCAACCTGTCTGGGGCAA...CTGTGATGATACACAAGAGAACTTATAGGACAAATTTGCCCTTATCCTTTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056676.5 |
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| CDS-3UTR TCA 90 bp | GCAAATTTGTCCTATAAGTTCTCTTGTGTATCATCACAGCAGCTCTCAGTTGCACTGAACAGCAGGGCTTaGTTGGATCTAGAAAGAACC | + |
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Preference number: 4 (lower is better) Translates to: ANLSYKFSCVSSQQLSVALNSRA*LDLERT Trigger: GGTTCTTTCTAGATCCAATCAAGCCCTGCTGTTCAG...TGCAACTGAGAGCTGCTGTGATGATACACAAGAGAACTTATAGGACAAATTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056676.5 |
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| CDS-3UTR TCA 90 bp | ATAAGGGCAAATTTGTCCTATAAGTTCTCTTGTGTATCATCACAGCAGCTCTCAGAAGCTGCAGCACTATaGCATTTCCTGTCAGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: IRANLSYKFSCVSSQQLSEAAAL*HFLSVQ Trigger: TTGGACTGACAGGAAATGTCATAGTGCTGCAGCTTC...TGAGAGCTGCTGTGATGATACACAAGAGAACTTATAGGACAAATTTGCCCTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056676.5 |
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| CDS-3UTR CCA 90 bp | AAAAGGATAAGGGCAAATTTGTCCTATAAGTTCTCTTGTGTATCATCACAGCAGCAGGGCTCTCTTGAATaGCTCTCTGAAGAATCAGCC | + |
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Preference number: 4 (lower is better) Translates to: KRIRANLSYKFSCVSSQQQGSLE*LSEESA Trigger: GGCTGATTCTTCAGAGAGCCATTCAAGAGAGCCCTG...CTGCTGTGATGATACACAAGAGAACTTATAGGACAAATTTGCCCTTATCCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056676.5 |
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| CDS-3UTR TCA 90 bp | CCCAAAAGGATAAGGGCAAATTTGTCCTATAAGTTCTCTTGTGTATCATCACAGCCAGTATGGTCACATTaGCAGAAAACAACGCCATGT | + |
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Preference number: 4 (lower is better) Translates to: PKRIRANLSYKFSCVSSQPVWSH*QKTTPC Trigger: ACATGGCGTTGTTTTCTGTCAATGTGACCATACTGG...CTGTGATGATACACAAGAGAACTTATAGGACAAATTTGCCCTTATCCTTTTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056676.5 |
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| CDS-3UTR GCA 90 bp | AAAAGGATAAGGGCAAATTTGTCCTATAAGTTCTCTTGTGTATCATCACAGCAGTGGAAGCCCAGAAGCTaGAGCACTATGACATTTCCT | + |
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Preference number: 4 (lower is better) Translates to: KRIRANLSYKFSCVSSQQWKPRS*STMTFP Trigger: AGGAAATGTCATAGTGCTGCAGCTTCTGGGCTTCCA...CTGCTGTGATGATACACAAGAGAACTTATAGGACAAATTTGCCCTTATCCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056676.5 |
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| CDS-3UTR TCA 90 bp | AGGGCAAATTTGTCCTATAAGTTCTCTTGTGTATCATCACAGCAGCTCTCAGTTAGAGCAGAGTACAAATaGCAGTTGATGTGTGTTTTG | + |
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Preference number: 4 (lower is better) Translates to: RANLSYKFSCVSSQQLSVRAEYK*QLMCVL Trigger: CAAAACACACATCAACTGTCATTTGTACTCTGCTCT...AACTGAGAGCTGCTGTGATGATACACAAGAGAACTTATAGGACAAATTTGCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056676.5 |
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| CDS-3UTR GCA 90 bp | GCAAATTTGTCCTATAAGTTCTCTTGTGTATCATCACAGCAGCTCTCAGTTGCACACTGGAATTGGCAGTaGTTAATTGAGCCAACAAAT | + |
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Preference number: 4 (lower is better) Translates to: ANLSYKFSCVSSQQLSVAHWNWQ*LIEPTN Trigger: ATTTGTTGGCTCAATTAAGCACTGCCAATTCCAGTG...TGCAACTGAGAGCTGCTGTGATGATACACAAGAGAACTTATAGGACAAATTTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056676.5 |
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| CDS-3UTR TCA 90 bp | AAAAGGATAAGGGCAAATTTGTCCTATAAGTTCTCTTGTGTATCATCACAGCAGAGTACAAATGACAGTTaGTGTGTGTTTTGGGCGTTG | + |
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Preference number: 4 (lower is better) Translates to: KRIRANLSYKFSCVSSQQSTNDS*CVFWAL Trigger: CAACGCCCAAAACACACATCAACTGTCATTTGTACT...CTGCTGTGATGATACACAAGAGAACTTATAGGACAAATTTGCCCTTATCCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056676.5 |
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| CDS-3UTR GCA 90 bp | ATAAGGGCAAATTTGTCCTATAAGTTCTCTTGTGTATCATCACAGCAGCTCTCAAGTAAAAGAAGCATATaGCAATCCCAAAGCCACAGA | + |
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Preference number: 4 (lower is better) Translates to: IRANLSYKFSCVSSQQLSSKRSI*QSQSHR Trigger: TCTGTGGCTTTGGGATTGGCATATGCTTCTTTTACT...TGAGAGCTGCTGTGATGATACACAAGAGAACTTATAGGACAAATTTGCCCTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056676.5 |
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| CDS TCA 90 bp | AGCAGAGTACAAATGACAGTTGATGTGTGTTTTGGGCGTTGGGCATaGTACCAAGTGGGCCAAAGGACAGACAACCAGTACTCCACACTA | + |
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Preference number: 5 (lower is better) Translates to: SRVQMTVDVCFGRWA*YQVGQRTDNQYSTL Trigger: TAGTGTGGAGTACTGGTTGTCTGTCCTTTGGCCCACTTGGTATCATGCCCAACGCCCAAAACACACATCAACTGTCATTTGTACTCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056676.5 |
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| CDS GCA 90 bp | AGACAACCAGTACTCCACACTAATGGCTGTGATCATGCTCACCCCTaGAAGGTATGCCAGTATGGTCACATTGACAGAAAACAACGCCAT | + |
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Preference number: 5 (lower is better) Translates to: RQPVLHTNGCDHAHP*KVCQYGHIDRKQRH Trigger: ATGGCGTTGTTTTCTGTCAATGTGACCATACTGGCATACCTTGCAGGGGTGAGCATGATCACAGCCATTAGTGTGGAGTACTGGTTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056676.5 |
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| CDS-3UTR CAA 90 bp | AGGGCAAATTTGTCCTATAAGTTCTCTTGTGTATCATCACAGCAGCTCTCAGTTTTCCTCAGGGCTCTCTaGAATGGCTCTCTGAAGAAT | + |
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Preference number: 5 (lower is better) Translates to: RANLSYKFSCVSSQQLSVFLRAL*NGSLKN Trigger: ATTCTTCAGAGAGCCATTCAAGAGAGCCCTGAGGAA...AACTGAGAGCTGCTGTGATGATACACAAGAGAACTTATAGGACAAATTTGCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056676.5 |
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| CDS-3UTR CAA 90 bp | CCCAAAAGGATAAGGGCAAATTTGTCCTATAAGTTCTCTTGTGTATCATCACAGAAGCAAATGATAGGATaGGCACAGCTGTTAACACCG | + |
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Preference number: 5 (lower is better) Translates to: PKRIRANLSYKFSCVSSQKQMIG*AQLLTP Trigger: CGGTGTTAACAGCTGTGCCAATCCTATCATTTGCTT...CTGTGATGATACACAAGAGAACTTATAGGACAAATTTGCCCTTATCCTTTTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056676.5 |
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| CDS-3UTR CAA 90 bp | AGGGCAAATTTGTCCTATAAGTTCTCTTGTGTATCATCACAGCAGCTCTCAGTTCGGATAGTAGGAGAATaGTCTCATAAAAATAACCAC | + |
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Preference number: 5 (lower is better) Translates to: RANLSYKFSCVSSQQLSVRIVGE*SHKNNH Trigger: GTGGTTATTTTTATGAGACAATTCTCCTACTATCCG...AACTGAGAGCTGCTGTGATGATACACAAGAGAACTTATAGGACAAATTTGCCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056676.5 |
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| CDS TCA 72 bp | CAAATGACAGTTGATGTGTGTTTTGGGCGTTGGGCATaGTACCAAGTGGGCCAAAGGACAGACAACCAGTAC | + |
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Preference number: 6 (lower is better) Translates to: QMTVDVCFGRWA*YQVGQRTDNQY Trigger: GTACTGGTTGTCTGTCCTTTGGCCCACTTGGTATCATGCCCAACGCCCAAAACACACATCAACTGTCATTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056676.5 |
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| CDS GCA 72 bp | AGAATCAGCCTGAGAGTCCCACACTGGAATTGGCAGTaGTTAATTGAGCCAACAAATAAGCAAATGATAGGA | + |
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Preference number: 6 (lower is better) Translates to: RISLRVPHWNWQ*LIEPTNKQMIG Trigger: TCCTATCATTTGCTTATTTGTTGGCTCAATTAAGCACTGCCAATTCCAGTGTGGGACTCTCAGGCTGATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056676.5 |
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| CDS CAA 72 bp | TGCTTAATTGAGCCAACAAATAAGCAAATGATAGGATaGGCACAGCTGTTAACACCGGATAGTAGGAGAATT | + |
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Preference number: 6 (lower is better) Translates to: CLIEPTNKQMIG*AQLLTPDSRRI Trigger: AATTCTCCTACTATCCGGTGTTAACAGCTGTGCCAATCCTATCATTTGCTTATTTGTTGGCTCAATTAAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056676.5 |
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