Pregenerated sensors for MRGPRB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070547Ensembl transcript IDs: ENSMUST00000094384.4, ENSMUST00000188095.2, ENSMUST00000188918.2
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGACAAAGTCAACACTCAACCATGGGAAGCTAAGTAGGACACTGTaGAAGGAAGAAAAGAGGACAGACACTCTCAACCTTTTCATGAGC | + |
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Preference number: 1 (lower is better) Translates to: MTKSTLNHGKLSRTL*KEEKRTDTLNLFMS Trigger: GCTCATGAAAAGGTTGAGAGTGTCTGTCCTCTTTTCTTCCTTTCACAGTGTCCTACTTAGCTTCCCATGGTTGAGTGTTGACTTTGTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| 3UTR TCA 90 bp | TGTGACATGGGAAGCCTAGCTATTTATTCAGGGCTGGTGAAGTTATaGATTTTTGGAGGGAAATCTACAACCATTGCTGTATTCATTAAC | + |
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Preference number: 1 (lower is better) Translates to: CDMGSLAIYSGLVKL*IFGGKSTTIAVFIN Trigger: GTTAATGAATACAGCAATGGTTGTAGATTTCCCTCCAAAAATTCATAACTTCACCAGCCCTGAATAAATAGCTAGGCTTCCCATGTCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| 3UTR TCA 90 bp | ATTCATGTACCAGAACATACCATGCAAGCTTCTAAAGGAAGGAAGTaGTTAGTAGTCATGTACAGTTATGATGCCTACAAATATCATCAA | + |
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Preference number: 1 (lower is better) Translates to: IHVPEHTMQASKGRK*LVVMYSYDAYKYHQ Trigger: TTGATGATATTTGTAGGCATCATAACTGTACATGACTACTAATCACTTCCTTCCTTTAGAAGCTTGCATGGTATGTTCTGGTACATGAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| 3UTR-3UTR GCA 90 bp | CATAGCCAGAAGCCTGAGAAGAGGCAGACAGGTTGGCATGGCAATGGAGCAGTTTCTGAGCAAGATAGCTaGAAAAATACTGTACTCAGT | + |
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Preference number: 2 (lower is better) Translates to: HSQKPEKRQTGWHGNGAVSEQDS*KNTVLS Trigger: ACTGAGTACAGTATTTTTGCAGCTATCTTGCTCAGA...AACTGCTCCATTGCCATGCCAACCTGTCTGCCTCTTCTCAGGCTTCTGGCTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| 3UTR-3UTR GCA 90 bp | AACTGCGGGAGTCACAAACAGAACATGATTACTCTACTGTTAAGAACCCGGGTATGGCAATGGAGCAGTTaGCAGAAGCTTATATCTGAC | + |
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Preference number: 2 (lower is better) Translates to: NCGSHKQNMITLLLRTRVWQWSS*QKLISD Trigger: GTCAGATATAAGCTTCTGGCAACTGCTCCATTGCCA...TACCCGGGTTCTTAACAGTAGAGTAATCATGTTCTGTTTGTGACTCCCGCAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| 3UTR-3UTR CCA 90 bp | CACATTTTAATCCATCCCAAACAGTTCCACCAATCTGGGGCCAAGAATTCCAAAGGGATTTGTCAATTGTaGTCAACACCTCTCCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: HILIHPKQFHQSGAKNSKGICQL*STPLLD Trigger: GTCCAGGAGAGGTGTTGACCACAATTGACAAATCCC...TTTGGAATTCTTGGCCCCAGATTGGTGGAACTGTTTGGGATGGATTAAAATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| 3UTR-3UTR CCA 90 bp | AACTGCGGGAGTCACAAACAGAACATGATTACTCTACTGTTAAGAACCCGGGTAATGGTGAGGAAATACTaGGCCAAGCAAAAGGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: NCGSHKQNMITLLLRTRVMVRKY*AKQKEK Trigger: TTTCTCCTTTTGCTTGGCCCAGTATTTCCTCACCAT...TACCCGGGTTCTTAACAGTAGAGTAATCATGTTCTGTTTGTGACTCCCGCAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| 3UTR-3UTR TCA 90 bp | TTTCCCACATACACAGGCACAGATCGTACATTACCATCCATTCCAAAAGAGGAACTCTCAACCTTTTCATaGGCATGGATATTGATGGAT | + |
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Preference number: 2 (lower is better) Translates to: FPTYTGTDRTLPSIPKEELSTFS*AWILMD Trigger: ATCCATCAATATCCATGCTCATGAAAAGGTTGAGAG...TTCCTCTTTTGGAATGGATGGTAATGTACGATCTGTGCCTGTGTATGTGGGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| 3UTR-3UTR CCA 90 bp | AACTGCGGGAGTCACAAACAGAACATGATTACTCTACTGTTAAGAACCCGGGTAATTCCAAAAGAGGAATaGAGACATGGTGAGGAAATA | + |
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Preference number: 2 (lower is better) Translates to: NCGSHKQNMITLLLRTRVIPKEE*RHGEEI Trigger: TATTTCCTCACCATGTCTCCATTCCTCTTTTGGAAT...TACCCGGGTTCTTAACAGTAGAGTAATCATGTTCTGTTTGTGACTCCCGCAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| 3UTR-3UTR TCA 90 bp | ATAAGGAACAATGAAGGAATCAATTGTGAAACTGCGGGAGTCACAAACAGAACACAACTTCTACAACATTaGCTACTTCCCCAACTGAGT | + |
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Preference number: 2 (lower is better) Translates to: IRNNEGINCETAGVTNRTQLLQH*LLPQLS Trigger: ACTCAGTTGGGGAAGTAGTCAATGTTGTAGAAGTTG...TGTTCTGTTTGTGACTCCCGCAGTTTCACAATTGATTCCTTCATTGTTCCTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| 3UTR-3UTR TCA 90 bp | CAAATGCTATCAAGGCATAATAATCCTAAGGCTGCACAGATACCTCACATAACTAATAGTACTGGCTTTTaGAACCTCAAAGATTACCCC | + |
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Preference number: 2 (lower is better) Translates to: QMLSRHNNPKAAQIPHITNSTGF*NLKDYP Trigger: GGGGTAATCTTTGAGGTTTCAAAAGCCAGTACTATT...AGTTATGTGAGGTATCTGTGCAGCCTTAGGATTATTATGCCTTGATAGCATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| 3UTR CAA 90 bp | CAATCAACTTCTACAACATTGACTACTTCCCCAACTGAGTTAACCTaGGGTCATCAACTAAACAACATTATGAAAATGCCACAAAGTGAT | + |
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Preference number: 2 (lower is better) Translates to: QSTSTTLTTSPTELT*GHQLNNIMKMPQSD Trigger: ATCACTTTGTGGCATTTTCATAATGTTGTTTAGTTGATGACCCAAGGTTAACTCAGTTGGGGAAGTAGTCAATGTTGTAGAAGTTGATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094384.4 ENSMUST00000188095.2 |
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| 3UTR CCA 72 bp | CCTCATAGCCAGAAGCCTGAGAAGAGGCAGACAGGTTaGCATGGCAATGGAGCAGTTGCCAGAAGCTTATAT | + |
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Preference number: 3 (lower is better) Translates to: PHSQKPEKRQTG*HGNGAVARSLY Trigger: ATATAAGCTTCTGGCAACTGCTCCATTGCCATGCCAACCTGTCTGCCTCTTCTCAGGCTTCTGGCTATGAGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| 3UTR TCA 72 bp | TCAACACTCAACCATGGGAAGCTAAGTAGGACACTGTaGAAGGAAGAAAAGAGGACAGACACTCTCAACCTT | + |
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Preference number: 3 (lower is better) Translates to: STLNHGKLSRTL*KEEKRTDTLNL Trigger: AAGGTTGAGAGTGTCTGTCCTCTTTTCTTCCTTTCACAGTGTCCTACTTAGCTTCCCATGGTTGAGTGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| 3UTR CCA 72 bp | ACACATTTTAATCCATCCCAAACAGTTCCACCAATCTaGGGCCAAGAATTCCAAAATGAGACTGTAGAGGAA | + |
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Preference number: 3 (lower is better) Translates to: THFNPSQTVPPI*GQEFQNETVEE Trigger: TTCCTCTACAGTCTCATTTTGGAATTCTTGGCCCCAGATTGGTGGAACTGTTTGGGATGGATTAAAATGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| 3UTR-3UTR CAA 90 bp | ATAAGGAACAATGAAGGAATCAATTGTGAAACTGCGGGAGTCACAAACAGAACATCAACTTCTACAACATaGACTACTTCCCCAACTGAG | + |
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Preference number: 3 (lower is better) Translates to: IRNNEGINCETAGVTNRTSTSTT*TTSPTE Trigger: CTCAGTTGGGGAAGTAGTCAATGTTGTAGAAGTTGA...TGTTCTGTTTGTGACTCCCGCAGTTTCACAATTGATTCCTTCATTGTTCCTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| 3UTR-3UTR CAA 90 bp | AATGGAGTTGGTAAAGCTCTGAGCAAGATAGCTGCAAAAATACTGTACTCAGTATCAACTTCTACAACATaGACTACTTCCCCAACTGAG | + |
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Preference number: 3 (lower is better) Translates to: NGVGKALSKIAAKILYSVSTSTT*TTSPTE Trigger: CTCAGTTGGGGAAGTAGTCAATGTTGTAGAAGTTGA...TACTGAGTACAGTATTTTTGCAGCTATCTTGCTCAGAGCTTTACCAACTCCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094384.4 ENSMUST00000188095.2 |
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| 3UTR TCA 72 bp | GGAAGCCTAGCTATTTATTCAGGGCTGGTGAAGTTATaGATTTTTGGAGGGAAATCTACAACCATTGCTGTA | + |
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Preference number: 3 (lower is better) Translates to: GSLAIYSGLVKL*IFGGKSTTIAV Trigger: TACAGCAATGGTTGTAGATTTCCCTCCAAAAATTCATAACTTCACCAGCCCTGAATAAATAGCTAGGCTTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| 3UTR TCA 72 bp | AGGAAGAAAAGAGGACAGACACTCTCAACCTTTTCATaGGCATGGATATTGATGGATCACATTATTAGACTG | + |
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Preference number: 3 (lower is better) Translates to: RKKRGQTLSTFS*AWILMDHIIRL Trigger: CAGTCTAATAATGTGATCCATCAATATCCATGCTCATGAAAAGGTTGAGAGTGTCTGTCCTCTTTTCTTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| 3UTR TCA 72 bp | CCAGAACATACCATGCAAGCTTCTAAAGGAAGGAAGTaGTTAGTAGTCATGTACAGTTATGATGCCTACAAA | + |
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Preference number: 3 (lower is better) Translates to: PEHTMQASKGRK*LVVMYSYDAYK Trigger: TTTGTAGGCATCATAACTGTACATGACTACTAATCACTTCCTTCCTTTAGAAGCTTGCATGGTATGTTCTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| CDS-3UTR CCA 90 bp | CATAGCCAGAAGCCTGAGAAGAGGCAGACAGGTTGGCATGGCAATGGAGCAGTTTGGTCACATACAACCTaGTCACAGGAACCTTGTGTA | + |
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Preference number: 4 (lower is better) Translates to: HSQKPEKRQTGWHGNGAVWSHTT*SQEPCV Trigger: TACACAAGGTTCCTGTGACCAGGTTGTATGTGACCA...AACTGCTCCATTGCCATGCCAACCTGTCTGCCTCTTCTCAGGCTTCTGGCTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| CDS-3UTR TCA 90 bp | CACATTTTAATCCATCCCAAACAGTTCCACCAATCTGGGGCCAAGAATTCCAAACAGCACCAGCAAGGTTaGGGATGTAGACAGAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: HILIHPKQFHQSGAKNSKQHQQG*GCRQRR Trigger: CCTTCTCTGTCTACATCCTCAACCTTGCTGGTGCTG...TTTGGAATTCTTGGCCCCAGATTGGTGGAACTGTTTGGGATGGATTAAAATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| CDS-3UTR GCA 90 bp | AACTGCGGGAGTCACAAACAGAACATGATTACTCTACTGTTAAGAACCCGGGTATCCTCAGGAGAGTCTTaGATGGCTCTCTGCAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: NCGSHKQNMITLLLRTRVSSGES*MALCRR Trigger: TCTTCTGCAGAGAGCCATGCAAGACTCTCCTGAGGA...TACCCGGGTTCTTAACAGTAGAGTAATCATGTTCTGTTTGTGACTCCCGCAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| CDS-3UTR CCA 90 bp | TTTCCCACATACACAGGCACAGATCGTACATTACCATCCATTCCAAAAGAGGAACAGGAGAGTCTTGCATaGCTCTCTGCAGAAGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: FPTYTGTDRTLPSIPKEEQESLA*LSAEEA Trigger: AGCTTCTTCTGCAGAGAGCCATGCAAGACTCTCCTG...TTCCTCTTTTGGAATGGATGGTAATGTACGATCTGTGCCTGTGTATGTGGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| CDS-3UTR CCA 90 bp | ATAAGGAACAATGAAGGAATCAATTGTGAAACTGCGGGAGTCACAAACAGAACAGCACCAAGGCCAGACTaGATCCCAAGAGAACCACAA | + |
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Preference number: 4 (lower is better) Translates to: IRNNEGINCETAGVTNRTAPRPD*IPREPQ Trigger: TTGTGGTTCTCTTGGGATCCAGTCTGGCCTTGGTGC...TGTTCTGTTTGTGACTCCCGCAGTTTCACAATTGATTCCTTCATTGTTCCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| CDS-3UTR GCA 90 bp | AATGGAGTTGGTAAAGCTCTGAGCAAGATAGCTGCAAAAATACTGTACTCAGTACAGAGAAGGCATTCCTaGTCATCTGGAAGCCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: NGVGKALSKIAAKILYSVQRRHS*SSGSPE Trigger: TTCTGGGCTTCCAGATGAGCAGGAATGCCTTCTCTG...TACTGAGTACAGTATTTTTGCAGCTATCTTGCTCAGAGCTTTACCAACTCCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| CDS-3UTR CCA 90 bp | AATGGAGTTGGTAAAGCTCTGAGCAAGATAGCTGCAAAAATACTGTACTCAGTACAGGAGAGTCTTGCATaGCTCTCTGCAGAAGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: NGVGKALSKIAAKILYSVQESLA*LSAEEA Trigger: AGCTTCTTCTGCAGAGAGCCATGCAAGACTCTCCTG...TACTGAGTACAGTATTTTTGCAGCTATCTTGCTCAGAGCTTTACCAACTCCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094384.4 ENSMUST00000188095.2 |
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| CDS-3UTR TCA 90 bp | CAAATGCTATCAAGGCATAATAATCCTAAGGCTGCACAGATACCTCACATAACTTCTGCAGAAGAAGCTTaGGAGTCTTCCGTTGAAACC | + |
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Preference number: 4 (lower is better) Translates to: QMLSRHNNPKAAQIPHITSAEEA*ESSVET Trigger: GGTTTCAACGGAAGACTCTCAAGCTTCTTCTGCAGA...AGTTATGTGAGGTATCTGTGCAGCCTTAGGATTATTATGCCTTGATAGCATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| CDS-3UTR GCA 90 bp | TTTCCCACATACACAGGCACAGATCGTACATTACCATCCATTCCAAAAGAGGAACATTTTCAGGAGTGGTaGAATCTCAGTTCTTTGCTC | + |
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Preference number: 4 (lower is better) Translates to: FPTYTGTDRTLPSIPKEEHFQEW*NLSSLL Trigger: GAGCAAAGAACTGAGATTGCACCACTCCTGAAAATG...TTCCTCTTTTGGAATGGATGGTAATGTACGATCTGTGCCTGTGTATGTGGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| CDS-3UTR GCA 90 bp | CAAATGCTATCAAGGCATAATAATCCTAAGGCTGCACAGATACCTCACATAACTTCTTGCATGGCTCTCTaGAGAAGAAGCTTGAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: QMLSRHNNPKAAQIPHITSCMAL*RRSLRV Trigger: GACTCTCAAGCTTCTTCTGCAGAGAGCCATGCAAGA...AGTTATGTGAGGTATCTGTGCAGCCTTAGGATTATTATGCCTTGATAGCATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| CDS-3UTR GCA 90 bp | AATGGAGTTGGTAAAGCTCTGAGCAAGATAGCTGCAAAAATACTGTACTCAGTATCTTGCATGGCTCTCTaGAGAAGAAGCTTGAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: NGVGKALSKIAAKILYSVSCMAL*RRSLRV Trigger: GACTCTCAAGCTTCTTCTGCAGAGAGCCATGCAAGA...TACTGAGTACAGTATTTTTGCAGCTATCTTGCTCAGAGCTTTACCAACTCCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094384.4 ENSMUST00000188095.2 |
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| CDS-3UTR TCA 90 bp | ATAAGGAACAATGAAGGAATCAATTGTGAAACTGCGGGAGTCACAAACAGAACAAAAGCACAGTACATATaGCAGCTGATGTGTGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: IRNNEGINCETAGVTNRTKAQYI*QLMCAL Trigger: CAAGGCACACATCAGCTGTCATATGTACTGTGCTTT...TGTTCTGTTTGTGACTCCCGCAGTTTCACAATTGATTCCTTCATTGTTCCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| CDS-3UTR TCA 90 bp | CAATATCAATCAACTTCTACAACATTGACTACTTCCCCAACTGAGTTAACCTTGTCTGCAGAAGAAGCTTaGGAGTCTTCCGTTGAAACC | + |
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Preference number: 4 (lower is better) Translates to: QYQSTSTTLTTSPTELTLSAEEA*ESSVET Trigger: GGTTTCAACGGAAGACTCTCAAGCTTCTTCTGCAGA...CAAGGTTAACTCAGTTGGGGAAGTAGTCAATGTTGTAGAAGTTGATTGATATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094384.4 ENSMUST00000188095.2 |
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| CDS-3UTR TCA 90 bp | CAATATCAATCAACTTCTACAACATTGACTACTTCCCCAACTGAGTTAACCTTGTTCTCTAGGTCTTCTTaGGGAACCCATCTCTCCACA | + |
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Preference number: 4 (lower is better) Translates to: QYQSTSTTLTTSPTELTLFSRSS*GTHLST Trigger: TGTGGAGAGATGGGTTCCTCAAGAAGACCTAGAGAA...CAAGGTTAACTCAGTTGGGGAAGTAGTCAATGTTGTAGAAGTTGATTGATATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094384.4 ENSMUST00000188095.2 |
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| CDS-3UTR CCA 90 bp | AATGGAGTTGGTAAAGCTCTGAGCAAGATAGCTGCAAAAATACTGTACTCAGTAGAAACCATAACACTGTaGCATTTCCAACCAGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: NGVGKALSKIAAKILYSVETITL*HFQPAQ Trigger: TTGGGCTGGTTGGAAATGCCACAGTGTTATGGTTTC...TACTGAGTACAGTATTTTTGCAGCTATCTTGCTCAGAGCTTTACCAACTCCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| CDS-3UTR CCA 90 bp | CAATATCAATCAACTTCTACAACATTGACTACTTCCCCAACTGAGTTAACCTTGGCATTCCTGCTCATCTaGAAGCCCAGAAACCATAAC | + |
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Preference number: 4 (lower is better) Translates to: QYQSTSTTLTTSPTELTLAFLLI*KPRNHN Trigger: GTTATGGTTTCTGGGCTTCCAGATGAGCAGGAATGC...CAAGGTTAACTCAGTTGGGGAAGTAGTCAATGTTGTAGAAGTTGATTGATATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| CDS-3UTR CCA 90 bp | CAATATCAATCAACTTCTACAACATTGACTACTTCCCCAACTGAGTTAACCTTGGTCCATTTTCAGGAGTaGTGCAATCTCAGTTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: QYQSTSTTLTTSPTELTLVHFQE*CNLSSL Trigger: CAAAGAACTGAGATTGCACCACTCCTGAAAATGGAC...CAAGGTTAACTCAGTTGGGGAAGTAGTCAATGTTGTAGAAGTTGATTGATATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| CDS-3UTR CCA 90 bp | AATGGAGTTGGTAAAGCTCTGAGCAAGATAGCTGCAAAAATACTGTACTCAGTATTAATGGTCCAGTCTTaGATGACTAAGTCCATTTTC | + |
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Preference number: 4 (lower is better) Translates to: NGVGKALSKIAAKILYSVLMVQS*MTKSIF Trigger: GAAAATGGACTTAGTCATCCAAGACTGGACCATTAA...TACTGAGTACAGTATTTTTGCAGCTATCTTGCTCAGAGCTTTACCAACTCCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| 3UTR CAA 72 bp | TACTCGCTCGTGAAATGGTATAAATTTAAAACAAGTTaGATATCAAGGGAACCTGTTATAGAGGACCTGATT | + |
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Preference number: 4 (lower is better) Translates to: YSLVKWYKFKTS*ISREPVIEDLI Trigger: AATCAGGTCCTCTATAACAGGTTCCCTTGATATCAAACTTGTTTTAAATTTATACCATTTCACGAGCGAGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| CDS TCA 90 bp | AGCTCTCAGTCCCTTCCAGACAGTTTTTATTTCTCTAGGTCTTCTTaGGGAACCCATCTCTCCACATTCTTCCTCCTCAGGAGAGTCTTG | + |
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Preference number: 5 (lower is better) Translates to: SSQSLPDSFYFSRSS*GTHLSTFFLLRRVL Trigger: CAAGACTCTCCTGAGGAGGAAGAATGTGGAGAGATGGGTTCCTCAAGAAGACCTAGAGAAATAAAAACTGTCTGGAAGGGACTGAGAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094384.4 ENSMUST00000188095.2 |
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| CDS-3UTR CAA 90 bp | AATGGAGTTGGTAAAGCTCTGAGCAAGATAGCTGCAAAAATACTGTACTCAGTACTCCTCAGGAGAGTCTaGCATGGCTCTCTGCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: NGVGKALSKIAAKILYSVLLRRV*HGSLQK Trigger: CTTCTGCAGAGAGCCATGCAAGACTCTCCTGAGGAG...TACTGAGTACAGTATTTTTGCAGCTATCTTGCTCAGAGCTTTACCAACTCCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094384.4 ENSMUST00000188095.2 |
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| CDS-3UTR CAA 90 bp | GGCTGCACAGATACCTCACATAACTCTGTAGTAATCAACAGATCTCCAATTAGACTGGTCACAGGAACCTaGTGTAAGCCACAGAAGATG | + |
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Preference number: 5 (lower is better) Translates to: GCTDTSHNSVVINRSPIRLVTGT*CKPQKM Trigger: CATCTTCTGTGGCTTACACAAGGTTCCTGTGACCAG...TCTAATTGGAGATCTGTTGATTACTACAGAGTTATGTGAGGTATCTGTGCAGCC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| CDS-3UTR CAA 90 bp | TTTCCCACATACACAGGCACAGATCGTACATTACCATCCATTCCAAAAGAGGAAGATATTCCATTGTCATaGCTTTCTTTCAGTGCTGTA | + |
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Preference number: 5 (lower is better) Translates to: FPTYTGTDRTLPSIPKEEDIPLS*LSFSAV Trigger: TACAGCACTGAAAGAAAGCAATGACAATGGAATATC...TTCCTCTTTTGGAATGGATGGTAATGTACGATCTGTGCCTGTGTATGTGGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| CDS TCA 72 bp | TCAACACCAGGGACAAGACCCAAAGCACAGTACATATaGCAGCTGATGTGTGCCTTGGGCGTTGGCAGCGGT | + |
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Preference number: 6 (lower is better) Translates to: STPGTRPKAQYI*QLMCALGVGSG Trigger: ACCGCTGCCAACGCCCAAGGCACACATCAGCTGTCATATGTACTGTGCTTTGGGTCTTGTCCCTGGTGTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| CDS TCA 72 bp | CAGGAGAGTCTTGCATGGCTCTCTGCAGAAGAAGCTTaGGAGTCTTCCGTTGAAACCGATGGTGCCAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: QESLAWLSAEEA*ESSVETDGASK Trigger: CTTGCTGGCACCATCGGTTTCAACGGAAGACTCTCAAGCTTCTTCTGCAGAGAGCCATGCAAGACTCTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188918.2 |
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| CDS TCA 72 bp | CAGGAGAGTCTTGCATGGCTCTCTGCAGAAGAAGCTTaGGAGTCTTCCGTTGAAACCGATGGTGCCTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: QESLAWLSAEEA*ESSVETDGAFA Trigger: AGCAAAGGCACCATCGGTTTCAACGGAAGACTCTCAAGCTTCTTCTGCAGAGAGCCATGCAAGACTCTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188095.2 |
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| CDS CAA 72 bp | CATGGCTCTCTGCAGAAGAAGCTTGAGAGTCTTCCGTaGAAACCGATGGTGCCTAATGGAGCCAACAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: HGSLQKKLESLP*KPMVPNGANKE Trigger: TTCCTTGTTGGCTCCATTAGGCACCATCGGTTTCAACGGAAGACTCTCAAGCTTCTTCTGCAGAGAGCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094384.4 |
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| CDS CCA 72 bp | CTTTCTTTCAGTGCTGTAATATTAATGGTCCAGTCTTaGATGACTAAGTCCATTTTCAGGAGTGGTGCAATC | + |
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Preference number: 6 (lower is better) Translates to: LSFSAVILMVQS*MTKSIFRSGAI Trigger: GATTGCACCACTCCTGAAAATGGACTTAGTCATCCAAGACTGGACCATTAATATTACAGCACTGAAAGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094384.4 ENSMUST00000188918.2 |
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| CDS CAA 90 bp | GTCATGGTACGAGACACAACTTCACAAAATGATATTCCATTGTCATaGCTTTCTTTCAGTGCTGTAATATTAATGGTCCAGTCTTGGATG | + |
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Preference number: 6 (lower is better) Translates to: VMVRDTTSQNDIPLS*LSFSAVILMVQSWM Trigger: CATCCAAGACTGGACCATTAATATTACAGCACTGAAAGAAAGCAATGACAATGGAATATCATTTTGTGAAGTTGTGTCTCGTACCATGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094384.4 ENSMUST00000188918.2 |
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| CDS CAA 72 bp | CGAGACACAACTTCACAAAATGATATTCCATTGTCATaGCTTTCTTTCAGTGCTGTAATATTAATGGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: RDTTSQNDIPLS*LSFSAVILMVQ Trigger: CTGGACCATTAATATTACAGCACTGAAAGAAAGCAATGACAATGGAATATCATTTTGTGAAGTTGTGTCTCG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094384.4 ENSMUST00000188918.2 |
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