Pregenerated sensors for MRGPRA9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074111Ensembl transcript IDs: ENSMUST00000098436.4, ENSMUST00000179005.3
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TGCAGCAGGGAAGTGCTCACTCCAAAGCTACCTCCGAGGTCCAGGCAGAGGCTCGCTTCATCCGCCCAGTaGCACAGAACAACCTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: CSREVLTPKLPPRSRQRLASSAQ*HRTTWP Trigger: TGGCCAGGTTGTTCTGTGGCACTGGGCGGATGAAGC...GAGCCTCTGCCTGGACCTCGGAGGTAGCTTTGGAGTGAGCACTTCCCTGCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179005.3 |
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| CDS-3UTR CCA 90 bp | GCAGGGAAGTGCTCACTCCAAAGCTACCTCCGAGGTCCAGGCAGAGGCTCTTCAGTGTGTTCTGGGCGGTaGCAGCGATACCAGATGGGG | + |
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Preference number: 4 (lower is better) Translates to: AGKCSLQSYLRGPGRGSSVCSGR*QRYQMG Trigger: CCCCATCTGGTATCGCTGCCACCGCCCAGAACACAC...TGAAGAGCCTCTGCCTGGACCTCGGAGGTAGCTTTGGAGTGAGCACTTCCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179005.3 |
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| CDS-3UTR CCA 90 bp | CAGCAGGGAAGTGCTCACTCCAAAGCTACCTCCGAGGTCCAGGCAGAGGCTCTTTGCCACAGAACAACCTaGCCAGCAGAGCCAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: QQGSAHSKATSEVQAEALCHRTT*PAEPGW Trigger: CCAGCCTGGCTCTGCTGGCCAGGTTGTTCTGTGGCA...AAGAGCCTCTGCCTGGACCTCGGAGGTAGCTTTGGAGTGAGCACTTCCCTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179005.3 |
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| CDS-3UTR CCA 90 bp | TGCAGCAGGGAAGTGCTCACTCCAAAGCTACCTCCGAGGTCCAGGCAGAGGCTCCCAGCAGAGCCAGGCTaGACACACAGAGGACTACAA | + |
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Preference number: 4 (lower is better) Translates to: CSREVLTPKLPPRSRQRLPAEPG*THRGLQ Trigger: TTGTAGTCCTCTGTGTGTCCAGCCTGGCTCTGCTGG...GAGCCTCTGCCTGGACCTCGGAGGTAGCTTTGGAGTGAGCACTTCCCTGCTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179005.3 |
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| CDS-3UTR TCA 90 bp | AGCAGGGAAGTGCTCACTCCAAAGCTACCTCCGAGGTCCAGGCAGAGGCTCTTCTGGGTGAGGAGAACGTaGGAAGTTTCTGCGTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: SREVLTPKLPPRSRQRLFWVRRT*EVSAWK Trigger: CTTCCACGCAGAAACTTCTCACGTTCTCCTCACCCA...GAAGAGCCTCTGCCTGGACCTCGGAGGTAGCTTTGGAGTGAGCACTTCCCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179005.3 |
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| CDS-3UTR TCA 90 bp | CAGCAGGGAAGTGCTCACTCCAAAGCTACCTCCGAGGTCCAGGCAGAGGCTCTTTTGGATTTGTTGTTGTaGGTGCCATTGTGGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: QQGSAHSKATSEVQAEALLDLLL*VPLWRL Trigger: CAGCCTCCACAATGGCACTCACAACAACAAATCCAA...AAGAGCCTCTGCCTGGACCTCGGAGGTAGCTTTGGAGTGAGCACTTCCCTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179005.3 |
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| CDS-3UTR GCA 90 bp | GCAGCAGGGAAGTGCTCACTCCAAAGCTACCTCCGAGGTCCAGGCAGAGGCTCTAGGAGTATCCTGCAGTaGACTCTGGAGAACCATTTT | + |
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Preference number: 4 (lower is better) Translates to: AAGKCSLQSYLRGPGRGSRSILQ*TLENHF Trigger: AAAATGGTTCTCCAGAGTGCACTGCAGGATACTCCT...AGAGCCTCTGCCTGGACCTCGGAGGTAGCTTTGGAGTGAGCACTTCCCTGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179005.3 |
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| CDS-3UTR CCA 90 bp | TGCAGCAGGGAAGTGCTCACTCCAAAGCTACCTCCGAGGTCCAGGCAGAGGCTCTGGTACTTCCAGGGATaGTTTCGTCCATTGGATTTG | + |
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Preference number: 4 (lower is better) Translates to: CSREVLTPKLPPRSRQRLWYFQG*FRPLDL Trigger: CAAATCCAATGGACGAAACCATCCCTGGAAGTACCA...GAGCCTCTGCCTGGACCTCGGAGGTAGCTTTGGAGTGAGCACTTCCCTGCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179005.3 |
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| CDS-3UTR TCA 90 bp | CAGCAGGGAAGTGCTCACTCCAAAGCTACCTCCGAGGTCCAGGCAGAGGCTCTTAGATTGCAGCACACATaGCAGTTGATGTGTGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: QQGSAHSKATSEVQAEALRLQHT*QLMCVL Trigger: CAGAACACACATCAACTGTCATGTGTGCTGCAATCT...AAGAGCCTCTGCCTGGACCTCGGAGGTAGCTTTGGAGTGAGCACTTCCCTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179005.3 |
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| CDS-3UTR GCA 90 bp | CAGCAGGGAAGTGCTCACTCCAAAGCTACCTCCGAGGTCCAGGCAGAGGCTCTTAACGTGAGAAGTTTCTaGGTGGAAGCTATGATGCGA | + |
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Preference number: 4 (lower is better) Translates to: QQGSAHSKATSEVQAEALNVRSF*VEAMMR Trigger: TCGCATCATAGCTTCCACGCAGAAACTTCTCACGTT...AAGAGCCTCTGCCTGGACCTCGGAGGTAGCTTTGGAGTGAGCACTTCCCTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179005.3 |
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| CDS-3UTR TCA 90 bp | GCAGGGAAGTGCTCACTCCAAAGCTACCTCCGAGGTCCAGGCAGAGGCTCTTCAAAAGGTAATGTTGGGTaGGGAGAACGTGAGAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: AGKCSLQSYLRGPGRGSSKGNVG*GEREKF Trigger: AAACTTCTCACGTTCTCCTCACCCAACATTACCTTT...TGAAGAGCCTCTGCCTGGACCTCGGAGGTAGCTTTGGAGTGAGCACTTCCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179005.3 |
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| CDS-3UTR GCA 90 bp | GCAGCAGGGAAGTGCTCACTCCAAAGCTACCTCCGAGGTCCAGGCAGAGGCTCTAATACCTATTCAGAATaGAGATCAACAGGGACAGGA | + |
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Preference number: 4 (lower is better) Translates to: AAGKCSLQSYLRGPGRGSNTYSE*RSTGTG Trigger: TCCTGTCCCTGTTGATCTGCATTCTGAATAGGTATT...AGAGCCTCTGCCTGGACCTCGGAGGTAGCTTTGGAGTGAGCACTTCCCTGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179005.3 |
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| CDS-3UTR CCA 90 bp | GCAGCAGGGAAGTGCTCACTCCAAAGCTACCTCCGAGGTCCAGGCAGAGGCTCTGATGATCATCAAGTTTaGGATCAGAATCTTGATGCT | + |
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Preference number: 4 (lower is better) Translates to: AAGKCSLQSYLRGPGRGSDDHQV*DQNLDA Trigger: AGCATCAAGATTCTGATCCCAAACTTGATGATCATC...AGAGCCTCTGCCTGGACCTCGGAGGTAGCTTTGGAGTGAGCACTTCCCTGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179005.3 |
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| CDS-3UTR CAA 90 bp | AGCAGGGAAGTGCTCACTCCAAAGCTACCTCCGAGGTCCAGGCAGAGGCTCTTCTTTGGGATCAGAATCTaGATGCTGGTACTTCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: SREVLTPKLPPRSRQRLFFGIRI*MLVLPG Trigger: CCCTGGAAGTACCAGCATCAAGATTCTGATCCCAAA...GAAGAGCCTCTGCCTGGACCTCGGAGGTAGCTTTGGAGTGAGCACTTCCCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179005.3 |
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| CDS-3UTR CAA 90 bp | GCAGGGAAGTGCTCACTCCAAAGCTACCTCCGAGGTCCAGGCAGAGGCTCTTCAATGAGAAAGGTAATGTaGGGTGAGGAGAACGTGAGA | + |
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Preference number: 5 (lower is better) Translates to: AGKCSLQSYLRGPGRGSSMRKVM*GEENVR Trigger: TCTCACGTTCTCCTCACCCAACATTACCTTTCTCAT...TGAAGAGCCTCTGCCTGGACCTCGGAGGTAGCTTTGGAGTGAGCACTTCCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179005.3 |
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| CDS-3UTR CAA 90 bp | GCAGGGAAGTGCTCACTCCAAAGCTACCTCCGAGGTCCAGGCAGAGGCTCTTCAGCTCTGCTTTGCTTCTaGACATCTCCACCATGTTTT | + |
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Preference number: 5 (lower is better) Translates to: AGKCSLQSYLRGPGRGSSALLCF*TSPPCF Trigger: AAAACATGGTGGAGATGTCAAGAAGCAAAGCAGAGC...TGAAGAGCCTCTGCCTGGACCTCGGAGGTAGCTTTGGAGTGAGCACTTCCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179005.3 |
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| CDS TCA 90 bp | TGCTGGTACTTCCAGGGATGGTTTCGTCCATTGGATTTGTTGTTGTaGGTGCCATTGTGGAGGCTGAGATGTTTAGGGCCAGAAACCCTG | + |
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Preference number: 5 (lower is better) Translates to: CWYFQGWFRPLDLLL*VPLWRLRCLGPETL Trigger: CAGGGTTTCTGGCCCTAAACATCTCAGCCTCCACAATGGCACTCACAACAACAAATCCAATGGACGAAACCATCCCTGGAAGTACCAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098436.4 ENSMUST00000179005.3 |
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| CDS CCA 90 bp | TCCACCATGTTTTCAGCTGTCTCAGGAGTATCCTGCAGTGCACTCTaGAGAACCATTTTGAGGGTCTGGTGCTTCAACCGATGCCTGAAT | + |
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Preference number: 5 (lower is better) Translates to: STMFSAVSGVSCSAL*RTILRVWCFNRCLN Trigger: ATTCAGGCATCGGTTGAAGCACCAGACCCTCAAAATGGTTCTCCAGAGTGCACTGCAGGATACTCCTGAGACAGCTGAAAACATGGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098436.4 ENSMUST00000179005.3 |
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| CDS GCA 90 bp | CAAATGAGAAAGGTAATGTTGGGTGAGGAGAACGTGAGAAGTTTCTaGGTGGAAGCTATGATGCGACAGAGGAGGAAGAGGAAGTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: QMRKVMLGEENVRSF*VEAMMRQRRKRKSA Trigger: GGCTGACTTCCTCTTCCTCCTCTGTCGCATCATAGCTTCCACGCAGAAACTTCTCACGTTCTCCTCACCCAACATTACCTTTCTCATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098436.4 ENSMUST00000179005.3 |
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| CDS GCA 72 bp | AAGGTAATGTTGGGTGAGGAGAACGTGAGAAGTTTCTaGGTGGAAGCTATGATGCGACAGAGGAGGAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: KVMLGEENVRSF*VEAMMRQRRKR Trigger: CCTCTTCCTCCTCTGTCGCATCATAGCTTCCACGCAGAAACTTCTCACGTTCTCCTCACCCAACATTACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098436.4 ENSMUST00000179005.3 |
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| CDS CCA 72 bp | TTTTCAGCTGTCTCAGGAGTATCCTGCAGTGCACTCTaGAGAACCATTTTGAGGGTCTGGTGCTTCAACCGA | + |
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Preference number: 6 (lower is better) Translates to: FSAVSGVSCSAL*RTILRVWCFNR Trigger: TCGGTTGAAGCACCAGACCCTCAAAATGGTTCTCCAGAGTGCACTGCAGGATACTCCTGAGACAGCTGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098436.4 ENSMUST00000179005.3 |
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| CDS GCA 72 bp | TGGTATCTAAGAAACCGCAGAAATACCTATTCAGAATaGAGATCAACAGGGACAGGACCCAGATTGCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: WYLRNRRNTYSE*RSTGTGPRLQH Trigger: GTGCTGCAATCTGGGTCCTGTCCCTGTTGATCTGCATTCTGAATAGGTATTTCTGCGGTTTCTTAGATACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098436.4 ENSMUST00000179005.3 |
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| CDS CAA 90 bp | CCGACCAGTCCAAAGATGATGATCATCAAGTTTGGGATCAGAATCTaGATGCTGGTACTTCCAGGGATGGTTTCGTCCATTGGATTTGTT | + |
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Preference number: 6 (lower is better) Translates to: PTSPKMMIIKFGIRI*MLVLPGMVSSIGFV Trigger: AACAAATCCAATGGACGAAACCATCCCTGGAAGTACCAGCATCAAGATTCTGATCCCAAACTTGATGATCATCATCTTTGGACTGGTCGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098436.4 ENSMUST00000179005.3 |
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| CDS CAA 72 bp | CCAAAGATGATGATCATCAAGTTTGGGATCAGAATCTaGATGCTGGTACTTCCAGGGATGGTTTCGTCCATT | + |
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Preference number: 6 (lower is better) Translates to: PKMMIIKFGIRI*MLVLPGMVSSI Trigger: AATGGACGAAACCATCCCTGGAAGTACCAGCATCAAGATTCTGATCCCAAACTTGATGATCATCATCTTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098436.4 ENSMUST00000179005.3 |
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