Pregenerated sensors for MRGPRA4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067173Ensembl transcript IDs: ENSMUST00000087092.4
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GTGCAGCAGGGCAGTGCTCAATCCAAAGCCACCTCTGAGGTCCAGGTAGAGGCTAGCACACAGGACAGTTaGTGTGTGTTCTGGGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: VQQGSAQSKATSEVQVEASTQDS*CVFWAA Trigger: CGCCGCCCAGAACACACATCAACTGTCCTGTGTGCT...AGCCTCTACCTGGACCTCAGAGGTGGCTTTGGATTGAGCACTGCCCTGCTGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087092.4 |
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| CDS-3UTR CCA 90 bp | GTGCAGCAGGGCAGTGCTCAATCCAAAGCCACCTCTGAGGTCCAGGTAGAGGCTTCCTGCAATGCACTCTaGAGAACCATTTTGAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: VQQGSAQSKATSEVQVEASCNAL*RTILRV Trigger: GACCCTCAAAATGGTTCTCCAGAGTGCATTGCAGGA...AGCCTCTACCTGGACCTCAGAGGTGGCTTTGGATTGAGCACTGCCCTGCTGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087092.4 |
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| CDS-3UTR TCA 90 bp | CAGCAGGGCAGTGCTCAATCCAAAGCCACCTCTGAGGTCCAGGTAGAGGCTCTTGGAGCCAAAACAAAATaGCATTTCCTGTCAGCCCGA | + |
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Preference number: 4 (lower is better) Translates to: QQGSAQSKATSEVQVEALGAKTK*HFLSAR Trigger: TCGGGCTGACAGGAAATGTCATTTTGTTTTGGCTCC...AAGAGCCTCTACCTGGACCTCAGAGGTGGCTTTGGATTGAGCACTGCCCTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087092.4 |
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| CDS-3UTR TCA 90 bp | GTGCAGCAGGGCAGTGCTCAATCCAAAGCCACCTCTGAGGTCCAGGTAGAGGCTCTCTGCTTTGCTTCTTaGCATCTCCACCATGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: VQQGSAQSKATSEVQVEALCFAS*HLHHVF Trigger: GAAAACATGGTGGAGATGTCAAGAAGCAAAGCAGAG...AGCCTCTACCTGGACCTCAGAGGTGGCTTTGGATTGAGCACTGCCCTGCTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087092.4 |
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| CDS-3UTR GCA 90 bp | GTGCAGCAGGGCAGTGCTCAATCCAAAGCCACCTCTGAGGTCCAGGTAGAGGCTATTTTGAGGGTCTTGTaGTTCAACCGATGCCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: VQQGSAQSKATSEVQVEAILRVL*FNRCLK Trigger: CTTCAGGCATCGGTTGAAGCACAAGACCCTCAAAAT...AGCCTCTACCTGGACCTCAGAGGTGGCTTTGGATTGAGCACTGCCCTGCTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087092.4 |
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| CDS-3UTR GCA 90 bp | GTGCAGCAGGGCAGTGCTCAATCCAAAGCCACCTCTGAGGTCCAGGTAGAGGCTAGGAGTGTCCTGCAATaGACTCTGGAGAACCATTTT | + |
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Preference number: 4 (lower is better) Translates to: VQQGSAQSKATSEVQVEARSVLQ*TLENHF Trigger: AAAATGGTTCTCCAGAGTGCATTGCAGGACACTCCT...AGCCTCTACCTGGACCTCAGAGGTGGCTTTGGATTGAGCACTGCCCTGCTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087092.4 |
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| CDS-3UTR GCA 90 bp | GTGCAGCAGGGCAGTGCTCAATCCAAAGCCACCTCTGAGGTCCAGGTAGAGGCTAATATCCATTCAGAATaGAGATCAACAGGGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VQQGSAQSKATSEVQVEANIHSE*RSTGAG Trigger: TCCTGCCCCTGTTGATCTGCATTCTGAATGGATATT...AGCCTCTACCTGGACCTCAGAGGTGGCTTTGGATTGAGCACTGCCCTGCTGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087092.4 |
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| CDS-3UTR CCA 90 bp | CAGCAGGGCAGTGCTCAATCCAAAGCCACCTCTGAGGTCCAGGTAGAGGCTCTTGATGGTTTCGTTCATTaGATTTGTTGTTGTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QQGSAQSKATSEVQVEALDGFVH*ICCCGC Trigger: GCACCCACAACAACAAATCCAATGAACGAAACCATC...AAGAGCCTCTACCTGGACCTCAGAGGTGGCTTTGGATTGAGCACTGCCCTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087092.4 |
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| CDS-3UTR TCA 90 bp | CAGCAGGGCAGTGCTCAATCCAAAGCCACCTCTGAGGTCCAGGTAGAGGCTCTTGCATTGTGGAATTTATaGTGTGACAGAGAAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: QQGSAQSKATSEVQVEALALWNL*CDREGR Trigger: TCTTCCTTCTCTGTCACATCATAAATTCCACAATGC...AAGAGCCTCTACCTGGACCTCAGAGGTGGCTTTGGATTGAGCACTGCCCTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087092.4 |
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| CDS-3UTR TCA 90 bp | CAGCAGGGCAGTGCTCAATCCAAAGCCACCTCTGAGGTCCAGGTAGAGGCTCTTATATTGTTGGGTAGGTaGACCTTGAGAAGAAGCATT | + |
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Preference number: 4 (lower is better) Translates to: QQGSAQSKATSEVQVEALILLGR*TLRRSI Trigger: AATGCTTCTTCTCAAGGTTCACCTACCCAACAATAT...AAGAGCCTCTACCTGGACCTCAGAGGTGGCTTTGGATTGAGCACTGCCCTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087092.4 |
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| CDS-3UTR TCA 90 bp | CAGCAGGGCAGTGCTCAATCCAAAGCCACCTCTGAGGTCCAGGTAGAGGCTCTTTTGGGACCAAAGAAATaGCAGAAATATCCATTCAGA | + |
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Preference number: 4 (lower is better) Translates to: QQGSAQSKATSEVQVEALLGPKK*QKYPFR Trigger: TCTGAATGGATATTTCTGTCATTTCTTTGGTCCCAA...AAGAGCCTCTACCTGGACCTCAGAGGTGGCTTTGGATTGAGCACTGCCCTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087092.4 |
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| CDS-3UTR CAA 90 bp | GTGCAGCAGGGCAGTGCTCAATCCAAAGCCACCTCTGAGGTCCAGGTAGAGGCTGGATGGTTTCGTTCATaGGATTTGTTGTTGTGGGTG | + |
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Preference number: 5 (lower is better) Translates to: VQQGSAQSKATSEVQVEAGWFRS*DLLLWV Trigger: CACCCACAACAACAAATCCAATGAACGAAACCATCC...AGCCTCTACCTGGACCTCAGAGGTGGCTTTGGATTGAGCACTGCCCTGCTGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087092.4 |
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| CDS TCA 90 bp | GTTGCCAGACACACAGAGTCAATTACATATTTGGGACCAAAGAAATaGCAGAAATATCCATTCAGAATGCAGATCAACAGGGGCAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: VARHTESITYLGPKK*QKYPFRMQINRGRN Trigger: GTTCCTGCCCCTGTTGATCTGCATTCTGAATGGATATTTCTGTCATTTCTTTGGTCCCAAATATGTAATTGACTCTGTGTGTCTGGCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087092.4 |
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| CDS CCA 72 bp | TTGGGATCAGGGTCTCGATGTCAATACTTCCAGGGATaGTTTCGTTCATTGGATTTGTTGTTGTGGGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: LGSGSRCQYFQG*FRSLDLLLWVP Trigger: TGGCACCCACAACAACAAATCCAATGAACGAAACCATCCCTGGAAGTATTGACATCGAGACCCTGATCCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087092.4 |
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| CDS GCA 72 bp | CAAAAACATCGGGTATGTTCTGATAAAGAAGTTCGTTaGCAGACACACAGAGTCAATTACATATTTGGGACC | + |
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Preference number: 6 (lower is better) Translates to: QKHRVCSDKEVR*QTHRVNYIFGT Trigger: GGTCCCAAATATGTAATTGACTCTGTGTGTCTGGCAACGAACTTCTTTATCAGAACATACCCGATGTTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087092.4 |
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| CDS TCA 72 bp | ATGTCAAAGCAATGGTTCAAAATATTGTTGGGTAGGTaGACCTTGAGAAGAAGCATTGTGGAATTTATGATG | + |
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Preference number: 6 (lower is better) Translates to: MSKQWFKILLGR*TLRRSIVEFMM Trigger: CATCATAAATTCCACAATGCTTCTTCTCAAGGTTCACCTACCCAACAATATTTTGAACCATTGCTTTGACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087092.4 |
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