Pregenerated sensors for MRGPRA2A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000093973

Ensembl transcript IDs: ENSMUST00000159004.2

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR TCA 90 bp	TGGTGGACCACTGAGGCATGTCAAATCAGTAAGCTGAGAGAAGAGTGGACAGTGCTCCAAAGCCACCTCTaGGATCCAGGTAGAGGCTCT	+
Preference number: 2 (lower is better) Translates to: WWTTEACQISKLREEWTVLQSHL*DPGRGS Trigger: AGAGCCTCTACCTGGATCTCAGAGGTGGCTTTGGAG...CACTGTCCACTCTTCTCTCAGCTTACTGATTTGACATGCCTCAGTGGTCCACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159004.2
CDS-3UTR TCA 90 bp	ACCACTGAGGCATGTCAAATCAGTAAGCTGAGAGAAGAGTGGACAGTGGTCAAGGCTTCAACCGATGTCTaGAAGAGCCCACGAAGAAGT	+
Preference number: 4 (lower is better) Translates to: TTEACQISKLREEWTVVKASTDV*KSPRRS Trigger: ACTTCTTCGTGGGCTCTTTCAGACATCGGTTGAAGC...CTTGACCACTGTCCACTCTTCTCTCAGCTTACTGATTTGACATGCCTCAGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159004.2
CDS TCA 90 bp	TCAGAATGCAGATCAACAGGGATAGGACCCAGATCACAGCACACATaGCAGTTGATGTATGTACTGGACGGTGGCAGCGATACCAGGTGG	+
Preference number: 5 (lower is better) Translates to: SECRSTGIGPRSQHT*QLMYVLDGGSDTRW Trigger: CCACCTGGTATCGCTGCCACCGTCCAGTACATACATCAACTGTCATGTGTGCTGTGATCTGGGTCCTATCCCTGTTGATCTGCATTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159004.2
CDS-3UTR CAA 90 bp	TGGTGGACCACTGAGGCATGTCAAATCAGTAAGCTGAGAGAAGAGTGGACAGTGGGAGGGTTTCGTCCATaGGATTTGTTGTCACTGGTG	+
Preference number: 5 (lower is better) Translates to: WWTTEACQISKLREEWTVGGFRP*DLLSLV Trigger: CACCAGTGACAACAAATCCAATGGACGAAACCCTCC...CACTGTCCACTCTTCTCTCAGCTTACTGATTTGACATGCCTCAGTGGTCCACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159004.2
CDS-3UTR CAA 90 bp	TGGTGGACCACTGAGGCATGTCAAATCAGTAAGCTGAGAGAAGAGTGGACAGTGGCTCTGCTTTGTTACTaGACATCTCTACCATGTTTT	+
Preference number: 5 (lower is better) Translates to: WWTTEACQISKLREEWTVALLCY*TSLPCF Trigger: AAAACATGGTAGAGATGTCAAGTAACAAAGCAGAGC...CACTGTCCACTCTTCTCTCAGCTTACTGATTTGACATGCCTCAGTGGTCCACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159004.2
CDS CCA 72 bp	CAGCGCCACAGAACAACCTGGCCAGCAGAGCCAGGCTaGACAGACAGAGGACCACAAGCAAAAATATCATGT	+
Preference number: 6 (lower is better) Translates to: QRHRTTWPAEPG*TDRGPQAKISC Trigger: ACATGATATTTTTGCTTGTGGTCCTCTGTCTGTCCAGCCTGGCTCTGCTGGCCAGGTTGTTCTGTGGCGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159004.2
CDS TCA 72 bp	AGGAGAAAAACCAAAAGGGTCAGCAAGATGGTCACATaGAATCTGGTAAGCTTCATCTGCCCAGCGCCACAG	+
Preference number: 6 (lower is better) Translates to: RRKTKRVSKMVT*NLVSFICPAPQ Trigger: CTGTGGCGCTGGGCAGATGAAGCTTACCAGATTTCATGTGACCATCTTGCTGACCCTTTTGGTTTTTCTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159004.2
CDS CCA 72 bp	CAGTCCGACCAGTCCGAAGATGATGATCATCAATTTTaGGATCAGAATCCTAATGTTGATACTTCCAGGGAG	+
Preference number: 6 (lower is better) Translates to: QSDQSEDDDHQF*DQNPNVDTSRE Trigger: CTCCCTGGAAGTATCAACATTAGGATTCTGATCCCAAAATTGATGATCATCATCTTCGGACTGGTCGGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159004.2
CDS CAA 90 bp	AGTCCGAAGATGATGATCATCAATTTTGGGATCAGAATCCTAATGTaGATACTTCCAGGGAGGGTTTCGTCCATTGGATTTGTTGTCACT	+
Preference number: 6 (lower is better) Translates to: SPKMMIINFGIRILM*ILPGRVSSIGFVVT Trigger: AGTGACAACAAATCCAATGGACGAAACCCTCCCTGGAAGTATCAACATTAGGATTCTGATCCCAAAATTGATGATCATCATCTTCGGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159004.2