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Pregenerated sensors for MRGPRA1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000050650

Ensembl transcript IDs: ENSMUST00000098438.4

Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp GTGCAGCAGGGCAATGCTCACCCCAAAGCCACCTCTAAGGGCCAGGCAAAGGCTCCACCAGAGCCAGGCTaGACAGACAGAGGACCACAA +
Preference number: 4 (lower is better)
Translates to: VQQGNAHPKATSKGQAKAPPEPG*TDRGPQ
Trigger: TTGTGGTCCTCTGTCTGTCCAGCCTGGCTCTGGTGG...AGCCTTTGCCTGGCCCTTAGAGGTGGCTTTGGGGTGAGCATTGCCCTGCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098438.4
CDS-3UTR CCA 90 bp TGCAGCAGGGCAATGCTCACCCCAAAGCCACCTCTAAGGGCCAGGCAAAGGCTCTACCACAGAACAACCTaGCCACCAGAGCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: CSRAMLTPKPPLRARQRLYHRTT*PPEPGW
Trigger: CCAGCCTGGCTCTGGTGGCCAGGTTGTTCTGTGGTA...GAGCCTTTGCCTGGCCCTTAGAGGTGGCTTTGGGGTGAGCATTGCCCTGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098438.4
CDS-3UTR GCA 90 bp TGCAGCAGGGCAATGCTCACCCCAAAGCCACCTCTAAGGGCCAGGCAAAGGCTCGTCTCAGGAGTGTCTTaGAGTGCATTCTGGAGAACC +
Preference number: 4 (lower is better)
Translates to: CSRAMLTPKPPLRARQRLVSGVS*SAFWRT
Trigger: GGTTCTCCAGAATGCACTGCAAGACACTCCTGAGAC...GAGCCTTTGCCTGGCCCTTAGAGGTGGCTTTGGGGTGAGCATTGCCCTGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098438.4
CDS-3UTR CCA 90 bp CAGCAGGGCAATGCTCACCCCAAAGCCACCTCTAAGGGCCAGGCAAAGGCTCTTGACAGTGATACCAGATaGGGCACAGTACAGACAGGC +
Preference number: 4 (lower is better)
Translates to: QQGNAHPKATSKGQAKALDSDTR*GTVQTG
Trigger: GCCTGTCTGTACTGTGCCCCATCTGGTATCACTGTC...AAGAGCCTTTGCCTGGCCCTTAGAGGTGGCTTTGGGGTGAGCATTGCCCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098438.4
CDS-3UTR CCA 90 bp GTGCAGCAGGGCAATGCTCACCCCAAAGCCACCTCTAAGGGCCAGGCAAAGGCTAATAACAGAAACCAGTaGATGCCAAAGGGCAATCCG +
Preference number: 4 (lower is better)
Translates to: VQQGNAHPKATSKGQAKANNRNQ*MPKGNP
Trigger: CGGATTGCCCTTTGGCATCCACTGGTTTCTGTTATT...AGCCTTTGCCTGGCCCTTAGAGGTGGCTTTGGGGTGAGCATTGCCCTGCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098438.4
CDS-3UTR CCA 90 bp GTGCAGCAGGGCAATGCTCACCCCAAAGCCACCTCTAAGGGCCAGGCAAAGGCTTCTTGCAGTGCATTCTaGAGAACCATTTTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: VQQGNAHPKATSKGQAKASCSAF*RTILRV
Trigger: GACCCTCAAAATGGTTCTCCAGAATGCACTGCAAGA...AGCCTTTGCCTGGCCCTTAGAGGTGGCTTTGGGGTGAGCATTGCCCTGCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098438.4
CDS-3UTR TCA 90 bp GTGCAGCAGGGCAATGCTCACCCCAAAGCCACCTCTAAGGGCCAGGCAAAGGCTATGGAATCTATGATGTaGCCTAGGAGGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: VQQGNAHPKATSKGQAKAMESMM*PRRKKK
Trigger: CTTCTTCTTCCTCCTAGGTCACATCATAGATTCCAT...AGCCTTTGCCTGGCCCTTAGAGGTGGCTTTGGGGTGAGCATTGCCCTGCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098438.4
CDS-3UTR TCA 90 bp CAGCAGGGCAATGCTCACCCCAAAGCCACCTCTAAGGGCCAGGCAAAGGCTCTTGCAGTATGGAATCTATaGTGTGACCTAGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: QQGNAHPKATSKGQAKALAVWNL*CDLGGR
Trigger: TCTTCCTCCTAGGTCACATCATAGATTCCATACTGC...AAGAGCCTTTGCCTGGCCCTTAGAGGTGGCTTTGGGGTGAGCATTGCCCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098438.4
CDS-3UTR GCA 90 bp GTGCAGCAGGGCAATGCTCACCCCAAAGCCACCTCTAAGGGCCAGGCAAAGGCTAGGAGTGTCTTGCAGTaGATTCTGGAGAACCATTTT +
Preference number: 4 (lower is better)
Translates to: VQQGNAHPKATSKGQAKARSVLQ*ILENHF
Trigger: AAAATGGTTCTCCAGAATGCACTGCAAGACACTCCT...AGCCTTTGCCTGGCCCTTAGAGGTGGCTTTGGGGTGAGCATTGCCCTGCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098438.4
CDS-3UTR TCA 90 bp GTGCAGCAGGGCAATGCTCACCCCAAAGCCACCTCTAAGGGCCAGGCAAAGGCTTTGGGTAGAAAACATTaGGAAGAAGCAGTATGGAAT +
Preference number: 4 (lower is better)
Translates to: VQQGNAHPKATSKGQAKALGRKH*EEAVWN
Trigger: ATTCCATACTGCTTCTTCTCAATGTTTTCTACCCAA...AGCCTTTGCCTGGCCCTTAGAGGTGGCTTTGGGGTGAGCATTGCCCTGCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098438.4
CDS-3UTR GCA 90 bp CAGCAGGGCAATGCTCACCCCAAAGCCACCTCTAAGGGCCAGGCAAAGGCTCTTCAAAAACATCAGGTATaGAGCAGTAAAGAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: QQGNAHPKATSKGQAKALQKHQV*SSKEAQ
Trigger: TTGAGCTTCTTTACTGCTGCATACCTGATGTTTTTG...AAGAGCCTTTGCCTGGCCCTTAGAGGTGGCTTTGGGGTGAGCATTGCCCTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098438.4
CDS-3UTR CAA 90 bp CAGCAGGGCAATGCTCACCCCAAAGCCACCTCTAAGGGCCAGGCAAAGGCTCTTATCTCCACCATGATTTaGGCTGTCTCAGGAGTGTCT +
Preference number: 5 (lower is better)
Translates to: QQGNAHPKATSKGQAKALISTMI*AVSGVS
Trigger: AGACACTCCTGAGACAGCCAAAATCATGGTGGAGAT...AAGAGCCTTTGCCTGGCCCTTAGAGGTGGCTTTGGGGTGAGCATTGCCCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098438.4
CDS CCA 90 bp TTATCTGCCCAGTACCACAGAACAACCTGGCCACCAGAGCCAGGCTaGACAGACAGAGGACCACAAACAAAAACATCAGGTATGCAGCAG +
Preference number: 5 (lower is better)
Translates to: LSAQYHRTTWPPEPG*TDRGPQTKTSGMQQ
Trigger: CTGCTGCATACCTGATGTTTTTGTTTGTGGTCCTCTGTCTGTCCAGCCTGGCTCTGGTGGCCAGGTTGTTCTGTGGTACTGGGCAGATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098438.4
CDS CCA 90 bp TCCACCATGATTTTGGCTGTCTCAGGAGTGTCTTGCAGTGCATTCTaGAGAACCATTTTGAGGGTCTGGTGCTTCAACCGATGCCTGAAG +
Preference number: 5 (lower is better)
Translates to: STMILAVSGVSCSAF*RTILRVWCFNRCLK
Trigger: CTTCAGGCATCGGTTGAAGCACCAGACCCTCAAAATGGTTCTCCAGAATGCACTGCAAGACACTCCTGAGACAGCCAAAATCATGGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098438.4
CDS CCA 90 bp ATTTCCTGTCAGCCCGACCAGTCCGAAGATGATGATCATCAAGTTTaGGATCAGAATCGTGATGTTGATACCTCCAGGGATGGTATTGTC +
Preference number: 5 (lower is better)
Translates to: ISCQPDQSEDDDHQV*DQNRDVDTSRDGIV
Trigger: GACAATACCATCCCTGGAGGTATCAACATCACGATTCTGATCCCAAACTTGATGATCATCATCTTCGGACTGGTCGGGCTGACAGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098438.4
CDS CCA 90 bp ATAGAGAACCATCATGATCGTGTAAAAGCACAAGAGAAAGGTAATTaGGTAGAAAACATTGAGAAGAAGCAGTATGGAATCTATGATGTG +
Preference number: 5 (lower is better)
Translates to: IENHHDRVKAQEKGN*VENIEKKQYGIYDV
Trigger: CACATCATAGATTCCATACTGCTTCTTCTCAATGTTTTCTACCCAATTACCTTTCTCTTGTGCTTTTACACGATCATGATGGTTCTCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098438.4
CDS CCA 72 bp CAGTACCACAGAACAACCTGGCCACCAGAGCCAGGCTaGACAGACAGAGGACCACAAACAAAAACATCAGGT +
Preference number: 6 (lower is better)
Translates to: QYHRTTWPPEPG*TDRGPQTKTSG
Trigger: ACCTGATGTTTTTGTTTGTGGTCCTCTGTCTGTCCAGCCTGGCTCTGGTGGCCAGGTTGTTCTGTGGTACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098438.4
CDS CCA 72 bp ATTTTGGCTGTCTCAGGAGTGTCTTGCAGTGCATTCTaGAGAACCATTTTGAGGGTCTGGTGCTTCAACCGA +
Preference number: 6 (lower is better)
Translates to: ILAVSGVSCSAF*RTILRVWCFNR
Trigger: TCGGTTGAAGCACCAGACCCTCAAAATGGTTCTCCAGAATGCACTGCAAGACACTCCTGAGACAGCCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098438.4
CDS CAA 72 bp GGCTCTGATTTGCTTCTTGACATCTCCACCATGATTTaGGCTGTCTCAGGAGTGTCTTGCAGTGCATTCTGG +
Preference number: 6 (lower is better)
Translates to: GSDLLLDISTMI*AVSGVSCSAFW
Trigger: CCAGAATGCACTGCAAGACACTCCTGAGACAGCCAAAATCATGGTGGAGATGTCAAGAAGCAAATCAGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098438.4
CDS GCA 72 bp GGACAGACAGAGGACCACAAACAAAAACATCAGGTATaGAGCAGTAAAGAAGCTCAATGCCAGACACCCATT +
Preference number: 6 (lower is better)
Translates to: GQTEDHKQKHQV*SSKEAQCQTPI
Trigger: AATGGGTGTCTGGCATTGAGCTTCTTTACTGCTGCATACCTGATGTTTTTGTTTGTGGTCCTCTGTCTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098438.4
CDS GCA 72 bp AGAATAATGGTTACATACAATCTGGTAAGCTTTATCTaGCCAGTACCACAGAACAACCTGGCCACCAGAGCC +
Preference number: 6 (lower is better)
Translates to: RIMVTYNLVSFI*PVPQNNLATRA
Trigger: GGCTCTGGTGGCCAGGTTGTTCTGTGGTACTGGGCAGATAAAGCTTACCAGATTGTATGTAACCATTATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098438.4
CDS CAA 90 bp AGTCCGAAGATGATGATCATCAAGTTTGGGATCAGAATCGTGATGTaGATACCTCCAGGGATGGTATTGTCCATTGGATTAGTTGTTGTG +
Preference number: 6 (lower is better)
Translates to: SPKMMIIKFGIRIVM*IPPGMVLSIGLVVV
Trigger: CACAACAACTAATCCAATGGACAATACCATCCCTGGAGGTATCAACATCACGATTCTGATCCCAAACTTGATGATCATCATCTTCGGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098438.4
CDS TCA 72 bp AAAACATTGAGAAGAAGCAGTATGGAATCTATGATGTaGCCTAGGAGGAAGAAGAAGTCAGCTAGAGCTAAG +
Preference number: 6 (lower is better)
Translates to: KTLRRSSMESMM*PRRKKKSARAK
Trigger: CTTAGCTCTAGCTGACTTCTTCTTCCTCCTAGGTCACATCATAGATTCCATACTGCTTCTTCTCAATGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098438.4
CDS CAA 72 bp ATGATGATCATCAAGTTTGGGATCAGAATCGTGATGTaGATACCTCCAGGGATGGTATTGTCCATTGGATTA +
Preference number: 6 (lower is better)
Translates to: MMIIKFGIRIVM*IPPGMVLSIGL
Trigger: TAATCCAATGGACAATACCATCCCTGGAGGTATCAACATCACGATTCTGATCCCAAACTTGATGATCATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098438.4