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Pregenerated sensors for MRFAP1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000055302

Ensembl transcript IDs: ENSMUST00000068795.4

Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGTCTTCGAGAATTAACACAGCTCCTTCAGAACTTTCAGAGGCGGTaGGCTTCAACTCTGAGTCTCAAGTGTCACAGAGATTCAAAGTTC +
Preference number: 1 (lower is better)
Translates to: SLRELTQLLQNFQRR*ASTLSLKCHRDSKF
Trigger: GAACTTTGAATCTCTGTGACACTTGAGACTCAGAGTTGAAGCTCACCGCCTCTGAAAGTTCTGAAGGAGCTGTGTTAATTCTCGAAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068795.4
3UTR CCA 90 bp ATTGCAAGGATCTTTCATTTTATGGCCAGGATCTCCTCGAATATATaGGGATACCAACTTGTACAGACTAACAAGACCTCTTCTCCCATC +
Preference number: 1 (lower is better)
Translates to: IARIFHFMARISSNI*GYQLVQTNKTSSPI
Trigger: GATGGGAGAAGAGGTCTTGTTAGTCTGTACAAGTTGGTATCCCCATATATTCGAGGAGATCCTGGCCATAAAATGAAAGATCCTTGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068795.4
3UTR-3UTR CCA 90 bp AGGGTATTGCAAGGATCTTTCATTTTATGGCCAGGATCTCCTCGAATATATGGGTCAACCAGAATCCATTaGCTGGAAACCGCGGCCGGC +
Preference number: 2 (lower is better)
Translates to: RVLQGSFILWPGSPRIYGSTRIH*LETAAG
Trigger: GCCGGCCGCGGTTTCCAGCCAATGGATTCTGGTTGA...CCCATATATTCGAGGAGATCCTGGCCATAAAATGAAAGATCCTTGCAATACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068795.4
3UTR-3UTR TCA 90 bp CTCTTCTGCCATTGCTGCATGGAGTCTTCGAGAATTAACACAGCTCCTTCAGAAGGTGAGCTTCAACTCTaGGTCTCAAGTGTCACAGAG +
Preference number: 2 (lower is better)
Translates to: LFCHCCMESSRINTAPSEGELQL*VSSVTE
Trigger: CTCTGTGACACTTGAGACTCAGAGTTGAAGCTCACC...TTCTGAAGGAGCTGTGTTAATTCTCGAAGACTCCATGCAGCAATGGCAGAAGAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068795.4
3UTR-3UTR TCA 90 bp TCTCCTCGAATATATGGGGATACCAACTTGTACAGACTAACAAGACCTCTTCTCAACTTTCAGAGGCGGTaGGCTTCAACTCTGAGTCTC +
Preference number: 2 (lower is better)
Translates to: SPRIYGDTNLYRLTRPLLNFQRR*ASTLSL
Trigger: GAGACTCAGAGTTGAAGCTCACCGCCTCTGAAAGTT...GAGAAGAGGTCTTGTTAGTCTGTACAAGTTGGTATCCCCATATATTCGAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068795.4
3UTR-3UTR GCA 90 bp ATCTTTCATTTTATGGCCAGGATCTCCTCGAATATATGGGGATACCAACTTGTAAAGTCTGGTCTCTTCTaGCATTGCTGCATGGAGTCT +
Preference number: 2 (lower is better)
Translates to: IFHFMARISSNIWGYQLVKSGLF*HCCMES
Trigger: AGACTCCATGCAGCAATGGCAGAAGAGACCAGACTT...TACAAGTTGGTATCCCCATATATTCGAGGAGATCCTGGCCATAAAATGAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068795.4
3UTR-3UTR GCA 90 bp ATCTTTCATTTTATGGCCAGGATCTCCTCGAATATATGGGGATACCAACTTGTACTCTTCTGCCATTGCTaGATGGAGTCTTCGAGAATT +
Preference number: 2 (lower is better)
Translates to: IFHFMARISSNIWGYQLVLFCHC*MESSRI
Trigger: AATTCTCGAAGACTCCATGCAGCAATGGCAGAAGAG...TACAAGTTGGTATCCCCATATATTCGAGGAGATCCTGGCCATAAAATGAAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068795.4
3UTR GCA 72 bp CCACTGTCCCGGATGAAGTCTGGTCTCTTCTGCCATTaGTGCATGGAGTCTTCGAGAATTAACACAGCTCCT +
Preference number: 3 (lower is better)
Translates to: PLSRMKSGLFCH*CMESSRINTAP
Trigger: AGGAGCTGTGTTAATTCTCGAAGACTCCATGCAGCAATGGCAGAAGAGACCAGACTTCATCCGGGACAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068795.4
3UTR-3UTR CAA 90 bp ATCTTTCATTTTATGGCCAGGATCTCCTCGAATATATGGGGATACCAACTTGTACTCAACCAGAATCCATaGGCTGGAAACCGCGGCCGG +
Preference number: 3 (lower is better)
Translates to: IFHFMARISSNIWGYQLVLNQNP*AGNRGR
Trigger: CCGGCCGCGGTTTCCAGCCAATGGATTCTGGTTGAG...TACAAGTTGGTATCCCCATATATTCGAGGAGATCCTGGCCATAAAATGAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068795.4
3UTR TCA 72 bp TCCTTCAGAACTTTCAGAGGCGGTGAGCTTCAACTCTaGGTCTCAAGTGTCACAGAGATTCAAAGTTCAGGG +
Preference number: 3 (lower is better)
Translates to: SFRTFRGGELQL*VSSVTEIQSSG
Trigger: CCCTGAACTTTGAATCTCTGTGACACTTGAGACTCAGAGTTGAAGCTCACCGCCTCTGAAAGTTCTGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068795.4
3UTR GCA 72 bp CATTGCAGGTTTTCCTTCCTAGGCCACACAGGGTATTaGAAGGATCTTTCATTTTATGGCCAGGATCTCCTC +
Preference number: 3 (lower is better)
Translates to: HCRFSFLGHTGY*KDLSFYGQDLL
Trigger: GAGGAGATCCTGGCCATAAAATGAAAGATCCTTGCAATACCCTGTGTGGCCTAGGAAGGAAAACCTGCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068795.4
3UTR CCA 72 bp AGGCCACACAGGGTATTGCAAGGATCTTTCATTTTATaGCCAGGATCTCCTCGAATATATGGGGATACCAAC +
Preference number: 3 (lower is better)
Translates to: RPHRVLQGSFIL*PGSPRIYGDTN
Trigger: GTTGGTATCCCCATATATTCGAGGAGATCCTGGCCATAAAATGAAAGATCCTTGCAATACCCTGTGTGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068795.4
3UTR TCA 72 bp CCTCAAAATTTAGGAACAACAACCAAAGGCCAGGAATaGACGTTATTCAACTGCCACAGGGCTTACAATCTA +
Preference number: 3 (lower is better)
Translates to: PQNLGTTTKGQE*TLFNCHRAYNL
Trigger: TAGATTGTAAGCCCTGTGGCAGTTGAATAACGTTCATTCCTGGCCTTTGGTTGTTGTTCCTAAATTTTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068795.4
CDS-3UTR GCA 90 bp TGCATGGAGTCTTCGAGAATTAACACAGCTCCTTCAGAACTTTCAGAGGCGGTGGCGCCGCCGGCACCCTaGAGGTGGTTGAGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: CMESSRINTAPSELSEAVAPPAP*RWLRAL
Trigger: GAGCGCCCTCAACCACCTGCAGGGTGCCGGCGGCGC...CACCGCCTCTGAAAGTTCTGAAGGAGCTGTGTTAATTCTCGAAGACTCCATGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068795.4
CDS-3UTR CCA 90 bp CTCTTCTGCCATTGCTGCATGGAGTCTTCGAGAATTAACACAGCTCCTTCAGAACCGGCACCCTGCAGGTaGTTGAGGGCGCTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: LFCHCCMESSRINTAPSEPAPCR*LRALSS
Trigger: CGAGGAGAGCGCCCTCAACCACCTGCAGGGTGCCGG...TTCTGAAGGAGCTGTGTTAATTCTCGAAGACTCCATGCAGCAATGGCAGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068795.4
CDS-3UTR GCA 90 bp TCTCCTCGAATATATGGGGATACCAACTTGTACAGACTAACAAGACCTCTTCTCCCATCTCCCACAGCTTaGCCCGGTTGCGCGCCGGCG +
Preference number: 4 (lower is better)
Translates to: SPRIYGDTNLYRLTRPLLPSPTA*PGCAPA
Trigger: CGCCGGCGCGCAACCGGGGCAAGCTGTGGGAGATGG...GAGAAGAGGTCTTGTTAGTCTGTACAAGTTGGTATCCCCATATATTCGAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068795.4
3UTR CAA 72 bp CCATTGCAGGTTTTCCTTCCTAGGCCACACAGGGTATaGCAAGGATCTTTCATTTTATGGCCAGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: PLQVFLPRPHRV*QGSFILWPGSP
Trigger: AGGAGATCCTGGCCATAAAATGAAAGATCCTTGCAATACCCTGTGTGGCCTAGGAAGGAAAACCTGCAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068795.4
CDS-3UTR CAA 90 bp AGGGTATTGCAAGGATCTTTCATTTTATGGCCAGGATCTCCTCGAATATATGGGTCCATCTCCCACAGCTaGCCCCGGTTGCGCGCCGGC +
Preference number: 5 (lower is better)
Translates to: RVLQGSFILWPGSPRIYGSISHS*PRLRAG
Trigger: GCCGGCGCGCAACCGGGGCAAGCTGTGGGAGATGGA...CCCATATATTCGAGGAGATCCTGGCCATAAAATGAAAGATCCTTGCAATACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068795.4