Pregenerated sensors for MRE11A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031928Ensembl transcript IDs: ENSMUST00000034405.11, ENSMUST00000115632.10, ENSMUST00000147305.2, ENSMUST00000147676.8
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTTGTAGACCAGGCTGTCCTGGAACTCAGAAATCTGCCTGCCTCTaGCTCCCAAGTGCTGGGATTAAAGGTGCGCACCACCGTGCCCGG | + |
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Preference number: 1 (lower is better) Translates to: LCRPGCPGTQKSACL*LPSAGIKGAHHRAR Trigger: CCGGGCACGGTGGTGCGCACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCCAGGACAGCCTGGTCTACAAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR GCA 90 bp | GCCATGCATGCTCCTCAGGCATGGCGAGCTCGTGCCACTGGCTCCTaGCCAAGAGGACTCCCTGCACAGGTTAAGGCATGGCTTTTCTAT | + |
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Preference number: 1 (lower is better) Translates to: AMHAPQAWRARATGS*PRGLPAQVKAWLFY Trigger: ATAGAAAAGCCATGCCTTAACCTGTGCAGGGAGTCCTCTTGGGCAGGAGCCAGTGGCACGAGCTCGCCATGCCTGAGGAGCATGCATGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR TCA 90 bp | TTCGGTCAGTTCTGGGATCATCCACTCAGAGATGTTTACAGCAACTaGAGCCAGTGTGCTGCTGGTGGAGGAGGTCCGGCACCAACACCG | + |
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Preference number: 1 (lower is better) Translates to: FGQFWDHPLRDVYSN*SQCAAGGGGPAPTP Trigger: CGGTGTTGGTGCCGGACCTCCTCCACCAGCAGCACACTGGCTTCAGTTGCTGTAAACATCTCTGAGTGGATGATCCCAGAACTGACCGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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| 3UTR CCA 90 bp | GCTCAGTCCTGTGTCGTCCTCACACAACGCACACTTGGCAAGCTCTaGGCTGGGGCCTTGATGGAGTTAAGATTTTGGTTCCTGAGAACT | + |
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Preference number: 1 (lower is better) Translates to: AQSCVVLTQRTLGKL*AGALMELRFWFLRT Trigger: AGTTCTCAGGAACCAAAATCTTAACTCCATCAAGGCCCCAGCCCAGAGCTTGCCAAGTGTGCGTTGTGTGAGGACGACACAGGACTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR CCA 90 bp | GGACAAGAGAGCTCAGTCCTGTGTCGTCCTCACACAACGCACACTTaGCAAGCTCTGGGCTGGGGCCTTGATGGAGTTAAGATTTTGGTT | + |
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Preference number: 1 (lower is better) Translates to: GQESSVLCRPHTTHT*QALGWGLDGVKILV Trigger: AACCAAAATCTTAACTCCATCAAGGCCCCAGCCCAGAGCTTGCCAAGTGTGCGTTGTGTGAGGACGACACAGGACTGAGCTCTCTTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR CCA 90 bp | CACTTGGTGATTGGTGGTACCGTCAGGTGCTGGGCTTCAAAAACTTaGCAAGTTCCAGACAGGCACTGTTTAGCCCAAGCACTGGTGTCT | + |
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Preference number: 1 (lower is better) Translates to: HLVIGGTVRCWASKT*QVPDRHCLAQALVS Trigger: AGACACCAGTGCTTGGGCTAAACAGTGCCTGTCTGGAACTTGCCAAGTTTTTGAAGCCCAGCACCTGACGGTACCACCAATCACCAAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR CCA 90 bp | TCCTTAAGAGCAAATGGGGCGCTCAAAAATCATCTGGAAGGCTGTTaGGAGTCAGGCCGAATCCTGGCCTTCTCAAGATGGCCCATGAGA | + |
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Preference number: 1 (lower is better) Translates to: SLRANGALKNHLEGC*ESGRILAFSRWPMR Trigger: TCTCATGGGCCATCTTGAGAAGGCCAGGATTCGGCCTGACTCCCAACAGCCTTCCAGATGATTTTTGAGCGCCCCATTTGCTCTTAAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR CCA 90 bp | GTCCTGTGTCGTCCTCACACAACGCACACTTGGCAAGCTCTGGGCTaGGGCCTTGATGGAGTTAAGATTTTGGTTCCTGAGAACTTATCT | + |
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Preference number: 1 (lower is better) Translates to: VLCRPHTTHTWQALG*GLDGVKILVPENLS Trigger: AGATAAGTTCTCAGGAACCAAAATCTTAACTCCATCAAGGCCCCAGCCCAGAGCTTGCCAAGTGTGCGTTGTGTGAGGACGACACAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR TCA 90 bp | AAGGGATCTCACAGGACCAGGCCTTGTGCTGTCAATGTTCCCTGCTaGCAACCCTGTGCTCACATCAGTTACAAAGCTTGTTCTAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: KGSHRTRPCAVNVPC*QPCAHISYKACSKQ Trigger: CTGCTTAGAACAAGCTTTGTAACTGATGTGAGCACAGGGTTGTCAGCAGGGAACATTGACAGCACAAGGCCTGGTCCTGTGAGATCCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR CCA 90 bp | AAAGGTCTCCATTCATCGTGGAGCTATCACATCCTTAAGAGCAAATaGGGCGCTCAAAAATCATCTGGAAGGCTGTTGGGAGTCAGGCCG | + |
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Preference number: 1 (lower is better) Translates to: KGLHSSWSYHILKSK*GAQKSSGRLLGVRP Trigger: CGGCCTGACTCCCAACAGCCTTCCAGATGATTTTTGAGCGCCCCATTTGCTCTTAAGGATGTGATAGCTCCACGATGAATGGAGACCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR GCA 90 bp | CTGACTAGATTCTCAGTCACTGCACAAGACTGTGCGGAGATTATCTaGTGTAACCGTCTAAGTGCATACAGCAGCAGAACCAGAGTGCGA | + |
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Preference number: 1 (lower is better) Translates to: LTRFSVTAQDCAEII*CNRLSAYSSRTRVR Trigger: TCGCACTCTGGTTCTGCTGCTGTATGCACTTAGACGGTTACAGCAGATAATCTCCGCACAGTCTTGTGCAGTGACTGAGAATCTAGTCAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR CCA 90 bp | TCCAAGGCCACTATGTGCTCAGTCTATGATGCCCTTGAGCTACCATaGTACCTTGTGCAACATGGCTTGATTAGCTTCCTGGGACTTCAT | + |
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Preference number: 1 (lower is better) Translates to: SKATMCSVYDALELP*YLVQHGLISFLGLH Trigger: ATGAAGTCCCAGGAAGCTAATCAAGCCATGTTGCACAAGGTACCATGGTAGCTCAAGGGCATCATAGACTGAGCACATAGTGGCCTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR GCA 90 bp | TTTCCCTCTGAAGAGACTGAATTCATCAGTTCCAAGGCCACTATGTaGTCAGTCTATGATGCCCTTGAGCTACCATGGTACCTTGTGCAA | + |
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Preference number: 1 (lower is better) Translates to: FPSEETEFISSKATM*SVYDALELPWYLVQ Trigger: TTGCACAAGGTACCATGGTAGCTCAAGGGCATCATAGACTGAGCACATAGTGGCCTTGGAACTGATGAATTCAGTCTCTTCAGAGGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR CCA 90 bp | GATGGACTCTTTGGTAAGCTAAAGGACAAAGGTCTCCATTCATCGTaGAGCTATCACATCCTTAAGAGCAAATGGGGCGCTCAAAAATCA | + |
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Preference number: 1 (lower is better) Translates to: DGLFGKLKDKGLHSS*SYHILKSKWGAQKS Trigger: TGATTTTTGAGCGCCCCATTTGCTCTTAAGGATGTGATAGCTCCACGATGAATGGAGACCTTTGTCCTTTAGCTTACCAAAGAGTCCATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR TCA 90 bp | TTCTTCCTGACAAGTATACGAGAAAGAAAAAGAGCTTGTCATTACTaGCAGAGCCATCAAGAAAATGAGTCCTGCCCAATGGGCACAGGA | + |
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Preference number: 1 (lower is better) Translates to: FFLTSIRERKRACHY*QSHQENESCPMGTG Trigger: TCCTGTGCCCATTGGGCAGGACTCATTTTCTTGATGGCTCTGTCAGTAATGACAAGCTCTTTTTCTTTCTCGTATACTTGTCAGGAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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| 3UTR CCA 90 bp | AAGAACCAATGTCAGATCTGTCTAAACAAACCCCAGAGAACTTTGTaGTACACTGATTACACAATGACCTTCAATCAACACTATTTCCCC | + |
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Preference number: 1 (lower is better) Translates to: KNQCQICLNKPQRTL*YTDYTMTFNQHYFP Trigger: GGGGAAATAGTGTTGATTGAAGGTCATTGTGTAATCAGTGTACCACAAAGTTCTCTGGGGTTTGTTTAGACAGATCTGACATTGGTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR TCA 90 bp | ATGTCAGATCTGTCTAAACAAACCCCAGAGAACTTTGTGGTACACTaGTTACACAATGACCTTCAATCAACACTATTTCCCCTTTGTACT | + |
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Preference number: 1 (lower is better) Translates to: MSDLSKQTPENFVVH*LHNDLQSTLFPLCT Trigger: AGTACAAAGGGGAAATAGTGTTGATTGAAGGTCATTGTGTAATCAGTGTACCACAAAGTTCTCTGGGGTTTGTTTAGACAGATCTGACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR CCA 90 bp | AATATAAGCCCAGACTTAAACATCTTCAGCTGTGAAGTCAGTATGTaGTGCTTTGATTTCTTCCTGCATCATGCAATTTCTAAGTTCCAT | + |
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Preference number: 1 (lower is better) Translates to: NISPDLNIFSCEVSM*CFDFFLHHAISKFH Trigger: ATGGAACTTAGAAATTGCATGATGCAGGAAGAAATCAAAGCACCACATACTGACTTCACAGCTGAAGATGTTTAAGTCTGGGCTTATATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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| 3UTR-3UTR CCA 90 bp | CAGCAACTGAAGCCAGTGTGCTGCTGGTGGAGGAGGTCCGGCACCAACACCGGCCCACACAGGAGGGCCTaGCTTTCTGGAGATCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: QQLKPVCCWWRRSGTNTGPHRRA*LSGDLG Trigger: TCCTAGATCTCCAGAAAGCCAGGCCCTCCTGTGTGG...GCCGGTGTTGGTGCCGGACCTCCTCCACCAGCAGCACACTGGCTTCAGTTGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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| 3UTR-3UTR CCA 90 bp | AGGGATCTCACAGGACCAGGCCTTGTGCTGTCAATGTTCCCTGCTGACAACCCTCCAGTGTGCTGCTGGTaGAGGAGGTCCGGCACCAAC | + |
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Preference number: 2 (lower is better) Translates to: RDLTGPGLVLSMFPADNPPVCCW*RRSGTN Trigger: GTTGGTGCCGGACCTCCTCCACCAGCAGCACACTGG...AGGGTTGTCAGCAGGGAACATTGACAGCACAAGGCCTGGTCCTGTGAGATCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR-3UTR GCA 90 bp | GTGCCACTGGCTCCTGCCCAAGAGGACTCCCTGCACAGGTTAAGGCATGGCTTTTGGAACTCAGAAATCTaGCTGCCTCTGCCTCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: VPLAPAQEDSLHRLRHGFWNSEI*LPLPPK Trigger: CTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCCA...AAAGCCATGCCTTAACCTGTGCAGGGAGTCCTCTTGGGCAGGAGCCAGTGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR-3UTR CCA 90 bp | CTGAAGCCAGTGTGCTGCTGGTGGAGGAGGTCCGGCACCAACACCGGCAGAAGCTTAATGTTCTCGATATaGCAGAGCAGCCCCAGACAA | + |
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Preference number: 2 (lower is better) Translates to: LKPVCCWWRRSGTNTGRSLMFSI*QSSPRQ Trigger: TTGTCTGGGGCTGCTCTGCCATATCGAGAACATTAA...GCTTCTGCCGGTGTTGGTGCCGGACCTCCTCCACCAGCAGCACACTGGCTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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| 3UTR-3UTR GCA 90 bp | GCATGGCGAGCTCGTGCCACTGGCTCCTGCCCAAGAGGACTCCCTGCACAGGTTCCAGGTTATACTGCATaGTGCTCACATGGTAGATTT | + |
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Preference number: 2 (lower is better) Translates to: AWRARATGSCPRGLPAQVPGYTA*CSHGRF Trigger: AAATCTACCATGTGAGCAGCATGCAGTATAACCTGG...AACCTGTGCAGGGAGTCCTCTTGGGCAGGAGCCAGTGGCACGAGCTCGCCATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR-3UTR CCA 90 bp | CAACTGAAGCCAGTGTGCTGCTGGTGGAGGAGGTCCGGCACCAACACCGGCAGATTAATGTTCTCGATATaGCAGAGCAGCCCCAGACAA | + |
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Preference number: 2 (lower is better) Translates to: QLKPVCCWWRRSGTNTGRLMFSI*QSSPRQ Trigger: TTGTCTGGGGCTGCTCTGCCATATCGAGAACATTAA...TCTGCCGGTGTTGGTGCCGGACCTCCTCCACCAGCAGCACACTGGCTTCAGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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| 3UTR-3UTR CCA 90 bp | GTGCCACTGGCTCCTGCCCAAGAGGACTCCCTGCACAGGTTAAGGCATGGCTTTGAGGGCCTGGCTTTCTaGAGATCTAGGAGATGGTTA | + |
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Preference number: 2 (lower is better) Translates to: VPLAPAQEDSLHRLRHGFEGLAF*RSRRWL Trigger: TAACCATCTCCTAGATCTCCAGAAAGCCAGGCCCTC...AAAGCCATGCCTTAACCTGTGCAGGGAGTCCTCTTGGGCAGGAGCCAGTGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR-3UTR GCA 90 bp | CAGCAACTGAAGCCAGTGTGCTGCTGGTGGAGGAGGTCCGGCACCAACACCGGCGAAGTCAGTATGTGGTaGTTTGATTTCTTCCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: QQLKPVCCWWRRSGTNTGEVSMW*FDFFLH Trigger: ATGCAGGAAGAAATCAAAGCACCACATACTGACTTC...GCCGGTGTTGGTGCCGGACCTCCTCCACCAGCAGCACACTGGCTTCAGTTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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| 3UTR-3UTR CCA 90 bp | CGCTCTCCACGCGTACTCACGGGATGCAGAGATGGACTCTTTGGTAAGCTAAAGCATCTGGAAGGCTGTTaGGAGTCAGGCCGAATCCTG | + |
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Preference number: 2 (lower is better) Translates to: RSPRVLTGCRDGLFGKLKHLEGC*ESGRIL Trigger: CAGGATTCGGCCTGACTCCCAACAGCCTTCCAGATG...CTTTAGCTTACCAAAGAGTCCATCTCTGCATCCCGTGAGTACGCGTGGAGAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR-3UTR GCA 90 bp | ACTCTGCTTGCTGTTCAGAGGCTTGCCAGGCAAGCAGCTGGAGGTACAGTGCGCGTAACTTTCTGCCTGTaGCCTATTTCCTCACAACAC | + |
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Preference number: 2 (lower is better) Translates to: TLLAVQRLARQAAGGTVRVTFCL*PISSQH Trigger: GTGTTGTGAGGAAATAGGGCACAGGCAGAAAGTTAC...GCGCACTGTACCTCCAGCTGCTTGCCTGGCAAGCCTCTGAACAGCAAGCAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR-3UTR CCA 90 bp | TGTGCTGCTGGTGGAGGAGGTCCGGCACCAACACCGGCAGAAGCTGTACTGCTGTGTGAAGTCAGTATGTaGTGCTTTGATTTCTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: CAAGGGGPAPTPAEAVLLCEVSM*CFDFFL Trigger: CAGGAAGAAATCAAAGCACCACATACTGACTTCACA...CAGCAGTACAGCTTCTGCCGGTGTTGGTGCCGGACCTCCTCCACCAGCAGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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| 3UTR CAA 90 bp | ATCCTTAAGAGCAAATGGGGCGCTCAAAAATCATCTGGAAGGCTGTaGGGAGTCAGGCCGAATCCTGGCCTTCTCAAGATGGCCCATGAG | + |
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Preference number: 2 (lower is better) Translates to: ILKSKWGAQKSSGRL*GVRPNPGLLKMAHE Trigger: CTCATGGGCCATCTTGAGAAGGCCAGGATTCGGCCTGACTCCCAACAGCCTTCCAGATGATTTTTGAGCGCCCCATTTGCTCTTAAGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR-3UTR TCA 90 bp | AAGACCCTTCTGGTCCTAGTAGACGGTCCTCTAGCAAGCTCTGATATCCACACTCTGTGGCACAGAGGCTaGCAGCCTCTGATCATGAAG | + |
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Preference number: 2 (lower is better) Translates to: KTLLVLVDGPLASSDIHTLWHRG*QPLIMK Trigger: CTTCATGATCAGAGGCTGTCAGCCTCTGTGCCACAG...AGTGTGGATATCAGAGCTTGCTAGAGGACCGTCTACTAGGACCAGAAGGGTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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| 3UTR-3UTR GCA 90 bp | CTGAAGCCAGTGTGCTGCTGGTGGAGGAGGTCCGGCACCAACACCGGCAGAAGCGCTTTGATTTCTTCCTaGATCATGCAATTTCTAAGT | + |
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Preference number: 2 (lower is better) Translates to: LKPVCCWWRRSGTNTGRSALISS*IMQFLS Trigger: ACTTAGAAATTGCATGATGCAGGAAGAAATCAAAGC...GCTTCTGCCGGTGTTGGTGCCGGACCTCCTCCACCAGCAGCACACTGGCTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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| 3UTR CAA 90 bp | CGAACCTGTGCACTCCCTCTCAGAAACCTGTCACTAAAGAACAACTaGTTCCAGGTCCCAAGACTTCATCCAGCTGACACTCACAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: RTCALPLRNLSLKNN*FQVPRLHPADTHRP Trigger: AGGCCTGTGAGTGTCAGCTGGATGAAGTCTTGGGACCTGGAACAAGTTGTTCTTTAGTGACAGGTTTCTGAGAGGGAGTGCACAGGTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR-3UTR TCA 90 bp | CTCAAAAATCATCTGGAAGGCTGTTGGGAGTCAGGCCGAATCCTGGCCTTCTCAGATGTTTACAGCAACTaGAGCCAGTGTGCTGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: LKNHLEGCWESGRILAFSDVYSN*SQCAAG Trigger: ACCAGCAGCACACTGGCTTCAGTTGCTGTAAACATC...TGAGAAGGCCAGGATTCGGCCTGACTCCCAACAGCCTTCCAGATGATTTTTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR-3UTR CCA 90 bp | ACTCTGCTTGCTGTTCAGAGGCTTGCCAGGCAAGCAGCTGGAGGTACAGTGCGCTGTGAAGTCAGTATGTaGTGCTTTGATTTCTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: TLLAVQRLARQAAGGTVRCEVSM*CFDFFL Trigger: CAGGAAGAAATCAAAGCACCACATACTGACTTCACA...GCGCACTGTACCTCCAGCTGCTTGCCTGGCAAGCCTCTGAACAGCAAGCAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR-3UTR TCA 90 bp | GTGCCACTGGCTCCTGCCCAAGAGGACTCCCTGCACAGGTTAAGGCATGGCTTTTGGTGTCTACAACTATaGAGAACATCATGTTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: VPLAPAQEDSLHRLRHGFWCLQL*RTSCCH Trigger: ATGACAACATGATGTTCTTCATAGTTGTAGACACCA...AAAGCCATGCCTTAACCTGTGCAGGGAGTCCTCTTGGGCAGGAGCCAGTGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR-3UTR GCA 90 bp | GGTGGGGAGAACTACCCGAAGGGATCTCACAGGACCAGGCCTTGTGCTGTCAATGAAGTCAGTATGTGGTaGTTTGATTTCTTCCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: GGENYPKGSHRTRPCAVNEVSMW*FDFFLH Trigger: ATGCAGGAAGAAATCAAAGCACCACATACTGACTTC...ATTGACAGCACAAGGCCTGGTCCTGTGAGATCCCTTCGGGTAGTTCTCCCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR-3UTR TCA 90 bp | ATCCACTCAGAGATGTTTACAGCAACTGAAGCCAGTGTGCTGCTGGTGGAGGAGCAGTATGTGGTGCTTTaGTTTCTTCCTGCATCATGC | + |
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Preference number: 2 (lower is better) Translates to: IHSEMFTATEASVLLVEEQYVVL*FLPASC Trigger: GCATGATGCAGGAAGAAATCAAAGCACCACATACTG...CTCCTCCACCAGCAGCACACTGGCTTCAGTTGCTGTAAACATCTCTGAGTGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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| 3UTR-3UTR GCA 90 bp | CTCAAAAATCATCTGGAAGGCTGTTGGGAGTCAGGCCGAATCCTGGCCTTCTCATGTATGGTAACTTTCTaGCTGTGCCCTATTTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: LKNHLEGCWESGRILAFSCMVTF*LCPISS Trigger: TGAGGAAATAGGGCACAGGCAGAAAGTTACCATACA...TGAGAAGGCCAGGATTCGGCCTGACTCCCAACAGCCTTCCAGATGATTTTTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR-3UTR CCA 90 bp | CGCTCTCCACGCGTACTCACGGGATGCAGAGATGGACTCTTTGGTAAGCTAAAGCAATCTCCTTATCATTaGGCTAGGAAATGGCTTAAG | + |
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Preference number: 2 (lower is better) Translates to: RSPRVLTGCRDGLFGKLKQSPYH*ARKWLK Trigger: CTTAAGCCATTTCCTAGCCCAATGATAAGGAGATTG...CTTTAGCTTACCAAAGAGTCCATCTCTGCATCCCGTGAGTACGCGTGGAGAGCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR-3UTR GCA 90 bp | CTCAAAAATCATCTGGAAGGCTGTTGGGAGTCAGGCCGAATCCTGGCCTTCTCAGTGACTGAACACACTTaGCTTATAAAATTAAGACCA | + |
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Preference number: 2 (lower is better) Translates to: LKNHLEGCWESGRILAFSVTEHT*LIKLRP Trigger: TGGTCTTAATTTTATAAGGCAAGTGTGTTCAGTCAC...TGAGAAGGCCAGGATTCGGCCTGACTCCCAACAGCCTTCCAGATGATTTTTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR-3UTR GCA 90 bp | GACTTTAGTGACCAACCTCACTGTCACTCACCTAGGATCATCTCACTGGCACACGCTTTGATTTCTTCCTaGATCATGCAATTTCTAAGT | + |
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Preference number: 2 (lower is better) Translates to: DFSDQPHCHSPRIISLAHALISS*IMQFLS Trigger: ACTTAGAAATTGCATGATGCAGGAAGAAATCAAAGC...GTGTGCCAGTGAGATGATCCTAGGTGAGTGACAGTGAGGTTGGTCACTAAAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR-3UTR TCA 90 bp | GACAAGTATACGAGAAAGAAAAAGAGCTTGTCATTACTGACAGAGCCATCAAGACAGTATGTGGTGCTTTaGTTTCTTCCTGCATCATGC | + |
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Preference number: 2 (lower is better) Translates to: DKYTRKKKSLSLLTEPSRQYVVL*FLPASC Trigger: GCATGATGCAGGAAGAAATCAAAGCACCACATACTG...TCTTGATGGCTCTGTCAGTAATGACAAGCTCTTTTTCTTTCTCGTATACTTGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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| 3UTR-3UTR GCA 90 bp | GACAAGTATACGAGAAAGAAAAAGAGCTTGTCATTACTGACAGAGCCATCAAGAAAGGCTAAGAAGAGCTaGAATCTCCTTATCATTGGG | + |
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Preference number: 2 (lower is better) Translates to: DKYTRKKKSLSLLTEPSRKAKKS*NLLIIG Trigger: CCCAATGATAAGGAGATTGCAGCTCTTCTTAGCCTT...TCTTGATGGCTCTGTCAGTAATGACAAGCTCTTTTTCTTTCTCGTATACTTGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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| 3UTR CAA 90 bp | CCAAAGAACCAATGTCAGATCTGTCTAAACAAACCCCAGAGAACTTaGTGGTACACTGATTACACAATGACCTTCAATCAACACTATTTC | + |
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Preference number: 2 (lower is better) Translates to: PKNQCQICLNKPQRT*WYTDYTMTFNQHYF Trigger: GAAATAGTGTTGATTGAAGGTCATTGTGTAATCAGTGTACCACAAAGTTCTCTGGGGTTTGTTTAGACAGATCTGACATTGGTTCTTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| 3UTR GCA 72 bp | GCTCCTCAGGCATGGCGAGCTCGTGCCACTGGCTCCTaGCCAAGAGGACTCCCTGCACAGGTTAAGGCATGG | + |
|
Preference number: 3 (lower is better) Translates to: APQAWRARATGS*PRGLPAQVKAW Trigger: CCATGCCTTAACCTGTGCAGGGAGTCCTCTTGGGCAGGAGCCAGTGGCACGAGCTCGCCATGCCTGAGGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| 3UTR GCA 72 bp | TGCAGCCATGCATGCTCCTCAGGCATGGCGAGCTCGTaGCACTGGCTCCTGCCCAAGAGGACTCCCTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: CSHACSSGMASS*HWLLPKRTPCT Trigger: TGTGCAGGGAGTCCTCTTGGGCAGGAGCCAGTGGCACGAGCTCGCCATGCCTGAGGAGCATGCATGGCTGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| 3UTR GCA 72 bp | TTCAGAGGCTTGCCAGGCAAGCAGCTGGAGGTACAGTaGGCTCGCTCTCCACGCGTACTCACGGGATGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: FRGLPGKQLEVQ*ARSPRVLTGCR Trigger: TCTGCATCCCGTGAGTACGCGTGGAGAGCGAGCGCACTGTACCTCCAGCTGCTTGCCTGGCAAGCCTCTGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| 3UTR GCA 72 bp | AGAACCAGAGTGCGAGCTCTGAACTGCAGCCATGCATaGTCCTCAGGCATGGCGAGCTCGTGCCACTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RTRVRALNCSHA*SSGMASSCHWL Trigger: GAGCCAGTGGCACGAGCTCGCCATGCCTGAGGAGCATGCATGGCTGCAGTTCAGAGCTCGCACTCTGGTTCT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| 3UTR GCA 72 bp | CAGCAGAACCAGAGTGCGAGCTCTGAACTGCAGCCATaGATGCTCCTCAGGCATGGCGAGCTCGTGCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: QQNQSASSELQP*MLLRHGELVPL Trigger: CAGTGGCACGAGCTCGCCATGCCTGAGGAGCATGCATGGCTGCAGTTCAGAGCTCGCACTCTGGTTCTGCTG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| 3UTR CCA 72 bp | TCTGCTTGCTGTTCAGAGGCTTGCCAGGCAAGCAGCTaGAGGTACAGTGCGCTCGCTCTCCACGCGTACTCA | + |
|
Preference number: 3 (lower is better) Translates to: SACCSEACQASS*RYSALALHAYS Trigger: TGAGTACGCGTGGAGAGCGAGCGCACTGTACCTCCAGCTGCTTGCCTGGCAAGCCTCTGAACAGCAAGCAGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| 3UTR GCA 72 bp | TCCACTCAGAGATGTTTACAGCAACTGAAGCCAGTGTaGTGCTGGTGGAGGAGGTCCGGCACCAACACCGGC | + |
|
Preference number: 3 (lower is better) Translates to: STQRCLQQLKPV*CWWRRSGTNTG Trigger: GCCGGTGTTGGTGCCGGACCTCCTCCACCAGCAGCACACTGGCTTCAGTTGCTGTAAACATCTCTGAGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| 3UTR GCA 72 bp | CCAGGCTGTCCTGGAACTCAGAAATCTGCCTGCCTCTaGCTCCCAAGTGCTGGGATTAAAGGTGCGCACCAC | + |
|
Preference number: 3 (lower is better) Translates to: PGCPGTQKSACL*LPSAGIKGAHH Trigger: GTGGTGCGCACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCCAGGACAGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| 3UTR CCA 72 bp | CAGAGATGTTTACAGCAACTGAAGCCAGTGTGCTGCTaGTGGAGGAGGTCCGGCACCAACACCGGCAGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: QRCLQQLKPVCC*WRRSGTNTGRS Trigger: GCTTCTGCCGGTGTTGGTGCCGGACCTCCTCCACCAGCAGCACACTGGCTTCAGTTGCTGTAAACATCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| 3UTR TCA 72 bp | AGTCAGGCCGAATCCTGGCCTTCTCAAGATGGCCCATaGGAGGACAAGAGAGCTCAGTCCTGTGTCGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SQAESWPSQDGP*EDKRAQSCVVL Trigger: GAGGACGACACAGGACTGAGCTCTCTTGTCCTCTCATGGGCCATCTTGAGAAGGCCAGGATTCGGCCTGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| 3UTR GCA 72 bp | ACTCAGAGATGTTTACAGCAACTGAAGCCAGTGTGCTaGTGGTGGAGGAGGTCCGGCACCAACACCGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: TQRCLQQLKPVC*WWRRSGTNTGR Trigger: TCTGCCGGTGTTGGTGCCGGACCTCCTCCACCAGCAGCACACTGGCTTCAGTTGCTGTAAACATCTCTGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| 3UTR CCA 72 bp | AGATGTTTACAGCAACTGAAGCCAGTGTGCTGCTGGTaGAGGAGGTCCGGCACCAACACCGGCAGAAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: RCLQQLKPVCCW*RRSGTNTGRSC Trigger: ACAGCTTCTGCCGGTGTTGGTGCCGGACCTCCTCCACCAGCAGCACACTGGCTTCAGTTGCTGTAAACATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| 3UTR CCA 72 bp | AGCTCAGTCCTGTGTCGTCCTCACACAACGCACACTTaGCAAGCTCTGGGCTGGGGCCTTGATGGAGTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: SSVLCRPHTTHT*QALGWGLDGVK Trigger: CTTAACTCCATCAAGGCCCCAGCCCAGAGCTTGCCAAGTGTGCGTTGTGTGAGGACGACACAGGACTGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| 3UTR-3UTR CAA 90 bp | CTCAAAAATCATCTGGAAGGCTGTTGGGAGTCAGGCCGAATCCTGGCCTTCTCATCACACAACGCACACTaGGCAAGCTCTGGGCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LKNHLEGCWESGRILAFSSHNAH*ASSGLG Trigger: CCCCAGCCCAGAGCTTGCCAAGTGTGCGTTGTGTGA...TGAGAAGGCCAGGATTCGGCCTGACTCCCAACAGCCTTCCAGATGATTTTTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| 3UTR TCA 72 bp | TTCTGGGATCATCCACTCAGAGATGTTTACAGCAACTaGAGCCAGTGTGCTGCTGGTGGAGGAGGTCCGGCA | + |
|
Preference number: 3 (lower is better) Translates to: FWDHPLRDVYSN*SQCAAGGGGPA Trigger: TGCCGGACCTCCTCCACCAGCAGCACACTGGCTTCAGTTGCTGTAAACATCTCTGAGTGGATGATCCCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| 3UTR GCA 72 bp | GCTCCTAAATTAAACTCTGCTTGCTGTTCAGAGGCTTaGCAGGCAAGCAGCTGGAGGTACAGTGCGCTCGCT | + |
|
Preference number: 3 (lower is better) Translates to: APKLNSACCSEA*QASSWRYSALA Trigger: AGCGAGCGCACTGTACCTCCAGCTGCTTGCCTGGCAAGCCTCTGAACAGCAAGCAGAGTTTAATTTAGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| 3UTR CCA 72 bp | CGTCCTCACACAACGCACACTTGGCAAGCTCTGGGCTaGGGCCTTGATGGAGTTAAGATTTTGGTTCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: RPHTTHTWQALG*GLDGVKILVPE Trigger: CTCAGGAACCAAAATCTTAACTCCATCAAGGCCCCAGCCCAGAGCTTGCCAAGTGTGCGTTGTGTGAGGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| 3UTR CCA 72 bp | GCAAATGGGGCGCTCAAAAATCATCTGGAAGGCTGTTaGGAGTCAGGCCGAATCCTGGCCTTCTCAAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: ANGALKNHLEGC*ESGRILAFSRW Trigger: CCATCTTGAGAAGGCCAGGATTCGGCCTGACTCCCAACAGCCTTCCAGATGATTTTTGAGCGCCCCATTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| 3UTR-3UTR CAA 90 bp | TGTGCTGCTGGTGGAGGAGGTCCGGCACCAACACCGGCAGAAGCTGTACTGCTGAGAAAGAAAAAGAGCTaGTCATTACTGACAGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: CAAGGGGPAPTPAEAVLLRKKKS*SLLTEP Trigger: TGGCTCTGTCAGTAATGACAAGCTCTTTTTCTTTCT...CAGCAGTACAGCTTCTGCCGGTGTTGGTGCCGGACCTCCTCCACCAGCAGCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| 3UTR CCA 72 bp | TGTGTCGTCCTCACACAACGCACACTTGGCAAGCTCTaGGCTGGGGCCTTGATGGAGTTAAGATTTTGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: CVVLTQRTLGKL*AGALMELRFWF Trigger: GAACCAAAATCTTAACTCCATCAAGGCCCCAGCCCAGAGCTTGCCAAGTGTGCGTTGTGTGAGGACGACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| 3UTR TCA 72 bp | CACAGGACCAGGCCTTGTGCTGTCAATGTTCCCTGCTaGCAACCCTGTGCTCACATCAGTTACAAAGCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: HRTRPCAVNVPC*QPCAHISYKAC Trigger: ACAAGCTTTGTAACTGATGTGAGCACAGGGTTGTCAGCAGGGAACATTGACAGCACAAGGCCTGGTCCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| 3UTR CCA 72 bp | ATTGGTGGTACCGTCAGGTGCTGGGCTTCAAAAACTTaGCAAGTTCCAGACAGGCACTGTTTAGCCCAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: IGGTVRCWASKT*QVPDRHCLAQA Trigger: TGCTTGGGCTAAACAGTGCCTGTCTGGAACTTGCCAAGTTTTTGAAGCCCAGCACCTGACGGTACCACCAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| 3UTR-3UTR CAA 90 bp | AGGGATCTCACAGGACCAGGCCTTGTGCTGTCAATGTTCCCTGCTGACAACCCTTCAGTATGTGGTGCTTaGATTTCTTCCTGCATCATG | + |
|
Preference number: 3 (lower is better) Translates to: RDLTGPGLVLSMFPADNPSVCGA*ISSCIM Trigger: CATGATGCAGGAAGAAATCAAAGCACCACATACTGA...AGGGTTGTCAGCAGGGAACATTGACAGCACAAGGCCTGGTCCTGTGAGATCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| 3UTR CCA 72 bp | ACACAGGAGGGCCTGGCTTTCTGGAGATCTAGGAGATaGTTACAGCACATGCCACTCAAGTCTGTAAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TQEGLAFWRSRR*LQHMPLKSVSF Trigger: AAAGCTTACAGACTTGAGTGGCATGTGCTGTAACCATCTCCTAGATCTCCAGAAAGCCAGGCCCTCCTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| 3UTR GCA 72 bp | TTTGTACTTCCCATACTGCCAGGTTATACTGCATGCTaGTCACATGGTAGATTTCCACACTGCCAGGGACTC | + |
|
Preference number: 3 (lower is better) Translates to: FVLPILPGYTAC*SHGRFPHCQGL Trigger: GAGTCCCTGGCAGTGTGGAAATCTACCATGTGAGCAGCATGCAGTATAACCTGGCAGTATGGGAAGTACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| 3UTR CCA 72 bp | CATTCATCGTGGAGCTATCACATCCTTAAGAGCAAATaGGGCGCTCAAAAATCATCTGGAAGGCTGTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: HSSWSYHILKSK*GAQKSSGRLLG Trigger: TCCCAACAGCCTTCCAGATGATTTTTGAGCGCCCCATTTGCTCTTAAGGATGTGATAGCTCCACGATGAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| 3UTR CCA 72 bp | TTTGGTAAGCTAAAGGACAAAGGTCTCCATTCATCGTaGAGCTATCACATCCTTAAGAGCAAATGGGGCGCT | + |
|
Preference number: 3 (lower is better) Translates to: FGKLKDKGLHSS*SYHILKSKWGA Trigger: AGCGCCCCATTTGCTCTTAAGGATGTGATAGCTCCACGATGAATGGAGACCTTTGTCCTTTAGCTTACCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| 3UTR GCA 72 bp | GCCCAGCGTTCCTATAATCTTTATTTTCCGAACCTGTaGACTCCCTCTCAGAAACCTGTCACTAAAGAACAA | + |
|
Preference number: 3 (lower is better) Translates to: AQRSYNLYFPNL*TPSQKPVTKEQ Trigger: TTGTTCTTTAGTGACAGGTTTCTGAGAGGGAGTGCACAGGTTCGGAAAATAAAGATTATAGGAACGCTGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| 3UTR CCA 72 bp | ACTGACAGAGCCATCAAGAAAATGAGTCCTGCCCAATaGGCACAGGATCTGAATCTCTGCTATAACATGAAT | + |
|
Preference number: 3 (lower is better) Translates to: TDRAIKKMSPAQ*AQDLNLCYNMN Trigger: ATTCATGTTATAGCAGAGATTCAGATCCTGTGCCCATTGGGCAGGACTCATTTTCTTGATGGCTCTGTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| 3UTR GCA 72 bp | TCAATCAACACTATTTCCCCTTTGTACTTCCCATACTaGCAGGTTATACTGCATGCTGCTCACATGGTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: SINTISPLYFPY*QVILHAAHMVD Trigger: ATCTACCATGTGAGCAGCATGCAGTATAACCTGGCAGTATGGGAAGTACAAAGGGGAAATAGTGTTGATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| 3UTR GCA 72 bp | CAGACAATAACAACCAGGTTAAAGGCTAAGAAGAGCTaGAATCTCCTTATCATTGGGCTAGGAAATGGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: QTITTRLKAKKS*NLLIIGLGNGL Trigger: TAAGCCATTTCCTAGCCCAATGATAAGGAGATTGCAGCTCTTCTTAGCCTTTAACCTGGTTGTTATTGTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| 3UTR-3UTR CAA 90 bp | AATATAAGTGTGCTGTTTCGGTCAGTTCTGGGATCATCCACTCAGAGATGTTTATCAGTATGTGGTGCTTaGATTTCTTCCTGCATCATG | + |
|
Preference number: 3 (lower is better) Translates to: NISVLFRSVLGSSTQRCLSVCGA*ISSCIM Trigger: CATGATGCAGGAAGAAATCAAAGCACCACATACTGA...TAAACATCTCTGAGTGGATGATCCCAGAACTGACCGAAACAGCACACTTATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| 3UTR TCA 72 bp | ACAAGTATACGAGAAAGAAAAAGAGCTTGTCATTACTaGCAGAGCCATCAAGAAAATGAGTCCTGCCCAATG | + |
|
Preference number: 3 (lower is better) Translates to: TSIRERKRACHY*QSHQENESCPM Trigger: CATTGGGCAGGACTCATTTTCTTGATGGCTCTGTCAGTAATGACAAGCTCTTTTTCTTTCTCGTATACTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| 3UTR TCA 72 bp | AACCCCAGAGAACTTTGTGGTACACTGATTACACAATaGCCTTCAATCAACACTATTTCCCCTTTGTACTTC | + |
|
Preference number: 3 (lower is better) Translates to: NPRELCGTLITQ*PSINTISPLYF Trigger: GAAGTACAAAGGGGAAATAGTGTTGATTGAAGGTCATTGTGTAATCAGTGTACCACAAAGTTCTCTGGGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| 3UTR TCA 72 bp | CTGTCTAAACAAACCCCAGAGAACTTTGTGGTACACTaGTTACACAATGACCTTCAATCAACACTATTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LSKQTPENFVVH*LHNDLQSTLFP Trigger: GGGAAATAGTGTTGATTGAAGGTCATTGTGTAATCAGTGTACCACAAAGTTCTCTGGGGTTTGTTTAGACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| 3UTR CCA 72 bp | TGTCAGATCTGTCTAAACAAACCCCAGAGAACTTTGTaGTACACTGATTACACAATGACCTTCAATCAACAC | + |
|
Preference number: 3 (lower is better) Translates to: CQICLNKPQRTL*YTDYTMTFNQH Trigger: GTGTTGATTGAAGGTCATTGTGTAATCAGTGTACCACAAAGTTCTCTGGGGTTTGTTTAGACAGATCTGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| 3UTR TCA 72 bp | TGTCATGCTAGAGGGTTCAGATTTTATCAGAGTGACTaGACACACTTGCCTTATAAAATTAAGACCAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: CHARGFRFYQSD*THLPYKIKTSR Trigger: TCTGCTGGTCTTAATTTTATAAGGCAAGTGTGTTCAGTCACTCTGATAAAATCTGAACCCTCTAGCATGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| 3UTR TCA 72 bp | AGACCAGCAGAAGTTTTTAGAGTGTGGGACAGGGAATaGGATTATTTATCTTATCTCAGAAGGGATAACATT | + |
|
Preference number: 3 (lower is better) Translates to: RPAEVFRVWDRE*DYLSYLRRDNI Trigger: AATGTTATCCCTTCTGAGATAAGATAAATAATCTCATTCCCTGTCCCACACTCTAAAAACTTCTGCTGGTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| CDS-3UTR CCA 90 bp | TGTGCTGCTGGTGGAGGAGGTCCGGCACCAACACCGGCAGAAGCTGTACTGCTGCCGAGCTCTGCCCTCTaGCTCCTCTTCGCCCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: CAAGGGGPAPTPAEAVLLPSSAL*LLFALG Trigger: GCCGAGGGCGAAGAGGAGCCAGAGGGCAGAGCTCGG...CAGCAGTACAGCTTCTGCCGGTGTTGGTGCCGGACCTCCTCCACCAGCAGCACA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR TCA 90 bp | CAACTGAAGCCAGTGTGCTGCTGGTGGAGGAGGTCCGGCACCAACACCGGCAGAAAGGGACGTCACCACTaGGCTTCCGGGCTGAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: QLKPVCCWWRRSGTNTGRKGRHH*ASGLRH Trigger: GTGTCTCAGCCCGGAAGCTCAGTGGTGACGTCCCTT...TCTGCCGGTGTTGGTGCCGGACCTCCTCCACCAGCAGCACACTGGCTTCAGTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR CCA 90 bp | TGTGCTGCTGGTGGAGGAGGTCCGGCACCAACACCGGCAGAAGCTGTACTGCTGCAAAGTCTACCCCTTTaGCTGTCTGGCTCTGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: CAAGGGGPAPTPAEAVLLQSLPL*LSGSGT Trigger: TGTCCCAGAGCCAGACAGCCAAAGGGGTAGACTTTG...CAGCAGTACAGCTTCTGCCGGTGTTGGTGCCGGACCTCCTCCACCAGCAGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR TCA 90 bp | CAGCAACTGAAGCCAGTGTGCTGCTGGTGGAGGAGGTCCGGCACCAACACCGGCAAGCGTTGCTCCTTCTaGAGCAGGTTTTGTGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: QQLKPVCCWWRRSGTNTGKRCSF*SRFCDE Trigger: CTCATCACAAAACCTGCTTCAGAAGGAGCAACGCTT...GCCGGTGTTGGTGCCGGACCTCCTCCACCAGCAGCACACTGGCTTCAGTTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR GCA 90 bp | AGGGATCTCACAGGACCAGGCCTTGTGCTGTCAATGTTCCCTGCTGACAACCCTGGCACAGAGGGCATCTaGCCCCGTGGGATCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: RDLTGPGLVLSMFPADNPGTEGI*PRGIIM Trigger: CATGATGATCCCACGGGGGCAGATGCCCTCTGTGCC...AGGGTTGTCAGCAGGGAACATTGACAGCACAAGGCCTGGTCCTGTGAGATCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| CDS-3UTR TCA 90 bp | CTGAAGCCAGTGTGCTGCTGGTGGAGGAGGTCCGGCACCAACACCGGCAGAAGCCCAAAGTTGACTGACTaGTCACTGATGACCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LKPVCCWWRRSGTNTGRSPKLTD*SLMTSN Trigger: GTTTGAGGTCATCAGTGATCAGTCAGTCAACTTTGG...GCTTCTGCCGGTGTTGGTGCCGGACCTCCTCCACCAGCAGCACACTGGCTTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR GCA 90 bp | CAGCAACTGAAGCCAGTGTGCTGCTGGTGGAGGAGGTCCGGCACCAACACCGGCCCCTTTTGTTCCCTGTaGCTGAAAAAGTGGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: QQLKPVCCWWRRSGTNTGPFCSL*LKKWMT Trigger: TGTCATCCACTTTTTCAGGCACAGGGAACAAAAGGG...GCCGGTGTTGGTGCCGGACCTCCTCCACCAGCAGCACACTGGCTTCAGTTGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR GCA 90 bp | CTGAAGCCAGTGTGCTGCTGGTGGAGGAGGTCCGGCACCAACACCGGCAGAAGCTGGTATTTCTCTGTCTaGTTTCTCGGAAACGTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LKPVCCWWRRSGTNTGRSWYFSV*FLGNVG Trigger: TCCGACGTTTCCGAGAAAGCAGACAGAGAAATACCA...GCTTCTGCCGGTGTTGGTGCCGGACCTCCTCCACCAGCAGCACACTGGCTTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR GCA 90 bp | ATCCACTCAGAGATGTTTACAGCAACTGAAGCCAGTGTGCTGCTGGTGGAGGAGAGAGCCTCCTCTAGGTaGCGAGCTCTGCCCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IHSEMFTATEASVLLVEERASSR*RALPSG Trigger: GCCAGAGGGCAGAGCTCGGCACCTAGAGGAGGCTCT...CTCCTCCACCAGCAGCACACTGGCTTCAGTTGCTGTAAACATCTCTGAGTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR GCA 90 bp | CAACTGAAGCCAGTGTGCTGCTGGTGGAGGAGGTCCGGCACCAACACCGGCAGAACAGAGCGAGTTTTGTaGTTCCTTTCTGCAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QLKPVCCWWRRSGTNTGRTERVL*FLSAAE Trigger: TTCTGCTGCAGAAAGGAAGCACAAAACTCGCTCTGT...TCTGCCGGTGTTGGTGCCGGACCTCCTCCACCAGCAGCACACTGGCTTCAGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR GCA 90 bp | AAGACCCTTCTGGTCCTAGTAGACGGTCCTCTAGCAAGCTCTGATATCCACACTAGAGCCTCCTCTAGGTaGCGAGCTCTGCCCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KTLLVLVDGPLASSDIHTRASSR*RALPSG Trigger: GCCAGAGGGCAGAGCTCGGCACCTAGAGGAGGCTCT...AGTGTGGATATCAGAGCTTGCTAGAGGACCGTCTACTAGGACCAGAAGGGTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR CCA 90 bp | AGACTTCATCCAGCTGACACTCACAGGCCTGAAAACTGTCACCAAAGAACCAATCCGAGCTCTGCCCTCTaGCTCCTCTTCGCCCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: RLHPADTHRPENCHQRTNPSSAL*LLFALG Trigger: GCCGAGGGCGAAGAGGAGCCAGAGGGCAGAGCTCGG...ATTGGTTCTTTGGTGACAGTTTTCAGGCCTGTGAGTGTCAGCTGGATGAAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| CDS-3UTR CCA 90 bp | CTGAAGCCAGTGTGCTGCTGGTGGAGGAGGTCCGGCACCAACACCGGCAGAAGCCTGTGCCTGAAAAAGTaGATGACATCTTTTGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LKPVCCWWRRSGTNTGRSLCLKK*MTSFGL Trigger: TAACCCAAAAGATGTCATCCACTTTTTCAGGCACAG...GCTTCTGCCGGTGTTGGTGCCGGACCTCCTCCACCAGCAGCACACTGGCTTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR TCA 90 bp | ACTCTGCTTGCTGTTCAGAGGCTTGCCAGGCAAGCAGCTGGAGGTACAGTGCGCCCAAAGTTGACTGACTaGTCACTGATGACCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TLLAVQRLARQAAGGTVRPKLTD*SLMTSN Trigger: GTTTGAGGTCATCAGTGATCAGTCAGTCAACTTTGG...GCGCACTGTACCTCCAGCTGCTTGCCTGGCAAGCCTCTGAACAGCAAGCAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| CDS-3UTR CCA 90 bp | TGTGCTGCTGGTGGAGGAGGTCCGGCACCAACACCGGCAGAAGCTGTACTGCTGTTCTTCTCTGCAGTTTaGAAATACTGCTTTACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CAAGGGGPAPTPAEAVLLFFSAV*KYCFTR Trigger: CCTCGTAAAGCAGTATTTCCAAACTGCAGAGAAGAA...CAGCAGTACAGCTTCTGCCGGTGTTGGTGCCGGACCTCCTCCACCAGCAGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| 3UTR CAA 72 bp | GATTGGTGGTACCGTCAGGTGCTGGGCTTCAAAAACTaGGCAAGTTCCAGACAGGCACTGTTTAGCCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DWWYRQVLGFKN*ASSRQALFSPS Trigger: GCTTGGGCTAAACAGTGCCTGTCTGGAACTTGCCAAGTTTTTGAAGCCCAGCACCTGACGGTACCACCAATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| 3UTR CAA 72 bp | AGCAAATGGGGCGCTCAAAAATCATCTGGAAGGCTGTaGGGAGTCAGGCCGAATCCTGGCCTTCTCAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SKWGAQKSSGRL*GVRPNPGLLKM Trigger: CATCTTGAGAAGGCCAGGATTCGGCCTGACTCCCAACAGCCTTCCAGATGATTTTTGAGCGCCCCATTTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| CDS-3UTR TCA 90 bp | GTGCCACTGGCTCCTGCCCAAGAGGACTCCCTGCACAGGTTAAGGCATGGCTTTAAAACTGCTCTGGAATaGAGTTGGTGTTTCCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: VPLAPAQEDSLHRLRHGFKTALE*SWCFHA Trigger: AGCATGGAAACACCAACTTCATTCCAGAGCAGTTTT...AAAGCCATGCCTTAACCTGTGCAGGGAGTCCTCTTGGGCAGGAGCCAGTGGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| CDS-3UTR GCA 90 bp | TTTCGGTCAGTTCTGGGATCATCCACTCAGAGATGTTTACAGCAACTGAAGCCAGGCACAGAGGGCATCTaGCCCCGTGGGATCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: FRSVLGSSTQRCLQQLKPGTEGI*PRGIIM Trigger: CATGATGATCCCACGGGGGCAGATGCCCTCTGTGCC...TGGCTTCAGTTGCTGTAAACATCTCTGAGTGGATGATCCCAGAACTGACCGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR GCA 90 bp | CAATCTCCTTATCATTGGGCTAGGAAATGGCTTAAGGGAGTCACCGTTCAGAAACTAGGTGCCGAGCTCTaGCCTCTGGCTCCTCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: QSPYHWARKWLKGVTVQKLGAEL*PLAPLR Trigger: GCGAAGAGGAGCCAGAGGGCAGAGCTCGGCACCTAG...TTTCTGAACGGTGACTCCCTTAAGCCATTTCCTAGCCCAATGATAAGGAGATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR CCA 90 bp | ATCCACTCAGAGATGTTTACAGCAACTGAAGCCAGTGTGCTGCTGGTGGAGGAGCAAAGTCTACCCCTTTaGCTGTCTGGCTCTGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: IHSEMFTATEASVLLVEEQSLPL*LSGSGT Trigger: TGTCCCAGAGCCAGACAGCCAAAGGGGTAGACTTTG...CTCCTCCACCAGCAGCACACTGGCTTCAGTTGCTGTAAACATCTCTGAGTGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR TCA 90 bp | CTCAAAAATCATCTGGAAGGCTGTTGGGAGTCAGGCCGAATCCTGGCCTTCTCAGTCAGCAGCGAGAGCTaGACATTCTTCTCTGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LKNHLEGCWESGRILAFSVSSES*TFFSAV Trigger: AACTGCAGAGAAGAATGTTCAGCTCTCGCTGCTGAC...TGAGAAGGCCAGGATTCGGCCTGACTCCCAACAGCCTTCCAGATGATTTTTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| CDS-3UTR CCA 90 bp | ATCCACTCAGAGATGTTTACAGCAACTGAAGCCAGTGTGCTGCTGGTGGAGGAGGCCTTTCATCTGGAATaGAGCCTAAGCCGTACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IHSEMFTATEASVLLVEEAFHLE*SLSRTE Trigger: CTCTGTACGGCTTAGGCTCCATTCCAGATGAAAGGC...CTCCTCCACCAGCAGCACACTGGCTTCAGTTGCTGTAAACATCTCTGAGTGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR CCA 90 bp | GAGATGTTTACAGCAACTGAAGCCAGTGTGCTGCTGGTGGAGGAGGTCCGGCACTCATCATGGTTGCCGTaGATACTAAATACTGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: EMFTATEASVLLVEEVRHSSWLP*ILNTGM Trigger: CATTCCAGTATTTAGTATCCACGGCAACCATGATGA...GTGCCGGACCTCCTCCACCAGCAGCACACTGGCTTCAGTTGCTGTAAACATCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR CCA 90 bp | TCTCCTTATCATTGGGCTAGGAAATGGCTTAAGGGAGTCACCGTTCAGAAAACGCCCGGGCTCTGCTCATaGCCTCTCGAACTTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: SPYHWARKWLKGVTVQKTPGLCS*PLELHH Trigger: ATGATGAAGTTCGAGAGGCCATGAGCAGAGCCCGGG...CGTTTTCTGAACGGTGACTCCCTTAAGCCATTTCCTAGCCCAATGATAAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| 3UTR CAA 72 bp | GCACTCCCTCTCAGAAACCTGTCACTAAAGAACAACTaGTTCCAGGTCCCAAGACTTCATCCAGCTGACACT | + |
|
Preference number: 4 (lower is better) Translates to: ALPLRNLSLKNN*FQVPRLHPADT Trigger: AGTGTCAGCTGGATGAAGTCTTGGGACCTGGAACAAGTTGTTCTTTAGTGACAGGTTTCTGAGAGGGAGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| CDS-3UTR TCA 90 bp | GACAAGTATACGAGAAAGAAAAAGAGCTTGTCATTACTGACAGAGCCATCAAGAAAGGGACGTCACCACTaGGCTTCCGGGCTGAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: DKYTRKKKSLSLLTEPSRKGRHH*ASGLRH Trigger: GTGTCTCAGCCCGGAAGCTCAGTGGTGACGTCCCTT...TCTTGATGGCTCTGTCAGTAATGACAAGCTCTTTTTCTTTCTCGTATACTTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR GCA 90 bp | TTAGTGACCAACCTCACTGTCACTCACCTAGGATCATCTCACTGGCACACAGACCCCTTTTGTTCCCTGTaGCTGAAAAAGTGGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: LVTNLTVTHLGSSHWHTDPFCSL*LKKWMT Trigger: TGTCATCCACTTTTTCAGGCACAGGGAACAAAAGGG...GTCTGTGTGCCAGTGAGATGATCCTAGGTGAGTGACAGTGAGGTTGGTCACTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| CDS-3UTR CCA 90 bp | TCTCCTTATCATTGGGCTAGGAAATGGCTTAAGGGAGTCACCGTTCAGAAAACGGCCTTTCATCTGGAATaGAGCCTAAGCCGTACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPYHWARKWLKGVTVQKTAFHLE*SLSRTE Trigger: CTCTGTACGGCTTAGGCTCCATTCCAGATGAAAGGC...CGTTTTCTGAACGGTGACTCCCTTAAGCCATTTCCTAGCCCAATGATAAGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR TCA 90 bp | TCTCCTTATCATTGGGCTAGGAAATGGCTTAAGGGAGTCACCGTTCAGAAAACGATTGACCGTCCAAAGTaGTTCACAAACCCAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SPYHWARKWLKGVTVQKTIDRPK*FTNPAQ Trigger: CTGTGCTGGGTTTGTGAATCACTTTGGACGGTCAAT...CGTTTTCTGAACGGTGACTCCCTTAAGCCATTTCCTAGCCCAATGATAAGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR TCA 90 bp | AAGACCCTTCTGGTCCTAGTAGACGGTCCTCTAGCAAGCTCTGATATCCACACTGCTGCTGCTCATTTTTaGTTGGGCCAATTTTACACT | + |
|
Preference number: 4 (lower is better) Translates to: KTLLVLVDGPLASSDIHTAAAHF*LGQFYT Trigger: AGTGTAAAATTGGCCCAATCAAAAATGAGCAGCAGC...AGTGTGGATATCAGAGCTTGCTAGAGGACCGTCTACTAGGACCAGAAGGGTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR TCA 90 bp | CCTTATCATTGGGCTAGGAAATGGCTTAAGGGAGTCACCGTTCAGAAAACGATAGTCAGCAGCGAGAGCTaGACATTCTTCTCTGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PYHWARKWLKGVTVQKTIVSSES*TFFSAV Trigger: AACTGCAGAGAAGAATGTTCAGCTCTCGCTGCTGAC...TATCGTTTTCTGAACGGTGACTCCCTTAAGCCATTTCCTAGCCCAATGATAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR TCA 90 bp | TCCTGGGACTTCATCCCGTTGTATGGTAACTTTCTGCCTGTGCCCTATTTCCTCGTCATCATCCTCATCTaGTTCAAAGTCTACCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SWDFIPLYGNFLPVPYFLVIILI*FKVYPF Trigger: AAAGGGGTAGACTTTGAATCAGATGAGGATGATGAC...GAGGAAATAGGGCACAGGCAGAAAGTTACCATACAACGGGATGAAGTCCCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| CDS-3UTR GCA 90 bp | ATTACTGACAGAGCCATCAAGAAAATGAGTCCTGCCCAATGGGCACAGGATCTGTGGTATTTCTCTGTCTaGTTTCTCGGAAACGTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: ITDRAIKKMSPAQWAQDLWYFSV*FLGNVG Trigger: TCCGACGTTTCCGAGAAAGCAGACAGAGAAATACCA...CAGATCCTGTGCCCATTGGGCAGGACTCATTTTCTTGATGGCTCTGTCAGTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR GCA 90 bp | GATTTTATCAGAGTGACTGAACACACTTGCCTTATAAAATTAAGACCAGCAGAACTAGGTGCCGAGCTCTaGCCTCTGGCTCCTCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: DFIRVTEHTCLIKLRPAELGAEL*PLAPLR Trigger: GCGAAGAGGAGCCAGAGGGCAGAGCTCGGCACCTAG...TTCTGCTGGTCTTAATTTTATAAGGCAAGTGTGTTCAGTCACTCTGATAAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| CDS-3UTR CCA 90 bp | ATCCACTCAGAGATGTTTACAGCAACTGAAGCCAGTGTGCTGCTGGTGGAGGAGTCATCATGGTTGCCGTaGATACTAAATACTGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: IHSEMFTATEASVLLVEESSWLP*ILNTGM Trigger: CATTCCAGTATTTAGTATCCACGGCAACCATGATGA...CTCCTCCACCAGCAGCACACTGGCTTCAGTTGCTGTAAACATCTCTGAGTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR CCA 90 bp | AATATAAGTGTGCTGTTTCGGTCAGTTCTGGGATCATCCACTCAGAGATGTTTACCCGGGCTCTGCTCATaGCCTCTCGAACTTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: NISVLFRSVLGSSTQRCLPGLCS*PLELHH Trigger: ATGATGAAGTTCGAGAGGCCATGAGCAGAGCCCGGG...TAAACATCTCTGAGTGGATGATCCCAGAACTGACCGAAACAGCACACTTATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR GCA 90 bp | TTTCGGTCAGTTCTGGGATCATCCACTCAGAGATGTTTACAGCAACTGAAGCCAACAGAGCGAGTTTTGTaGTTCCTTTCTGCAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FRSVLGSSTQRCLQQLKPTERVL*FLSAAE Trigger: TTCTGCTGCAGAAAGGAAGCACAAAACTCGCTCTGT...TGGCTTCAGTTGCTGTAAACATCTCTGAGTGGATGATCCCAGAACTGACCGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| 3UTR CAA 72 bp | TCATTAGCACTGAATTATAGTTCTAACTTAAACCACTaGGTGATTGGTGGTACCGTCAGGTGCTGGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLALNYSSNLNH*VIGGTVRCWAS Trigger: TGAAGCCCAGCACCTGACGGTACCACCAATCACCAAGTGGTTTAAGTTAGAACTATAATTCAGTGCTAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| CDS-3UTR CCA 90 bp | CAATCTCCTTATCATTGGGCTAGGAAATGGCTTAAGGGAGTCACCGTTCAGAAAATCCAAAAACTGCTCTaGAATGAAGTTGGTGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QSPYHWARKWLKGVTVQKIQKLL*NEVGVS Trigger: GGAAACACCAACTTCATTCCAGAGCAGTTTTTGGAT...TTTCTGAACGGTGACTCCCTTAAGCCATTTCCTAGCCCAATGATAAGGAGATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR CCA 90 bp | CAATCTCCTTATCATTGGGCTAGGAAATGGCTTAAGGGAGTCACCGTTCAGAAATTCTTCTCTGCAGTTTaGAAATACTGCTTTACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSPYHWARKWLKGVTVQKFFSAV*KYCFTR Trigger: CCTCGTAAAGCAGTATTTCCAAACTGCAGAGAAGAA...TTTCTGAACGGTGACTCCCTTAAGCCATTTCCTAGCCCAATGATAAGGAGATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR TCA 90 bp | GACAAGTATACGAGAAAGAAAAAGAGCTTGTCATTACTGACAGAGCCATCAAGACTGGAATGGAAATGTTaGGATTGCCATCCTGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: DKYTRKKKSLSLLTEPSRLEWKC*DCHPGS Trigger: ACTACCAGGATGGCAATCTCAACATTTCCATTCCAG...TCTTGATGGCTCTGTCAGTAATGACAAGCTCTTTTTCTTTCTCGTATACTTGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR TCA 90 bp | AATATAAGTGTGCTGTTTCGGTCAGTTCTGGGATCATCCACTCAGAGATGTTTAGCTGCTGCTCATTTTTaGTTGGGCCAATTTTACACT | + |
|
Preference number: 4 (lower is better) Translates to: NISVLFRSVLGSSTQRCLAAAHF*LGQFYT Trigger: AGTGTAAAATTGGCCCAATCAAAAATGAGCAGCAGC...TAAACATCTCTGAGTGGATGATCCCAGAACTGACCGAAACAGCACACTTATATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR TCA 90 bp | AATATAAGTGTGCTGTTTCGGTCAGTTCTGGGATCATCCACTCAGAGATGTTTAGTCATCATCCTCATCTaGTTCAAAGTCTACCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NISVLFRSVLGSSTQRCLVIILI*FKVYPF Trigger: AAAGGGGTAGACTTTGAATCAGATGAGGATGATGAC...TAAACATCTCTGAGTGGATGATCCCAGAACTGACCGAAACAGCACACTTATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR GCA 90 bp | ATTAGCCTTTTCTTCCTGACAAGTATACGAGAAAGAAAAAGAGCTTGTCATTACCGGAGAGGCAGCTTCTaGATGTTCATCTTTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISLFFLTSIRERKRACHYRRGSF*MFIFLP Trigger: AGGGAGAAAGATGAACATGCAGAAGCTGCCTCTCCG...GTAATGACAAGCTCTTTTTCTTTCTCGTATACTTGTCAGGAAGAAAAGGCTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR TCA 90 bp | ATTAGCCTTTTCTTCCTGACAAGTATACGAGAAAGAAAAAGAGCTTGTCATTACAAGCGTTGCTCCTTCTaGAGCAGGTTTTGTGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: ISLFFLTSIRERKRACHYKRCSF*SRFCDE Trigger: CTCATCACAAAACCTGCTTCAGAAGGAGCAACGCTT...GTAATGACAAGCTCTTTTTCTTTCTCGTATACTTGTCAGGAAGAAAAGGCTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR TCA 90 bp | ATTAGCCTTTTCTTCCTGACAAGTATACGAGAAAGAAAAAGAGCTTGTCATTACCTGGAATGGAAATGTTaGGATTGCCATCCTGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: ISLFFLTSIRERKRACHYLEWKC*DCHPGS Trigger: ACTACCAGGATGGCAATCTCAACATTTCCATTCCAG...GTAATGACAAGCTCTTTTTCTTTCTCGTATACTTGTCAGGAAGAAAAGGCTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| 3UTR CAA 72 bp | CAATGTCAGATCTGTCTAAACAAACCCCAGAGAACTTaGTGGTACACTGATTACACAATGACCTTCAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: QCQICLNKPQRT*WYTDYTMTFNQ Trigger: TTGATTGAAGGTCATTGTGTAATCAGTGTACCACAAAGTTCTCTGGGGTTTGTTTAGACAGATCTGACATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
||
| CDS-3UTR TCA 90 bp | ATTAGCCTTTTCTTCCTGACAAGTATACGAGAAAGAAAAAGAGCTTGTCATTACAAAACTGCTCTGGAATaGAGTTGGTGTTTCCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: ISLFFLTSIRERKRACHYKTALE*SWCFHA Trigger: AGCATGGAAACACCAACTTCATTCCAGAGCAGTTTT...GTAATGACAAGCTCTTTTTCTTTCTCGTATACTTGTCAGGAAGAAAAGGCTAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR CCA 90 bp | ATTAGCCTTTTCTTCCTGACAAGTATACGAGAAAGAAAAAGAGCTTGTCATTACCTGTGCCTGAAAAAGTaGATGACATCTTTTGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: ISLFFLTSIRERKRACHYLCLKK*MTSFGL Trigger: TAACCCAAAAGATGTCATCCACTTTTTCAGGCACAG...GTAATGACAAGCTCTTTTTCTTTCTCGTATACTTGTCAGGAAGAAAAGGCTAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR CAA 90 bp | CTGAAGCCAGTGTGCTGCTGGTGGAGGAGGTCCGGCACCAACACCGGCAGAAGCTGTGCCCGACCACCTTaGATCAGCCCTGGAATTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LKPVCCWWRRSGTNTGRSCARPP*ISPGIG Trigger: ACCAATTCCAGGGCTGATCAAAGGTGGTCGGGCACA...GCTTCTGCCGGTGTTGGTGCCGGACCTCCTCCACCAGCAGCACACTGGCTTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR CAA 90 bp | CTGAAGCCAGTGTGCTGCTGGTGGAGGAGGTCCGGCACCAACACCGGCAGAAGCACCTCCTCATCAATCTaGTCTTCCAGAGCATCAATA | + |
|
Preference number: 5 (lower is better) Translates to: LKPVCCWWRRSGTNTGRSTSSSI*SSRASI Trigger: TATTGATGCTCTGGAAGACAAGATTGATGAGGAGGT...GCTTCTGCCGGTGTTGGTGCCGGACCTCCTCCACCAGCAGCACACTGGCTTCAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS CCA 90 bp | ATGGCCTGGGTCACCTTAGGATTGTCAGGGTTGAACAGGTTTGGGTaGTTAGCCAGAACCACGTCTTCTATGAAGAACCGCCGCACGGTG | + |
|
Preference number: 5 (lower is better) Translates to: MAWVTLGLSGLNRFG*LARTTSSMKNRRTV Trigger: CACCGTGCGGCGGTTCTTCATAGAAGACGTGGTTCTGGCTAACCACCCAAACCTGTTCAACCCTGACAATCCTAAGGTGACCCAGGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 ENSMUST00000147676.8 |
||
| CDS CCA 90 bp | CTGGATGGCCTGGGTCACCTTAGGATTGTCAGGGTTGAACAGGTTTaGGTGGTTAGCCAGAACCACGTCTTCTATGAAGAACCGCCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LDGLGHLRIVRVEQV*VVSQNHVFYEEPPH Trigger: GTGCGGCGGTTCTTCATAGAAGACGTGGTTCTGGCTAACCACCCAAACCTGTTCAACCCTGACAATCCTAAGGTGACCCAGGCCATCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 ENSMUST00000147676.8 |
||
| CDS-3UTR CAA 90 bp | TGTGCTGCTGGTGGAGGAGGTCCGGCACCAACACCGGCAGAAGCTGTACTGCTGATGAGCATCCCAAAGTaGATCTCTTCTCCTGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: CAAGGGGPAPTPAEAVLLMSIPK*ISSPVF Trigger: AAAAACAGGAGAAGAGATCAACTTTGGGATGCTCAT...CAGCAGTACAGCTTCTGCCGGTGTTGGTGCCGGACCTCCTCCACCAGCAGCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
||
| CDS-3UTR CAA 90 bp | GAGATGTTTACAGCAACTGAAGCCAGTGTGCTGCTGGTGGAGGAGGTCCGGCACTGCTCTGGAATGAAGTaGGTGTTTCCATGCTTACTC | + |
|
Preference number: 5 (lower is better) Translates to: EMFTATEASVLLVEEVRHCSGMK*VFPCLL Trigger: GAGTAAGCATGGAAACACCAACTTCATTCCAGAGCA...GTGCCGGACCTCCTCCACCAGCAGCACACTGGCTTCAGTTGCTGTAAACATCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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| CDS-3UTR CAA 90 bp | AAGACCCTTCTGGTCCTAGTAGACGGTCCTCTAGCAAGCTCTGATATCCACACTTCAAAGTCTACCCCTTaGGCTGTCTGGCTCTGGGAC | + |
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Preference number: 5 (lower is better) Translates to: KTLLVLVDGPLASSDIHTSKSTP*AVWLWD Trigger: GTCCCAGAGCCAGACAGCCAAAGGGGTAGACTTTGA...AGTGTGGATATCAGAGCTTGCTAGAGGACCGTCTACTAGGACCAGAAGGGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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| CDS TCA 90 bp | TGGGCAACTACTGCTCATGAAAGGGTCATCGTCATCATCCTCATCTaGTTCAAAGTCTACCCCTTTGGCTGTCTGGCTCTGGGACATCCG | + |
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Preference number: 5 (lower is better) Translates to: WATTAHERVIVIILI*FKVYPFGCLALGHP Trigger: CGGATGTCCCAGAGCCAGACAGCCAAAGGGGTAGACTTTGAATCAGATGAGGATGATGACGATGACCCTTTCATGAGCAGTAGTTGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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| CDS-3UTR CAA 90 bp | ATCCACTCAGAGATGTTTACAGCAACTGAAGCCAGTGTGCTGCTGGTGGAGGAGCGTACAGAGCGAGTTTaGTGCTTCCTTTCTGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: IHSEMFTATEASVLLVEERTERV*CFLSAA Trigger: TGCTGCAGAAAGGAAGCACAAAACTCGCTCTGTACG...CTCCTCCACCAGCAGCACACTGGCTTCAGTTGCTGTAAACATCTCTGAGTGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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| CDS-3UTR CAA 90 bp | TCCTGGGACTTCATCCCGTTGTATGGTAACTTTCTGCCTGTGCCCTATTTCCTCCGTACAGAGCGAGTTTaGTGCTTCCTTTCTGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: SWDFIPLYGNFLPVPYFLRTERV*CFLSAA Trigger: TGCTGCAGAAAGGAAGCACAAAACTCGCTCTGTACG...GAGGAAATAGGGCACAGGCAGAAAGTTACCATACAACGGGATGAAGTCCCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| CDS CCA 90 bp | AAACGTCGGACCTCCTCATCAATCTTGTCTTCCAGAGCATCAATATaGCGCTCCTTAAGAAACCGCTGTGTTTTCTCCAGCTGGTACTTC | + |
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Preference number: 5 (lower is better) Translates to: KRRTSSSILSSRASI*RSLRNRCVFSSWYF Trigger: GAAGTACCAGCTGGAGAAAACACAGCGGTTTCTTAAGGAGCGCCATATTGATGCTCTGGAAGACAAGATTGATGAGGAGGTCCGACGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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| CDS GCA 90 bp | TGGCCTCTCGAACTTCATCATCTTCTTCGTTGGTATTTCTCTGTCTaGTTTCTCGGAAACGTCGGACCTCCTCATCAATCTTGTCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: WPLELHHLLRWYFSV*FLGNVGPPHQSCLP Trigger: TGGAAGACAAGATTGATGAGGAGGTCCGACGTTTCCGAGAAAGCAGACAGAGAAATACCAACGAAGAAGATGATGAAGTTCGAGAGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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| CDS-3UTR CAA 90 bp | GACTTTAGTGACCAACCTCACTGTCACTCACCTAGGATCATCTCACTGGCACACATGAGCATCCCAAAGTaGATCTCTTCTCCTGTTTTT | + |
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Preference number: 5 (lower is better) Translates to: DFSDQPHCHSPRIISLAHMSIPK*ISSPVF Trigger: AAAAACAGGAGAAGAGATCAACTTTGGGATGCTCAT...GTGTGCCAGTGAGATGATCCTAGGTGAGTGACAGTGAGGTTGGTCACTAAAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| CDS-3UTR CAA 90 bp | TTAGTGACCAACCTCACTGTCACTCACCTAGGATCATCTCACTGGCACACAGACATTCTTCTCTGCAGTTaGGAAATACTGCTTTACGAG | + |
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Preference number: 5 (lower is better) Translates to: LVTNLTVTHLGSSHWHTDILLCS*EILLYE Trigger: CTCGTAAAGCAGTATTTCCAAACTGCAGAGAAGAAT...GTCTGTGTGCCAGTGAGATGATCCTAGGTGAGTGACAGTGAGGTTGGTCACTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| CDS-3UTR CAA 90 bp | GACAAGTATACGAGAAAGAAAAAGAGCTTGTCATTACTGACAGAGCCATCAAGATGTGCCCGACCACCTTaGATCAGCCCTGGAATTGGT | + |
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Preference number: 5 (lower is better) Translates to: DKYTRKKKSLSLLTEPSRCARPP*ISPGIG Trigger: ACCAATTCCAGGGCTGATCAAAGGTGGTCGGGCACA...TCTTGATGGCTCTGTCAGTAATGACAAGCTCTTTTTCTTTCTCGTATACTTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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| CDS-3UTR CAA 90 bp | CAATCTCCTTATCATTGGGCTAGGAAATGGCTTAAGGGAGTCACCGTTCAGAAATGCTCTGGAATGAAGTaGGTGTTTCCATGCTTACTC | + |
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Preference number: 5 (lower is better) Translates to: QSPYHWARKWLKGVTVQKCSGMK*VFPCLL Trigger: GAGTAAGCATGGAAACACCAACTTCATTCCAGAGCA...TTTCTGAACGGTGACTCCCTTAAGCCATTTCCTAGCCCAATGATAAGGAGATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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| CDS-3UTR CAA 90 bp | TTTCGGTCAGTTCTGGGATCATCCACTCAGAGATGTTTACAGCAACTGAAGCCAACCTCCTCATCAATCTaGTCTTCCAGAGCATCAATA | + |
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Preference number: 5 (lower is better) Translates to: FRSVLGSSTQRCLQQLKPTSSSI*SSRASI Trigger: TATTGATGCTCTGGAAGACAAGATTGATGAGGAGGT...TGGCTTCAGTTGCTGTAAACATCTCTGAGTGGATGATCCCAGAACTGACCGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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| CDS-3UTR CAA 90 bp | ATTAGCCTTTTCTTCCTGACAAGTATACGAGAAAGAAAAAGAGCTTGTCATTACTCAAAGTCTACCCCTTaGGCTGTCTGGCTCTGGGAC | + |
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Preference number: 5 (lower is better) Translates to: ISLFFLTSIRERKRACHYSKSTP*AVWLWD Trigger: GTCCCAGAGCCAGACAGCCAAAGGGGTAGACTTTGA...GTAATGACAAGCTCTTTTTCTTTCTCGTATACTTGTCAGGAAGAAAAGGCTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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| CDS-3UTR CAA 90 bp | AATATAAGTGTGCTGTTTCGGTCAGTTCTGGGATCATCCACTCAGAGATGTTTAAGCTGCTGCTCATTTTaGATTGGGCCAATTTTACAC | + |
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Preference number: 5 (lower is better) Translates to: NISVLFRSVLGSSTQRCLSCCSF*IGPILH Trigger: GTGTAAAATTGGCCCAATCAAAAATGAGCAGCAGCT...TAAACATCTCTGAGTGGATGATCCCAGAACTGACCGAAACAGCACACTTATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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| CDS-3UTR CAA 90 bp | ATTAGCCTTTTCTTCCTGACAAGTATACGAGAAAGAAAAAGAGCTTGTCATTACATTCTTCTCTGCAGTTaGGAAATACTGCTTTACGAG | + |
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Preference number: 5 (lower is better) Translates to: ISLFFLTSIRERKRACHYILLCS*EILLYE Trigger: CTCGTAAAGCAGTATTTCCAAACTGCAGAGAAGAAT...GTAATGACAAGCTCTTTTTCTTTCTCGTATACTTGTCAGGAAGAAAAGGCTAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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| CDS TCA 72 bp | CGAGTAGTGATCTCCAGCCCAGTGTCTCGGCCTCTCTaGGAGCCTCCTCTAGGTGCCGAGCTCTGCCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: RVVISSPVSRPL*EPPLGAELCPL Trigger: CAGAGGGCAGAGCTCGGCACCTAGAGGAGGCTCTCAGAGAGGCCGAGACACTGGGCTGGAGATCACTACTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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| CDS CAA 72 bp | CTCTGGATGGCCTGGGTCACCTTAGGATTGTCAGGGTaGAACAGGTTTGGGTGGTTAGCCAGAACCACGTCT | + |
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Preference number: 6 (lower is better) Translates to: LWMAWVTLGLSG*NRFGWLARTTS Trigger: AGACGTGGTTCTGGCTAACCACCCAAACCTGTTCAACCCTGACAATCCTAAGGTGACCCAGGCCATCCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 ENSMUST00000147676.8 |
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| CDS CAA 90 bp | ACCTTCTCCAGACAGAAGCTCTGGATGGCCTGGGTCACCTTAGGATaGTCAGGGTTGAACAGGTTTGGGTGGTTAGCCAGAACCACGTCT | + |
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Preference number: 6 (lower is better) Translates to: TFSRQKLWMAWVTLG*SGLNRFGWLARTTS Trigger: AGACGTGGTTCTGGCTAACCACCCAAACCTGTTCAACCCTGACAATCCTAAGGTGACCCAGGCCATCCAGAGCTTCTGTCTGGAGAAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115632.10 |
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| CDS CCA 72 bp | TCTGATTCAAAGTCTACCCCTTTGGCTGTCTGGCTCTaGGACATCCGTTTGCTAGATGTTGTGCCCGACCAC | + |
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Preference number: 6 (lower is better) Translates to: SDSKSTPLAVWL*DIRLLDVVPDH Trigger: GTGGTCGGGCACAACATCTAGCAAACGGATGTCCCAGAGCCAGACAGCCAAAGGGGTAGACTTTGAATCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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| CDS CAA 72 bp | AGACAGAAGCTCTGGATGGCCTGGGTCACCTTAGGATaGTCAGGGTTGAACAGGTTTGGGTGGTTAGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: RQKLWMAWVTLG*SGLNRFGWLAR Trigger: TCTGGCTAACCACCCAAACCTGTTCAACCCTGACAATCCTAAGGTGACCCAGGCCATCCAGAGCTTCTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 ENSMUST00000147676.8 |
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| CDS CAA 90 bp | AGACAGAAGCTCTGGATGGCCTGGGTCACCTTAGGATTGTCAGGGTaGAACAGGTTTGGGTGGTTAGCCAGAACCACGTCTTCTATGAAG | + |
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Preference number: 6 (lower is better) Translates to: RQKLWMAWVTLGLSG*NRFGWLARTTSSMK Trigger: CTTCATAGAAGACGTGGTTCTGGCTAACCACCCAAACCTGTTCAACCCTGACAATCCTAAGGTGACCCAGGCCATCCAGAGCTTCTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 ENSMUST00000147676.8 |
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| CDS CAA 72 bp | GCACAGAGGGCATCTGCCCCCGTGGGATCATCATGGTaGCCGTGGATACTAAATACTGGAATGGAAATGTTG | + |
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Preference number: 6 (lower is better) Translates to: AQRASAPVGSSW*PWILNTGMEML Trigger: CAACATTTCCATTCCAGTATTTAGTATCCACGGCAACCATGATGATCCCACGGGGGCAGATGCCCTCTGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 ENSMUST00000147305.2 |
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| CDS GCA 72 bp | CCCATACAGTACTTCCTAAGCAGCTCCAAGCAGCTGTaGAGGGTTTTCCTCGAGGGCTTGTTTTCATGGAAA | + |
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Preference number: 6 (lower is better) Translates to: PIQYFLSSSKQL*RVFLEGLFSWK Trigger: TTTCCATGAAAACAAGCCCTCGAGGAAAACCCTGCACAGCTGCTTGGAGCTGCTTAGGAAGTACTGTATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 ENSMUST00000147305.2 |
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| CDS CCA 72 bp | GTCACCTTAGGATTGTCAGGGTTGAACAGGTTTGGGTaGTTAGCCAGAACCACGTCTTCTATGAAGAACCGC | + |
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Preference number: 6 (lower is better) Translates to: VTLGLSGLNRFG*LARTTSSMKNR Trigger: GCGGTTCTTCATAGAAGACGTGGTTCTGGCTAACCACCCAAACCTGTTCAACCCTGACAATCCTAAGGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 ENSMUST00000147676.8 |
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| CDS TCA 72 bp | ACTGCTCATGAAAGGGTCATCGTCATCATCCTCATCTaGTTCAAAGTCTACCCCTTTGGCTGTCTGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: TAHERVIVIILI*FKVYPFGCLAL Trigger: CAGAGCCAGACAGCCAAAGGGGTAGACTTTGAATCAGATGAGGATGATGACGATGACCCTTTCATGAGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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| CDS CCA 72 bp | CTGGGTCACCTTAGGATTGTCAGGGTTGAACAGGTTTaGGTGGTTAGCCAGAACCACGTCTTCTATGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: LGHLRIVRVEQV*VVSQNHVFYEE Trigger: TTCTTCATAGAAGACGTGGTTCTGGCTAACCACCCAAACCTGTTCAACCCTGACAATCCTAAGGTGACCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 ENSMUST00000147676.8 |
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| CDS CCA 72 bp | TCAAGCATTTCTTCAATCTTCTCCAGACAGAAGCTCTaGATGGCCTGGGTCACCTTAGGATTGTCAGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: SSISSIFSRQKL*MAWVTLGLSGL Trigger: CAACCCTGACAATCCTAAGGTGACCCAGGCCATCCAGAGCTTCTGTCTGGAGAAGATTGAAGAAATGCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000147676.8 |
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| CDS TCA 72 bp | ATGTCAACCTTCTCCACCGACATTGACCGTCCAAAGTaGTTCACAAACCCAGCACAGCTTAAAACATCCAGG | + |
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Preference number: 6 (lower is better) Translates to: MSTFSTDIDRPK*FTNPAQLKTSR Trigger: CCTGGATGTTTTAAGCTGTGCTGGGTTTGTGAATCACTTTGGACGGTCAATGTCGGTGGAGAAGGTTGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 ENSMUST00000147305.2 |
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| CDS CCA 72 bp | ACCTCCTCATCAATCTTGTCTTCCAGAGCATCAATATaGCGCTCCTTAAGAAACCGCTGTGTTTTCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: TSSSILSSRASI*RSLRNRCVFSS Trigger: GCTGGAGAAAACACAGCGGTTTCTTAAGGAGCGCCATATTGATGCTCTGGAAGACAAGATTGATGAGGAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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| CDS CCA 72 bp | TGCTCATGGCCTCTCGAACTTCATCATCTTCTTCGTTaGTATTTCTCTGTCTGCTTTCTCGGAAACGTCGGA | + |
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Preference number: 6 (lower is better) Translates to: CSWPLELHHLLR*YFSVCFLGNVG Trigger: TCCGACGTTTCCGAGAAAGCAGACAGAGAAATACCAACGAAGAAGATGATGAAGTTCGAGAGGCCATGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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| CDS GCA 72 bp | GAACTTCATCATCTTCTTCGTTGGTATTTCTCTGTCTaGTTTCTCGGAAACGTCGGACCTCCTCATCAATCT | + |
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Preference number: 6 (lower is better) Translates to: ELHHLLRWYFSV*FLGNVGPPHQS Trigger: AGATTGATGAGGAGGTCCGACGTTTCCGAGAAAGCAGACAGAGAAATACCAACGAAGAAGATGATGAAGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034405.11 ENSMUST00000115632.10 |
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