RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MRC1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026712

Ensembl transcript IDs: ENSMUST00000028045.4

Found 245 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATAGTCACCTTCCTAATATACATACAACAGAACACAGAACACATTTaGAATATTCAGCCTGTCAAACCTTGCCTGGGACAAACAAGATTC +
Preference number: 1 (lower is better)
Translates to: IVTFLIYIQQNTEHI*NIQPVKPCLGQTRF
Trigger: GAATCTTGTTTGTCCCAGGCAAGGTTTGACAGGCTGAATATTGCAAATGTGTTCTGTGTTCTGTTGTATGTATATTAGGAAGGTGACTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
3UTR-3UTR TCA 90 bp ACAGAACACAGAACACATTTGCAATATTCAGCCTGTCAAACCTTGCCTGGGACAGTCCTGAAAATACCCTaGGTGGCTTACGTGGTTGTT +
Preference number: 2 (lower is better)
Translates to: TEHRTHLQYSACQTLPGTVLKIP*VAYVVV
Trigger: AACAACCACGTAAGCCACTCAGGGTATTTTCAGGAC...TGTCCCAGGCAAGGTTTGACAGGCTGAATATTGCAAATGTGTTCTGTGTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
3UTR-3UTR CCA 90 bp ACAGAACACAGAACACATTTGCAATATTCAGCCTGTCAAACCTTGCCTGGGACACATTCTTATTCAATCTaGGGTTATGTGGACTTGTCT +
Preference number: 2 (lower is better)
Translates to: TEHRTHLQYSACQTLPGTHSYSI*GYVDLS
Trigger: AGACAAGTCCACATAACCCCAGATTGAATAAGAATG...TGTCCCAGGCAAGGTTTGACAGGCTGAATATTGCAAATGTGTTCTGTGTTCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
3UTR CAA 90 bp CATAGTCACCTTCCTAATATACATACAACAGAACACAGAACACATTaGCAATATTCAGCCTGTCAAACCTTGCCTGGGACAAACAAGATT +
Preference number: 2 (lower is better)
Translates to: HSHLPNIHTTEHRTH*QYSACQTLPGTNKI
Trigger: AATCTTGTTTGTCCCAGGCAAGGTTTGACAGGCTGAATATTGCAAATGTGTTCTGTGTTCTGTTGTATGTATATTAGGAAGGTGACTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
3UTR GCA 72 bp GTGGCTTACGTGGTTGTTTCTAGAACTCTTGAAATCTaGAGGGTTGACATGAGACCTACCACCAGTGTAGCA +
Preference number: 3 (lower is better)
Translates to: VAYVVVSRTLEI*RVDMRPTTSVA
Trigger: TGCTACACTGGTGGTAGGTCTCATGTCAACCCTGCAGATTTCAAGAGTTCTAGAAACAACCACGTAAGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
3UTR GCA 72 bp TTCCTAATATACATACAACAGAACACAGAACACATTTaGAATATTCAGCCTGTCAAACCTTGCCTGGGACAA +
Preference number: 3 (lower is better)
Translates to: FLIYIQQNTEHI*NIQPVKPCLGQ
Trigger: TTGTCCCAGGCAAGGTTTGACAGGCTGAATATTGCAAATGTGTTCTGTGTTCTGTTGTATGTATATTAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
3UTR TCA 72 bp ATACAGTTCTCAATAACTGACATGAATCAGGACTGCTaGAAAAGACCTGAATACATTCTTATTCAATCTGGG +
Preference number: 3 (lower is better)
Translates to: IQFSITDMNQDC*KRPEYILIQSG
Trigger: CCCAGATTGAATAAGAATGTATTCAGGTCTTTTTCAGCAGTCCTGATTCATGTCAGTTATTGAGAACTGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR TCA 90 bp ACTCTTGAAATCTGCAGGGTTGACATGAGACCTACCACCAGTGTAGCAGTGTTACACTTGCCAGGCAGTTaGGGAGGTTCAGTAGCAGGG +
Preference number: 4 (lower is better)
Translates to: TLEICRVDMRPTTSVAVLHLPGS*GGSVAG
Trigger: CCCTGCTACTGAACCTCCTCAACTGCCTGGCAAGTG...TAACACTGCTACACTGGTGGTAGGTCTCATGTCAACCCTGCAGATTTCAAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR GCA 90 bp ACAGAACACAGAACACATTTGCAATATTCAGCCTGTCAAACCTTGCCTGGGACACCGGCAGCCTTTGTCTaGACCCTCCGGTACTACAGC +
Preference number: 4 (lower is better)
Translates to: TEHRTHLQYSACQTLPGTPAAFV*TLRYYS
Trigger: GCTGTAGTACCGGAGGGTGCAGACAAAGGCTGCCGG...TGTCCCAGGCAAGGTTTGACAGGCTGAATATTGCAAATGTGTTCTGTGTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR GCA 90 bp ACTCTTGAAATCTGCAGGGTTGACATGAGACCTACCACCAGTGTAGCAGTGTTAAATGCCAACCTTCCTTaGAGCCACCTGGTGTCGTGG +
Preference number: 4 (lower is better)
Translates to: TLEICRVDMRPTTSVAVLNANLP*SHLVSW
Trigger: CCACGACACCAGGTGGCTGCAAGGAAGGTTGGCATT...TAACACTGCTACACTGGTGGTAGGTCTCATGTCAACCCTGCAGATTTCAAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR TCA 90 bp ACTCTTGAAATCTGCAGGGTTGACATGAGACCTACCACCAGTGTAGCAGTGTTAGCAACACTCATGATCTaGGAATCTGACACCCAGCGG +
Preference number: 4 (lower is better)
Translates to: TLEICRVDMRPTTSVAVLATLMI*ESDTQR
Trigger: CCGCTGGGTGTCAGATTCTCAGATCATGAGTGTTGC...TAACACTGCTACACTGGTGGTAGGTCTCATGTCAACCCTGCAGATTTCAAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CCA 90 bp ACAGAACACAGAACACATTTGCAATATTCAGCCTGTCAAACCTTGCCTGGGACAGTTCAGATACCGGAATaGGCTTCCTCCAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: TEHRTHLQYSACQTLPGTVQIPE*ASSSPL
Trigger: CAGTGGGCTGGAGGAAGCCCATTCCGGTATCTGAAC...TGTCCCAGGCAAGGTTTGACAGGCTGAATATTGCAAATGTGTTCTGTGTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR GCA 90 bp ACAGAACACAGAACACATTTGCAATATTCAGCCTGTCAAACCTTGCCTGGGACAAGGAGGTCAGCATTCTaGTGCTTGCAGCTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: TEHRTHLQYSACQTLPGTRRSAF*CLQLAL
Trigger: AAGGGCAAGCTGCAAGCAGCAGAATGCTGACCTCCT...TGTCCCAGGCAAGGTTTGACAGGCTGAATATTGCAAATGTGTTCTGTGTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR GCA 90 bp ACAGAACACAGAACACATTTGCAATATTCAGCCTGTCAAACCTTGCCTGGGACACACGGTGACCACTCCTaGTGCTTTAGAAGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: TEHRTHLQYSACQTLPGTHGDHS*CFRRAL
Trigger: AAGGGCTCTTCTAAAGCAGCAGGAGTGGTCACCGTG...TGTCCCAGGCAAGGTTTGACAGGCTGAATATTGCAAATGTGTTCTGTGTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CCA 90 bp ACTCTTGAAATCTGCAGGGTTGACATGAGACCTACCACCAGTGTAGCAGTGTTACCCATCTGCAGTAACTaGTGGATTGTCTTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: TLEICRVDMRPTTSVAVLPICSN*WIVLWS
Trigger: GCTCCACAAGACAATCCACCAGTTACTGCAGATGGG...TAACACTGCTACACTGGTGGTAGGTCTCATGTCAACCCTGCAGATTTCAAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR TCA 90 bp ACTCTTGAAATCTGCAGGGTTGACATGAGACCTACCACCAGTGTAGCAGTGTTACATGATCTGAGAATCTaGCACCCAGCGGAATTTCTG +
Preference number: 4 (lower is better)
Translates to: TLEICRVDMRPTTSVAVLHDLRI*HPAEFL
Trigger: CAGAAATTCCGCTGGGTGTCAGATTCTCAGATCATG...TAACACTGCTACACTGGTGGTAGGTCTCATGTCAACCCTGCAGATTTCAAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR TCA 90 bp GACGCTAGTGCTGTGTATTCATCAAAGGTATCTTCAAAAGTGGCAATCAACAATCCACGCAGTCTGTTCTaGCTCTGGACACTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: DASAVYSSKVSSKVAINNPRSLF*LWTLAR
Trigger: CCTGGCAAGTGTCCAGAGTCAGAACAGACTGCGTGG...ATTGTTGATTGCCACTTTTGAAGATACCTTTGATGAATACACAGCACTAGCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CCA 90 bp ACAGAACACAGAACACATTTGCAATATTCAGCCTGTCAAACCTTGCCTGGGACATGTCTGTTGTTCTCATaGCTTGGCTCTCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: TEHRTHLQYSACQTLPGTCLLFS*LGSPGS
Trigger: GCTTCCTGGAGAGCCAAGCCATGAGAACAACAGACA...TGTCCCAGGCAAGGTTTGACAGGCTGAATATTGCAAATGTGTTCTGTGTTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CCA 90 bp AGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGTGTTGTGGGCTCTGGTaGGCGAGTCACTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SNYCSIRRRKRTNQCNPVCCGLW*ASHSFC
Trigger: GCAGAAGGAGTGACTCGCCCACCAGAGCCCACAACA...CACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CCA 90 bp GACGCTAGTGCTGTGTATTCATCAAAGGTATCTTCAAAAGTGGCAATCAACAATTTCCTTGCAGCCACCTaGTGTCGTGGGTGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: DASAVYSSKVSSKVAINNFLAAT*CRGCGR
Trigger: CCTACCACACCCACGACACCAGGTGGCTGCAAGGAA...ATTGTTGATTGCCACTTTTGAAGATACCTTTGATGAATACACAGCACTAGCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CCA 90 bp GACGCTAGTGCTGTGTATTCATCAAAGGTATCTTCAAAAGTGGCAATCAACAATCAGCAGCAGTCTCGATaGAAACCAGGGAGGCACCCA +
Preference number: 4 (lower is better)
Translates to: DASAVYSSKVSSKVAINNQQQSR*KPGRHP
Trigger: TGGGTGCCTCCCTGGTTTCCATCGAGACTGCTGCTG...ATTGTTGATTGCCACTTTTGAAGATACCTTTGATGAATACACAGCACTAGCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR TCA 90 bp ACTCTTGAAATCTGCAGGGTTGACATGAGACCTACCACCAGTGTAGCAGTGTTAAACGTCCCTTTGTTTTaGACATCTGAGAGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: TLEICRVDMRPTTSVAVLNVPLF*TSESPV
Trigger: GACAGGACTCTCAGATGTTCAAAACAAAGGGACGTT...TAACACTGCTACACTGGTGGTAGGTCTCATGTCAACCCTGCAGATTTCAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR GCA 90 bp ACTCTTGAAATCTGCAGGGTTGACATGAGACCTACCACCAGTGTAGCAGTGTTAGGCAGAGGTGCAGTCTaGATACCACTTGTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: TLEICRVDMRPTTSVAVLGRGAV*IPLVFK
Trigger: TTTGAAAACAAGTGGTATGCAGACTGCACCTCTGCC...TAACACTGCTACACTGGTGGTAGGTCTCATGTCAACCCTGCAGATTTCAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR GCA 90 bp AGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGCCTGTAGCAGTGGCCTaGATAGGGCCACCACTGATT +
Preference number: 4 (lower is better)
Translates to: SNYCSIRRRKRTNQCNPVPVAVA*IGPPLI
Trigger: AATCAGTGGTGGCCCTATGCAGGCCACTGCTACAGG...CACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR TCA 90 bp ATCAGGACTGCTGAAAAAGACCTGAATACATTCTTATTCAATCTGGGGTTATGTCAGCTTGCCCTTGCCTaGTGCCAGGTTAAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: IRTAEKDLNTFLFNLGLCQLALA*CQVKAD
Trigger: GTCTGCTTTAACCTGGCATCAGGCAAGGGCAAGCTG...ACATAACCCCAGATTGAATAAGAATGTATTCAGGTCTTTTTCAGCAGTCCTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR GCA 90 bp ACTCTTGAAATCTGCAGGGTTGACATGAGACCTACCACCAGTGTAGCAGTGTTACACCAAAATTCTTCTTaGAAAATGCTCGCGCGTTGT +
Preference number: 4 (lower is better)
Translates to: TLEICRVDMRPTTSVAVLHQNSS*KMLARC
Trigger: ACAACGCGCGAGCATTTTGCAAGAAGAATTTTGGTG...TAACACTGCTACACTGGTGGTAGGTCTCATGTCAACCCTGCAGATTTCAAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CCA 90 bp ATGAGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCATGGTGGATTGTCTTGTaGAGCAGGTGTGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: MSNYCSIRRRKRTNQCNPWWIVL*SRCGLR
Trigger: CCTGAGCCCACACCTGCTCCACAAGACAATCCACCA...TGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR TCA 90 bp ATGAGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCACTCGCGTCCAATAGCTaGACAGAGACAGGGATGACA +
Preference number: 4 (lower is better)
Translates to: MSNYCSIRRRKRTNQCNPLASNS*TETGMT
Trigger: TGTCATCCCTGTCTCTGTTCAGCTATTGGACGCGAG...TGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR TCA 90 bp ATGAGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTACACTCAGACTGTTaGGTCCAATCCAGAGTCCCG +
Preference number: 4 (lower is better)
Translates to: MSNYCSIRRRKRTNQCNPVHSDC*VQSRVP
Trigger: CGGGACTCTGGATTGGACTCAACAGTCTGAGTGTAC...TGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR TCA 90 bp ACTCTTGAAATCTGCAGGGTTGACATGAGACCTACCACCAGTGTAGCAGTGTTATTTGGTTGTAATGGATaGGTGTGTAGTTACAGGATC +
Preference number: 4 (lower is better)
Translates to: TLEICRVDMRPTTSVAVLFGCNG*VCSYRI
Trigger: GATCCTGTAACTACACACTCATCCATTACAACCAAA...TAACACTGCTACACTGGTGGTAGGTCTCATGTCAACCCTGCAGATTTCAAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR TCA 90 bp ATGAGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGAAGAGCCCTTGGGTTaGGGATCCATCTTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: MSNYCSIRRRKRTNQCNPEEPLG*GSIFLW
Trigger: CCAAAGGAAGATGGATCCTCAACCCAAGGGCTCTTC...TGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR GCA 90 bp ACAGAACACAGAACACATTTGCAATATTCAGCCTGTCAAACCTTGCCTGGGACAAAACTTGAATGGAAATaGACAGACGGCTCCATTTGC +
Preference number: 4 (lower is better)
Translates to: TEHRTHLQYSACQTLPGTKLEWK*TDGSIC
Trigger: GCAAATGGAGCCGTCTGTGCATTTCCATTCAAGTTT...TGTCCCAGGCAAGGTTTGACAGGCTGAATATTGCAAATGTGTTCTGTGTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR GCA 90 bp AATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGCTAAATGCTGTGGATACTTaGCAGGTCCCCACCCTCCTT +
Preference number: 4 (lower is better)
Translates to: NYCSIRRRKRTNQCNPVLNAVDT*QVPTLL
Trigger: AAGGAGGGTGGGGACCTGGCAAGTATCCACAGCATT...TAGCACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR GCA 90 bp ATGAGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCATGTGTAAACTGCACCTaGTCGTCCACAGTCCACCGA +
Preference number: 4 (lower is better)
Translates to: MSNYCSIRRRKRTNQCNPCVNCT*SSTVHR
Trigger: TCGGTGGACTGTGGACGAGCAGGTGCAGTTTACACA...TGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR GCA 90 bp ACTCTTGAAATCTGCAGGGTTGACATGAGACCTACCACCAGTGTAGCAGTGTTAAAATGCTTGCTCTTGTaGATTTTCTATGGACACCAG +
Preference number: 4 (lower is better)
Translates to: TLEICRVDMRPTTSVAVLKCLLL*IFYGHQ
Trigger: CTGGTGTCCATAGAAAATGCACAAGAGCAAGCATTT...TAACACTGCTACACTGGTGGTAGGTCTCATGTCAACCCTGCAGATTTCAAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CCA 90 bp ATGAGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCACTTTGTCGTAGTCAGTaGTGGTTCCACACCAGAGCC +
Preference number: 4 (lower is better)
Translates to: MSNYCSIRRRKRTNQCNPLCRSQ*WFHTRA
Trigger: GGCTCTGGTGTGGAACCACCACTGACTACGACAAAG...TGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CCA 90 bp GACGCTAGTGCTGTGTATTCATCAAAGGTATCTTCAAAAGTGGCAATCAACAATAACTCCTCAATGCTGTaGATACTTGCCAGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: DASAVYSSKVSSKVAINNNSSML*ILARSP
Trigger: TGGGGACCTGGCAAGTATCCACAGCATTGAGGAGTT...ATTGTTGATTGCCACTTTTGAAGATACCTTTGATGAATACACAGCACTAGCGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CCA 90 bp AATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGCTACCACTCCGGTTTTCATaGCAACACATCCCGCCTTTC +
Preference number: 4 (lower is better)
Translates to: NYCSIRRRKRTNQCNPVLPLRFS*QHIPPF
Trigger: GAAAGGCGGGATGTGTTGCCATGAAAACCGGAGTGG...TAGCACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR TCA 90 bp AGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGAGGCACATCGCTTGCTaGGGGAATGATAAATGGGTT +
Preference number: 4 (lower is better)
Translates to: SNYCSIRRRKRTNQCNPVRHIAC*GNDKWV
Trigger: AACCCATTTATCATTCCCTCAGCAAGCGATGTGCCT...CACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR TCA 90 bp AATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGCTACGAGCTGGGAGAAGATaGAGTCAAACTCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: NYCSIRRRKRTNQCNPVLRAGRR*SQTPQC
Trigger: GCATTGAGGAGTTTGACTTCATCTTCTCCCAGCTCG...TAGCACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR TCA 90 bp ACAGAACACAGAACACATTTGCAATATTCAGCCTGTCAAACCTTGCCTGGGACATTCCCTTTTTGTATCTaGCAAATCCAGTTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: TEHRTHLQYSACQTLPGTFPFCI*QIQLLR
Trigger: CCTCAACAACTGGATTTGTCAGATACAAAAAGGGAA...TGTCCCAGGCAAGGTTTGACAGGCTGAATATTGCAAATGTGTTCTGTGTTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR TCA 90 bp AATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGCTAGCATGGCAGTGGCATTaGTGCTGCTGTTATGTCTCT +
Preference number: 4 (lower is better)
Translates to: NYCSIRRRKRTNQCNPVLAWQWH*CCCYVS
Trigger: AGAGACATAACAGCAGCATCAATGCCACTGCCATGC...TAGCACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR TCA 90 bp GACGCTAGTGCTGTGTATTCATCAAAGGTATCTTCAAAAGTGGCAATCAACAATACATGTGTTCTGCGTTaGTATCATTCAGCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: DASAVYSSKVSSKVAINNTCVLR*YHSAQS
Trigger: GGACTGGGCTGAATGATATCAACGCAGAACACATGT...ATTGTTGATTGCCACTTTTGAAGATACCTTTGATGAATACACAGCACTAGCGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR TCA 90 bp ACTCTTGAAATCTGCAGGGTTGACATGAGACCTACCACCAGTGTAGCAGTGTTAGACTCAGATTACTGTTaGAGTAGAGAGTGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: TLEICRVDMRPTTSVAVLDSDYC*SRECFQ
Trigger: TTGAAAACACTCTCTACTTCAACAGTAATCTGAGTC...TAACACTGCTACACTGGTGGTAGGTCTCATGTCAACCCTGCAGATTTCAAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR GCA 90 bp GACGCTAGTGCTGTGTATTCATCAAAGGTATCTTCAAAAGTGGCAATCAACAATGCGAGTCACTCCTTCTaGCCAATGTTTGCACACAAA +
Preference number: 4 (lower is better)
Translates to: DASAVYSSKVSSKVAINNASHSF*PMFAHK
Trigger: TTTGTGTGCAAACATTGGGCAGAAGGAGTGACTCGC...ATTGTTGATTGCCACTTTTGAAGATACCTTTGATGAATACACAGCACTAGCGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR GCA 90 bp ACTCTTGAAATCTGCAGGGTTGACATGAGACCTACCACCAGTGTAGCAGTGTTAGTTTTCATCATCATTTaGAAAGTTGGGTTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: TLEICRVDMRPTTSVAVLVFIII*KVGFSC
Trigger: ACAGGAGAACCCAACTTTGCAAATGATGATGAAAAC...TAACACTGCTACACTGGTGGTAGGTCTCATGTCAACCCTGCAGATTTCAAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR GCA 90 bp ACTCTTGAAATCTGCAGGGTTGACATGAGACCTACCACCAGTGTAGCAGTGTTAGTGATAGGTAACAAATaGTTGCTCTTGTGCATTTTC +
Preference number: 4 (lower is better)
Translates to: TLEICRVDMRPTTSVAVLVIGNK*LLLCIF
Trigger: GAAAATGCACAAGAGCAAGCATTTGTTACCTATCAC...TAACACTGCTACACTGGTGGTAGGTCTCATGTCAACCCTGCAGATTTCAAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CCA 90 bp AGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGGGTACCCCAGTTTTCTaGACATTTGGGTTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: SNYCSIRRRKRTNQCNPVGTPVF*TFGFRS
Trigger: ACTCCTGAACCCAAATGTCCAGAAAACTGGGGTACC...CACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CCA 90 bp AGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGATCTGCAGTAACTGGTaGATTGTCTTGTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SNYCSIRRRKRTNQCNPVICSNW*IVLWSR
Trigger: CCTGCTCCACAAGACAATCCACCAGTTACTGCAGAT...CACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CCA 90 bp ACAGAACACAGAACACATTTGCAATATTCAGCCTGTCAAACCTTGCCTGGGACACTGCTGTTATGTCTCTaGCAGATGAAGTTATTTGGA +
Preference number: 4 (lower is better)
Translates to: TEHRTHLQYSACQTLPGTLLLCL*QMKLFG
Trigger: TCCAAATAACTTCATCTGCCAGAGACATAACAGCAG...TGTCCCAGGCAAGGTTTGACAGGCTGAATATTGCAAATGTGTTCTGTGTTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CCA 90 bp ACAGAACACAGAACACATTTGCAATATTCAGCCTGTCAAACCTTGCCTGGGACACTTGTGCATTTTCTATaGACACCAGGTTTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: TEHRTHLQYSACQTLPGTLVHFL*TPGFLS
Trigger: TGAAAGGAAACCTGGTGTCCATAGAAAATGCACAAG...TGTCCCAGGCAAGGTTTGACAGGCTGAATATTGCAAATGTGTTCTGTGTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CCA 90 bp AGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGTTTTGGAGTAGTGGTTaGAGAAACAGGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SNYCSIRRRKRTNQCNPVFWSSG*RNRQGR
Trigger: CCTTCCCTGCCTGTTTCTCCAACCACTACTCCAAAA...CACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR TCA 90 bp AATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGCTATGTGGTTTGCATCAGTaGAGGTGGATAGAGTGGATC +
Preference number: 4 (lower is better)
Translates to: NYCSIRRRKRTNQCNPVLCGLHQ*RWIEWI
Trigger: GATCCACTCTATCCACCTTCACTGATGCAAACCACA...TAGCACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR TCA 90 bp ATGAGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCACATTCCAGAGAAGCCTaGCCCCAACTTCTCGTAAAA +
Preference number: 4 (lower is better)
Translates to: MSNYCSIRRRKRTNQCNPHSREA*PQLLVK
Trigger: TTTTACGAGAAGTTGGGGTCAGGCTTCTCTGGAATG...TGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR TCA 90 bp AATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGCTACGCCTGTTTTCCAGTTaGCAAAGGAGACAGGATTGT +
Preference number: 4 (lower is better)
Translates to: NYCSIRRRKRTNQCNPVLRLFSS*QRRQDC
Trigger: ACAATCCTGTCTCCTTTGTCAACTGGAAAACAGGCG...TAGCACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR GCA 90 bp AGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGAGTCAAACTCCTCAATaGTGTGGATACTTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SNYCSIRRRKRTNQCNPVSQTPQ*CGYLPG
Trigger: ACCTGGCAAGTATCCACAGCATTGAGGAGTTTGACT...CACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR GCA 90 bp AATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGCTATATCATTCCAGGACATaGCAGGGTCACCTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: NYCSIRRRKRTNQCNPVLYHSRT*QGHLSA
Trigger: AGCTGAAAGGTGACCCTGGCATGTCCTGGAATGATA...TAGCACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CCA 90 bp AATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGCTAGGCTCATATCCGAGCTaGGAGAAGATGAAGTCAAAC +
Preference number: 4 (lower is better)
Translates to: NYCSIRRRKRTNQCNPVLGSYPS*EKMKSN
Trigger: GTTTGACTTCATCTTCTCCCAGCTCGGATATGAGCC...TAGCACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CCA 90 bp ATCAGGACTGCTGAAAAAGACCTGAATACATTCTTATTCAATCTGGGGTTATGTGTTGTTCTCATGGCTTaGCTCTCCAGGAAGCCATTT +
Preference number: 4 (lower is better)
Translates to: IRTAEKDLNTFLFNLGLCVVLMA*LSRKPF
Trigger: AAATGGCTTCCTGGAGAGCCAAGCCATGAGAACAAC...ACATAACCCCAGATTGAATAAGAATGTATTCAGGTCTTTTTCAGCAGTCCTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CCA 90 bp ACAGAACACAGAACACATTTGCAATATTCAGCCTGTCAAACCTTGCCTGGGACAGCAGATGAAGTTATTTaGATAACCACAGTTGATGTC +
Preference number: 4 (lower is better)
Translates to: TEHRTHLQYSACQTLPGTADEVI*ITTVDV
Trigger: GACATCAACTGTGGTTATCCAAATAACTTCATCTGC...TGTCCCAGGCAAGGTTTGACAGGCTGAATATTGCAAATGTGTTCTGTGTTCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CCA 90 bp ACTCTTGAAATCTGCAGGGTTGACATGAGACCTACCACCAGTGTAGCAGTGTTAAAGTATATTCATTATTaGTCAAGTTGCTGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: TLEICRVDMRPTTSVAVLKYIHY*SSCCSG
Trigger: CCCTGAACAGCAACTTGACCAATAATGAATATACTT...TAACACTGCTACACTGGTGGTAGGTCTCATGTCAACCCTGCAGATTTCAAGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CCA 90 bp AATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGCTAGGTATGACAGAAAACTaGACTCAGCAGCAGTCTCGA +
Preference number: 4 (lower is better)
Translates to: NYCSIRRRKRTNQCNPVLGMTEN*TQQQSR
Trigger: TCGAGACTGCTGCTGAGTCCAGTTTTCTGTCATACC...TAGCACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR TCA 90 bp AGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGACTTTCATTGCAGTATaGTGTTCTCCAGTAGCCATC +
Preference number: 4 (lower is better)
Translates to: SNYCSIRRRKRTNQCNPVTFIAV*CSPVAI
Trigger: GATGGCTACTGGAGAACATCATACTGCAATGAAAGT...CACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR GCA 90 bp ATCAGGACTGCTGAAAAAGACCTGAATACATTCTTATTCAATCTGGGGTTATGTAATAACCCACCCATCTaGAGTAACTGGTGGATTGTC +
Preference number: 4 (lower is better)
Translates to: IRTAEKDLNTFLFNLGLCNNPPI*SNWWIV
Trigger: GACAATCCACCAGTTACTGCAGATGGGTGGGTTATT...ACATAACCCCAGATTGAATAAGAATGTATTCAGGTCTTTTTCAGCAGTCCTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR GCA 90 bp ATGAGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAATTCTTCTTGCAAAATaGTCGCGCGTTGTCCATGGT +
Preference number: 4 (lower is better)
Translates to: MSNYCSIRRRKRTNQCNPILLAK*SRVVHG
Trigger: ACCATGGACAACGCGCGAGCATTTTGCAAGAAGAAT...TGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR GCA 90 bp ATGAGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCACAGGAACATGTGTTCTaGGTTGATATCATTCAGCCC +
Preference number: 4 (lower is better)
Translates to: MSNYCSIRRRKRTNQCNPQEHVF*VDIIQP
Trigger: GGGCTGAATGATATCAACGCAGAACACATGTTCCTG...TGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR GCA 90 bp ACAGAACACAGAACACATTTGCAATATTCAGCCTGTCAAACCTTGCCTGGGACAGGTACATTAAATGGGTaGATTTTCATCCATGCAAAT +
Preference number: 4 (lower is better)
Translates to: TEHRTHLQYSACQTLPGTGTLNG*IFIHAN
Trigger: ATTTGCATGGATGAAAATGCACCCATTTAATGTACC...TGTCCCAGGCAAGGTTTGACAGGCTGAATATTGCAAATGTGTTCTGTGTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CCA 90 bp GACGCTAGTGCTGTGTATTCATCAAAGGTATCTTCAAAAGTGGCAATCAACAATTTTAGTAAATGTCACTaGGGTTCCATCACTCCACTC +
Preference number: 4 (lower is better)
Translates to: DASAVYSSKVSSKVAINNFSKCH*GSITPL
Trigger: GAGTGGAGTGATGGAACCCCAGTGACATTTACTAAA...ATTGTTGATTGCCACTTTTGAAGATACCTTTGATGAATACACAGCACTAGCGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CCA 90 bp AGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGGGATCCATCTTCCTTTaGTCAGCTTTGGTTGTAATG +
Preference number: 4 (lower is better)
Translates to: SNYCSIRRRKRTNQCNPVGSIFL*SALVVM
Trigger: CATTACAACCAAAGCTGACCAAAGGAAGATGGATCC...CACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
3UTR CAA 72 bp CACAGAACACATTTGCAATATTCAGCCTGTCAAACCTaGCCTGGGACAAACAAGATTCTCAGTAGCTTTATT +
Preference number: 4 (lower is better)
Translates to: HRTHLQYSACQT*PGTNKILSSFI
Trigger: AATAAAGCTACTGAGAATCTTGTTTGTCCCAGGCAAGGTTTGACAGGCTGAATATTGCAAATGTGTTCTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
3UTR CAA 72 bp CTTCCTAATATACATACAACAGAACACAGAACACATTaGCAATATTCAGCCTGTCAAACCTTGCCTGGGACA +
Preference number: 4 (lower is better)
Translates to: LPNIHTTEHRTH*QYSACQTLPGT
Trigger: TGTCCCAGGCAAGGTTTGACAGGCTGAATATTGCAAATGTGTTCTGTGTTCTGTTGTATGTATATTAGGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR TCA 90 bp AATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGCTAATAACTCTGTGCCCTTaGTTCCAAAGAGTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: NYCSIRRRKRTNQCNPVLITLCP*FQRVCH
Trigger: ATGACACACTCTTTGGAATCAAGGGCACAGAGTTAT...TAGCACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR GCA 90 bp GACGCTAGTGCTGTGTATTCATCAAAGGTATCTTCAAAAGTGGCAATCAACAATAAGCCTTTTCATTTGTaGATGTGTGGTTTGCATCAG +
Preference number: 4 (lower is better)
Translates to: DASAVYSSKVSSKVAINNKPFHL*MCGLHQ
Trigger: CTGATGCAAACCACACATGCACAAATGAAAAGGCTT...ATTGTTGATTGCCACTTTTGAAGATACCTTTGATGAATACACAGCACTAGCGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR GCA 90 bp AGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGGGGAAGTATGATCCTTaGAATATGTCTCTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: SNYCSIRRRKRTNQCNPVGKYDP*NMSLLH
Trigger: ATGAAGCAGAGACATATTGCAAGGATCATACTTCCC...CACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR GCA 90 bp AGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGCATTATTGGTCAAGTTaGTGTTCAGGGCAATCCATA +
Preference number: 4 (lower is better)
Translates to: SNYCSIRRRKRTNQCNPVHYWSS*CSGQSI
Trigger: TATGGATTGCCCTGAACAGCAACTTGACCAATAATG...CACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CCA 90 bp ATGAGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTTTTCAAACTTGAATaGAAATGCACAGACGGCTCC +
Preference number: 4 (lower is better)
Translates to: MSNYCSIRRRKRTNQCNPVFKLE*KCTDGS
Trigger: GGAGCCGTCTGTGCATTTCCATTCAAGTTTGAAAAC...TGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CCA 90 bp ATCAGGACTGCTGAAAAAGACCTGAATACATTCTTATTCAATCTGGGGTTATGTTCATTTGTGCATGTGTaGTTTGCATCAGTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: IRTAEKDLNTFLFNLGLCSFVHV*FASVKV
Trigger: CACCTTCACTGATGCAAACCACACATGCACAAATGA...ACATAACCCCAGATTGAATAAGAATGTATTCAGGTCTTTTTCAGCAGTCCTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CCA 90 bp AATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGCTAAGTTTTCTGGACATTTaGGTTCAGGAGTTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: NYCSIRRRKRTNQCNPVLSFLDI*VQELLW
Trigger: CCACAACAACTCCTGAACCCAAATGTCCAGAAAACT...TAGCACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR GCA 90 bp AATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGCTATCCTTCCTACAAGCTTaGAAAGCATATTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: NYCSIRRRKRTNQCNPVLSFLQA*KAYFWI
Trigger: GATCCAGAAATATGCTTTGCAAGCTTGTAGGAAGGA...TAGCACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR GCA 90 bp ATCAGGACTGCTGAAAAAGACCTGAATACATTCTTATTCAATCTGGGGTTATGTAGCCTCCAAATCACTTaGTGTTCATCTTTACTCTTG +
Preference number: 4 (lower is better)
Translates to: IRTAEKDLNTFLFNLGLCSLQIT*CSSLLL
Trigger: CAAGAGTAAAGATGAACAGCAAGTGATTTGGAGGCT...ACATAACCCCAGATTGAATAAGAATGTATTCAGGTCTTTTTCAGCAGTCCTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR GCA 90 bp ATCAGGACTGCTGAAAAAGACCTGAATACATTCTTATTCAATCTGGGGTTATGTTATGTCTCTGCTTCATaGCATGGTAGCTTCAATTTC +
Preference number: 4 (lower is better)
Translates to: IRTAEKDLNTFLFNLGLCYVSAS*HGSFNF
Trigger: GAAATTGAAGCTACCATGGCATGAAGCAGAGACATA...ACATAACCCCAGATTGAATAAGAATGTATTCAGGTCTTTTTCAGCAGTCCTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CCA 90 bp AGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGTATGGGTACATTAAATaGGTGCATTTTCATCCATGC +
Preference number: 4 (lower is better)
Translates to: SNYCSIRRRKRTNQCNPVYGYIK*VHFHPC
Trigger: GCATGGATGAAAATGCACCCATTTAATGTACCCATA...CACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CCA 90 bp ATCAGGACTGCTGAAAAAGACCTGAATACATTCTTATTCAATCTGGGGTTATGTTTGTACGAAGAACAGTaGATATTATTCCAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: IRTAEKDLNTFLFNLGLCLYEEQ*ILFQRP
Trigger: GGGCCTTTGGAATAATATCCACTGTTCTTCGTACAA...ACATAACCCCAGATTGAATAAGAATGTATTCAGGTCTTTTTCAGCAGTCCTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR TCA 90 bp ATCAGGACTGCTGAAAAAGACCTGAATACATTCTTATTCAATCTGGGGTTATGTCTTTTGCATACAGTTTaGAACACATGCTGGTTTTAC +
Preference number: 4 (lower is better)
Translates to: IRTAEKDLNTFLFNLGLCLLHTV*NTCWFY
Trigger: GTAAAACCAGCATGTGTTTCAAACTGTATGCAAAAG...ACATAACCCCAGATTGAATAAGAATGTATTCAGGTCTTTTTCAGCAGTCCTGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR GCA 90 bp AATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGCTACAAACTAGTCAGGAATaGTTGTTCATATCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: NYCSIRRRKRTNQCNPVLQTSQE*LFISVF
Trigger: GAAGACAGATATGAACAAGCATTCCTGACTAGTTTG...TAGCACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR GCA 90 bp AATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGCTACTTCTGCCCAATGTTTaGACACAAATTTTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: NYCSIRRRKRTNQCNPVLLLPNV*TQILPF
Trigger: AAAAGGCAAAATTTGTGTGCAAACATTGGGCAGAAG...TAGCACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR GCA 90 bp ATCAGGACTGCTGAAAAAGACCTGAATACATTCTTATTCAATCTGGGGTTATGTCAACATTTCGGAACATaGCTATCCAAAAATTGGTTT +
Preference number: 4 (lower is better)
Translates to: IRTAEKDLNTFLFNLGLCQHFGT*LSKNWF
Trigger: AAACCAATTTTTGGATAGGCATGTTCCGAAATGTTG...ACATAACCCCAGATTGAATAAGAATGTATTCAGGTCTTTTTCAGCAGTCCTGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 90 bp GCAATGGACAAAATCCAAACAGCTTGTCTTTGTCGTAGTCAGTGGTaGTTCCACACCAGAGCCATCCGTCCGAGCGCCCGGCAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: AMDKIQTACLCRSQW*FHTRAIRPSARQRC
Trigger: GCACCTCTGCCGGGCGCTCGGACGGATGGCTCTGGTGTGGAACCACCACTGACTACGACAAAGACAAGCTGTTTGGATTTTGTCCATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 90 bp ACCTGCCACTCCGGTTTTCATGGCAACACATCCCGCCTTTCGTCCTaGCATGTCGGCATTCCAGTGTGTAAACTGCACCTGCTCGTCCAC +
Preference number: 5 (lower is better)
Translates to: TCHSGFHGNTSRLSS*HVGIPVCKLHLLVH
Trigger: GTGGACGAGCAGGTGCAGTTTACACACTGGAATGCCGACATGCCAGGACGAAAGGCGGGATGTGTTGCCATGAAAACCGGAGTGGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS TCA 90 bp GGCTTCCTCCAGCCCACTGCCAACCACTGCGTACACTCAGACTGTTaGGTCCAATCCAGAGTCCCGAGCTCAAGGAACTGGTTAATCCTG +
Preference number: 5 (lower is better)
Translates to: GFLQPTANHCVHSDC*VQSRVPSSRNWLIL
Trigger: CAGGATTAACCAGTTCCTTGAGCTCGGGACTCTGGATTGGACTCAACAGTCTGAGTGTACGCAGTGGTTGGCAGTGGGCTGGAGGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS GCA 90 bp TCCACACCAGAGCCATCCGTCCGAGCGCCCGGCAGAGGTGCAGTCTaGATACCACTTGTTTTCAAACTTGAATGGAAATGCACAGACGGC +
Preference number: 5 (lower is better)
Translates to: STPEPSVRAPGRGAV*IPLVFKLEWKCTDG
Trigger: GCCGTCTGTGCATTTCCATTCAAGTTTGAAAACAAGTGGTATGCAGACTGCACCTCTGCCGGGCGCTCGGACGGATGGCTCTGGTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS GCA 90 bp CCTGGTAGCCAGTTCAGATACCGGAATGGGCTTCCTCCAGCCCACTaGCAACCACTGCGTACACTCAGACTGTTGAGTCCAATCCAGAGT +
Preference number: 5 (lower is better)
Translates to: PGSQFRYRNGLPPAH*QPLRTLRLLSPIQS
Trigger: ACTCTGGATTGGACTCAACAGTCTGAGTGTACGCAGTGGTTGGCAGTGGGCTGGAGGAAGCCCATTCCGGTATCTGAACTGGCTACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS GCA 90 bp GCCGGCACCTATCACAATCAGGAGGACCACGGTGACCACTCCTGCTaGTTTAGAAGAGCCCTTGGGTTGAGGATCCATCTTCCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: AGTYHNQEDHGDHSC*FRRALGLRIHLPLV
Trigger: GACCAAAGGAAGATGGATCCTCAACCCAAGGGCTCTTCTAAAGCAGCAGGAGTGGTCACCGTGGTCCTCCTGATTGTGATAGGTGCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 90 bp AGTGCAATGGACAAAATCCAAACAGCTTGTCTTTGTCGTAGTCAGTaGTGGTTCCACACCAGAGCCATCCGTCCGAGCGCCCGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: SAMDKIQTACLCRSQ*WFHTRAIRPSARQR
Trigger: CCTCTGCCGGGCGCTCGGACGGATGGCTCTGGTGTGGAACCACCACTGACTACGACAAAGACAAGCTGTTTGGATTTTGTCCATTGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS GCA 90 bp GAGAATCTGACACCCAGCGGAATTTCTGGGATTCAGCTTCCGGGTTaGAAGTTGCCGTCTGAACTGAGATGGCACTTAGAGCGTCCACGC +
Preference number: 5 (lower is better)
Translates to: ENLTPSGISGIQLPG*KLPSELRWHLERPR
Trigger: GCGTGGACGCTCTAAGTGCCATCTCAGTTCAGACGGCAACTTGCAACCCGGAAGCTGAATCCCAGAAATTCCGCTGGGTGTCAGATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS GCA 90 bp TTTCTGGATCTTCTTCTCTTCCCTATGGATCCTGTAGCAGTGGCCTaGATAGGGCCACCACTGATTAGGGCAGCCGGTAGGCACATCGCT +
Preference number: 5 (lower is better)
Translates to: FLDLLLFPMDPVAVA*IGPPLIRAAGRHIA
Trigger: AGCGATGTGCCTACCGGCTGCCCTAATCAGTGGTGGCCCTATGCAGGCCACTGCTACAGGATCCATAGGGAAGAGAAGAAGATCCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 90 bp TGGTGGTACCCCAGTTTTCTGGACATTTGGGTTCAGGAGTTGTTGTaGGCTCTGGTGGGCGAGTCACTCCTTCTGCCCAATGTTTGCACA +
Preference number: 5 (lower is better)
Translates to: WWYPSFLDIWVQELL*ALVGESLLLPNVCT
Trigger: TGTGCAAACATTGGGCAGAAGGAGTGACTCGCCCACCAGAGCCCACAACAACTCCTGAACCCAAATGTCCAGAAAACTGGGGTACCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 90 bp AAAGCACTTGTTCTTGTACAAATGCCAACCTTCCTTGCAGCCACCTaGTGTCGTGGGTGTGGTAGGCATGGCAGTGGCATTGATGCTGCT +
Preference number: 5 (lower is better)
Translates to: KALVLVQMPTFLAAT*CRGCGRHGSGIDAA
Trigger: AGCAGCATCAATGCCACTGCCATGCCTACCACACCCACGACACCAGGTGGCTGCAAGGAAGGTTGGCATTTGTACAAGAACAAGTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS TCA 90 bp AGGACCACGGTGACCACTCCTGCTGCTTTAGAAGAGCCCTTGGGTTaGGGATCCATCTTCCTTTGGTCAGCTTTGGTTGTAATGGATGAG +
Preference number: 5 (lower is better)
Translates to: RTTVTTPAALEEPLG*GSIFLWSALVVMDE
Trigger: CTCATCCATTACAACCAAAGCTGACCAAAGGAAGATGGATCCTCAACCCAAGGGCTCTTCTAAAGCAGCAGGAGTGGTCACCGTGGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 90 bp TCTGGGATTCAGCTTCCGGGTTGCAAGTTGCCGTCTGAACTGAGATaGCACTTAGAGCGTCCACGCAGCGCTTGTGATCTTCATTATAGA +
Preference number: 5 (lower is better)
Translates to: SGIQLPGCKLPSELR*HLERPRSACDLHYR
Trigger: TCTATAATGAAGATCACAAGCGCTGCGTGGACGCTCTAAGTGCCATCTCAGTTCAGACGGCAACTTGCAACCCGGAAGCTGAATCCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS TCA 90 bp CAATCCACAGCTCATCATTTGGCTCATATCCGAGCTGGGAGAAGATaGAGTCAAACTCCTCAATGCTGTGGATACTTGCCAGGTCCCCAC +
Preference number: 5 (lower is better)
Translates to: QSTAHHLAHIRAGRR*SQTPQCCGYLPGPH
Trigger: GTGGGGACCTGGCAAGTATCCACAGCATTGAGGAGTTTGACTTCATCTTCTCCCAGCTCGGATATGAGCCAAATGATGAGCTGTGGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 90 bp GAAATGCACAGACGGCTCCATTTGCATTGCCCAGTAAGGAGTACATaGCTTCATATCCTCTCGAGCACAGGTCATCCGTGGTTCCATAGA +
Preference number: 5 (lower is better)
Translates to: EMHRRLHLHCPVRST*LHILSSTGHPWFHR
Trigger: TCTATGGAACCACGGATGACCTGTGCTCGAGAGGATATGAAGCCATGTACTCCTTACTGGGCAATGCAAATGGAGCCGTCTGTGCATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 90 bp TCATATCCGAGCTGGGAGAAGATGAAGTCAAACTCCTCAATGCTGTaGATACTTGCCAGGTCCCCACCCTCCTTCCTACAAGCTTGCAAA +
Preference number: 5 (lower is better)
Translates to: SYPSWEKMKSNSSML*ILARSPPSFLQACK
Trigger: TTTGCAAGCTTGTAGGAAGGAGGGTGGGGACCTGGCAAGTATCCACAGCATTGAGGAGTTTGACTTCATCTTCTCCCAGCTCGGATATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 90 bp GCCTTTCATAACCACGCAGTCCTCCTGTCTGTTGTTCTCATGGCTTaGCTCTCCAGGAAGCCATTTAGTAAATGTCACTGGGGTTCCATC +
Preference number: 5 (lower is better)
Translates to: AFHNHAVLLSVVLMA*LSRKPFSKCHWGSI
Trigger: GATGGAACCCCAGTGACATTTACTAAATGGCTTCCTGGAGAGCCAAGCCATGAGAACAACAGACAGGAGGACTGCGTGGTTATGAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 90 bp CCAGTTTTCTGGACATTTGGGTTCAGGAGTTGTTGTGGGCTCTGGTaGGCGAGTCACTCCTTCTGCCCAATGTTTGCACACAAATTTTGC +
Preference number: 5 (lower is better)
Translates to: PVFWTFGFRSCCGLW*ASHSFCPMFAHKFC
Trigger: GCAAAATTTGTGTGCAAACATTGGGCAGAAGGAGTGACTCGCCCACCAGAGCCCACAACAACTCCTGAACCCAAATGTCCAGAAAACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 90 bp ACCCCAGTTTTCTGGACATTTGGGTTCAGGAGTTGTTGTGGGCTCTaGTGGGCGAGTCACTCCTTCTGCCCAATGTTTGCACACAAATTT +
Preference number: 5 (lower is better)
Translates to: TPVFWTFGFRSCCGL*WASHSFCPMFAHKF
Trigger: AAATTTGTGTGCAAACATTGGGCAGAAGGAGTGACTCGCCCACCAGAGCCCACAACAACTCCTGAACCCAAATGTCCAGAAAACTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp ACAGAACACAGAACACATTTGCAATATTCAGCCTGTCAAACCTTGCCTGGGACACAATGCTGTGGATACTaGCCAGGTCCCCACCCTCCT +
Preference number: 5 (lower is better)
Translates to: TEHRTHLQYSACQTLPGTQCCGY*PGPHPP
Trigger: AGGAGGGTGGGGACCTGGCAAGTATCCACAGCATTG...TGTCCCAGGCAAGGTTTGACAGGCTGAATATTGCAAATGTGTTCTGTGTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS TCA 90 bp AAAATAGTAGCAATGGCCATAGAAAGGAATCCACGCAGTCTGTTCTaGCTCTGGACACTTGCCAGGCAGTTGAGGAGGTTCAGTAGCAGG +
Preference number: 5 (lower is better)
Translates to: KIVAMAIERNPRSLF*LWTLARQLRRFSSR
Trigger: CCTGCTACTGAACCTCCTCAACTGCCTGGCAAGTGTCCAGAGTCAGAACAGACTGCGTGGATTCCTTTCTATGGCCATTGCTACTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS GCA 90 bp TACTGTCACAGGTGTCATCCATCCAGGTCCCTGCCTCTCGTGAATTaGCACCAATCACAACTACACAGTCAGCATCTTCATAAGATAGGC +
Preference number: 5 (lower is better)
Translates to: YCHRCHPSRSLPLVN*HQSQLHSQHLHKIG
Trigger: GCCTATCTTATGAAGATGCTGACTGTGTAGTTGTGATTGGTGGCAATTCACGAGAGGCAGGGACCTGGATGGATGACACCTGTGACAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS GCA 90 bp TTGAGGTATGTGCAACGCATGCCTTTTCTTATAAAAGAAATAGGCTaGAACGCCGGCACCTATCACAATCAGGAGGACCACGGTGACCAC +
Preference number: 5 (lower is better)
Translates to: LRYVQRMPFLIKEIG*NAGTYHNQEDHGDH
Trigger: GTGGTCACCGTGGTCCTCCTGATTGTGATAGGTGCCGGCGTTGCAGCCTATTTCTTTTATAAGAAAAGGCATGCGTTGCACATACCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 90 bp GCTGCTTGCAGCTTGCCCTTGCCTGATGCCAGGTTAAAGCAGACTTaGAGTTTATCTGGTAAAGAATGCCAGTCAGTGGATCTTTGTTCC +
Preference number: 5 (lower is better)
Translates to: AACSLPLPDARLKQT*SLSGKECQSVDLCS
Trigger: GGAACAAAGATCCACTGACTGGCATTCTTTACCAGATAAACTCCAAGTCTGCTTTAACCTGGCATCAGGCAAGGGCAAGCTGCAAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 90 bp TCCTTGCCTTTCATAACCACGCAGTCCTCCTGTCTGTTGTTCTCATaGCTTGGCTCTCCAGGAAGCCATTTAGTAAATGTCACTGGGGTT +
Preference number: 5 (lower is better)
Translates to: SLPFITTQSSCLLFS*LGSPGSHLVNVTGV
Trigger: AACCCCAGTGACATTTACTAAATGGCTTCCTGGAGAGCCAAGCCATGAGAACAACAGACAGGAGGACTGCGTGGTTATGAAAGGCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp ACTCTTGAAATCTGCAGGGTTGACATGAGACCTACCACCAGTGTAGCAGTGTTACACAGACGGCTCCATTaGCATTGCCCAGTAAGGAGT +
Preference number: 5 (lower is better)
Translates to: TLEICRVDMRPTTSVAVLHRRLH*HCPVRS
Trigger: ACTCCTTACTGGGCAATGCAAATGGAGCCGTCTGTG...TAACACTGCTACACTGGTGGTAGGTCTCATGTCAACCCTGCAGATTTCAAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp ACAGAACACAGAACACATTTGCAATATTCAGCCTGTCAAACCTTGCCTGGGACAATTTGGGTTCAGGAGTaGTTGTGGGCTCTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: TEHRTHLQYSACQTLPGTIWVQE*LWALVG
Trigger: GCCCACCAGAGCCCACAACAACTCCTGAACCCAAAT...TGTCCCAGGCAAGGTTTGACAGGCTGAATATTGCAAATGTGTTCTGTGTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS TCA 90 bp ATAGGGCCACCACTGATTAGGGCAGCCGGTAGGCACATCGCTTGCTaGGGGAATGATAAATGGGTTCAAGGTATTGTTTCCCTTTTTACA +
Preference number: 5 (lower is better)
Translates to: IGPPLIRAAGRHIAC*GNDKWVQGIVSLFT
Trigger: TGTAAAAAGGGAAACAATACCTTGAACCCATTTATCATTCCCTCAGCAAGCGATGTGCCTACCGGCTGCCCTAATCAGTGGTGGCCCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS TCA 90 bp CTACACAATCATTCCGTTCACCAGAGGGATCGCCTGTTTTCCAGTTaGCAAAGGAGACAGGATTGTCGTTCAACCAAAGCCACTTCCCTT +
Preference number: 5 (lower is better)
Translates to: LHNHSVHQRDRLFSS*QRRQDCRSTKATSL
Trigger: AAGGGAAGTGGCTTTGGTTGAACGACAATCCTGTCTCCTTTGTCAACTGGAAAACAGGCGATCCCTCTGGTGAACGGAATGATTGTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp AGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGTCTGCTGCTTGCAGCTaGCCCTTGCCTGATGCCAGG +
Preference number: 5 (lower is better)
Translates to: SNYCSIRRRKRTNQCNPVSAACS*PLPDAR
Trigger: CCTGGCATCAGGCAAGGGCAAGCTGCAAGCAGCAGA...CACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp ACAGAACACAGAACACATTTGCAATATTCAGCCTGTCAAACCTTGCCTGGGACACAGTCCTCCTGTCTGTaGTTCTCATGGCTTGGCTCT +
Preference number: 5 (lower is better)
Translates to: TEHRTHLQYSACQTLPGTQSSCL*FSWLGS
Trigger: AGAGCCAAGCCATGAGAACAACAGACAGGAGGACTG...TGTCCCAGGCAAGGTTTGACAGGCTGAATATTGCAAATGTGTTCTGTGTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS TCA 90 bp TTGTTTACTGTCACAGGTGTCATCCATCCAGGTCCCTGCCTCTCGTaGATTGCCACCAATCACAACTACACAGTCAGCATCTTCATAAGA +
Preference number: 5 (lower is better)
Translates to: LFTVTGVIHPGPCLS*IATNHNYTVSIFIR
Trigger: TCTTATGAAGATGCTGACTGTGTAGTTGTGATTGGTGGCAATTCACGAGAGGCAGGGACCTGGATGGATGACACCTGTGACAGTAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS GCA 90 bp TGTATAATGAACTCCTTGTCCAGCTGTCCACAGGAACATGTGTTCTaGGTTGATATCATTCAGCCCAGTCCAGGCATTGAAAGTGGAGTC +
Preference number: 5 (lower is better)
Translates to: CIMNSLSSCPQEHVF*VDIIQPSPGIESGV
Trigger: GACTCCACTTTCAATGCCTGGACTGGGCTGAATGATATCAACGCAGAACACATGTTCCTGTGGACAGCTGGACAAGGAGTTCATTATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp ATGAGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCATGGGTTCAGGAGTTGTaGTGGGCTCTGGTGGGCGAG +
Preference number: 5 (lower is better)
Translates to: MSNYCSIRRRKRTNQCNPWVQEL*WALVGE
Trigger: CTCGCCCACCAGAGCCCACAACAACTCCTGAACCCA...TGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS TCA 90 bp TTTGATGGCACTCCCAAACATAATTTGAAAGCAACACTCATGATCTaGGAATCTGACACCCAGCGGAATTTCTGGGATTCAGCTTCCGGG +
Preference number: 5 (lower is better)
Translates to: FDGTPKHNLKATLMI*ESDTQRNFWDSASG
Trigger: CCCGGAAGCTGAATCCCAGAAATTCCGCTGGGTGTCAGATTCTCAGATCATGAGTGTTGCTTTCAAATTATGTTTGGGAGTGCCATCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS TCA 90 bp GTGCCCTTGATTCCAAAGAGTGTGTCATTCTTACACTCCCATTTCTaGTATTCACTTTTCGAATCACAGGCATACAGGGTGACGGAAGCC +
Preference number: 5 (lower is better)
Translates to: VPLIPKSVSFLHSHF*YSLFESQAYRVTEA
Trigger: GGCTTCCGTCACCCTGTATGCCTGTGATTCGAAAAGTGAATATCAGAAATGGGAGTGTAAGAATGACACACTCTTTGGAATCAAGGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS GCA 90 bp TTTGCTAAAATAGTACTGGTAGTCTTTGTAAATAACCCACCCATCTaGAGTAACTGGTGGATTGTCTTGTGGAGCAGGTGTGGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: FAKIVLVVFVNNPPI*SNWWIVLWSRCGLR
Trigger: CCTGAGCCCACACCTGCTCCACAAGACAATCCACCAGTTACTGCAGATGGGTGGGTTATTTACAAAGACTACCAGTACTATTTTAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 90 bp GTTCTCATGGCTTGGCTCTCCAGGAAGCCATTTAGTAAATGTCACTaGGGTTCCATCACTCCACTCAAAGTACATCTGAATCTTGATGTC +
Preference number: 5 (lower is better)
Translates to: VLMAWLSRKPFSKCH*GSITPLKVHLNLDV
Trigger: GACATCAAGATTCAGATGTACTTTGAGTGGAGTGATGGAACCCCAGTGACATTTACTAAATGGCTTCCTGGAGAGCCAAGCCATGAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp ACTCTTGAAATCTGCAGGGTTGACATGAGACCTACCACCAGTGTAGCAGTGTTAAAGCCCAGTCAGTTTTaGATGGCACTCCCAAACATA +
Preference number: 5 (lower is better)
Translates to: TLEICRVDMRPTTSVAVLKPSQF*MALPNI
Trigger: TATGTTTGGGAGTGCCATCAAAAACTGACTGGGCTT...TAACACTGCTACACTGGTGGTAGGTCTCATGTCAACCCTGCAGATTTCAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp ACTCTTGAAATCTGCAGGGTTGACATGAGACCTACCACCAGTGTAGCAGTGTTAGATCTTTCGTGTCACTaGTTCCTGGACTCAGATTAC +
Preference number: 5 (lower is better)
Translates to: TLEICRVDMRPTTSVAVLDLSCH*FLDSDY
Trigger: GTAATCTGAGTCCAGGAACAAGTGACACGAAAGATC...TAACACTGCTACACTGGTGGTAGGTCTCATGTCAACCCTGCAGATTTCAAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS GCA 90 bp CCTGATGCCAGGTTAAAGCAGACTTGGAGTTTATCTGGTAAAGAATaGCAGTCAGTGGATCTTTGTTCCATAATCTCTCGCTTCCCTCAA +
Preference number: 5 (lower is better)
Translates to: PDARLKQTWSLSGKE*QSVDLCSIISRFPQ
Trigger: TTGAGGGAAGCGAGAGATTATGGAACAAAGATCCACTGACTGGCATTCTTTACCAGATAAACTCCAAGTCTGCTTTAACCTGGCATCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 90 bp ATTCTGCTCGATGTTGCCCATGAGATCTTTCGTGTCACTTGTTCCTaGACTCAGATTACTGTTGAAGTAGAGAGTGTTTTCAAAGGTGGC +
Preference number: 5 (lower is better)
Translates to: ILLDVAHEIFRVTCS*TQITVEVESVFKGG
Trigger: GCCACCTTTGAAAACACTCTCTACTTCAACAGTAATCTGAGTCCAGGAACAAGTGACACGAAAGATCTCATGGGCAACATCGAGCAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp GACGCTAGTGCTGTGTATTCATCAAAGGTATCTTCAAAAGTGGCAATCAACAATCGTACACTCAGACTGTaGAGTCCAATCCAGAGTCCC +
Preference number: 5 (lower is better)
Translates to: DASAVYSSKVSSKVAINNRTLRL*SPIQSP
Trigger: GGGACTCTGGATTGGACTCAACAGTCTGAGTGTACG...ATTGTTGATTGCCACTTTTGAAGATACCTTTGATGAATACACAGCACTAGCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp AGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGTCCACAGCTCATCATTaGGCTCATATCCGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: SNYCSIRRRKRTNQCNPVSTAHH*AHIRAG
Trigger: CCCAGCTCGGATATGAGCCAAATGATGAGCTGTGGA...CACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp ACTCTTGAAATCTGCAGGGTTGACATGAGACCTACCACCAGTGTAGCAGTGTTACCTTCTGCCCAATGTTaGCACACAAATTTTGCCTTT +
Preference number: 5 (lower is better)
Translates to: TLEICRVDMRPTTSVAVLPSAQC*HTNFAF
Trigger: AAAGGCAAAATTTGTGTGCAAACATTGGGCAGAAGG...TAACACTGCTACACTGGTGGTAGGTCTCATGTCAACCCTGCAGATTTCAAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp ACAGAACACAGAACACATTTGCAATATTCAGCCTGTCAAACCTTGCCTGGGACAAACATGTGTTCTGCGTaGATATCATTCAGCCCAGTC +
Preference number: 5 (lower is better)
Translates to: TEHRTHLQYSACQTLPGTNMCSA*ISFSPV
Trigger: GACTGGGCTGAATGATATCAACGCAGAACACATGTT...TGTCCCAGGCAAGGTTTGACAGGCTGAATATTGCAAATGTGTTCTGTGTTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp ACAGAACACAGAACACATTTGCAATATTCAGCCTGTCAAACCTTGCCTGGGACAAGCCTTTCCCCCAGTTaGTATAATGAACTCCTTGTC +
Preference number: 5 (lower is better)
Translates to: TEHRTHLQYSACQTLPGTSLSPS*YNELLV
Trigger: GACAAGGAGTTCATTATACAAACTGGGGGAAAGGCT...TGTCCCAGGCAAGGTTTGACAGGCTGAATATTGCAAATGTGTTCTGTGTTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp ATGAGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAACACTTGCCAGGCAGTaGAGGAGGTTCAGTAGCAGG +
Preference number: 5 (lower is better)
Translates to: MSNYCSIRRRKRTNQCNPTLARQ*RRFSSR
Trigger: CCTGCTACTGAACCTCCTCAACTGCCTGGCAAGTGT...TGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp ACTCTTGAAATCTGCAGGGTTGACATGAGACCTACCACCAGTGTAGCAGTGTTAAGGATCCATCTTCCTTaGGTCAGCTTTGGTTGTAAT +
Preference number: 5 (lower is better)
Translates to: TLEICRVDMRPTTSVAVLRIHLP*VSFGCN
Trigger: ATTACAACCAAAGCTGACCAAAGGAAGATGGATCCT...TAACACTGCTACACTGGTGGTAGGTCTCATGTCAACCCTGCAGATTTCAAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS GCA 90 bp GAAAGTGGAGTCTCTCATGTGATAGGTAACAAATGCTTGCTCTTGTaGATTTTCTATGGACACCAGGTTTCCTTTCAGTCCTTTGCAAGC +
Preference number: 5 (lower is better)
Translates to: ESGVSHVIGNKCLLL*IFYGHQVSFQSFAS
Trigger: GCTTGCAAAGGACTGAAAGGAAACCTGGTGTCCATAGAAAATGCACAAGAGCAAGCATTTGTTACCTATCACATGAGAGACTCCACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp GACGCTAGTGCTGTGTATTCATCAAAGGTATCTTCAAAAGTGGCAATCAACAATTGTTGTTCTCATGGCTaGGCTCTCCAGGAAGCCATT +
Preference number: 5 (lower is better)
Translates to: DASAVYSSKVSSKVAINNCCSHG*ALQEAI
Trigger: AATGGCTTCCTGGAGAGCCAAGCCATGAGAACAACA...ATTGTTGATTGCCACTTTTGAAGATACCTTTGATGAATACACAGCACTAGCGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp ACTCTTGAAATCTGCAGGGTTGACATGAGACCTACCACCAGTGTAGCAGTGTTATCTCCACCTATAGCTTaGCAAAAATCTCGAGATTCA +
Preference number: 5 (lower is better)
Translates to: TLEICRVDMRPTTSVAVLSPPIA*QKSRDS
Trigger: TGAATCTCGAGATTTTTGCAAAGCTATAGGTGGAGA...TAACACTGCTACACTGGTGGTAGGTCTCATGTCAACCCTGCAGATTTCAAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp ATGAGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAAGCCCAGTCCAGGCATaGAAAGTGGAGTCTCTCATG +
Preference number: 5 (lower is better)
Translates to: MSNYCSIRRRKRTNQCNPSPVQA*KVESLM
Trigger: CATGAGAGACTCCACTTTCAATGCCTGGACTGGGCT...TGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp ACTCTTGAAATCTGCAGGGTTGACATGAGACCTACCACCAGTGTAGCAGTGTTACATTTTGGTAATTATTaGGTTCACCGTAAGCCCAAT +
Preference number: 5 (lower is better)
Translates to: TLEICRVDMRPTTSVAVLHFGNY*VHRKPN
Trigger: ATTGGGCTTACGGTGAACCAAATAATTACCAAAATG...TAACACTGCTACACTGGTGGTAGGTCTCATGTCAACCCTGCAGATTTCAAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp ATGAGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCACAAAATGCTCGCGCGTaGTCCATGGTTTCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: MSNYCSIRRRKRTNQCNPQNARA*SMVSFS
Trigger: AGAGAAGGAAACCATGGACAACGCGCGAGCATTTTG...TGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp ACAGAACACAGAACACATTTGCAATATTCAGCCTGTCAAACCTTGCCTGGGACAAGTTTTCATCATCATTaGCAAAGTTGGGTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: TEHRTHLQYSACQTLPGTSFHHH*QSWVLL
Trigger: CAGGAGAACCCAACTTTGCAAATGATGATGAAAACT...TGTCCCAGGCAAGGTTTGACAGGCTGAATATTGCAAATGTGTTCTGTGTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp AATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGCTAAGAAGAGCCCTTGGGTaGAGGATCCATCTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: NYCSIRRRKRTNQCNPVLRRALG*RIHLPL
Trigger: CAAAGGAAGATGGATCCTCAACCCAAGGGCTCTTCT...TAGCACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp AGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGTCATTCTGCTCGATGTaGCCCATGAGATCTTTCGTG +
Preference number: 5 (lower is better)
Translates to: SNYCSIRRRKRTNQCNPVSFCSM*PMRSFV
Trigger: CACGAAAGATCTCATGGGCAACATCGAGCAGAATGA...CACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS TCA 90 bp ATGTCACTGGGGTTCCATCACTCCACTCAAAGTACATCTGAATCTTaGTGTCATTTAAACCAATCCACAGCTCATCATTTGGCTCATATC +
Preference number: 5 (lower is better)
Translates to: MSLGFHHSTQSTSES*CHLNQSTAHHLAHI
Trigger: GATATGAGCCAAATGATGAGCTGTGGATTGGTTTAAATGACATCAAGATTCAGATGTACTTTGAGTGGAGTGATGGAACCCCAGTGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp ACAGAACACAGAACACATTTGCAATATTCAGCCTGTCAAACCTTGCCTGGGACAAATAAGCCTTTTCATTaGTGCATGTGTGGTTTGCAT +
Preference number: 5 (lower is better)
Translates to: TEHRTHLQYSACQTLPGTNKPFH*CMCGLH
Trigger: ATGCAAACCACACATGCACAAATGAAAAGGCTTATT...TGTCCCAGGCAAGGTTTGACAGGCTGAATATTGCAAATGTGTTCTGTGTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp GACGCTAGTGCTGTGTATTCATCAAAGGTATCTTCAAAAGTGGCAATCAACAATCAGTTTTCTGGACATTaGGGTTCAGGAGTTGTTGTG +
Preference number: 5 (lower is better)
Translates to: DASAVYSSKVSSKVAINNQFSGH*GSGVVV
Trigger: CACAACAACTCCTGAACCCAAATGTCCAGAAAACTG...ATTGTTGATTGCCACTTTTGAAGATACCTTTGATGAATACACAGCACTAGCGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp AGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGTCACCAAAATTCTTCTaGCAAAATGCTCGCGCGTTG +
Preference number: 5 (lower is better)
Translates to: SNYCSIRRRKRTNQCNPVSPKFF*QNARAL
Trigger: CAACGCGCGAGCATTTTGCAAGAAGAATTTTGGTGA...CACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp ACAGAACACAGAACACATTTGCAATATTCAGCCTGTCAAACCTTGCCTGGGACAGACTGCCCACCATTCTaGTTTATATATTTCCATAGA +
Preference number: 5 (lower is better)
Translates to: TEHRTHLQYSACQTLPGTDCPPF*FIYFHR
Trigger: TCTATGGAAATATATAAACAAGAATGGTGGGCAGTC...TGTCCCAGGCAAGGTTTGACAGGCTGAATATTGCAAATGTGTTCTGTGTTCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp GACGCTAGTGCTGTGTATTCATCAAAGGTATCTTCAAAAGTGGCAATCAACAATGCCACAAAATCTACTTaGCTCCCATCCATCCAAATG +
Preference number: 5 (lower is better)
Translates to: DASAVYSSKVSSKVAINNATKST*LPSIQM
Trigger: CATTTGGATGGATGGGAGCAAAGTAGATTTTGTGGC...ATTGTTGATTGCCACTTTTGAAGATACCTTTGATGAATACACAGCACTAGCGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp AGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGTCATCATTTGCAAAGTaGGGTTCTCCTGTAGCCCAA +
Preference number: 5 (lower is better)
Translates to: SNYCSIRRRKRTNQCNPVSSFAK*GSPVAQ
Trigger: TTGGGCTACAGGAGAACCCAACTTTGCAAATGATGA...CACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp GACGCTAGTGCTGTGTATTCATCAAAGGTATCTTCAAAAGTGGCAATCAACAATCAGCCTCCAAATCACTaGCTGTTCATCTTTACTCTT +
Preference number: 5 (lower is better)
Translates to: DASAVYSSKVSSKVAINNQPPNH*LFIFTL
Trigger: AAGAGTAAAGATGAACAGCAAGTGATTTGGAGGCTG...ATTGTTGATTGCCACTTTTGAAGATACCTTTGATGAATACACAGCACTAGCGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS TCA 90 bp TTGTTAAATAAGCCTTTTCATTTGTGCATGTGTGGTTTGCATCAGTaGAGGTGGATAGAGTGGATCCAATCAAGTAGCAGTAAAACCCAT +
Preference number: 5 (lower is better)
Translates to: LLNKPFHLCMCGLHQ*RWIEWIQSSSSKTH
Trigger: ATGGGTTTTACTGCTACTTGATTGGATCCACTCTATCCACCTTCACTGATGCAAACCACACATGCACAAATGAAAAGGCTTATTTAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp GACGCTAGTGCTGTGTATTCATCAAAGGTATCTTCAAAAGTGGCAATCAACAATCAGTCTGCATACCACTaGTTTTCAAACTTGAATGGA +
Preference number: 5 (lower is better)
Translates to: DASAVYSSKVSSKVAINNQSAYH*FSNLNG
Trigger: TCCATTCAAGTTTGAAAACAAGTGGTATGCAGACTG...ATTGTTGATTGCCACTTTTGAAGATACCTTTGATGAATACACAGCACTAGCGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp AATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGCTATTGAGGTGTTCACAGTaGATATCATTCCAGGACATG +
Preference number: 5 (lower is better)
Translates to: NYCSIRRRKRTNQCNPVLLRCSQ*ISFQDM
Trigger: CATGTCCTGGAATGATATCAACTGTGAACACCTCAA...TAGCACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp GACGCTAGTGCTGTGTATTCATCAAAGGTATCTTCAAAAGTGGCAATCAACAATAACAAATGCTTGCTCTaGTGCATTTTCTATGGACAC +
Preference number: 5 (lower is better)
Translates to: DASAVYSSKVSSKVAINNNKCLL*CIFYGH
Trigger: GTGTCCATAGAAAATGCACAAGAGCAAGCATTTGTT...ATTGTTGATTGCCACTTTTGAAGATACCTTTGATGAATACACAGCACTAGCGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp AGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAGTGAGGGTCAGTCTGTGTTaGACATATATAGCCTTGTTT +
Preference number: 5 (lower is better)
Translates to: SNYCSIRRRKRTNQCNPVRVSLC*TYIALF
Trigger: AAACAAGGCTATATATGTCAAACACAGACTGACCCT...CACTGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp ATCAGGACTGCTGAAAAAGACCTGAATACATTCTTATTCAATCTGGGGTTATGTTCATTATTGGTCAAGTaGCTGTTCAGGGCAATCCAT +
Preference number: 5 (lower is better)
Translates to: IRTAEKDLNTFLFNLGLCSLLVK*LFRAIH
Trigger: ATGGATTGCCCTGAACAGCAACTTGACCAATAATGA...ACATAACCCCAGATTGAATAAGAATGTATTCAGGTCTTTTTCAGCAGTCCTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp ATGAGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCAACTAGTCAGGAATGCTaGTTCATATCTGTCTTCAAC +
Preference number: 5 (lower is better)
Translates to: MSNYCSIRRRKRTNQCNPTSQEC*FISVFN
Trigger: GTTGAAGACAGATATGAACAAGCATTCCTGACTAGT...TGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp ATCAGGACTGCTGAAAAAGACCTGAATACATTCTTATTCAATCTGGGGTTATGTTTAAAGCACTTGTTCTaGTACAAATGCCAACCTTCC +
Preference number: 5 (lower is better)
Translates to: IRTAEKDLNTFLFNLGLCLKHLF*YKCQPS
Trigger: GGAAGGTTGGCATTTGTACAAGAACAAGTGCTTTAA...ACATAACCCCAGATTGAATAAGAATGTATTCAGGTCTTTTTCAGCAGTCCTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS-3UTR CAA 90 bp ATGAGCAATTATTGTTCAATTAGGCGAAGAAAAAGGACAAACCAATGCAACCCATTGACATATATAGCCTaGTTTACTGTCACAGGTGTC +
Preference number: 5 (lower is better)
Translates to: MSNYCSIRRRKRTNQCNPLTYIA*FTVTGV
Trigger: GACACCTGTGACAGTAAACAAGGCTATATATGTCAA...TGGGTTGCATTGGTTTGTCCTTTTTCTTCGCCTAATTGAACAATAATTGCTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 90 bp CTGACACCCAGCGGAATTTCTGGGATTCAGCTTCCGGGTTGCAAGTaGCCGTCTGAACTGAGATGGCACTTAGAGCGTCCACGCAGCGCT +
Preference number: 6 (lower is better)
Translates to: LTPSGISGIQLPGCK*PSELRWHLERPRSA
Trigger: AGCGCTGCGTGGACGCTCTAAGTGCCATCTCAGTTCAGACGGCAACTTGCAACCCGGAAGCTGAATCCCAGAAATTCCGCTGGGTGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS TCA 72 bp TTCTGGGATTCAGCTTCCGGGTTGCAAGTTGCCGTCTaGACTGAGATGGCACTTAGAGCGTCCACGCAGCGC +
Preference number: 6 (lower is better)
Translates to: FWDSASGLQVAV*TEMALRASTQR
Trigger: GCGCTGCGTGGACGCTCTAAGTGCCATCTCAGTTCAGACGGCAACTTGCAACCCGGAAGCTGAATCCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS TCA 72 bp CAGCCCACTGCCAACCACTGCGTACACTCAGACTGTTaGGTCCAATCCAGAGTCCCGAGCTCAAGGAACTGG +
Preference number: 6 (lower is better)
Translates to: QPTANHCVHSDC*VQSRVPSSRNW
Trigger: CCAGTTCCTTGAGCTCGGGACTCTGGATTGGACTCAACAGTCTGAGTGTACGCAGTGGTTGGCAGTGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS GCA 72 bp CTTCTTCTCTTCCCTATGGATCCTGTAGCAGTGGCCTaGATAGGGCCACCACTGATTAGGGCAGCCGGTAGG +
Preference number: 6 (lower is better)
Translates to: LLLFPMDPVAVA*IGPPLIRAAGR
Trigger: CCTACCGGCTGCCCTAATCAGTGGTGGCCCTATGCAGGCCACTGCTACAGGATCCATAGGGAAGAGAAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 72 bp CCAGCCCACTGCCAACCACTGCGTACACTCAGACTGTaGAGTCCAATCCAGAGTCCCGAGCTCAAGGAACTG +
Preference number: 6 (lower is better)
Translates to: PAHCQPLRTLRL*SPIQSPELKEL
Trigger: CAGTTCCTTGAGCTCGGGACTCTGGATTGGACTCAACAGTCTGAGTGTACGCAGTGGTTGGCAGTGGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 90 bp GGGCTTCCTCCAGCCCACTGCCAACCACTGCGTACACTCAGACTGTaGAGTCCAATCCAGAGTCCCGAGCTCAAGGAACTGGTTAATCCT +
Preference number: 6 (lower is better)
Translates to: GLPPAHCQPLRTLRL*SPIQSPELKELVNP
Trigger: AGGATTAACCAGTTCCTTGAGCTCGGGACTCTGGATTGGACTCAACAGTCTGAGTGTACGCAGTGGTTGGCAGTGGGCTGGAGGAAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS GCA 72 bp CAGTTCAGATACCGGAATGGGCTTCCTCCAGCCCACTaGCAACCACTGCGTACACTCAGACTGTTGAGTCCA +
Preference number: 6 (lower is better)
Translates to: QFRYRNGLPPAH*QPLRTLRLLSP
Trigger: TGGACTCAACAGTCTGAGTGTACGCAGTGGTTGGCAGTGGGCTGGAGGAAGCCCATTCCGGTATCTGAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS GCA 72 bp TTTCGTCCTGGCATGTCGGCATTCCAGTGTGTAAACTaGACCTGCTCGTCCACAGTCCACCGAAACGTCCCT +
Preference number: 6 (lower is better)
Translates to: FRPGMSAFQCVN*TCSSTVHRNVP
Trigger: AGGGACGTTTCGGTGGACTGTGGACGAGCAGGTGCAGTTTACACACTGGAATGCCGACATGCCAGGACGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 72 bp CAGCTTCCGGGTTGCAAGTTGCCGTCTGAACTGAGATaGCACTTAGAGCGTCCACGCAGCGCTTGTGATCTT +
Preference number: 6 (lower is better)
Translates to: QLPGCKLPSELR*HLERPRSACDL
Trigger: AAGATCACAAGCGCTGCGTGGACGCTCTAAGTGCCATCTCAGTTCAGACGGCAACTTGCAACCCGGAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 72 bp AAAATCCAAACAGCTTGTCTTTGTCGTAGTCAGTGGTaGTTCCACACCAGAGCCATCCGTCCGAGCGCCCGG +
Preference number: 6 (lower is better)
Translates to: KIQTACLCRSQW*FHTRAIRPSAR
Trigger: CCGGGCGCTCGGACGGATGGCTCTGGTGTGGAACCACCACTGACTACGACAAAGACAAGCTGTTTGGATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 72 bp AAACATCCCATAAGCCACCTGCCACTCCGGTTTTCATaGCAACACATCCCGCCTTTCGTCCTGGCATGTCGG +
Preference number: 6 (lower is better)
Translates to: KHPISHLPLRFS*QHIPPFVLACR
Trigger: CCGACATGCCAGGACGAAAGGCGGGATGTGTTGCCATGAAAACCGGAGTGGCAGGTGGCTTATGGGATGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 72 bp GGTTGCTCACAGGCTCTGTCCGCCCAGTATCCATCCTaGCCTTTCATAACCACGCAGTCCTCCTGTCTGTTG +
Preference number: 6 (lower is better)
Translates to: GCSQALSAQYPS*PFITTQSSCLL
Trigger: CAACAGACAGGAGGACTGCGTGGTTATGAAAGGCAAGGATGGATACTGGGCGGACAGAGCCTGTGAGCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 72 bp TACCCCAGTTTTCTGGACATTTGGGTTCAGGAGTTGTaGTGGGCTCTGGTGGGCGAGTCACTCCTTCTGCCC +
Preference number: 6 (lower is better)
Translates to: YPSFLDIWVQEL*WALVGESLLLP
Trigger: GGGCAGAAGGAGTGACTCGCCCACCAGAGCCCACAACAACTCCTGAACCCAAATGTCCAGAAAACTGGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS GCA 72 bp CCTGGCATGTCGGCATTCCAGTGTGTAAACTGCACCTaGTCGTCCACAGTCCACCGAAACGTCCCTTTGTTT +
Preference number: 6 (lower is better)
Translates to: PGMSAFQCVNCT*SSTVHRNVPLF
Trigger: AAACAAAGGGACGTTTCGGTGGACTGTGGACGAGCAGGTGCAGTTTACACACTGGAATGCCGACATGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 72 bp GACAAAATCCAAACAGCTTGTCTTTGTCGTAGTCAGTaGTGGTTCCACACCAGAGCCATCCGTCCGAGCGCC +
Preference number: 6 (lower is better)
Translates to: DKIQTACLCRSQ*WFHTRAIRPSA
Trigger: GGCGCTCGGACGGATGGCTCTGGTGTGGAACCACCACTGACTACGACAAAGACAAGCTGTTTGGATTTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 72 bp CCCAGTTTTCTGGACATTTGGGTTCAGGAGTTGTTGTaGGCTCTGGTGGGCGAGTCACTCCTTCTGCCCAAT +
Preference number: 6 (lower is better)
Translates to: PSFLDIWVQELL*ALVGESLLLPN
Trigger: ATTGGGCAGAAGGAGTGACTCGCCCACCAGAGCCCACAACAACTCCTGAACCCAAATGTCCAGAAAACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 72 bp GTTCTTGTACAAATGCCAACCTTCCTTGCAGCCACCTaGTGTCGTGGGTGTGGTAGGCATGGCAGTGGCATT +
Preference number: 6 (lower is better)
Translates to: VLVQMPTFLAAT*CRGCGRHGSGI
Trigger: AATGCCACTGCCATGCCTACCACACCCACGACACCAGGTGGCTGCAAGGAAGGTTGGCATTTGTACAAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 90 bp AGCCATCCGTCCGAGCGCCCGGCAGAGGTGCAGTCTGCATACCACTaGTTTTCAAACTTGAATGGAAATGCACAGACGGCTCCATTTGCA +
Preference number: 6 (lower is better)
Translates to: SHPSERPAEVQSAYH*FSNLNGNAQTAPFA
Trigger: TGCAAATGGAGCCGTCTGTGCATTTCCATTCAAGTTTGAAAACAAGTGGTATGCAGACTGCACCTCTGCCGGGCGCTCGGACGGATGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 90 bp TACTGGTGGTACCCCAGTTTTCTGGACATTTGGGTTCAGGAGTTGTaGTGGGCTCTGGTGGGCGAGTCACTCCTTCTGCCCAATGTTTGC +
Preference number: 6 (lower is better)
Translates to: YWWYPSFLDIWVQEL*WALVGESLLLPNVC
Trigger: GCAAACATTGGGCAGAAGGAGTGACTCGCCCACCAGAGCCCACAACAACTCCTGAACCCAAATGTCCAGAAAACTGGGGTACCACCAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS TCA 72 bp GGAAACGGGAGAACCATCACTCCAGGTGAACCCCTCTaGAGGACTTCCATAGGTCAGTCCCAACCAAAACAG +
Preference number: 6 (lower is better)
Translates to: GNGRTITPGEPL*RTSIGQSQPKQ
Trigger: CTGTTTTGGTTGGGACTGACCTATGGAAGTCCTTCAGAGGGGTTCACCTGGAGTGATGGTTCTCCCGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS TCA 72 bp GTCACAGGTGTCATCCATCCAGGTCCCTGCCTCTCGTaGATTGCCACCAATCACAACTACACAGTCAGCATC +
Preference number: 6 (lower is better)
Translates to: VTGVIHPGPCLS*IATNHNYTVSI
Trigger: GATGCTGACTGTGTAGTTGTGATTGGTGGCAATTCACGAGAGGCAGGGACCTGGATGGATGACACCTGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS GCA 72 bp ACACCCAGCGGAATTTCTGGGATTCAGCTTCCGGGTTaGAAGTTGCCGTCTGAACTGAGATGGCACTTAGAG +
Preference number: 6 (lower is better)
Translates to: TPSGISGIQLPG*KLPSELRWHLE
Trigger: CTCTAAGTGCCATCTCAGTTCAGACGGCAACTTGCAACCCGGAAGCTGAATCCCAGAAATTCCGCTGGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 72 bp TTCTGGACATTTGGGTTCAGGAGTTGTTGTGGGCTCTaGTGGGCGAGTCACTCCTTCTGCCCAATGTTTGCA +
Preference number: 6 (lower is better)
Translates to: FWTFGFRSCCGL*WASHSFCPMFA
Trigger: TGCAAACATTGGGCAGAAGGAGTGACTCGCCCACCAGAGCCCACAACAACTCCTGAACCCAAATGTCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 72 bp GGTATGACAGAAAACTGGACTCAGCAGCAGTCTCGATaGAAACCAGGGAGGCACCCATTCGAAGGCATTCCA +
Preference number: 6 (lower is better)
Translates to: GMTENWTQQQSR*KPGRHPFEGIP
Trigger: TGGAATGCCTTCGAATGGGTGCCTCCCTGGTTTCCATCGAGACTGCTGCTGAGTCCAGTTTTCTGTCATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 72 bp AGCGGAATTTCTGGGATTCAGCTTCCGGGTTGCAAGTaGCCGTCTGAACTGAGATGGCACTTAGAGCGTCCA +
Preference number: 6 (lower is better)
Translates to: SGISGIQLPGCK*PSELRWHLERP
Trigger: TGGACGCTCTAAGTGCCATCTCAGTTCAGACGGCAACTTGCAACCCGGAAGCTGAATCCCAGAAATTCCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 90 bp GAGCGCCCGGCAGAGGTGCAGTCTGCATACCACTTGTTTTCAAACTaGAATGGAAATGCACAGACGGCTCCATTTGCATTGCCCAGTAAG +
Preference number: 6 (lower is better)
Translates to: ERPAEVQSAYHLFSN*NGNAQTAPFALPSK
Trigger: CTTACTGGGCAATGCAAATGGAGCCGTCTGTGCATTTCCATTCAAGTTTGAAAACAAGTGGTATGCAGACTGCACCTCTGCCGGGCGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS GCA 72 bp GAGCTCAAGGAACTGGTTAATCCTGTGAGGTACATTTaGTCGTGGATCTCCGTGACACTCAGGAGGTCAGCA +
Preference number: 6 (lower is better)
Translates to: ELKELVNPVRYI*SWISVTLRRSA
Trigger: TGCTGACCTCCTGAGTGTCACGGAGATCCACGAGCAAATGTACCTCACAGGATTAACCAGTTCCTTGAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS GCA 72 bp TATCACAATCAGGAGGACCACGGTGACCACTCCTGCTaGTTTAGAAGAGCCCTTGGGTTGAGGATCCATCTT +
Preference number: 6 (lower is better)
Translates to: YHNQEDHGDHSC*FRRALGLRIHL
Trigger: AAGATGGATCCTCAACCCAAGGGCTCTTCTAAAGCAGCAGGAGTGGTCACCGTGGTCCTCCTGATTGTGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 72 bp AGCTGGGAGAAGATGAAGTCAAACTCCTCAATGCTGTaGATACTTGCCAGGTCCCCACCCTCCTTCCTACAA +
Preference number: 6 (lower is better)
Translates to: SWEKMKSNSSML*ILARSPPSFLQ
Trigger: TTGTAGGAAGGAGGGTGGGGACCTGGCAAGTATCCACAGCATTGAGGAGTTTGACTTCATCTTCTCCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 72 bp TCAGGAGGTCAGCATTCTGCTGCTTGCAGCTTGCCCTaGCCTGATGCCAGGTTAAAGCAGACTTGGAGTTTA +
Preference number: 6 (lower is better)
Translates to: SGGQHSAACSLP*PDARLKQTWSL
Trigger: TAAACTCCAAGTCTGCTTTAACCTGGCATCAGGCAAGGGCAAGCTGCAAGCAGCAGAATGCTGACCTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 72 bp CAGGTGTCATCCATCCAGGTCCCTGCCTCTCGTGAATaGCCACCAATCACAACTACACAGTCAGCATCTTCA +
Preference number: 6 (lower is better)
Translates to: QVSSIQVPASRE*PPITTTQSASS
Trigger: TGAAGATGCTGACTGTGTAGTTGTGATTGGTGGCAATTCACGAGAGGCAGGGACCTGGATGGATGACACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 72 bp GGTGACCACTCCTGCTGCTTTAGAAGAGCCCTTGGGTaGAGGATCCATCTTCCTTTGGTCAGCTTTGGTTGT +
Preference number: 6 (lower is better)
Translates to: GDHSCCFRRALG*RIHLPLVSFGC
Trigger: ACAACCAAAGCTGACCAAAGGAAGATGGATCCTCAACCCAAGGGCTCTTCTAAAGCAGCAGGAGTGGTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS TCA 72 bp CCACTGATTAGGGCAGCCGGTAGGCACATCGCTTGCTaGGGGAATGATAAATGGGTTCAAGGTATTGTTTCC +
Preference number: 6 (lower is better)
Translates to: PLIRAAGRHIAC*GNDKWVQGIVS
Trigger: GGAAACAATACCTTGAACCCATTTATCATTCCCTCAGCAAGCGATGTGCCTACCGGCTGCCCTAATCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS TCA 72 bp GCAGTCTGTTCTGACTCTGGACACTTGCCAGGCAGTTaGGGAGGTTCAGTAGCAGGGATTTCGTCTGATTTT +
Preference number: 6 (lower is better)
Translates to: AVCSDSGHLPGS*GGSVAGISSDF
Trigger: AAAATCAGACGAAATCCCTGCTACTGAACCTCCTCAACTGCCTGGCAAGTGTCCAGAGTCAGAACAGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS TCA 72 bp CATTCCGTTCACCAGAGGGATCGCCTGTTTTCCAGTTaGCAAAGGAGACAGGATTGTCGTTCAACCAAAGCC +
Preference number: 6 (lower is better)
Translates to: HSVHQRDRLFSS*QRRQDCRSTKA
Trigger: GGCTTTGGTTGAACGACAATCCTGTCTCCTTTGTCAACTGGAAAACAGGCGATCCCTCTGGTGAACGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS TCA 72 bp GTGACCACTCCTGCTGCTTTAGAAGAGCCCTTGGGTTaGGGATCCATCTTCCTTTGGTCAGCTTTGGTTGTA +
Preference number: 6 (lower is better)
Translates to: VTTPAALEEPLG*GSIFLWSALVV
Trigger: TACAACCAAAGCTGACCAAAGGAAGATGGATCCTCAACCCAAGGGCTCTTCTAAAGCAGCAGGAGTGGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS GCA 72 bp AGGTGTCATCCATCCAGGTCCCTGCCTCTCGTGAATTaGCACCAATCACAACTACACAGTCAGCATCTTCAT +
Preference number: 6 (lower is better)
Translates to: RCHPSRSLPLVN*HQSQLHSQHLH
Trigger: ATGAAGATGCTGACTGTGTAGTTGTGATTGGTGGCAATTCACGAGAGGCAGGGACCTGGATGGATGACACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 72 bp AAGGAACTGGTTAATCCTGTGAGGTACATTTGCTCGTaGATCTCCGTGACACTCAGGAGGTCAGCATTCTGC +
Preference number: 6 (lower is better)
Translates to: KELVNPVRYICS*ISVTLRRSAFC
Trigger: GCAGAATGCTGACCTCCTGAGTGTCACGGAGATCCACGAGCAAATGTACCTCACAGGATTAACCAGTTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 72 bp AACCACGCAGTCCTCCTGTCTGTTGTTCTCATGGCTTaGCTCTCCAGGAAGCCATTTAGTAAATGTCACTGG +
Preference number: 6 (lower is better)
Translates to: NHAVLLSVVLMA*LSRKPFSKCHW
Trigger: CCAGTGACATTTACTAAATGGCTTCCTGGAGAGCCAAGCCATGAGAACAACAGACAGGAGGACTGCGTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 72 bp CCTTGTCCAGCTGTCCACAGGAACATGTGTTCTGCGTaGATATCATTCAGCCCAGTCCAGGCATTGAAAGTG +
Preference number: 6 (lower is better)
Translates to: PCPAVHRNMCSA*ISFSPVQALKV
Trigger: CACTTTCAATGCCTGGACTGGGCTGAATGATATCAACGCAGAACACATGTTCCTGTGGACAGCTGGACAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 90 bp CAGCTCATGGTAGCTTCCACTGCTCGTAATCAGCCTCCAAATCACTaGCTGTTCATCTTTACTCTTGATGCTCGCCAGCTCTCCACCTAT +
Preference number: 6 (lower is better)
Translates to: QLMVASTARNQPPNH*LFIFTLDARQLSTY
Trigger: ATAGGTGGAGAGCTGGCGAGCATCAAGAGTAAAGATGAACAGCAAGTGATTTGGAGGCTGATTACGAGCAGTGGAAGCTACCATGAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS TCA 72 bp TCTCCAGTAGCCATCAACATCCATGTAAACACATGCTaGCTTAAGCTTCGGCTCGTCAGCACCCCAGTTAGT +
Preference number: 6 (lower is better)
Translates to: SPVAINIHVNTC*LKLRLVSTPVS
Trigger: ACTAACTGGGGTGCTGACGAGCCGAAGCTTAAGTCAGCATGTGTTTACATGGATGTTGATGGCTACTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS GCA 72 bp AACTCCTTGTCCAGCTGTCCACAGGAACATGTGTTCTaGGTTGATATCATTCAGCCCAGTCCAGGCATTGAA +
Preference number: 6 (lower is better)
Translates to: NSLSSCPQEHVF*VDIIQPSPGIE
Trigger: TTCAATGCCTGGACTGGGCTGAATGATATCAACGCAGAACACATGTTCCTGTGGACAGCTGGACAAGGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS GCA 72 bp GTGCAACGCATGCCTTTTCTTATAAAAGAAATAGGCTaGAACGCCGGCACCTATCACAATCAGGAGGACCAC +
Preference number: 6 (lower is better)
Translates to: VQRMPFLIKEIG*NAGTYHNQEDH
Trigger: GTGGTCCTCCTGATTGTGATAGGTGCCGGCGTTGCAGCCTATTTCTTTTATAAGAAAAGGCATGCGTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 72 bp CCAATCCACAGCTCATCATTTGGCTCATATCCGAGCTaGGAGAAGATGAAGTCAAACTCCTCAATGCTGTGG +
Preference number: 6 (lower is better)
Translates to: PIHSSSFGSYPS*EKMKSNSSMLW
Trigger: CCACAGCATTGAGGAGTTTGACTTCATCTTCTCCCAGCTCGGATATGAGCCAAATGATGAGCTGTGGATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 72 bp GTAGCTTCCACTGCTCGTAATCAGCCTCCAAATCACTaGCTGTTCATCTTTACTCTTGATGCTCGCCAGCTC +
Preference number: 6 (lower is better)
Translates to: VASTARNQPPNH*LFIFTLDARQL
Trigger: GAGCTGGCGAGCATCAAGAGTAAAGATGAACAGCAAGTGATTTGGAGGCTGATTACGAGCAGTGGAAGCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 72 bp TCATTCCGTTCACCAGAGGGATCGCCTGTTTTCCAGTaGACAAAGGAGACAGGATTGTCGTTCAACCAAAGC +
Preference number: 6 (lower is better)
Translates to: SFRSPEGSPVFQ*TKETGLSFNQS
Trigger: GCTTTGGTTGAACGACAATCCTGTCTCCTTTGTCAACTGGAAAACAGGCGATCCCTCTGGTGAACGGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 90 bp CAGTATCCATCCTTGCCTTTCATAACCACGCAGTCCTCCTGTCTGTaGTTCTCATGGCTTGGCTCTCCAGGAAGCCATTTAGTAAATGTC +
Preference number: 6 (lower is better)
Translates to: QYPSLPFITTQSSCL*FSWLGSPGSHLVNV
Trigger: GACATTTACTAAATGGCTTCCTGGAGAGCCAAGCCATGAGAACAACAGACAGGAGGACTGCGTGGTTATGAAAGGCAAGGATGGATACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 90 bp TCACCAGAGGGATCGCCTGTTTTCCAGTTGACAAAGGAGACAGGATaGTCGTTCAACCAAAGCCACTTCCCTTCAACATTTCGGAACATG +
Preference number: 6 (lower is better)
Translates to: SPEGSPVFQLTKETG*SFNQSHFPSTFRNM
Trigger: CATGTTCCGAAATGTTGAAGGGAAGTGGCTTTGGTTGAACGACAATCCTGTCTCCTTTGTCAACTGGAAAACAGGCGATCCCTCTGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 90 bp ACTACACAATCATTCCGTTCACCAGAGGGATCGCCTGTTTTCCAGTaGACAAAGGAGACAGGATTGTCGTTCAACCAAAGCCACTTCCCT +
Preference number: 6 (lower is better)
Translates to: TTQSFRSPEGSPVFQ*TKETGLSFNQSHFP
Trigger: AGGGAAGTGGCTTTGGTTGAACGACAATCCTGTCTCCTTTGTCAACTGGAAAACAGGCGATCCCTCTGGTGAACGGAATGATTGTGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS TCA 72 bp TCTGATATTCACTTTTCGAATCACAGGCATACAGGGTaGCGGAAGCCCAGTCAGTTTTTGATGGCACTCCCA +
Preference number: 6 (lower is better)
Translates to: SDIHFSNHRHTG*RKPSQFLMALP
Trigger: TGGGAGTGCCATCAAAAACTGACTGGGCTTCCGTCACCCTGTATGCCTGTGATTCGAAAAGTGAATATCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS TCA 72 bp GCTCATCATTTGGCTCATATCCGAGCTGGGAGAAGATaGAGTCAAACTCCTCAATGCTGTGGATACTTGCCA +
Preference number: 6 (lower is better)
Translates to: AHHLAHIRAGRR*SQTPQCCGYLP
Trigger: TGGCAAGTATCCACAGCATTGAGGAGTTTGACTTCATCTTCTCCCAGCTCGGATATGAGCCAAATGATGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 72 bp GGTGCAGTCTGCATACCACTTGTTTTCAAACTTGAATaGAAATGCACAGACGGCTCCATTTGCATTGCCCAG +
Preference number: 6 (lower is better)
Translates to: GAVCIPLVFKLE*KCTDGSICIAQ
Trigger: CTGGGCAATGCAAATGGAGCCGTCTGTGCATTTCCATTCAAGTTTGAAAACAAGTGGTATGCAGACTGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 72 bp TTCATAACCACGCAGTCCTCCTGTCTGTTGTTCTCATaGCTTGGCTCTCCAGGAAGCCATTTAGTAAATGTC +
Preference number: 6 (lower is better)
Translates to: FITTQSSCLLFS*LGSPGSHLVNV
Trigger: GACATTTACTAAATGGCTTCCTGGAGAGCCAAGCCATGAGAACAACAGACAGGAGGACTGCGTGGTTATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 72 bp AGGATAGCCTTTCCCCCAGTTTGTATAATGAACTCCTaGTCCAGCTGTCCACAGGAACATGTGTTCTGCGTT +
Preference number: 6 (lower is better)
Translates to: RIAFPPVCIMNS*SSCPQEHVFCV
Trigger: AACGCAGAACACATGTTCCTGTGGACAGCTGGACAAGGAGTTCATTATACAAACTGGGGGAAAGGCTATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 72 bp TACTTCTTCTTCCACCAGGATAGCCTTTCCCCCAGTTaGTATAATGAACTCCTTGTCCAGCTGTCCACAGGA +
Preference number: 6 (lower is better)
Translates to: YFFFHQDSLSPS*YNELLVQLSTG
Trigger: TCCTGTGGACAGCTGGACAAGGAGTTCATTATACAAACTGGGGGAAAGGCTATCCTGGTGGAAGAAGAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 90 bp TTGTTTTCAAACTTGAATGGAAATGCACAGACGGCTCCATTTGCATaGCCCAGTAAGGAGTACATGGCTTCATATCCTCTCGAGCACAGG +
Preference number: 6 (lower is better)
Translates to: LFSNLNGNAQTAPFA*PSKEYMASYPLEHR
Trigger: CCTGTGCTCGAGAGGATATGAAGCCATGTACTCCTTACTGGGCAATGCAAATGGAGCCGTCTGTGCATTTCCATTCAAGTTTGAAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 90 bp CTGCTCGTAATCAGCCTCCAAATCACTTGCTGTTCATCTTTACTCTaGATGCTCGCCAGCTCTCCACCTATAGCTTTGCAAAAATCTCGA +
Preference number: 6 (lower is better)
Translates to: LLVISLQITCCSSLL*MLASSPPIALQKSR
Trigger: TCGAGATTTTTGCAAAGCTATAGGTGGAGAGCTGGCGAGCATCAAGAGTAAAGATGAACAGCAAGTGATTTGGAGGCTGATTACGAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 90 bp TCTTCCACCAGGATAGCCTTTCCCCCAGTTTGTATAATGAACTCCTaGTCCAGCTGTCCACAGGAACATGTGTTCTGCGTTGATATCATT +
Preference number: 6 (lower is better)
Translates to: SSTRIAFPPVCIMNS*SSCPQEHVFCVDII
Trigger: AATGATATCAACGCAGAACACATGTTCCTGTGGACAGCTGGACAAGGAGTTCATTATACAAACTGGGGGAAAGGCTATCCTGGTGGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 90 bp AAGATAGGCTACTTCTTCTTCCACCAGGATAGCCTTTCCCCCAGTTaGTATAATGAACTCCTTGTCCAGCTGTCCACAGGAACATGTGTT +
Preference number: 6 (lower is better)
Translates to: KIGYFFFHQDSLSPS*YNELLVQLSTGTCV
Trigger: AACACATGTTCCTGTGGACAGCTGGACAAGGAGTTCATTATACAAACTGGGGGAAAGGCTATCCTGGTGGAAGAAGAAGTAGCCTATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 72 bp GCTTGGCTCTCCAGGAAGCCATTTAGTAAATGTCACTaGGGTTCCATCACTCCACTCAAAGTACATCTGAAT +
Preference number: 6 (lower is better)
Translates to: AWLSRKPFSKCH*GSITPLKVHLN
Trigger: ATTCAGATGTACTTTGAGTGGAGTGATGGAACCCCAGTGACATTTACTAAATGGCTTCCTGGAGAGCCAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 72 bp ATAGCTGCTTTTCCCATATGTAACAAAGCCATCTTTTaGAGTAGTGGTTGGAGAAACAGGCAGGGAAGGGTC +
Preference number: 6 (lower is better)
Translates to: IAAFPICNKAIF*SSGWRNRQGRV
Trigger: GACCCTTCCCTGCCTGTTTCTCCAACCACTACTCCAAAAGATGGCTTTGTTACATATGGGAAAAGCAGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 72 bp CGCACCCTCCATCTATCCGTCCAAGTATATTCATTATaGGTCAAGTTGCTGTTCAGGGCAATCCATATGGGT +
Preference number: 6 (lower is better)
Translates to: RTLHLSVQVYSL*VKLLFRAIHMG
Trigger: ACCCATATGGATTGCCCTGAACAGCAACTTGACCAATAATGAATATACTTGGACGGATAGATGGAGGGTGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 72 bp GGATCGCCTGTTTTCCAGTTGACAAAGGAGACAGGATaGTCGTTCAACCAAAGCCACTTCCCTTCAACATTT +
Preference number: 6 (lower is better)
Translates to: GSPVFQLTKETG*SFNQSHFPSTF
Trigger: AAATGTTGAAGGGAAGTGGCTTTGGTTGAACGACAATCCTGTCTCCTTTGTCAACTGGAAAACAGGCGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 90 bp CCAGGCATTGAAAGTGGAGTCTCTCATGTGATAGGTAACAAATGCTaGCTCTTGTGCATTTTCTATGGACACCAGGTTTCCTTTCAGTCC +
Preference number: 6 (lower is better)
Translates to: PGIESGVSHVIGNKC*LLCIFYGHQVSFQS
Trigger: GGACTGAAAGGAAACCTGGTGTCCATAGAAAATGCACAAGAGCAAGCATTTGTTACCTATCACATGAGAGACTCCACTTTCAATGCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS TCA 72 bp CTTTCGTGTCACTTGTTCCTGGACTCAGATTACTGTTaGAGTAGAGAGTGTTTTCAAAGGTGGCCTCTTGAG +
Preference number: 6 (lower is better)
Translates to: LSCHLFLDSDYC*SRECFQRWPLE
Trigger: CTCAAGAGGCCACCTTTGAAAACACTCTCTACTTCAACAGTAATCTGAGTCCAGGAACAAGTGACACGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 72 bp GCACCCTCCATCTATCCGTCCAAGTATATTCATTATTaGTCAAGTTGCTGTTCAGGGCAATCCATATGGGTA +
Preference number: 6 (lower is better)
Translates to: APSIYPSKYIHY*SSCCSGQSIWV
Trigger: TACCCATATGGATTGCCCTGAACAGCAACTTGACCAATAATGAATATACTTGGACGGATAGATGGAGGGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 90 bp CGCACCCTCCATCTATCCGTCCAAGTATATTCATTATTGGTCAAGTaGCTGTTCAGGGCAATCCATATGGGTACATTAAATGGGTGCATT +
Preference number: 6 (lower is better)
Translates to: RTLHLSVQVYSLLVK*LFRAIHMGTLNGCI
Trigger: AATGCACCCATTTAATGTACCCATATGGATTGCCCTGAACAGCAACTTGACCAATAATGAATATACTTGGACGGATAGATGGAGGGTGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS TCA 72 bp AAGCCTTTTCATTTGTGCATGTGTGGTTTGCATCAGTaGAGGTGGATAGAGTGGATCCAATCAAGTAGCAGT +
Preference number: 6 (lower is better)
Translates to: KPFHLCMCGLHQ*RWIEWIQSSSS
Trigger: ACTGCTACTTGATTGGATCCACTCTATCCACCTTCACTGATGCAAACCACACATGCACAAATGAAAAGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS GCA 72 bp GGATCTTTGTTCCATAATCTCTCGCTTCCCTCAAAGTaGAATGGACAAAATCCAAACAGCTTGTCTTTGTCG +
Preference number: 6 (lower is better)
Translates to: GSLFHNLSLPSK*NGQNPNSLSLS
Trigger: CGACAAAGACAAGCTGTTTGGATTTTGTCCATTGCACTTTGAGGGAAGCGAGAGATTATGGAACAAAGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS GCA 72 bp GTCTCTCATGTGATAGGTAACAAATGCTTGCTCTTGTaGATTTTCTATGGACACCAGGTTTCCTTTCAGTCC +
Preference number: 6 (lower is better)
Translates to: VSHVIGNKCLLL*IFYGHQVSFQS
Trigger: GGACTGAAAGGAAACCTGGTGTCCATAGAAAATGCACAAGAGCAAGCATTTGTTACCTATCACATGAGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CCA 72 bp GATGTTGCCCATGAGATCTTTCGTGTCACTTGTTCCTaGACTCAGATTACTGTTGAAGTAGAGAGTGTTTTC +
Preference number: 6 (lower is better)
Translates to: DVAHEIFRVTCS*TQITVEVESVF
Trigger: GAAAACACTCTCTACTTCAACAGTAATCTGAGTCCAGGAACAAGTGACACGAAAGATCTCATGGGCAACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 72 bp GGAGTCTCTCATGTGATAGGTAACAAATGCTTGCTCTaGTGCATTTTCTATGGACACCAGGTTTCCTTTCAG +
Preference number: 6 (lower is better)
Translates to: GVSHVIGNKCLL*CIFYGHQVSFQ
Trigger: CTGAAAGGAAACCTGGTGTCCATAGAAAATGCACAAGAGCAAGCATTTGTTACCTATCACATGAGAGACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 72 bp GAAAGTGGAGTCTCTCATGTGATAGGTAACAAATGCTaGCTCTTGTGCATTTTCTATGGACACCAGGTTTCC +
Preference number: 6 (lower is better)
Translates to: ESGVSHVIGNKC*LLCIFYGHQVS
Trigger: GGAAACCTGGTGTCCATAGAAAATGCACAAGAGCAAGCATTTGTTACCTATCACATGAGAGACTCCACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 90 bp GGACATGCCAGGGTCACCTTTCAGCTCACCACAATATTCAACATTTaGGTAATTATTTGGTTCACCGTAAGCCCAATTTTCATAGGAAAC +
Preference number: 6 (lower is better)
Translates to: GHARVTFQLTTIFNI*VIIWFTVSPIFIGN
Trigger: GTTTCCTATGAAAATTGGGCTTACGGTGAACCAAATAATTACCAAAATGTTGAATATTGTGGTGAGCTGAAAGGTGACCCTGGCATGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 90 bp GAATTTGTGTACATCGTTACACAGTTTTCATCATCATTTGCAAAGTaGGGTTCTCCTGTAGCCCAAGCCACAAAATCTACTTTGCTCCCA +
Preference number: 6 (lower is better)
Translates to: EFVYIVTQFSSSFAK*GSPVAQATKSTLLP
Trigger: TGGGAGCAAAGTAGATTTTGTGGCTTGGGCTACAGGAGAACCCAACTTTGCAAATGATGATGAAAACTGTGTAACGATGTACACAAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 90 bp ATTGAAAGTGGAGTCTCTCATGTGATAGGTAACAAATGCTTGCTCTaGTGCATTTTCTATGGACACCAGGTTTCCTTTCAGTCCTTTGCA +
Preference number: 6 (lower is better)
Translates to: IESGVSHVIGNKCLL*CIFYGHQVSFQSFA
Trigger: TGCAAAGGACTGAAAGGAAACCTGGTGTCCATAGAAAATGCACAAGAGCAAGCATTTGTTACCTATCACATGAGAGACTCCACTTTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 90 bp TTAGTGTACCGCACCCTCCATCTATCCGTCCAAGTATATTCATTATaGGTCAAGTTGCTGTTCAGGGCAATCCATATGGGTACATTAAAT +
Preference number: 6 (lower is better)
Translates to: LVYRTLHLSVQVYSL*VKLLFRAIHMGTLN
Trigger: ATTTAATGTACCCATATGGATTGCCCTGAACAGCAACTTGACCAATAATGAATATACTTGGACGGATAGATGGAGGGTGCGGTACACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 72 bp TACATCGTTACACAGTTTTCATCATCATTTGCAAAGTaGGGTTCTCCTGTAGCCCAAGCCACAAAATCTACT +
Preference number: 6 (lower is better)
Translates to: YIVTQFSSSFAK*GSPVAQATKST
Trigger: AGTAGATTTTGTGGCTTGGGCTACAGGAGAACCCAACTTTGCAAATGATGATGAAAACTGTGTAACGATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 72 bp ACTGTTGAAGTAGAGAGTGTTTTCAAAGGTGGCCTCTaGAGGTATGTGCAACGCATGCCTTTTCTTATAAAA +
Preference number: 6 (lower is better)
Translates to: TVEVESVFKGGL*RYVQRMPFLIK
Trigger: TTTTATAAGAAAAGGCATGCGTTGCACATACCTCAAGAGGCCACCTTTGAAAACACTCTCTACTTCAACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS TCA 72 bp ATCCATCTTCCTTTGGTCAGCTTTGGTTGTAATGGATaGGTGTGTAGTTACAGGATCAATAATTTTTGGCAT +
Preference number: 6 (lower is better)
Translates to: IHLPLVSFGCNG*VCSYRINNFWH
Trigger: ATGCCAAAAATTATTGATCCTGTAACTACACACTCATCCATTACAACCAAAGCTGACCAAAGGAAGATGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS CAA 72 bp CATCTATCCGTCCAAGTATATTCATTATTGGTCAAGTaGCTGTTCAGGGCAATCCATATGGGTACATTAAAT +
Preference number: 6 (lower is better)
Translates to: HLSVQVYSLLVK*LFRAIHMGTLN
Trigger: ATTTAATGTACCCATATGGATTGCCCTGAACAGCAACTTGACCAATAATGAATATACTTGGACGGATAGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4
CDS GCA 72 bp TCCATGCTGATTAACATGCCAATAAAATATGGTGACTaGCCACCATTCTTGTTTATATATTTCCATAGAAAC +
Preference number: 6 (lower is better)
Translates to: SMLINMPIKYGD*PPFLFIYFHRN
Trigger: GTTTCTATGGAAATATATAAACAAGAATGGTGGGCAGTCACCATATTTTATTGGCATGTTAATCAGCATGGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028045.4