Pregenerated sensors for MRAS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032470Ensembl transcript IDs: ENSMUST00000035045.15, ENSMUST00000119472.8, ENSMUST00000122384.9
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCTGTCTCCTGGGAGAGGCAGCAAAGCCAGCCCCGGCCTGCTTCTaGCCCCTCCTCCCTCATTCCCTTCCAATGCCCAGTCCAGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: PCLLGEAAKPAPACF*PLLPHSLPMPSPEP Trigger: TGGCTCTGGACTGGGCATTGGAAGGGAATGAGGGAGGAGGGGGCAGAAGCAGGCCGGGGCTGGCTTTGCTGCCTCTCCCAGGAGACAGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| 3UTR TCA 90 bp | GAGTCTCCACTCGGCACAGGAGAGGCGCTGGCTGGTCCACGGAAGTaGGGGTGTGCCGGTAGCAGGTGGCAGGACATGGCTTCTCTGGCA | + |
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Preference number: 1 (lower is better) Translates to: ESPLGTGEALAGPRK*GCAGSRWQDMASLA Trigger: TGCCAGAGAAGCCATGTCCTGCCACCTGCTACCGGCACACCCTCACTTCCGTGGACCAGCCAGCGCCTCTCCTGTGCCGAGTGGAGACTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR TCA 90 bp | GCTGGACACCCTACTCGGTGCCTGGTTTCCTTGGATTTCCTTCCGTaGGTTCCCTTCTCCACACTGGCCCAGCCCCCTGGTGGGAGCCTC | + |
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Preference number: 1 (lower is better) Translates to: AGHPTRCLVSLDFLP*VPFSTLAQPPGGSL Trigger: GAGGCTCCCACCAGGGGGCTGGGCCAGTGTGGAGAAGGGAACTCACGGAAGGAAATCCAAGGAAACCAGGCACCGAGTAGGGTGTCCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR CCA 90 bp | TTTCCTTCCGTGAGTTCCCTTCTCCACACTGGCCCAGCCCCCTGGTaGGAGCCTCCGTTCTGCAAGGTGAGCTGGCAGATGCCCTCACTC | + |
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Preference number: 1 (lower is better) Translates to: FPSVSSLLHTGPAPW*EPPFCKVSWQMPSL Trigger: GAGTGAGGGCATCTGCCAGCTCACCTTGCAGAACGGAGGCTCCCACCAGGGGGCTGGGCCAGTGTGGAGAAGGGAACTCACGGAAGGAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR GCA 90 bp | GGACATGGGCAGTTTAGAATGGATGCCCTGGATGACGAACCTGAATaGACTGCTTCTGCTGAGAGGGGTGGGGGCGCTGGGAGCCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: GHGQFRMDALDDEPE*TASAERGGGAGSLP Trigger: AGGGAGGCTCCCAGCGCCCCCACCCCTCTCAGCAGAAGCAGTGCATTCAGGTTCGTCATCCAGGGCATCCATTCTAAACTGCCCATGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR CCA 90 bp | CTGACCCTCCCTTCCATCTTTCCTCTCTCTGGGCTGCAGTGGCTATaGGTGTGGCTTAGGGAGCCCAGGGCTGGAGAAAGCCTGGTTCTT | + |
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Preference number: 1 (lower is better) Translates to: LTLPSIFPLSGLQWL*VWLREPRAGESLVL Trigger: AAGAACCAGGCTTTCTCCAGCCCTGGGCTCCCTAAGCCACACCCATAGCCACTGCAGCCCAGAGAGAGGAAAGATGGAAGGGAGGGTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR TCA 90 bp | CATGGCTTCTCTGGCAGTGGCTGCTGCCCTGAGTGTAGAGCATCCTaGCCCTCCCTTCCATCTTTCCTCTCTCTGGGCTGCAGTGGCTAT | + |
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Preference number: 1 (lower is better) Translates to: HGFSGSGCCPECRAS*PSLPSFLSLGCSGY Trigger: ATAGCCACTGCAGCCCAGAGAGAGGAAAGATGGAAGGGAGGGTCAGGATGCTCTACACTCAGGGCAGCAGCCACTGCCAGAGAAGCCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR CCA 90 bp | GGGGCTTTGGGGTTAGAGCTGGCATGGTCAGTGGGTCATGTCTCCTaGCAGGCAAGACAGGTCACACGCATCCAATCAGGTACTCCACAG | + |
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Preference number: 1 (lower is better) Translates to: GALGLELAWSVGHVS*QARQVTRIQSGTPQ Trigger: CTGTGGAGTACCTGATTGGATGCGTGTGACCTGTCTTGCCTGCCAGGAGACATGACCCACTGACCATGCCAGCTCTAACCCCAAAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR CCA 90 bp | CTCCCTTCCATCTTTCCTCTCTCTGGGCTGCAGTGGCTATGGGTGTaGCTTAGGGAGCCCAGGGCTGGAGAAAGCCTGGTTCTTTTCATG | + |
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Preference number: 1 (lower is better) Translates to: LPSIFPLSGLQWLWV*LREPRAGESLVLFM Trigger: CATGAAAAGAACCAGGCTTTCTCCAGCCCTGGGCTCCCTAAGCCACACCCATAGCCACTGCAGCCCAGAGAGAGGAAAGATGGAAGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR TCA 90 bp | CACGCATCCAATCAGGTACTCCACAGCAAGAGCCATGGAAGGGTGTaGGGAGCTCCTAAGGGGAGCATCCAGATGTTCCCTGTGTGGCAT | + |
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Preference number: 1 (lower is better) Translates to: HASNQVLHSKSHGRV*GAPKGSIQMFPVWH Trigger: ATGCCACACAGGGAACATCTGGATGCTCCCCTTAGGAGCTCCTCACACCCTTCCATGGCTCTTGCTGTGGAGTACCTGATTGGATGCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR CCA 90 bp | CTGGAGTGTCATCTACCCATGCCACACGTGGGGGAAACAGGATTGTaGAAGATGAAAGCCCTGGACCAGAGATGGCCAGAAGTCGGCCAT | + |
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Preference number: 1 (lower is better) Translates to: LECHLPMPHVGETGL*KMKALDQRWPEVGH Trigger: ATGGCCGACTTCTGGCCATCTCTGGTCCAGGGCTTTCATCTTCCACAATCCTGTTTCCCCCACGTGTGGCATGGGTAGATGACACTCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR TCA 90 bp | GTCATCTACCCATGCCACACGTGGGGGAAACAGGATTGTGGAAGATaGAAGCCCTGGACCAGAGATGGCCAGAAGTCGGCCATTTTGTCC | + |
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Preference number: 1 (lower is better) Translates to: VIYPCHTWGKQDCGR*KPWTRDGQKSAILS Trigger: GGACAAAATGGCCGACTTCTGGCCATCTCTGGTCCAGGGCTTTCATCTTCCACAATCCTGTTTCCCCCACGTGTGGCATGGGTAGATGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR GCA 90 bp | GTCAACAAGATGTCCAGGCATCACTCTCGCTCCTCACACGACAACTaGCACCTGCTAATACTGTCACGCAAAGGGCTCATTGTTTCAAGT | + |
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Preference number: 1 (lower is better) Translates to: VNKMSRHHSRSSHDN*HLLILSRKGLIVSS Trigger: ACTTGAAACAATGAGCCCTTTGCGTGACAGTATTAGCAGGTGGCAGTTGTCGTGTGAGGAGCGAGAGTGATGCCTGGACATCTTGTTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR CCA 90 bp | GGACAGGGAGGAAGCTTGCTCATGGCTTGTCTGGTGCGTTGTATGTaGGTAAGCACTTCCATAGCAAACCAGCCCTATGGAGTTAAAAGA | + |
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Preference number: 1 (lower is better) Translates to: GQGGSLLMACLVRCM*VSTSIANQPYGVKR Trigger: TCTTTTAACTCCATAGGGCTGGTTTGCTATGGAAGTGCTTACCCACATACAACGCACCAGACAAGCCATGAGCAAGCTTCCTCCCTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| 3UTR GCA 90 bp | TTTGGCACTGCTAGGAACACTCGGTTAAGAAGACAACAGCCCTATTaGAGACATTTATCAGAGGTCTGCCAAAGACTTGGGGCTTCGCCA | + |
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Preference number: 1 (lower is better) Translates to: FGTARNTRLRRQQPY*RHLSEVCQRLGASP Trigger: TGGCGAAGCCCCAAGTCTTTGGCAGACCTCTGATAAATGTCTGCAATAGGGCTGTTGTCTTCTTAACCGAGTGTTCCTAGCAGTGCCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR GCA 90 bp | CTAGCAAAAGCGTCAGTCATTTCCTTCTGTAGCAGAGTTGTCCCTTaGATGGGGCCTTCTGTCCTGATGACCCTGCGTGTGAACAATTTA | + |
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Preference number: 1 (lower is better) Translates to: LAKASVISFCSRVVP*MGPSVLMTLRVNNL Trigger: TAAATTGTTCACACGCAGGGTCATCAGGACAGAAGGCCCCATGCAAGGGACAACTCTGCTACAGAAGGAAATGACTGACGCTTTTGCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR CCA 90 bp | TCTGAGATAATAGTATTGAGCACTTTCAGTTCAGAGCTTTCTGGATaGTGTCACATCCACCTCCTTGAACATGTCCCTAAGTTTGTGTCA | + |
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Preference number: 1 (lower is better) Translates to: SEIIVLSTFSSELSG*CHIHLLEHVPKFVS Trigger: TGACACAAACTTAGGGACATGTTCAAGGAGGTGGATGTGACACCATCCAGAAAGCTCTGAACTGAAAGTGCTCAATACTATTATCTCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR-3UTR CCA 90 bp | GCTGGGAGCCTCCCTTCTGGTCAGCTGTGTGACTCACTCCTCAGGGCTTTGGTCCTCAGACACTGGGGATaGGACAGGGAGGAAGCTTGC | + |
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Preference number: 2 (lower is better) Translates to: AGSLPSGQLCDSLLRALVLRHWG*DREEAC Trigger: GCAAGCTTCCTCCCTGTCCCATCCCCAGTGTCTGAG...GACCAAAGCCCTGAGGAGTGAGTCACACAGCTGACCAGAAGGGAGGCTCCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR-3UTR GCA 90 bp | CCCACCAAGAGACTGGGAACTGGGCTCAGTCAACACACAAAAGGTTTGGAAGCTGCCCCGGCCTGCTTCTaGCCCCTCCTCCCTCATTCC | + |
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Preference number: 2 (lower is better) Translates to: PTKRLGTGLSQHTKGLEAAPACF*PLLPHS Trigger: GGAATGAGGGAGGAGGGGGCAGAAGCAGGCCGGGGC...AGCTTCCAAACCTTTTGTGTGTTGACTGAGCCCAGTTCCCAGTCTCTTGGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| 3UTR-3UTR CCA 90 bp | CCACTAGCAGCACCAGAGAGGGAGGAGTGCATTGTGGCGGGAGGTGTCCCTGCTGCCTCTCATCCAGGATaGAGTTTGGCACTGCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: PLAAPEREECIVAGGVPAASHPG*SLALLG Trigger: TCCTAGCAGTGCCAAACTCCATCCTGGATGAGAGGC...AGCAGGGACACCTCCCGCCACAATGCACTCCTCCCTCTCTGGTGCTGCTAGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR-3UTR GCA 90 bp | GGTAATGGTCAGCTGACTCGGGTGGAAATGGCTTCAGGTCCTGGGGCTTCTGAGCTGGCAGTTCACGGTTaGTATGCCCAGGGCTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: GNGQLTRVEMASGPGASELAVHG*YAQGFR Trigger: CCTGAAGCCCTGGGCATAGCAACCGTGAACTGCCAG...CTCAGAAGCCCCAGGACCTGAAGCCATTTCCACCCGAGTCAGCTGACCATTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR-3UTR GCA 90 bp | AGCCCTATGGAGTTAAAAGAAACAAGCCCACCAAGAGACTGGGAACTGGGCTCAGCCCCGGCCTGCTTCTaGCCCCTCCTCCCTCATTCC | + |
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Preference number: 2 (lower is better) Translates to: SPMELKETSPPRDWELGSAPACF*PLLPHS Trigger: GGAATGAGGGAGGAGGGGGCAGAAGCAGGCCGGGGC...TGAGCCCAGTTCCCAGTCTCTTGGTGGGCTTGTTTCTTTTAACTCCATAGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| 3UTR-3UTR GCA 90 bp | CACCAAGAGACTGGGAACTGGGCTCAGTCAACACACAAAAGGTTTGGAAGCTGTAAGCCAGCCCCGGCCTaGTTCTGCCCCCTCCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: HQETGNWAQSTHKRFGSCKPAPA*FCPLLP Trigger: AGGGAGGAGGGGGCAGAAGCAGGCCGGGGCTGGCTT...ACAGCTTCCAAACCTTTTGTGTGTTGACTGAGCCCAGTTCCCAGTCTCTTGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| 3UTR-3UTR CCA 90 bp | GCCCACCAAGAGACTGGGAACTGGGCTCAGTCAACACACAAAAGGTTTGGAAGCAGTGCAGTTAGGCAGTaGGCTGGTCCCAGGGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: AHQETGNWAQSTHKRFGSSAVRQ*AGPRGW Trigger: CCAGCCCCTGGGACCAGCCCACTGCCTAACTGCACT...GCTTCCAAACCTTTTGTGTGTTGACTGAGCCCAGTTCCCAGTCTCTTGGTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGATGCCCTCACTCACTACGCCAGCCACCTCCACTCCCAACCCTCTCACAGGGGCTTCGCCAGGCAATaGGCACAGACCTCTTTAATA | + |
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Preference number: 2 (lower is better) Translates to: ADALTHYASHLHSQPSHRGFARQ*AQTSLI Trigger: TATTAAAGAGGTCTGTGCCCATTGCCTGGCGAAGCC...CCTGTGAGAGGGTTGGGAGTGGAGGTGGCTGGCGTAGTGAGTGAGGGCATCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR CAA 90 bp | CCCACCAAGAGACTGGGAACTGGGCTCAGTCAACACACAAAAGGTTaGGAAGCTGTAGCCCTGTCTCCTGGGAGAGGCAGCAAAGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: PTKRLGTGLSQHTKG*EAVALSPGRGSKAS Trigger: GCTGGCTTTGCTGCCTCTCCCAGGAGACAGGGCTACAGCTTCCAAACCTTTTGTGTGTTGACTGAGCCCAGTTCCCAGTCTCTTGGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| 3UTR-3UTR GCA 90 bp | GGTGCCTGGTTTCCTTGGATTTCCTTCCGTGAGTTCCCTTCTCCACACTGGCCCCTCATTCCCTTCCAATaGCCAGTCCAGAGCCAAGGG | + |
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Preference number: 2 (lower is better) Translates to: GAWFPWISFREFPSPHWPLIPFQ*PVQSQG Trigger: CCCTTGGCTCTGGACTGGGCATTGGAAGGGAATGAG...GGGCCAGTGTGGAGAAGGGAACTCACGGAAGGAAATCCAAGGAAACCAGGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR-3UTR GCA 90 bp | ACCAAGAGACTGGGAACTGGGCTCAGTCAACACACAAAAGGTTTGGAAGCTGTAAAGCCAGCCCCGGCCTaGTTCTGCCCCCTCCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: TKRLGTGLSQHTKGLEAVKPAPA*FCPLLP Trigger: AGGGAGGAGGGGGCAGAAGCAGGCCGGGGCTGGCTT...TACAGCTTCCAAACCTTTTGTGTGTTGACTGAGCCCAGTTCCCAGTCTCTTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| 3UTR-3UTR CCA 90 bp | CAGCCCTATGGAGTTAAAAGAAACAAGCCCACCAAGAGACTGGGAACTGGGCTCAGTGCAGTTAGGCAGTaGGCTGGTCCCAGGGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: QPYGVKRNKPTKRLGTGLSAVRQ*AGPRGW Trigger: CCAGCCCCTGGGACCAGCCCACTGCCTAACTGCACT...GAGCCCAGTTCCCAGTCTCTTGGTGGGCTTGTTTCTTTTAACTCCATAGGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| 3UTR-3UTR CCA 90 bp | GGTGCCTGGTTTCCTTGGATTTCCTTCCGTGAGTTCCCTTCTCCACACTGGCCCCAAGAGCTCAGACACTaGGGATGGGACAGGGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: GAWFPWISFREFPSPHWPQELRH*GWDREE Trigger: TTCCTCCCTGTCCCATCCCCAGTGTCTGAGCTCTTG...GGGCCAGTGTGGAGAAGGGAACTCACGGAAGGAAATCCAAGGAAACCAGGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR-3UTR GCA 90 bp | AGCACTTCCATAGCAAACCAGCCCTATGGAGTTAAAAGAAACAAGCCCACCAAGGCCCCGGCCTGCTTCTaGCCCCTCCTCCCTCATTCC | + |
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Preference number: 2 (lower is better) Translates to: STSIANQPYGVKRNKPTKAPACF*PLLPHS Trigger: GGAATGAGGGAGGAGGGGGCAGAAGCAGGCCGGGGC...CTTGGTGGGCTTGTTTCTTTTAACTCCATAGGGCTGGTTTGCTATGGAAGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| 3UTR CAA 90 bp | ATTCTGGAGTGTCATCTACCCATGCCACACGTGGGGGAAACAGGATaGTGGAAGATGAAAGCCCTGGACCAGAGATGGCCAGAAGTCGGC | + |
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Preference number: 2 (lower is better) Translates to: ILECHLPMPHVGETG*WKMKALDQRWPEVG Trigger: GCCGACTTCTGGCCATCTCTGGTCCAGGGCTTTCATCTTCCACAATCCTGTTTCCCCCACGTGTGGCATGGGTAGATGACACTCCAGAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR-3UTR GCA 90 bp | CACCAAGAGACTGGGAACTGGGCTCAGTCAACACACAAAAGGTTTGGAAGCTGTCTGGCAGTTCACGGTTaGTATGCCCAGGGCTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: HQETGNWAQSTHKRFGSCLAVHG*YAQGFR Trigger: CCTGAAGCCCTGGGCATAGCAACCGTGAACTGCCAG...ACAGCTTCCAAACCTTTTGTGTGTTGACTGAGCCCAGTTCCCAGTCTCTTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| 3UTR-3UTR GCA 90 bp | ATGGGGCCTTCTGTCCTGATGACCCTGCGTGTGAACAATTTAGGACTCTCTGGGGACTCCACCTACTTCTaGCTCTCATCCAGGATGGAG | + |
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Preference number: 2 (lower is better) Translates to: MGPSVLMTLRVNNLGLSGDSTYF*LSSRME Trigger: CTCCATCCTGGATGAGAGGCAGAAGTAGGTGGAGTC...CCCAGAGAGTCCTAAATTGTTCACACGCAGGGTCATCAGGACAGAAGGCCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR-3UTR CCA 90 bp | ACCCATGCCACACGTGGGGGAAACAGGATTGTGGAAGATGAAAGCCCTGGACCAACCCTACTCGGTGCCTaGTTTCCTTGGATTTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: THATRGGNRIVEDESPGPTLLGA*FPWISF Trigger: GAAGGAAATCCAAGGAAACCAGGCACCGAGTAGGGT...TGGTCCAGGGCTTTCATCTTCCACAATCCTGTTTCCCCCACGTGTGGCATGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR-3UTR GCA 90 bp | CACCAAGAGACTGGGAACTGGGCTCAGTCAACACACAAAAGGTTTGGAAGCTGTCTCATTCCCTTCCAATaGCCAGTCCAGAGCCAAGGG | + |
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Preference number: 2 (lower is better) Translates to: HQETGNWAQSTHKRFGSCLIPFQ*PVQSQG Trigger: CCCTTGGCTCTGGACTGGGCATTGGAAGGGAATGAG...ACAGCTTCCAAACCTTTTGTGTGTTGACTGAGCCCAGTTCCCAGTCTCTTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGGCAGAGGTGAGGGGATTGCAGGGAAGGTATACATCAGATGTGATGGGAACTCTCTGGGGTCTGTTTaGTTCCTGGGTTTGACCCCA | + |
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Preference number: 2 (lower is better) Translates to: RGRGEGIAGKVYIRCDGNSLGSV*FLGLTP Trigger: TGGGGTCAAACCCAGGAAGCAAACAGACCCCAGAGA...GTTCCCATCACATCTGATGTATACCTTCCCTGCAATCCCCTCACCTCTGCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR-3UTR GCA 90 bp | AGCACTTCCATAGCAAACCAGCCCTATGGAGTTAAAAGAAACAAGCCCACCAAGCTGGCAGTTCACGGTTaGTATGCCCAGGGCTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: STSIANQPYGVKRNKPTKLAVHG*YAQGFR Trigger: CCTGAAGCCCTGGGCATAGCAACCGTGAACTGCCAG...CTTGGTGGGCTTGTTTCTTTTAACTCCATAGGGCTGGTTTGCTATGGAAGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| 3UTR-3UTR CCA 90 bp | AGAGGCAGAGGTGAGGGGATTGCAGGGAAGGTATACATCAGATGTGATGGGAACTCAGAGCTTTCTGGATaGTGTCACATCCACCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: RGRGEGIAGKVYIRCDGNSELSG*CHIHLL Trigger: AAGGAGGTGGATGTGACACCATCCAGAAAGCTCTGA...GTTCCCATCACATCTGATGTATACCTTCCCTGCAATCCCCTCACCTCTGCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR-3UTR CCA 90 bp | TGGGTAAGCACTTCCATAGCAAACCAGCCCTATGGAGTTAAAAGAAACAAGCCCCAAGAGACTGGGAACTaGGCTCAGTCAACACACAAA | + |
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Preference number: 2 (lower is better) Translates to: WVSTSIANQPYGVKRNKPQETGN*AQSTHK Trigger: TTTGTGTGTTGACTGAGCCCAGTTCCCAGTCTCTTG...GGGCTTGTTTCTTTTAACTCCATAGGGCTGGTTTGCTATGGAAGTGCTTACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGATACACAAAGACTTGATAAAAAGTACATAAAAGGCTCAAGCGTCAACAAGCCAGAGAGGGAGGAGTaGATTGTGGCGGGAGGTGTC | + |
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Preference number: 2 (lower is better) Translates to: RDTQRLDKKYIKGSSVNKPEREE*IVAGGV Trigger: GACACCTCCCGCCACAATGCACTCCTCCCTCTCTGG...CTTGTTGACGCTTGAGCCTTTTATGTACTTTTTATCAAGTCTTTGTGTATCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR-3UTR CCA 90 bp | AGAGATACACAAAGACTTGATAAAAAGTACATAAAAGGCTCAAGCGTCAACAAGTGTGCCGGTAGCAGGTaGCAGGACATGGCTTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: RDTQRLDKKYIKGSSVNKCAGSR*QDMASL Trigger: CAGAGAAGCCATGTCCTGCCACCTGCTACCGGCACA...CTTGTTGACGCTTGAGCCTTTTATGTACTTTTTATCAAGTCTTTGTGTATCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR-3UTR CCA 90 bp | AGAGATACACAAAGACTTGATAAAAAGTACATAAAAGGCTCAAGCGTCAACAAGGGGTTAGAGCTGGCATaGTCAGTGGGTCATGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: RDTQRLDKKYIKGSSVNKGLELA*SVGHVS Trigger: GGAGACATGACCCACTGACCATGCCAGCTCTAACCC...CTTGTTGACGCTTGAGCCTTTTATGTACTTTTTATCAAGTCTTTGTGTATCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR TCA 72 bp | CTCGGCACAGGAGAGGCGCTGGCTGGTCCACGGAAGTaGGGGTGTGCCGGTAGCAGGTGGCAGGACATGGCT | + |
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Preference number: 3 (lower is better) Translates to: LGTGEALAGPRK*GCAGSRWQDMA Trigger: AGCCATGTCCTGCCACCTGCTACCGGCACACCCTCACTTCCGTGGACCAGCCAGCGCCTCTCCTGTGCCGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR CCA 72 bp | GCCCCCTGGTGGGAGCCTCCGTTCTGCAAGGTGAGCTaGCAGATGCCCTCACTCACTACGCCAGCCACCTCC | + |
|
Preference number: 3 (lower is better) Translates to: APWWEPPFCKVS*QMPSLTTPATS Trigger: GGAGGTGGCTGGCGTAGTGAGTGAGGGCATCTGCCAGCTCACCTTGCAGAACGGAGGCTCCCACCAGGGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
||
| 3UTR CCA 72 bp | GTGAGTTCCCTTCTCCACACTGGCCCAGCCCCCTGGTaGGAGCCTCCGTTCTGCAAGGTGAGCTGGCAGATG | + |
|
Preference number: 3 (lower is better) Translates to: VSSLLHTGPAPW*EPPFCKVSWQM Trigger: CATCTGCCAGCTCACCTTGCAGAACGGAGGCTCCCACCAGGGGGCTGGGCCAGTGTGGAGAAGGGAACTCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
||
| 3UTR TCA 72 bp | TGGGGGCGCTGGGAGCCTCCCTTCTGGTCAGCTGTGTaGCTCACTCCTCAGGGCTTTGGTCTAGTCTGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: WGRWEPPFWSAV*LTPQGFGLVCF Trigger: GAAGCAGACTAGACCAAAGCCCTGAGGAGTGAGTCACACAGCTGACCAGAAGGGAGGCTCCCAGCGCCCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
||
| 3UTR GCA 72 bp | CCCTCTACCCCACTAGCAGCACCAGAGAGGGAGGAGTaGATTGTGGCGGGAGGTGTCCCTGCTCAAATGAGT | + |
|
Preference number: 3 (lower is better) Translates to: PSTPLAAPEREE*IVAGGVPAQMS Trigger: ACTCATTTGAGCAGGGACACCTCCCGCCACAATGCACTCCTCCCTCTCTGGTGCTGCTAGTGGGGTAGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
||
| 3UTR CCA 72 bp | ACACACAAAAGGTTTGGAAGCTGTAGCCCTGTCTCCTaGGAGAGGCAGCAAAGCCAGCCCCGGCCTGCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: THKRFGSCSPVS*ERQQSQPRPAS Trigger: AGAAGCAGGCCGGGGCTGGCTTTGCTGCCTCTCCCAGGAGACAGGGCTACAGCTTCCAAACCTTTTGTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
||
| 3UTR CCA 72 bp | ATCTTTCCTCTCTCTGGGCTGCAGTGGCTATGGGTGTaGCTTAGGGAGCCCAGGGCTGGAGAAAGCCTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: IFPLSGLQWLWV*LREPRAGESLV Trigger: AACCAGGCTTTCTCCAGCCCTGGGCTCCCTAAGCCACACCCATAGCCACTGCAGCCCAGAGAGAGGAAAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
||
| 3UTR CCA 72 bp | ACGAGGCTGGACACCCTACTCGGTGCCTGGTTTCCTTaGATTTCCTTCCGTGAGTTCCCTTCTCCACACTGG | + |
|
Preference number: 3 (lower is better) Translates to: TRLDTLLGAWFP*ISFREFPSPHW Trigger: CCAGTGTGGAGAAGGGAACTCACGGAAGGAAATCCAAGGAAACCAGGCACCGAGTAGGGTGTCCAGCCTCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
||
| 3UTR CCA 72 bp | GGGTTAGAGCTGGCATGGTCAGTGGGTCATGTCTCCTaGCAGGCAAGACAGGTCACACGCATCCAATCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: GLELAWSVGHVS*QARQVTRIQSG Trigger: ACCTGATTGGATGCGTGTGACCTGTCTTGCCTGCCAGGAGACATGACCCACTGACCATGCCAGCTCTAACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCCTATGGAGTTAAAAGAAACAAGCCCACCAAGAGACTGGGAACTGGGCTCGCTGGCAGTTCACGGTaGCTATGCCCAGGGCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: QPYGVKRNKPTKRLGTGLAGSSR*LCPGLQ Trigger: CTGAAGCCCTGGGCATAGCAACCGTGAACTGCCAGC...GAGCCCAGTTCCCAGTCTCTTGGTGGGCTTGTTTCTTTTAACTCCATAGGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTCATGGCTTGTCTGGTGCGTTGTATGTGGGTAAGCACTTCCATAGCAAACCAGCTGGCAGTTCACGGTaGCTATGCCCAGGGCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: AHGLSGALYVGKHFHSKPAGSSR*LCPGLQ Trigger: CTGAAGCCCTGGGCATAGCAACCGTGAACTGCCAGC...TGGTTTGCTATGGAAGTGCTTACCCACATACAACGCACCAGACAAGCCATGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
||
| 3UTR CCA 72 bp | CATCTACCCATGCCACACGTGGGGGAAACAGGATTGTaGAAGATGAAAGCCCTGGACCAGAGATGGCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: HLPMPHVGETGL*KMKALDQRWPE Trigger: TTCTGGCCATCTCTGGTCCAGGGCTTTCATCTTCCACAATCCTGTTTCCCCCACGTGTGGCATGGGTAGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
||
| 3UTR TCA 72 bp | CTCTCCAGTCTCTGGGGTCTGTTTGCTTCCTGGGTTTaGCCCCAGGCTTCTGATAAGACTCCACCTACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LSSLWGLFASWV*PQASDKTPPTS Trigger: AGAAGTAGGTGGAGTCTTATCAGAAGCCTGGGGTCAAACCCAGGAAGCAAACAGACCCCAGAGACTGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
||
| 3UTR TCA 72 bp | TGCTCATCGGCTGGACTTATAAAGGTAATGGTCAGCTaGCTCGGGTGGAAATGGCTTCAGGTCCTGGGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: CSSAGLIKVMVS*LGWKWLQVLGL Trigger: AAGCCCCAGGACCTGAAGCCATTTCCACCCGAGTCAGCTGACCATTACCTTTATAAGTCCAGCCGATGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
||
| 3UTR TCA 72 bp | AGGAGTGCATTGTGGCGGGAGGTGTCCCTGCTCAAATaGGTGTGTGGATCATGTCCTCAGCTCAGCTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: RSALWREVSLLK*VCGSCPQLSFL Trigger: AAGAAAGCTGAGCTGAGGACATGATCCACACACTCATTTGAGCAGGGACACCTCCCGCCACAATGCACTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
||
| 3UTR GCA 72 bp | ATGTCCAGGCATCACTCTCGCTCCTCACACGACAACTaGCACCTGCTAATACTGTCACGCAAAGGGCTCATT | + |
|
Preference number: 3 (lower is better) Translates to: MSRHHSRSSHDN*HLLILSRKGLI Trigger: AATGAGCCCTTTGCGTGACAGTATTAGCAGGTGGCAGTTGTCGTGTGAGGAGCGAGAGTGATGCCTGGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
||
| 3UTR CCA 72 bp | ATTGTGGCGGGAGGTGTCCCTGCTCAAATGAGTGTGTaGATCATGTCCTCAGCTCAGCTTTCTTCCCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: IVAGGVPAQMSV*IMSSAQLSSPL Trigger: CAAAGGGGAAGAAAGCTGAGCTGAGGACATGATCCACACACTCATTTGAGCAGGGACACCTCCCGCCACAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
||
| 3UTR-3UTR CAA 90 bp | AGCACTTCCATAGCAAACCAGCCCTATGGAGTTAAAAGAAACAAGCCCACCAAGGCTGGCAGTTCACGGTaGCTATGCCCAGGGCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: STSIANQPYGVKRNKPTKAGSSR*LCPGLQ Trigger: CTGAAGCCCTGGGCATAGCAACCGTGAACTGCCAGC...CTTGGTGGGCTTGTTTCTTTTAACTCCATAGGGCTGGTTTGCTATGGAAGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
||
| 3UTR CCA 72 bp | TTTAGGACTCTCTGGGTTGGAAAGGAATCACGAGGCTaGACACCCTACTCGGTGCCTGGTTTCCTTGGATTT | + |
|
Preference number: 3 (lower is better) Translates to: FRTLWVGKESRG*TPYSVPGFLGF Trigger: AAATCCAAGGAAACCAGGCACCGAGTAGGGTGTCCAGCCTCGTGATTCCTTTCCAACCCAGAGAGTCCTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
||
| 3UTR-3UTR CAA 90 bp | ACCCATGCCACACGTGGGGGAAACAGGATTGTGGAAGATGAAAGCCCTGGACCAAAGACAACAGCCCTATaGCAGACATTTATCAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: THATRGGNRIVEDESPGPKTTAL*QTFIRG Trigger: ACCTCTGATAAATGTCTGCAATAGGGCTGTTGTCTT...TGGTCCAGGGCTTTCATCTTCCACAATCCTGTTTCCCCCACGTGTGGCATGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
||
| 3UTR CCA 72 bp | ACGCAAAGGGCTCATTGTTTCAAGTATCTGGCATTGTaGGTAAACCTGACCCAATGTGGACTCTCCAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: TQRAHCFKYLAL*VNLTQCGLSNQ Trigger: CTGGTTGGAGAGTCCACATTGGGTCAGGTTTACCCACAATGCCAGATACTTGAAACAATGAGCCCTTTGCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
||
| 3UTR GCA 72 bp | GCTAGGAACACTCGGTTAAGAAGACAACAGCCCTATTaGAGACATTTATCAGAGGTCTGCCAAAGACTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: ARNTRLRRQQPY*RHLSEVCQRLG Trigger: CCCAAGTCTTTGGCAGACCTCTGATAAATGTCTGCAATAGGGCTGTTGTCTTCTTAACCGAGTGTTCCTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
||
| 3UTR GCA 72 bp | AATTTACCCACAGCATGGAAAGCAAATGAGTCCTTTTaGAAAGCCAGTCACTGGCCTCACCACACACTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: NLPTAWKANESF*KASHWPHHTLK Trigger: CTTGAGTGTGTGGTGAGGCCAGTGACTGGCTTTGCAAAAGGACTCATTTGCTTTCCATGCTGTGGGTAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
||
| 3UTR CCA 72 bp | CCTATGGAGTTAAAAGAAACAAGCCCACCAAGAGACTaGGAACTGGGCTCAGTCAACACACAAAAGGTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: PMELKETSPPRD*ELGSVNTQKVW Trigger: CCAAACCTTTTGTGTGTTGACTGAGCCCAGTTCCCAGTCTCTTGGTGGGCTTGTTTCTTTTAACTCCATAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
||
| 3UTR CCA 72 bp | ATAGTATTGAGCACTTTCAGTTCAGAGCTTTCTGGATaGTGTCACATCCACCTCCTTGAACATGTCCCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: IVLSTFSSELSG*CHIHLLEHVPK Trigger: CTTAGGGACATGTTCAAGGAGGTGGATGTGACACCATCCAGAAAGCTCTGAACTGAAAGTGCTCAATACTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
||
| 3UTR TCA 72 bp | AAGGTATACATCAGATGTGATGGGAACACACATTTCTaGAAAAACTACAGGGAACCTCGGAATGAGAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: KVYIRCDGNTHF*KNYREPRNESS Trigger: TGAGCTCTCATTCCGAGGTTCCCTGTAGTTTTTTCAGAAATGTGTGTTCCCATCACATCTGATGTATACCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
||
| 3UTR TCA 72 bp | TTTCATGTTGAAAATATTCATAAGTATTACCGGATCTaGGAAATGGTGAATACCTCATCTGACATGCCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: FHVENIHKYYRI*EMVNTSSDMPS Trigger: AGAGGGCATGTCAGATGAGGTATTCACCATTTCTCAGATCCGGTAATACTTATGAATATTTTCAACATGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
||
| CDS-3UTR CCA 90 bp | GCAGATGCCCTCACTCACTACGCCAGCCACCTCCACTCCCAACCCTCTCACAGGGTTTGTGAGTGCCGGTaGCCCTGTCTCCTCGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: ADALTHYASHLHSQPSHRVCECR*PCLLAI Trigger: AATGGCGAGGAGACAGGGCCACCGGCACTCACAAAC...CCTGTGAGAGGGTTGGGAGTGGAGGTGGCTGGCGTAGTGAGTGAGGGCATCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
||
| CDS-3UTR CCA 90 bp | CTCAGTGCAGTTAGGCAGTGGGCTGGTCCCAGGGGCTGGCAGTTCACGGTTGCTGTTTGTGAGTGCCGGTaGCCCTGTCTCCTCGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LSAVRQWAGPRGWQFTVAVCECR*PCLLAI Trigger: AATGGCGAGGAGACAGGGCCACCGGCACTCACAAAC...AGCAACCGTGAACTGCCAGCCCCTGGGACCAGCCCACTGCCTAACTGCACTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
||
| CDS-3UTR GCA 90 bp | CTCAGTGCAGTTAGGCAGTGGGCTGGTCCCAGGGGCTGGCAGTTCACGGTTGCTGGAAGCCATCCCCTGTaGGCATGTATTGTTCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSAVRQWAGPRGWQFTVAGSHPL*ACIVPA Trigger: TGCGGGAACAATACATGCGCACAGGGGATGGCTTCC...AGCAACCGTGAACTGCCAGCCCCTGGGACCAGCCCACTGCCTAACTGCACTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
||
| CDS-3UTR GCA 90 bp | GGTGCCTGGTTTCCTTGGATTTCCTTCCGTGAGTTCCCTTCTCCACACTGGCCCGGAAGCCATCCCCTGTaGGCATGTATTGTTCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GAWFPWISFREFPSPHWPGSHPL*ACIVPA Trigger: TGCGGGAACAATACATGCGCACAGGGGATGGCTTCC...GGGCCAGTGTGGAGAAGGGAACTCACGGAAGGAAATCCAAGGAAACCAGGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
||
| CDS-3UTR CCA 90 bp | TGTGGCGGGAGGTGTCCCTGCTCAAATGAGTGTGTGGATCATGTCCTCAGCTCAACACGCAGAATGAGCTaGTGGAAGCGGTCCACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CGGRCPCSNECVDHVLSSTRRMS*WKRSTC Trigger: GCACGTGGACCGCTTCCACCAGCTCATTCTGCGTGT...TGAGCTGAGGACATGATCCACACACTCATTTGAGCAGGGACACCTCCCGCCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
||
| 3UTR CAA 72 bp | AAGCCCTGGACCAGAGATGGCCAGAAGTCGGCCATTTaGTCCACCTGCGTGTGGGGTCAGTTTAGGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: KPWTRDGQKSAI*STCVWGQFRTW Trigger: CCATGTCCTAAACTGACCCCACACGCAGGTGGACAAAATGGCCGACTTCTGGCCATCTCTGGTCCAGGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
||
| 3UTR CAA 72 bp | GCCACCTCCACTCCCAACCCTCTCACAGGGTGTACTTaGTTCTTGCTGTTCCTCCATACGGGTCTTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ATSTPNPLTGCT*FLLFLHTGLSW Trigger: CCAGCTAAGACCCGTATGGAGGAACAGCAAGAACAAAGTACACCCTGTGAGAGGGTTGGGAGTGGAGGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
||
| CDS-3UTR TCA 90 bp | CCAGCCACCTCCACTCCCAACCCTCTCACAGGGTGTACTTTGTTCTTGCTGTTCGAGGATCATTGGGAATaGCTCCCTGTCCTTGACACG | + |
|
Preference number: 4 (lower is better) Translates to: PATSTPNPLTGCTLFLLFEDHWE*LPVLDT Trigger: CGTGTCAAGGACAGGGAGTCATTCCCAATGATCCTC...GAACAGCAAGAACAAAGTACACCCTGTGAGAGGGTTGGGAGTGGAGGTGGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
||
| CDS-3UTR GCA 90 bp | CAACACACAAAAGGTTTGGAAGCTGTAGCCCTGTCTCCTGGGAGAGGCAGCAAAACTGCAGTTTGTGAGTaGCGGTGGCCCTGTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QHTKGLEAVALSPGRGSKTAVCE*RWPCLL Trigger: GAGGAGACAGGGCCACCGGCACTCACAAACTGCAGT...TTTGCTGCCTCTCCCAGGAGACAGGGCTACAGCTTCCAAACCTTTTGTGTGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
||
| CDS-3UTR CCA 90 bp | CAGCCCTATGGAGTTAAAAGAAACAAGCCCACCAAGAGACTGGGAACTGGGCTCGTTTGTGAGTGCCGGTaGCCCTGTCTCCTCGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: QPYGVKRNKPTKRLGTGLVCECR*PCLLAI Trigger: AATGGCGAGGAGACAGGGCCACCGGCACTCACAAAC...GAGCCCAGTTCCCAGTCTCTTGGTGGGCTTGTTTCTTTTAACTCCATAGGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
||
| 3UTR CAA 72 bp | TGTCATCTACCCATGCCACACGTGGGGGAAACAGGATaGTGGAAGATGAAAGCCCTGGACCAGAGATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CHLPMPHVGETG*WKMKALDQRWP Trigger: TGGCCATCTCTGGTCCAGGGCTTTCATCTTCCACAATCCTGTTTCCCCCACGTGTGGCATGGGTAGATGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
||
| CDS-3UTR GCA 90 bp | CCCACCAAGAGACTGGGAACTGGGCTCAGTCAACACACAAAAGGTTTGGAAGCTGGAAGCCATCCCCTGTaGGCATGTATTGTTCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: PTKRLGTGLSQHTKGLEAGSHPL*ACIVPA Trigger: TGCGGGAACAATACATGCGCACAGGGGATGGCTTCC...AGCTTCCAAACCTTTTGTGTGTTGACTGAGCCCAGTTCCCAGTCTCTTGGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
||
| CDS-3UTR GCA 90 bp | GCTCATGGCTTGTCTGGTGCGTTGTATGTGGGTAAGCACTTCCATAGCAAACCAACTGCAGTTTGTGAGTaGCGGTGGCCCTGTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AHGLSGALYVGKHFHSKPTAVCE*RWPCLL Trigger: GAGGAGACAGGGCCACCGGCACTCACAAACTGCAGT...TGGTTTGCTATGGAAGTGCTTACCCACATACAACGCACCAGACAAGCCATGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
||
| CDS-3UTR GCA 90 bp | CACCAAGAGACTGGGAACTGGGCTCAGTCAACACACAAAAGGTTTGGAAGCTGTACTGCAGTTTGTGAGTaGCGGTGGCCCTGTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HQETGNWAQSTHKRFGSCTAVCE*RWPCLL Trigger: GAGGAGACAGGGCCACCGGCACTCACAAACTGCAGT...ACAGCTTCCAAACCTTTTGTGTGTTGACTGAGCCCAGTTCCCAGTCTCTTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
||
| 3UTR CAA 72 bp | ACAGGGAGGAAGCTTGCTCATGGCTTGTCTGGTGCGTaGTATGTGGGTAAGCACTTCCATAGCAAACCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TGRKLAHGLSGA*YVGKHFHSKPA Trigger: GGCTGGTTTGCTATGGAAGTGCTTACCCACATACAACGCACCAGACAAGCCATGAGCAAGCTTCCTCCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
||
| 3UTR CAA 72 bp | ATGACCCTGCGTGTGAACAATTTAGGACTCTCTGGGTaGGAAAGGAATCACGAGGCTGGACACCCTACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: MTLRVNNLGLSG*ERNHEAGHPTR Trigger: CCGAGTAGGGTGTCCAGCCTCGTGATTCCTTTCCAACCCAGAGAGTCCTAAATTGTTCACACGCAGGGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
||
| CDS-3UTR TCA 90 bp | CCAGCCACCTCCACTCCCAACCCTCTCACAGGGTGTACTTTGTTCTTGCTGTTCTCCAAGATGGCCCACTaGTTGTCAATCTCTGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: PATSTPNPLTGCTLFLLFSKMAH*LSISVC Trigger: GCATACAGAGATTGACAATCAGTGGGCCATCTTGGA...GAACAGCAAGAACAAAGTACACCCTGTGAGAGGGTTGGGAGTGGAGGTGGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
||
| CDS-3UTR TCA 90 bp | CTCAGTCAACACACAAAAGGTTTGGAAGCTGTAGCCCTGTCTCCTGGGAGAGGCTTCCTTGGTCCCTGGTaGCTTTCCTTAGGTGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LSQHTKGLEAVALSPGRGFLGPW*LSLGAS Trigger: TGATGCACCTAAGGAAAGTCACCAGGGACCAAGGAA...GCCTCTCCCAGGAGACAGGGCTACAGCTTCCAAACCTTTTGTGTGTTGACTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
||
| CDS-3UTR TCA 90 bp | GCCCACCAAGAGACTGGGAACTGGGCTCAGTCAACACACAAAAGGTTTGGAAGCTTCCTTGGTCCCTGGTaGCTTTCCTTAGGTGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: AHQETGNWAQSTHKRFGSFLGPW*LSLGAS Trigger: TGATGCACCTAAGGAAAGTCACCAGGGACCAAGGAA...GCTTCCAAACCTTTTGTGTGTTGACTGAGCCCAGTTCCCAGTCTCTTGGTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
||
| CDS-3UTR TCA 90 bp | GCTCATGGCTTGTCTGGTGCGTTGTATGTGGGTAAGCACTTCCATAGCAAACCAGAGGATCATTGGGAATaGCTCCCTGTCCTTGACACG | + |
|
Preference number: 4 (lower is better) Translates to: AHGLSGALYVGKHFHSKPEDHWE*LPVLDT Trigger: CGTGTCAAGGACAGGGAGTCATTCCCAATGATCCTC...TGGTTTGCTATGGAAGTGCTTACCCACATACAACGCACCAGACAAGCCATGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
||
| CDS-3UTR TCA 90 bp | CACCAAGAGACTGGGAACTGGGCTCAGTCAACACACAAAAGGTTTGGAAGCTGTGAGGATCATTGGGAATaGCTCCCTGTCCTTGACACG | + |
|
Preference number: 4 (lower is better) Translates to: HQETGNWAQSTHKRFGSCEDHWE*LPVLDT Trigger: CGTGTCAAGGACAGGGAGTCATTCCCAATGATCCTC...ACAGCTTCCAAACCTTTTGTGTGTTGACTGAGCCCAGTTCCCAGTCTCTTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
||
| CDS-3UTR CCA 90 bp | CTCAGTCAACACACAAAAGGTTTGGAAGCTGTAGCCCTGTCTCCTGGGAGAGGCGCGGGTCCTTGGCACTaGTCTCTATATATGGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: LSQHTKGLEAVALSPGRGAGPWH*SLYMGY Trigger: ATATCCCATATATAGAGACCAGTGCCAAGGACCCGC...GCCTCTCCCAGGAGACAGGGCTACAGCTTCCAAACCTTTTGTGTGTTGACTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| CDS-3UTR GCA 90 bp | GGTGCCTGGTTTCCTTGGATTTCCTTCCGTGAGTTCCCTTCTCCACACTGGCCCTTCTCTGGAACCTGTTaGCTAATTACTCTAACTAGG | + |
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Preference number: 4 (lower is better) Translates to: GAWFPWISFREFPSPHWPFSGTC*LITLTR Trigger: CCTAGTTAGAGTAATTAGGCAACAGGTTCCAGAGAA...GGGCCAGTGTGGAGAAGGGAACTCACGGAAGGAAATCCAAGGAAACCAGGCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| CDS-3UTR CCA 90 bp | CTCAGTCAACACACAAAAGGTTTGGAAGCTGTAGCCCTGTCTCCTGGGAGAGGCCCAGAACATCCAAGATaGCCCACTGATTGTCAATCT | + |
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Preference number: 4 (lower is better) Translates to: LSQHTKGLEAVALSPGRGPEHPR*PTDCQS Trigger: AGATTGACAATCAGTGGGCCATCTTGGATGTTCTGG...GCCTCTCCCAGGAGACAGGGCTACAGCTTCCAAACCTTTTGTGTGTTGACTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| 3UTR CAA 72 bp | TCCACTCCCAACCCTCTCACAGGGTGTACTTTGTTCTaGCTGTTCCTCCATACGGGTCTTAGCTGGAAAAAG | + |
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Preference number: 4 (lower is better) Translates to: STPNPLTGCTLF*LFLHTGLSWKK Trigger: CTTTTTCCAGCTAAGACCCGTATGGAGGAACAGCAAGAACAAAGTACACCCTGTGAGAGGGTTGGGAGTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| CDS-3UTR CCA 90 bp | GCTCATGGCTTGTCTGGTGCGTTGTATGTGGGTAAGCACTTCCATAGCAAACCAGCGGGTCCTTGGCACTaGTCTCTATATATGGGATAT | + |
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Preference number: 4 (lower is better) Translates to: AHGLSGALYVGKHFHSKPAGPWH*SLYMGY Trigger: ATATCCCATATATAGAGACCAGTGCCAAGGACCCGC...TGGTTTGCTATGGAAGTGCTTACCCACATACAACGCACCAGACAAGCCATGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| CDS-3UTR TCA 90 bp | AGCACTTCCATAGCAAACCAGCCCTATGGAGTTAAAAGAAACAAGCCCACCAAGTTCCTTGGTCCCTGGTaGCTTTCCTTAGGTGCATCA | + |
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Preference number: 4 (lower is better) Translates to: STSIANQPYGVKRNKPTKFLGPW*LSLGAS Trigger: TGATGCACCTAAGGAAAGTCACCAGGGACCAAGGAA...CTTGGTGGGCTTGTTTCTTTTAACTCCATAGGGCTGGTTTGCTATGGAAGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| CDS-3UTR GCA 90 bp | CTCAGTCAACACACAAAAGGTTTGGAAGCTGTAGCCCTGTCTCCTGGGAGAGGCTTCTCTGGAACCTGTTaGCTAATTACTCTAACTAGG | + |
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Preference number: 4 (lower is better) Translates to: LSQHTKGLEAVALSPGRGFSGTC*LITLTR Trigger: CCTAGTTAGAGTAATTAGGCAACAGGTTCCAGAGAA...GCCTCTCCCAGGAGACAGGGCTACAGCTTCCAAACCTTTTGTGTGTTGACTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| CDS-3UTR TCA 90 bp | CACCAAGAGACTGGGAACTGGGCTCAGTCAACACACAAAAGGTTTGGAAGCTGTATCTTCTGGAAAAACTaGATAGTGAGCGCACTCTTG | + |
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Preference number: 4 (lower is better) Translates to: HQETGNWAQSTHKRFGSCIFWKN*IVSALL Trigger: CAAGAGTGCGCTCACTATTCAGTTTTTCCAGAAGAT...ACAGCTTCCAAACCTTTTGTGTGTTGACTGAGCCCAGTTCCCAGTCTCTTGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| CDS-3UTR TCA 90 bp | TGGGTAAGCACTTCCATAGCAAACCAGCCCTATGGAGTTAAAAGAAACAAGCCCTCCAAGATGGCCCACTaGTTGTCAATCTCTGTATGC | + |
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Preference number: 4 (lower is better) Translates to: WVSTSIANQPYGVKRNKPSKMAH*LSISVC Trigger: GCATACAGAGATTGACAATCAGTGGGCCATCTTGGA...GGGCTTGTTTCTTTTAACTCCATAGGGCTGGTTTGCTATGGAAGTGCTTACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| CDS-3UTR GCA 90 bp | CAACACACAAAAGGTTTGGAAGCTGTAGCCCTGTCTCCTGGGAGAGGCAGCAAATTCTCTGGAACCTGTTaGCTAATTACTCTAACTAGG | + |
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Preference number: 4 (lower is better) Translates to: QHTKGLEAVALSPGRGSKFSGTC*LITLTR Trigger: CCTAGTTAGAGTAATTAGGCAACAGGTTCCAGAGAA...TTTGCTGCCTCTCCCAGGAGACAGGGCTACAGCTTCCAAACCTTTTGTGTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| CDS-3UTR TCA 90 bp | ACCAAGAGACTGGGAACTGGGCTCAGTCAACACACAAAAGGTTTGGAAGCTGTAATCTTCTGGAAAAACTaGATAGTGAGCGCACTCTTG | + |
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Preference number: 4 (lower is better) Translates to: TKRLGTGLSQHTKGLEAVIFWKN*IVSALL Trigger: CAAGAGTGCGCTCACTATTCAGTTTTTCCAGAAGAT...TACAGCTTCCAAACCTTTTGTGTGTTGACTGAGCCCAGTTCCCAGTCTCTTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| CDS-3UTR GCA 90 bp | CTCAGTCAACACACAAAAGGTTTGGAAGCTGTAGCCCTGTCTCCTGGGAGAGGCGATATTGTATTTGGTTaGCATTTCTTTTCCTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: LSQHTKGLEAVALSPGRGDIVFG*HFFSLV Trigger: GACCAAGGAAAAGAAATGGCAACCAAATACAATATC...GCCTCTCCCAGGAGACAGGGCTACAGCTTCCAAACCTTTTGTGTGTTGACTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| CDS-3UTR CCA 90 bp | ATGGGGCCTTCTGTCCTGATGACCCTGCGTGTGAACAATTTAGGACTCTCTGGGCTACTAGTTTATATGTaGGAAGGTTTTCACTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: MGPSVLMTLRVNNLGLSGLLVYM*EGFHLE Trigger: TTCCAAGTGAAAACCTTCCCACATATAAACTAGTAG...CCCAGAGAGTCCTAAATTGTTCACACGCAGGGTCATCAGGACAGAAGGCCCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| 3UTR CAA 72 bp | ATGGCTTCAGGTCCTGGGGCTTCTGAGATAATAGTATaGAGCACTTTCAGTTCAGAGCTTTCTGGATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: MASGPGASEIIV*STFSSELSGWC Trigger: ACACCATCCAGAAAGCTCTGAACTGAAAGTGCTCAATACTATTATCTCAGAAGCCCCAGGACCTGAAGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| CDS-3UTR TCA 90 bp | AGCACTTCCATAGCAAACCAGCCCTATGGAGTTAAAAGAAACAAGCCCACCAAGATCTTCTGGAAAAACTaGATAGTGAGCGCACTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: STSIANQPYGVKRNKPTKIFWKN*IVSALL Trigger: CAAGAGTGCGCTCACTATTCAGTTTTTCCAGAAGAT...CTTGGTGGGCTTGTTTCTTTTAACTCCATAGGGCTGGTTTGCTATGGAAGTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| CDS-3UTR GCA 90 bp | CCCTATGGAGTTAAAAGAAACAAGCCCACCAAGAGACTGGGAACTGGGCTCAGTGATATTGTATTTGGTTaGCATTTCTTTTCCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PYGVKRNKPTKRLGTGLSDIVFG*HFFSLV Trigger: GACCAAGGAAAAGAAATGGCAACCAAATACAATATC...ACTGAGCCCAGTTCCCAGTCTCTTGGTGGGCTTGTTTCTTTTAACTCCATAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| CDS-3UTR CCA 90 bp | CCCTATGGAGTTAAAAGAAACAAGCCCACCAAGAGACTGGGAACTGGGCTCAGTCTACTAGTTTATATGTaGGAAGGTTTTCACTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PYGVKRNKPTKRLGTGLSLLVYM*EGFHLE Trigger: TTCCAAGTGAAAACCTTCCCACATATAAACTAGTAG...ACTGAGCCCAGTTCCCAGTCTCTTGGTGGGCTTGTTTCTTTTAACTCCATAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| CDS-3UTR CCA 90 bp | ACCAAGAGACTGGGAACTGGGCTCAGTCAACACACAAAAGGTTTGGAAGCTGTACTACTAGTTTATATGTaGGAAGGTTTTCACTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: TKRLGTGLSQHTKGLEAVLLVYM*EGFHLE Trigger: TTCCAAGTGAAAACCTTCCCACATATAAACTAGTAG...TACAGCTTCCAAACCTTTTGTGTGTTGACTGAGCCCAGTTCCCAGTCTCTTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| CDS-3UTR CCA 90 bp | AGAGATACACAAAGACTTGATAAAAAGTACATAAAAGGCTCAAGCGTCAACAAGGCGGGTCCTTGGCACTaGTCTCTATATATGGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: RDTQRLDKKYIKGSSVNKAGPWH*SLYMGY Trigger: ATATCCCATATATAGAGACCAGTGCCAAGGACCCGC...CTTGTTGACGCTTGAGCCTTTTATGTACTTTTTATCAAGTCTTTGTGTATCTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| CDS-3UTR CAA 90 bp | CTCAGTGCAGTTAGGCAGTGGGCTGGTCCCAGGGGCTGGCAGTTCACGGTTGCTAAGGTTTTATCCACGTaGAGAGGCGGGTCCTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSAVRQWAGPRGWQFTVAKVLST*RGGSLA Trigger: TGCCAAGGACCCGCCTCTCAACGTGGATAAAACCTT...AGCAACCGTGAACTGCCAGCCCCTGGGACCAGCCCACTGCCTAACTGCACTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| CDS-3UTR CAA 90 bp | GGTAATGGTCAGCTGACTCGGGTGGAAATGGCTTCAGGTCCTGGGGCTTCTGAGTGCATCAGATCCACCTaGTTGGCCACGAGGATCATT | + |
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Preference number: 5 (lower is better) Translates to: GNGQLTRVEMASGPGASECIRST*LATRII Trigger: AATGATCCTCGTGGCCAACAAGGTGGATCTGATGCA...CTCAGAAGCCCCAGGACCTGAAGCCATTTCCACCCGAGTCAGCTGACCATTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| CDS-3UTR CAA 90 bp | CCACCAAGAGACTGGGAACTGGGCTCAGTCAACACACAAAAGGTTTGGAAGCTGATCAGATCCACCTTGTaGGCCACGAGGATCATTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PPRDWELGSVNTQKVWKLIRSTL*ATRIIG Trigger: CCCAATGATCCTCGTGGCCAACAAGGTGGATCTGAT...CAGCTTCCAAACCTTTTGTGTGTTGACTGAGCCCAGTTCCCAGTCTCTTGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| CDS-3UTR CAA 90 bp | CAGCCCTATGGAGTTAAAAGAAACAAGCCCACCAAGAGACTGGGAACTGGGCTCATCAGATCCACCTTGTaGGCCACGAGGATCATTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QPYGVKRNKPTKRLGTGLIRSTL*ATRIIG Trigger: CCCAATGATCCTCGTGGCCAACAAGGTGGATCTGAT...GAGCCCAGTTCCCAGTCTCTTGGTGGGCTTGTTTCTTTTAACTCCATAGGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| CDS-3UTR CAA 90 bp | AGAGGCAGAGGTGAGGGGATTGCAGGGAAGGTATACATCAGATGTGATGGGAACAAGGTTTTATCCACGTaGAGAGGCGGGTCCTTGGCA | + |
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Preference number: 5 (lower is better) Translates to: RGRGEGIAGKVYIRCDGNKVLST*RGGSLA Trigger: TGCCAAGGACCCGCCTCTCAACGTGGATAAAACCTT...GTTCCCATCACATCTGATGTATACCTTCCCTGCAATCCCCTCACCTCTGCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035045.15 |
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| CDS-3UTR CAA 90 bp | AGCCCTATGGAGTTAAAAGAAACAAGCCCACCAAGAGACTGGGAACTGGGCTCAATCAGATCCACCTTGTaGGCCACGAGGATCATTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SPMELKETSPPRDWELGSIRSTL*ATRIIG Trigger: CCCAATGATCCTCGTGGCCAACAAGGTGGATCTGAT...TGAGCCCAGTTCCCAGTCTCTTGGTGGGCTTGTTTCTTTTAACTCCATAGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| CDS-3UTR CAA 90 bp | CACCAAGAGACTGGGAACTGGGCTCAGTCAACACACAAAAGGTTTGGAAGCTGTAAGGTTTTATCCACGTaGAGAGGCGGGTCCTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: HQETGNWAQSTHKRFGSCKVLST*RGGSLA Trigger: TGCCAAGGACCCGCCTCTCAACGTGGATAAAACCTT...ACAGCTTCCAAACCTTTTGTGTGTTGACTGAGCCCAGTTCCCAGTCTCTTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| CDS-3UTR CAA 90 bp | AGCCCTATGGAGTTAAAAGAAACAAGCCCACCAAGAGACTGGGAACTGGGCTCATGCCATTTCTTTTCCTaGGTCCCTGGTGACTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPMELKETSPPRDWELGSCHFFS*VPGDFP Trigger: AGGAAAGTCACCAGGGACCAAGGAAAAGAAATGGCA...TGAGCCCAGTTCCCAGTCTCTTGGTGGGCTTGTTTCTTTTAACTCCATAGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| CDS-3UTR CAA 90 bp | AGCACTTCCATAGCAAACCAGCCCTATGGAGTTAAAAGAAACAAGCCCACCAAGTGCATCAGATCCACCTaGTTGGCCACGAGGATCATT | + |
|
Preference number: 5 (lower is better) Translates to: STSIANQPYGVKRNKPTKCIRST*LATRII Trigger: AATGATCCTCGTGGCCAACAAGGTGGATCTGATGCA...CTTGGTGGGCTTGTTTCTTTTAACTCCATAGGGCTGGTTTGCTATGGAAGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| CDS-3UTR CAA 90 bp | AGCACTTCCATAGCAAACCAGCCCTATGGAGTTAAAAGAAACAAGCCCACCAAGTGCCATTTCTTTTCCTaGGTCCCTGGTGACTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: STSIANQPYGVKRNKPTKCHFFS*VPGDFP Trigger: AGGAAAGTCACCAGGGACCAAGGAAAAGAAATGGCA...CTTGGTGGGCTTGTTTCTTTTAACTCCATAGGGCTGGTTTGCTATGGAAGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| CDS-3UTR CAA 90 bp | CAGCCCTATGGAGTTAAAAGAAACAAGCCCACCAAGAGACTGGGAACTGGGCTCTGTCTCCTCGCCATTTaGTCTTCTTTTTCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QPYGVKRNKPTKRLGTGLCLLAI*SSFSSS Trigger: AGAAGAAGAAAAAGAAGACAAAATGGCGAGGAGACA...GAGCCCAGTTCCCAGTCTCTTGGTGGGCTTGTTTCTTTTAACTCCATAGGGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| CDS-3UTR CAA 90 bp | TCAACACACAAAAGGTTTGGAAGCTGTAGCCCTGTCTCCTGGGAGAGGCAGCAATGTCTCCTCGCCATTTaGTCTTCTTTTTCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: STHKRFGSCSPVSWERQQCLLAI*SSFSSS Trigger: AGAAGAAGAAAAAGAAGACAAAATGGCGAGGAGACA...TTGCTGCCTCTCCCAGGAGACAGGGCTACAGCTTCCAAACCTTTTGTGTGTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| CDS-3UTR CAA 90 bp | AGCCCTATGGAGTTAAAAGAAACAAGCCCACCAAGAGACTGGGAACTGGGCTCATGTCTCCTCGCCATTTaGTCTTCTTTTTCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SPMELKETSPPRDWELGSCLLAI*SSFSSS Trigger: AGAAGAAGAAAAAGAAGACAAAATGGCGAGGAGACA...TGAGCCCAGTTCCCAGTCTCTTGGTGGGCTTGTTTCTTTTAACTCCATAGGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| CDS CAA 90 bp | CCTTGGTCCCTGGTGACTTTCCTTAGGTGCATCAGATCCACCTTGTaGGCCACGAGGATCATTGGGAATGACTCCCTGTCCTTGACACGC | + |
|
Preference number: 6 (lower is better) Translates to: PWSLVTFLRCIRSTL*ATRIIGNDSLSLTR Trigger: GCGTGTCAAGGACAGGGAGTCATTCCCAATGATCCTCGTGGCCAACAAGGTGGATCTGATGCACCTAAGGAAAGTCACCAGGGACCAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| CDS CAA 72 bp | CTGGTGACTTTCCTTAGGTGCATCAGATCCACCTTGTaGGCCACGAGGATCATTGGGAATGACTCCCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LVTFLRCIRSTL*ATRIIGNDSLS Trigger: GGACAGGGAGTCATTCCCAATGATCCTCGTGGCCAACAAGGTGGATCTGATGCACCTAAGGAAAGTCACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| CDS CAA 72 bp | TCCCTGGTGACTTTCCTTAGGTGCATCAGATCCACCTaGTTGGCCACGAGGATCATTGGGAATGACTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLVTFLRCIRST*LATRIIGNDSL Trigger: CAGGGAGTCATTCCCAATGATCCTCGTGGCCAACAAGGTGGATCTGATGCACCTAAGGAAAGTCACCAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| CDS CAA 90 bp | TTTCCTTGGTCCCTGGTGACTTTCCTTAGGTGCATCAGATCCACCTaGTTGGCCACGAGGATCATTGGGAATGACTCCCTGTCCTTGACA | + |
|
Preference number: 6 (lower is better) Translates to: FPWSLVTFLRCIRST*LATRIIGNDSLSLT Trigger: TGTCAAGGACAGGGAGTCATTCCCAATGATCCTCGTGGCCAACAAGGTGGATCTGATGCACCTAAGGAAAGTCACCAGGGACCAAGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| CDS CCA 72 bp | TCTGGAACCTGTTGCCTAATTACTCTAACTAGGTCATaGAAGGTTTTATCCACGTTGAGAGGCGGGTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SGTCCLITLTRS*KVLSTLRGGSL Trigger: CAAGGACCCGCCTCTCAACGTGGATAAAACCTTCCATGACCTAGTTAGAGTAATTAGGCAACAGGTTCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| CDS CAA 72 bp | TCATGGAAGGTTTTATCCACGTTGAGAGGCGGGTCCTaGGCACTGGTCTCTATATATGGGATATTGTATTTG | + |
|
Preference number: 6 (lower is better) Translates to: SWKVLSTLRGGS*ALVSIYGILYL Trigger: CAAATACAATATCCCATATATAGAGACCAGTGCCAAGGACCCGCCTCTCAACGTGGATAAAACCTTCCATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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| CDS GCA 72 bp | GGCACTGGTCTCTATATATGGGATATTGTATTTGGTTaGCATTTCTTTTCCTTGGTCCCTGGTGACTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GTGLYIWDIVFG*HFFSLVPGDFP Trigger: AGGAAAGTCACCAGGGACCAAGGAAAAGAAATGGCAACCAAATACAATATCCCATATATAGAGACCAGTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035045.15 ENSMUST00000119472.8 ENSMUST00000122384.9 |
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