Pregenerated sensors for MRAP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042761Ensembl transcript IDs: ENSMUST00000049457.14, ENSMUST00000113149.8, ENSMUST00000179313.3
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTGACCCTCTCAGCTCCAAGCCAGGCAGCCGACACCCACACATCTaGCACGCAGACCATGGCAAGGAGCGTCTTGTTCTGAAGCCAAAG | + |
|
Preference number: 1 (lower is better) Translates to: TDPLSSKPGSRHPHI*HADHGKERLVLKPK Trigger: CTTTGGCTTCAGAACAAGACGCTCCTTGCCATGGTCTGCGTGGCAGATGTGTGGGTGTCGGCTGCCTGGCTTGGAGCTGAGAGGGTCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR CCA 90 bp | CTACACACACACACACACACACACACACACACACACACACGAGTGTaGGTAGCTTGCGGTTTCTTGCTGTACAGAGACAGAACACATCCT | + |
|
Preference number: 1 (lower is better) Translates to: LHTHTHTHTHTHTRV*VACGFLLYRDRTHP Trigger: AGGATGTGTTCTGTCTCTGTACAGCAAGAAACCGCAAGCTACCCACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR CCA 90 bp | TCATGTTGCTCAAATTATCATCGCAATCCTGAACATCTGCTACTGTaGCACAAACAACCCACTGACCCTCTCAGCTCCAAGCCAGGCAGC | + |
|
Preference number: 1 (lower is better) Translates to: SCCSNYHRNPEHLLL*HKQPTDPLSSKPGS Trigger: GCTGCCTGGCTTGGAGCTGAGAGGGTCAGTGGGTTGTTTGTGCCACAGTAGCAGATGTTCAGGATTGCGATGATAATTTGAGCAACATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR GCA 90 bp | CTCTCTGTGTGCAAGGCTGAGTTCTTTCCGACACCAGCAAAGGGTTaGTTCCTCCACGAAATGAACATCATGTTGCTCAAATTATCATCG | + |
|
Preference number: 1 (lower is better) Translates to: LSVCKAEFFPTPAKG*FLHEMNIMLLKLSS Trigger: CGATGATAATTTGAGCAACATGATGTTCATTTCGTGGAGGAAGCAACCCTTTGCTGGTGTCGGAAAGAACTCAGCCTTGCACACAGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR GCA 90 bp | AATGAACATCATGTTGCTCAAATTATCATCGCAATCCTGAACATCTaGTACTGTGGCACAAACAACCCACTGACCCTCTCAGCTCCAAGC | + |
|
Preference number: 1 (lower is better) Translates to: NEHHVAQIIIAILNI*YCGTNNPLTLSAPS Trigger: GCTTGGAGCTGAGAGGGTCAGTGGGTTGTTTGTGCCACAGTAGCAGATGTTCAGGATTGCGATGATAATTTGAGCAACATGATGTTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR TCA 90 bp | CTGAGTTCTTTCCGACACCAGCAAAGGGTTGCTTCCTCCACGAAATaGACATCATGTTGCTCAAATTATCATCGCAATCCTGAACATCTG | + |
|
Preference number: 1 (lower is better) Translates to: LSSFRHQQRVASSTK*TSCCSNYHRNPEHL Trigger: CAGATGTTCAGGATTGCGATGATAATTTGAGCAACATGATGTTCATTTCGTGGAGGAAGCAACCCTTTGCTGGTGTCGGAAAGAACTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR-3UTR CCA 90 bp | TGCTACTGTGGCACAAACAACCCACTGACCCTCTCAGCTCCAAGCCAGGCAGCCGTTACAGGCAGAGAATaGTGGGAAAGGGCTAGATCA | + |
|
Preference number: 2 (lower is better) Translates to: CYCGTNNPLTLSAPSQAAVTGRE*WERARS Trigger: TGATCTAGCCCTTTCCCACCATTCTCTGCCTGTAAC...GGCTGCCTGGCTTGGAGCTGAGAGGGTCAGTGGGTTGTTTGTGCCACAGTAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR-3UTR TCA 90 bp | TACAACTCTCTGTGTGCAAGGCTGAGTTCTTTCCGACACCAGCAAAGGGTTGCTCTGGAGAACCTGCCCTaGAAGCCAGGGTGCCATGTT | + |
|
Preference number: 2 (lower is better) Translates to: YNSLCARLSSFRHQQRVALENLP*KPGCHV Trigger: AACATGGCACCCTGGCTTTCAGGGCAGGTTCTCCAG...AGCAACCCTTTGCTGGTGTCGGAAAGAACTCAGCCTTGCACACAGAGAGTTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR-3UTR CCA 90 bp | TACAACTCTCTGTGTGCAAGGCTGAGTTCTTTCCGACACCAGCAAAGGGTTGCTGAGGGTACCAAGCCCTaGAGAACCTGCCCTGAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: YNSLCARLSSFRHQQRVAEGTKP*RTCPES Trigger: GCTTTCAGGGCAGGTTCTCCAGGGCTTGGTACCCTC...AGCAACCCTTTGCTGGTGTCGGAAAGAACTCAGCCTTGCACACAGAGAGTTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR CAA 90 bp | ACACACACACACACACACACACACACACACACGAGTGTGGGTAGCTaGCGGTTTCTTGCTGTACAGAGACAGAACACATCCTCAGTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: THTHTHTHTHTSVGS*RFLAVQRQNTSSVR Trigger: CCTTACTGAGGATGTGTTCTGTCTCTGTACAGCAAGAAACCGCAAGCTACCCACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR-3UTR CCA 90 bp | TGCCACCCATCGATTAGCAGCTGCTCATGCATACAACTCTCTGTGTGCAAGGCTGAACATCTGCTACTGTaGCACAAACAACCCACTGAC | + |
|
Preference number: 2 (lower is better) Translates to: CHPSISSCSCIQLSVCKAEHLLL*HKQPTD Trigger: GTCAGTGGGTTGTTTGTGCCACAGTAGCAGATGTTC...AGCCTTGCACACAGAGAGTTGTATGCATGAGCAGCTGCTAATCGATGGGTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR-3UTR TCA 90 bp | GGTTGCTTCCTCCACGAAATGAACATCATGTTGCTCAAATTATCATCGCAATCCTGTCCACAGTGCATGTaGGGCTCCTGTGCTCCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: GCFLHEMNIMLLKLSSQSCPQCM*GSCAPG Trigger: ACCAGGAGCACAGGAGCCTCACATGCACTGTGGACA...GGATTGCGATGATAATTTGAGCAACATGATGTTCATTTCGTGGAGGAAGCAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR-3UTR GCA 90 bp | AGCAAGACAAAGGGTGAACAAATTCGTAAAGTAGATGCCACCCATCGATTAGCACGACACCCACACATCTaGCACGCAGACCATGGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: SKTKGEQIRKVDATHRLARHPHI*HADHGK Trigger: CTTGCCATGGTCTGCGTGGCAGATGTGTGGGTGTCG...TGCTAATCGATGGGTGGCATCTACTTTACGAATTTGTTCACCCTTTGTCTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR-3UTR CCA 90 bp | ACATCATGTTGCTCAAATTATCATCGCAATCCTGAACATCTGCTACTGTGGCACGAGGGTACCAAGCCCTaGAGAACCTGCCCTGAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: TSCCSNYHRNPEHLLLWHEGTKP*RTCPES Trigger: GCTTTCAGGGCAGGTTCTCCAGGGCTTGGTACCCTC...GTGCCACAGTAGCAGATGTTCAGGATTGCGATGATAATTTGAGCAACATGATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR-3UTR TCA 90 bp | AAAGGGTTGCTTCCTCCACGAAATGAACATCATGTTGCTCAAATTATCATCGCACTGGAGAACCTGCCCTaGAAGCCAGGGTGCCATGTT | + |
|
Preference number: 2 (lower is better) Translates to: KGLLPPRNEHHVAQIIIALENLP*KPGCHV Trigger: AACATGGCACCCTGGCTTTCAGGGCAGGTTCTCCAG...TGCGATGATAATTTGAGCAACATGATGTTCATTTCGTGGAGGAAGCAACCCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR-3UTR TCA 90 bp | AAAGGGTTGCTTCCTCCACGAAATGAACATCATGTTGCTCAAATTATCATCGCATGTCCACAGTGCATGTaGGGCTCCTGTGCTCCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: KGLLPPRNEHHVAQIIIACPQCM*GSCAPG Trigger: ACCAGGAGCACAGGAGCCTCACATGCACTGTGGACA...TGCGATGATAATTTGAGCAACATGATGTTCATTTCGTGGAGGAAGCAACCCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR-3UTR GCA 90 bp | ACCATGGCAGTCCAGAGAGGTAAAGCAACTTGTTACAGGCAGAGAATGGTGGGACCCAAACCAAAATGGTaGCTTCCATCTCCAAATTCT | + |
|
Preference number: 2 (lower is better) Translates to: TMAVQRGKATCYRQRMVGPKPKW*LPSPNS Trigger: AGAATTTGGAGATGGAAGGCACCATTTTGGTTTGGG...TCCCACCATTCTCTGCCTGTAACAAGTTGCTTTACCTCTCTGGACTGCCATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR-3UTR GCA 90 bp | AAAGGGTTGCTTCCTCCACGAAATGAACATCATGTTGCTCAAATTATCATCGCACACTGGAGTCAAAGCTaGCCCAGTTTAAAGCCGGGG | + |
|
Preference number: 2 (lower is better) Translates to: KGLLPPRNEHHVAQIIIAHWSQS*PSLKPG Trigger: CCCCGGCTTTAAACTGGGGCAGCTTTGACTCCAGTG...TGCGATGATAATTTGAGCAACATGATGTTCATTTCGTGGAGGAAGCAACCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTACATGTAAAACCATGGCAGTCCAGAGAGGTAAAGCAACTTGTTACAGGCAGTCCATCTCCAAATTCTaGCCCTCTATCACATCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LTCKTMAVQRGKATCYRQSISKF*PSITSQ Trigger: CTGGGATGTGATAGAGGGGCAGAATTTGGAGATGGA...CTGCCTGTAACAAGTTGCTTTACCTCTCTGGACTGCCATGGTTTTACATGTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR-3UTR GCA 90 bp | ATAGGTCATCTACTCCAGACAGGCCACCTTACATGTAAAACCATGGCAGTCCAGCCCAAACCAAAATGGTaGCTTCCATCTCCAAATTCT | + |
|
Preference number: 2 (lower is better) Translates to: IGHLLQTGHLTCKTMAVQPKPKW*LPSPNS Trigger: AGAATTTGGAGATGGAAGGCACCATTTTGGTTTGGG...CTGGACTGCCATGGTTTTACATGTAAGGTGGCCTGTCTGGAGTAGATGACCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR-3UTR TCA 90 bp | ACATCATGTTGCTCAAATTATCATCGCAATCCTGAACATCTGCTACTGTGGCACAGGAGCGTCTTGTTCTaGAGCCAAAGAGTTCAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: TSCCSNYHRNPEHLLLWHRSVLF*SQRVQK Trigger: CTTCTGAACTCTTTGGCTTCAGAACAAGACGCTCCT...GTGCCACAGTAGCAGATGTTCAGGATTGCGATGATAATTTGAGCAACATGATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR-3UTR GCA 90 bp | AGCAAGACAAAGGGTGAACAAATTCGTAAAGTAGATGCCACCCATCGATTAGCATCCATCTCCAAATTCTaGCCCTCTATCACATCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: SKTKGEQIRKVDATHRLASISKF*PSITSQ Trigger: CTGGGATGTGATAGAGGGGCAGAATTTGGAGATGGA...TGCTAATCGATGGGTGGCATCTACTTTACGAATTTGTTCACCCTTTGTCTTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR-3UTR GCA 90 bp | AGCAAGACAAAGGGTGAACAAATTCGTAAAGTAGATGCCACCCATCGATTAGCACCCAAACCAAAATGGTaGCTTCCATCTCCAAATTCT | + |
|
Preference number: 2 (lower is better) Translates to: SKTKGEQIRKVDATHRLAPKPKW*LPSPNS Trigger: AGAATTTGGAGATGGAAGGCACCATTTTGGTTTGGG...TGCTAATCGATGGGTGGCATCTACTTTACGAATTTGTTCACCCTTTGTCTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR GCA 72 bp | CTCAGCTCCAAGCCAGGCAGCCGACACCCACACATCTaGCACGCAGACCATGGCAAGGAGCGTCTTGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LSSKPGSRHPHI*HADHGKERLVL Trigger: CAGAACAAGACGCTCCTTGCCATGGTCTGCGTGGCAGATGTGTGGGTGTCGGCTGCCTGGCTTGGAGCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR CCA 72 bp | AGGCAGCCGACACCCACACATCTGCCACGCAGACCATaGCAAGGAGCGTCTTGTTCTGAAGCCAAAGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: RQPTPTHLPRRP*QGASCSEAKEF Trigger: GAACTCTTTGGCTTCAGAACAAGACGCTCCTTGCCATGGTCTGCGTGGCAGATGTGTGGGTGTCGGCTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR TCA 72 bp | TCTGCCACGCAGACCATGGCAAGGAGCGTCTTGTTCTaGAGCCAAAGAGTTCAGAAGCGCGAGCACAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: SATQTMARSVLF*SQRVQKREHRM Trigger: CATCCTGTGCTCGCGCTTCTGAACTCTTTGGCTTCAGAACAAGACGCTCCTTGCCATGGTCTGCGTGGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR GCA 72 bp | ACAGGCAGAGAATGGTGGGAAAGGGCTAGATCAGACTaGAGTAACCTAACCCTCACCCAGGAGGGGGCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: TGREWWERARSD*SNLTLTQEGAQ Trigger: TTGAGCCCCCTCCTGGGTGAGGGTTAGGTTACTGCAGTCTGATCTAGCCCTTTCCCACCATTCTCTGCCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR GCA 72 bp | GCTGAGCAAAGGGAGGGTACCAAGCCCTGGAGAACCTaGCCTGAAAGCCAGGGTGCCATGTTCTATTATCTA | + |
|
Preference number: 3 (lower is better) Translates to: AEQREGTKPWRT*PESQGAMFYYL Trigger: TAGATAATAGAACATGGCACCCTGGCTTTCAGGGCAGGTTCTCCAGGGCTTGGTACCCTCCCTTTGCTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR TCA 72 bp | GCAAAGGGAGGGTACCAAGCCCTGGAGAACCTGCCCTaGAAGCCAGGGTGCCATGTTCTATTATCTACTGTT | + |
|
Preference number: 3 (lower is better) Translates to: AKGGYQALENLP*KPGCHVLLSTV Trigger: AACAGTAGATAATAGAACATGGCACCCTGGCTTTCAGGGCAGGTTCTCCAGGGCTTGGTACCCTCCCTTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR-3UTR CAA 90 bp | TGCCACCCATCGATTAGCAGCTGCTCATGCATACAACTCTCTGTGTGCAAGGCTGACACCAGCAAAGGGTaGCTTCCTCCACGAAATGAA | + |
|
Preference number: 3 (lower is better) Translates to: CHPSISSCSCIQLSVCKADTSKG*LPPRNE Trigger: TTCATTTCGTGGAGGAAGCAACCCTTTGCTGGTGTC...AGCCTTGCACACAGAGAGTTGTATGCATGAGCAGCTGCTAATCGATGGGTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR TCA 72 bp | CAGCTGCTCATGCATACAACTCTCTGTGTGCAAGGCTaGGTTCTTTCCGACACCAGCAAAGGGTTGCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: QLLMHTTLCVQG*VLSDTSKGLLP Trigger: AGGAAGCAACCCTTTGCTGGTGTCGGAAAGAACTCAGCCTTGCACACAGAGAGTTGTATGCATGAGCAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR CCA 72 bp | CACACACACACACACACACACACACACACACGAGTGTaGGTAGCTTGCGGTTTCTTGCTGTACAGAGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: HTHTHTHTHTRV*VACGFLLYRDR Trigger: TCTGTCTCTGTACAGCAAGAAACCGCAAGCTACCCACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR GCA 72 bp | TGCAAGGCTGAGTTCTTTCCGACACCAGCAAAGGGTTaGTTCCTCCACGAAATGAACATCATGTTGCTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: CKAEFFPTPAKG*FLHEMNIMLLK Trigger: TTTGAGCAACATGATGTTCATTTCGTGGAGGAAGCAACCCTTTGCTGGTGTCGGAAAGAACTCAGCCTTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR CCA 72 bp | ATCTACTCCAGACAGGCCACCTTACATGTAAAACCATaGCAGTCCAGAGAGGTAAAGCAACTTGTTACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: IYSRQATLHVKP*QSREVKQLVTG Trigger: GCCTGTAACAAGTTGCTTTACCTCTCTGGACTGCCATGGTTTTACATGTAAGGTGGCCTGTCTGGAGTAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR CCA 72 bp | TCAAATTATCATCGCAATCCTGAACATCTGCTACTGTaGCACAAACAACCCACTGACCCTCTCAGCTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: SNYHRNPEHLLL*HKQPTDPLSSK Trigger: CTTGGAGCTGAGAGGGTCAGTGGGTTGTTTGTGCCACAGTAGCAGATGTTCAGGATTGCGATGATAATTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR GCA 72 bp | CATGTTGCTCAAATTATCATCGCAATCCTGAACATCTaGTACTGTGGCACAAACAACCCACTGACCCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: HVAQIIIAILNI*YCGTNNPLTLS Trigger: TGAGAGGGTCAGTGGGTTGTTTGTGCCACAGTAGCAGATGTTCAGGATTGCGATGATAATTTGAGCAACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| 3UTR TCA 72 bp | TTCCGACACCAGCAAAGGGTTGCTTCCTCCACGAAATaGACATCATGTTGCTCAAATTATCATCGCAATCCT | + |
|
Preference number: 3 (lower is better) Translates to: FRHQQRVASSTK*TSCCSNYHRNP Trigger: AGGATTGCGATGATAATTTGAGCAACATGATGTTCATTTCGTGGAGGAAGCAACCCTTTGCTGGTGTCGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR CCA 90 bp | TGCTACTGTGGCACAAACAACCCACTGACCCTCTCAGCTCCAAGCCAGGCAGCCGACTCCGCGTTGTCTTaGTGTGGGGCACCTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CYCGTNNPLTLSAPSQAADSALS*CGAPVF Trigger: GAAGACAGGTGCCCCACACCAAGACAACGCGGAGTC...GGCTGCCTGGCTTGGAGCTGAGAGGGTCAGTGGGTTGTTTGTGCCACAGTAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR GCA 90 bp | GAAGGGCTGAGCAAAGGGAGGGTACCAAGCCCTGGAGAACCTGCCCTGAAAGCCACCTGGACTCCTCGTTaGCCTGACGAGAAAACACCT | + |
|
Preference number: 4 (lower is better) Translates to: EGLSKGRVPSPGEPALKATWTPR*PDEKTP Trigger: AGGTGTTTTCTCGTCAGGGCAACGAGGAGTCCAGGT...GGCTTTCAGGGCAGGTTCTCCAGGGCTTGGTACCCTCCCTTTGCTCAGCCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR CCA 90 bp | TGCTACTGTGGCACAAACAACCCACTGACCCTCTCAGCTCCAAGCCAGGCAGCCCTGGCTTCCTGGAGGTaGACATCACTGTCGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CYCGTNNPLTLSAPSQAALASWR*TSLSMA Trigger: AGCCATCGACAGTGATGTCCACCTCCAGGAAGCCAG...GGCTGCCTGGCTTGGAGCTGAGAGGGTCAGTGGGTTGTTTGTGCCACAGTAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR TCA 90 bp | TGCTACTGTGGCACAAACAACCCACTGACCCTCTCAGCTCCAAGCCAGGCAGCCGTCAGAGTTCGATGGTaGCTGTGGGGATGTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CYCGTNNPLTLSAPSQAAVRVRW*LWGCPV Trigger: AACAGGACATCCCCACAGTCACCATCGAACTCTGAC...GGCTGCCTGGCTTGGAGCTGAGAGGGTCAGTGGGTTGTTTGTGCCACAGTAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR GCA 90 bp | GAAGGGCTGAGCAAAGGGAGGGTACCAAGCCCTGGAGAACCTGCCCTGAAAGCCACACAAAGCTGTTCATaGGGAACCTCCTCTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGLSKGRVPSPGEPALKATQSCS*GTSSLR Trigger: CCTCAGAGAGGAGGTTCCGCATGAACAGCTTTGTGT...GGCTTTCAGGGCAGGTTCTCCAGGGCTTGGTACCCTCCCTTTGCTCAGCCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR CCA 90 bp | TCTCCAAATTCTGCCCCTCTATCACATCCCAGTCCTAGCCTAGTCCTCTCCCCCGACTCCGCGTTGTCTTaGTGTGGGGCACCTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPNSAPLSHPSPSLVLSPDSALS*CGAPVF Trigger: GAAGACAGGTGCCCCACACCAAGACAACGCGGAGTC...GGGGGAGAGGACTAGGCTAGGACTGGGATGTGATAGAGGGGCAGAATTTGGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR CCA 90 bp | AGCCGGGGTGGGTGGAGTTCATCACATAAACTGCTGCGGCAAAACTCGCAGAGAGACTCCGCGTTGTCTTaGTGTGGGGCACCTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRGGWSSSHKLLRQNSQRDSALS*CGAPVF Trigger: GAAGACAGGTGCCCCACACCAAGACAACGCGGAGTC...TCTCTGCGAGTTTTGCCGCAGCAGTTTATGTGATGAACTCCACCCACCCCGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR TCA 90 bp | TGCTACTGTGGCACAAACAACCCACTGACCCTCTCAGCTCCAAGCCAGGCAGCCGGATGTCAAACTTCATaGACCTGGCTAGCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CYCGTNNPLTLSAPSQAAGCQTS*TWLAPP Trigger: AGGAGGAGCTAGCCAGGTTCATGAAGTTTGACATCC...GGCTGCCTGGCTTGGAGCTGAGAGGGTCAGTGGGTTGTTTGTGCCACAGTAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR GCA 90 bp | TGCTACTGTGGCACAAACAACCCACTGACCCTCTCAGCTCCAAGCCAGGCAGCCTCCCCAAAGGAGCTCTaGTCTGTGTTCACAAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CYCGTNNPLTLSAPSQAASPKEL*SVFTKL Trigger: CAACTTTGTGAACACAGAGCAGAGCTCCTTTGGGGA...GGCTGCCTGGCTTGGAGCTGAGAGGGTCAGTGGGTTGTTTGTGCCACAGTAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR TCA 90 bp | AAAACTCGCAGAGACACTGTCCACAGTGCATGTGAGGCTCCTGTGCTCCTGGTAGTCAGAGTTCGATGGTaGCTGTGGGGATGTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KTRRDTVHSACEAPVLLVVRVRW*LWGCPV Trigger: AACAGGACATCCCCACAGTCACCATCGAACTCTGAC...TACCAGGAGCACAGGAGCCTCACATGCACTGTGGACAGTGTCTCTGCGAGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR TCA 90 bp | CACACGAGTGTGGGTAGCTTGCGGTTTCTTGCTGTACAGAGACAGAACACATCCAGAAAACACCTTGTCTaGCTCCAGCGGCTTCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: HTSVGSLRFLAVQRQNTSRKHLV*LQRLPE Trigger: TTCGGGAAGCCGCTGGAGTCAGACAAGGTGTTTTCT...GGATGTGTTCTGTCTCTGTACAGCAAGAAACCGCAAGCTACCCACACTCGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR TCA 90 bp | CACACGAGTGTGGGTAGCTTGCGGTTTCTTGCTGTACAGAGACAGAACACATCCGACTCCTCGTTGCCCTaGCGAGAAAACACCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HTSVGSLRFLAVQRQNTSDSSLP*RENTLS Trigger: AGACAAGGTGTTTTCTCGTCAGGGCAACGAGGAGTC...GGATGTGTTCTGTCTCTGTACAGCAAGAAACCGCAAGCTACCCACACTCGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR GCA 90 bp | TCTCCAAATTCTGCCCCTCTATCACATCCCAGTCCTAGCCTAGTCCTCTCCCCCTCCCCAAAGGAGCTCTaGTCTGTGTTCACAAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPNSAPLSHPSPSLVLSPSPKEL*SVFTKL Trigger: CAACTTTGTGAACACAGAGCAGAGCTCCTTTGGGGA...GGGGGAGAGGACTAGGCTAGGACTGGGATGTGATAGAGGGGCAGAATTTGGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR CCA 90 bp | ACCATGGCAGTCCAGAGAGGTAAAGCAACTTGTTACAGGCAGAGAATGGTGGGACTGGCTTCCTGGAGGTaGACATCACTGTCGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TMAVQRGKATCYRQRMVGLASWR*TSLSMA Trigger: AGCCATCGACAGTGATGTCCACCTCCAGGAAGCCAG...TCCCACCATTCTCTGCCTGTAACAAGTTGCTTTACCTCTCTGGACTGCCATGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR CCA 90 bp | TACAACTCTCTGTGTGCAAGGCTGAGTTCTTTCCGACACCAGCAAAGGGTTGCTCTTCTGCTGGCTTCCTaGAGGTGGACATCACTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: YNSLCARLSSFRHQQRVALLLAS*RWTSLS Trigger: CGACAGTGATGTCCACCTCCAGGAAGCCAGCAGAAG...AGCAACCCTTTGCTGGTGTCGGAAAGAACTCAGCCTTGCACACAGAGAGTTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR TCA 90 bp | ACCATGGCAGTCCAGAGAGGTAAAGCAACTTGTTACAGGCAGAGAATGGTGGGAAGAAAACACCTTGTCTaGCTCCAGCGGCTTCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: TMAVQRGKATCYRQRMVGRKHLV*LQRLPE Trigger: TTCGGGAAGCCGCTGGAGTCAGACAAGGTGTTTTCT...TCCCACCATTCTCTGCCTGTAACAAGTTGCTTTACCTCTCTGGACTGCCATGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR TCA 90 bp | CCATGGCAGTCCAGAGAGGTAAAGCAACTTGTTACAGGCAGAGAATGGTGGGAAGACTCCTCGTTGCCCTaGCGAGAAAACACCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PWQSREVKQLVTGREWWEDSSLP*RENTLS Trigger: AGACAAGGTGTTTTCTCGTCAGGGCAACGAGGAGTC...TTCCCACCATTCTCTGCCTGTAACAAGTTGCTTTACCTCTCTGGACTGCCATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR GCA 90 bp | TACAACTCTCTGTGTGCAAGGCTGAGTTCTTTCCGACACCAGCAAAGGGTTGCTACACAAAGCTGTTCATaGGGAACCTCCTCTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YNSLCARLSSFRHQQRVATQSCS*GTSSLR Trigger: CCTCAGAGAGGAGGTTCCGCATGAACAGCTTTGTGT...AGCAACCCTTTGCTGGTGTCGGAAAGAACTCAGCCTTGCACACAGAGAGTTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR TCA 90 bp | AGCCGGGGTGGGTGGAGTTCATCACATAAACTGCTGCGGCAAAACTCGCAGAGAAGTGTTCTACTTCATTaGTGTAACAGTGGAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SRGGWSSSHKLLRQNSQRSVLLH*CNSGTE Trigger: CTCTGTTCCACTGTTACATCAATGAAGTAGAACACT...TCTCTGCGAGTTTTGCCGCAGCAGTTTATGTGATGAACTCCACCCACCCCGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR CCA 90 bp | TGTAAAACCATGGCAGTCCAGAGAGGTAAAGCAACTTGTTACAGGCAGAGAATGCTTCTGCTGGCTTCCTaGAGGTGGACATCACTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: CKTMAVQRGKATCYRQRMLLLAS*RWTSLS Trigger: CGACAGTGATGTCCACCTCCAGGAAGCCAGCAGAAG...CATTCTCTGCCTGTAACAAGTTGCTTTACCTCTCTGGACTGCCATGGTTTTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR CCA 90 bp | AAAACTCGCAGAGACACTGTCCACAGTGCATGTGAGGCTCCTGTGCTCCTGGTATCTATGCGTGATGTCTaGGAAACTGGCTTGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KTRRDTVHSACEAPVLLVSMRDV*ETGLFS Trigger: AGAAAACAAGCCAGTTTCCCAGACATCACGCATAGA...TACCAGGAGCACAGGAGCCTCACATGCACTGTGGACAGTGTCTCTGCGAGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR GCA 90 bp | CATGTAAAACCATGGCAGTCCAGAGAGGTAAAGCAACTTGTTACAGGCAGAGAAACCTGGACTCCTCGTTaGCCTGACGAGAAAACACCT | + |
|
Preference number: 4 (lower is better) Translates to: HVKPWQSREVKQLVTGRETWTPR*PDEKTP Trigger: AGGTGTTTTCTCGTCAGGGCAACGAGGAGTCCAGGT...TTCTCTGCCTGTAACAAGTTGCTTTACCTCTCTGGACTGCCATGGTTTTACATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR CCA 90 bp | CCATGGCAGTCCAGAGAGGTAAAGCAACTTGTTACAGGCAGAGAATGGTGGGAATCGATGGCTGTTGTTTaGTGGCAAACTTTAACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PWQSREVKQLVTGREWWESMAVV*WQTLTL Trigger: CAGGGTTAAAGTTTGCCACCAAACAACAGCCATCGA...TTCCCACCATTCTCTGCCTGTAACAAGTTGCTTTACCTCTCTGGACTGCCATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR CCA 90 bp | TACAACTCTCTGTGTGCAAGGCTGAGTTCTTTCCGACACCAGCAAAGGGTTGCTTCGATGGCTGTTGTTTaGTGGCAAACTTTAACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YNSLCARLSSFRHQQRVASMAVV*WQTLTL Trigger: CAGGGTTAAAGTTTGCCACCAAACAACAGCCATCGA...AGCAACCCTTTGCTGGTGTCGGAAAGAACTCAGCCTTGCACACAGAGAGTTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR CCA 90 bp | GGTTGCTTCCTCCACGAAATGAACATCATGTTGCTCAAATTATCATCGCAATCCCTGGCTTCCTGGAGGTaGACATCACTGTCGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GCFLHEMNIMLLKLSSQSLASWR*TSLSMA Trigger: AGCCATCGACAGTGATGTCCACCTCCAGGAAGCCAG...GGATTGCGATGATAATTTGAGCAACATGATGTTCATTTCGTGGAGGAAGCAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR CCA 90 bp | ACATCATGTTGCTCAAATTATCATCGCAATCCTGAACATCTGCTACTGTGGCACCTTCTGCTGGCTTCCTaGAGGTGGACATCACTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: TSCCSNYHRNPEHLLLWHLLLAS*RWTSLS Trigger: CGACAGTGATGTCCACCTCCAGGAAGCCAGCAGAAG...GTGCCACAGTAGCAGATGTTCAGGATTGCGATGATAATTTGAGCAACATGATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR TCA 90 bp | AGCAAGACAAAGGGTGAACAAATTCGTAAAGTAGATGCCACCCATCGATTAGCAGTCAGAGTTCGATGGTaGCTGTGGGGATGTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SKTKGEQIRKVDATHRLAVRVRW*LWGCPV Trigger: AACAGGACATCCCCACAGTCACCATCGAACTCTGAC...TGCTAATCGATGGGTGGCATCTACTTTACGAATTTGTTCACCCTTTGTCTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR TCA 90 bp | AGCAAGACAAAGGGTGAACAAATTCGTAAAGTAGATGCCACCCATCGATTAGCAGACTCCTCGTTGCCCTaGCGAGAAAACACCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SKTKGEQIRKVDATHRLADSSLP*RENTLS Trigger: AGACAAGGTGTTTTCTCGTCAGGGCAACGAGGAGTC...TGCTAATCGATGGGTGGCATCTACTTTACGAATTTGTTCACCCTTTGTCTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR TCA 90 bp | CTTACATGTAAAACCATGGCAGTCCAGAGAGGTAAAGCAACTTGTTACAGGCAGGGATGTCAAACTTCATaGACCTGGCTAGCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LTCKTMAVQRGKATCYRQGCQTS*TWLAPP Trigger: AGGAGGAGCTAGCCAGGTTCATGAAGTTTGACATCC...CTGCCTGTAACAAGTTGCTTTACCTCTCTGGACTGCCATGGTTTTACATGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR TCA 90 bp | CATGTAAAACCATGGCAGTCCAGAGAGGTAAAGCAACTTGTTACAGGCAGAGAAGGATGTCAAACTTCATaGACCTGGCTAGCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HVKPWQSREVKQLVTGREGCQTS*TWLAPP Trigger: AGGAGGAGCTAGCCAGGTTCATGAAGTTTGACATCC...TTCTCTGCCTGTAACAAGTTGCTTTACCTCTCTGGACTGCCATGGTTTTACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR TCA 90 bp | AAAGGGTTGCTTCCTCCACGAAATGAACATCATGTTGCTCAAATTATCATCGCAAGAAAACACCTTGTCTaGCTCCAGCGGCTTCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: KGLLPPRNEHHVAQIIIARKHLV*LQRLPE Trigger: TTCGGGAAGCCGCTGGAGTCAGACAAGGTGTTTTCT...TGCGATGATAATTTGAGCAACATGATGTTCATTTCGTGGAGGAAGCAACCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR GCA 90 bp | GGTTGCTTCCTCCACGAAATGAACATCATGTTGCTCAAATTATCATCGCAATCCACACAAAGCTGTTCATaGGGAACCTCCTCTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GCFLHEMNIMLLKLSSQSTQSCS*GTSSLR Trigger: CCTCAGAGAGGAGGTTCCGCATGAACAGCTTTGTGT...GGATTGCGATGATAATTTGAGCAACATGATGTTCATTTCGTGGAGGAAGCAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR GCA 90 bp | CATGTAAAACCATGGCAGTCCAGAGAGGTAAAGCAACTTGTTACAGGCAGAGAATCCCCAAAGGAGCTCTaGTCTGTGTTCACAAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HVKPWQSREVKQLVTGRESPKEL*SVFTKL Trigger: CAACTTTGTGAACACAGAGCAGAGCTCCTTTGGGGA...TTCTCTGCCTGTAACAAGTTGCTTTACCTCTCTGGACTGCCATGGTTTTACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR TCA 90 bp | ACCATGGCAGTCCAGAGAGGTAAAGCAACTTGTTACAGGCAGAGAATGGTGGGAACAATGGAATATTTATaGGCCTTCAGTCCTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TMAVQRGKATCYRQRMVGTMEYL*AFSPSK Trigger: CTTTGAAGGACTGAAGGCTCATAAATATTCCATTGT...TCCCACCATTCTCTGCCTGTAACAAGTTGCTTTACCTCTCTGGACTGCCATGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR TCA 90 bp | CCATGGCAGTCCAGAGAGGTAAAGCAACTTGTTACAGGCAGAGAATGGTGGGAAACAATGGAATATTTATaGGCCTTCAGTCCTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PWQSREVKQLVTGREWWETMEYL*AFSPSK Trigger: CTTTGAAGGACTGAAGGCTCATAAATATTCCATTGT...TTCCCACCATTCTCTGCCTGTAACAAGTTGCTTTACCTCTCTGGACTGCCATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR TCA 90 bp | ATAGGTCATCTACTCCAGACAGGCCACCTTACATGTAAAACCATGGCAGTCCAGAGTGTTCTACTTCATTaGTGTAACAGTGGAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IGHLLQTGHLTCKTMAVQSVLLH*CNSGTE Trigger: CTCTGTTCCACTGTTACATCAATGAAGTAGAACACT...CTGGACTGCCATGGTTTTACATGTAAGGTGGCCTGTCTGGAGTAGATGACCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR CCA 90 bp | TCGATTAGCAGCTGCTCATGCATACAACTCTCTGTGTGCAAGGCTGAGTTCTTTTCTATGCGTGATGTCTaGGAAACTGGCTTGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SISSCSCIQLSVCKAEFFSMRDV*ETGLFS Trigger: AGAAAACAAGCCAGTTTCCCAGACATCACGCATAGA...AAAGAACTCAGCCTTGCACACAGAGAGTTGTATGCATGAGCAGCTGCTAATCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR CCA 90 bp | GGTTGCTTCCTCCACGAAATGAACATCATGTTGCTCAAATTATCATCGCAATCCTCGATGGCTGTTGTTTaGTGGCAAACTTTAACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GCFLHEMNIMLLKLSSQSSMAVV*WQTLTL Trigger: CAGGGTTAAAGTTTGCCACCAAACAACAGCCATCGA...GGATTGCGATGATAATTTGAGCAACATGATGTTCATTTCGTGGAGGAAGCAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR CCA 90 bp | TGTAAAACCATGGCAGTCCAGAGAGGTAAAGCAACTTGTTACAGGCAGAGAATGTCTATGCGTGATGTCTaGGAAACTGGCTTGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CKTMAVQRGKATCYRQRMSMRDV*ETGLFS Trigger: AGAAAACAAGCCAGTTTCCCAGACATCACGCATAGA...CATTCTCTGCCTGTAACAAGTTGCTTTACCTCTCTGGACTGCCATGGTTTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR CCA 90 bp | AGCAAGACAAAGGGTGAACAAATTCGTAAAGTAGATGCCACCCATCGATTAGCATCCTTCAAAGGAAACTaGTCCGATCTCATAGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: SKTKGEQIRKVDATHRLASFKGN*SDLIVL Trigger: GAGTACTATGAGATCGGACCAGTTTCCTTTGAAGGA...TGCTAATCGATGGGTGGCATCTACTTTACGAATTTGTTCACCCTTTGTCTTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR TCA 90 bp | AGCAAGACAAAGGGTGAACAAATTCGTAAAGTAGATGCCACCCATCGATTAGCAAGTGTTCTACTTCATTaGTGTAACAGTGGAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SKTKGEQIRKVDATHRLASVLLH*CNSGTE Trigger: CTCTGTTCCACTGTTACATCAATGAAGTAGAACACT...TGCTAATCGATGGGTGGCATCTACTTTACGAATTTGTTCACCCTTTGTCTTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR CCA 90 bp | AAAGGGTTGCTTCCTCCACGAAATGAACATCATGTTGCTCAAATTATCATCGCATCCTTCAAAGGAAACTaGTCCGATCTCATAGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: KGLLPPRNEHHVAQIIIASFKGN*SDLIVL Trigger: GAGTACTATGAGATCGGACCAGTTTCCTTTGAAGGA...TGCGATGATAATTTGAGCAACATGATGTTCATTTCGTGGAGGAAGCAACCCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS GCA 90 bp | TGTCTGACTCCAGCGGCTTCCCGAAGTCTGACACAAAGCTGTTCATaGGGAACCTCCTCTCTGAGGACTCCGCGTTGTCTTGGTGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CLTPAASRSLTQSCS*GTSSLRTPRCLGVG Trigger: CCCCACACCAAGACAACGCGGAGTCCTCAGAGAGGAGGTTCCGCATGAACAGCTTTGTGTCAGACTTCGGGAAGCCGCTGGAGTCAGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS TCA 90 bp | GATCTCATAGTACTCGTATTCCCAGGTGTAGTCAGAGTTCGATGGTaGCTGTGGGGATGTCCTGTTAGAAGCCAGCCTCTGGGCAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: DLIVLVFPGVVRVRW*LWGCPVRSQPLGRH Trigger: ATGTCTGCCCAGAGGCTGGCTTCTAACAGGACATCCCCACAGTCACCATCGAACTCTGACTACACCTGGGAATACGAGTACTATGAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS GCA 90 bp | ACGGGTGCTTCCGAAATCAGGAGATCATCCTCCCCAAAGGAGCTCTaGTCTGTGTTCACAAAGTTGGGGATGTCAAACTTCATGAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: TGASEIRRSSSPKEL*SVFTKLGMSNFMNL Trigger: CAGGTTCATGAAGTTTGACATCCCCAACTTTGTGAACACAGAGCAGAGCTCCTTTGGGGAGGATGATCTCCTGATTTCGGAAGCACCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR CAA 90 bp | TCTCCAAATTCTGCCCCTCTATCACATCCCAGTCCTAGCCTAGTCCTCTCCCCCTCTGTGTTCACAAAGTaGGGGATGTCAAACTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: SPNSAPLSHPSPSLVLSPSVFTK*GMSNFM Trigger: CATGAAGTTTGACATCCCCAACTTTGTGAACACAGA...GGGGGAGAGGACTAGGCTAGGACTGGGATGTGATAGAGGGGCAGAATTTGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR CAA 90 bp | ACCATGGCAGTCCAGAGAGGTAAAGCAACTTGTTACAGGCAGAGAATGGTGGGATCTGTGTTCACAAAGTaGGGGATGTCAAACTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: TMAVQRGKATCYRQRMVGSVFTK*GMSNFM Trigger: CATGAAGTTTGACATCCCCAACTTTGTGAACACAGA...TCCCACCATTCTCTGCCTGTAACAAGTTGCTTTACCTCTCTGGACTGCCATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR CAA 90 bp | CTTACATGTAAAACCATGGCAGTCCAGAGAGGTAAAGCAACTTGTTACAGGCAGGTCTGGGAAACTGGCTaGTTTTCTAGAAGAACGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LTCKTMAVQRGKATCYRQVWETG*FSRRTG Trigger: ACCCGTTCTTCTAGAAAACAAGCCAGTTTCCCAGAC...CTGCCTGTAACAAGTTGCTTTACCTCTCTGGACTGCCATGGTTTTACATGTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR CAA 90 bp | GGTTGCTTCCTCCACGAAATGAACATCATGTTGCTCAAATTATCATCGCAATCCGTCTGGGAAACTGGCTaGTTTTCTAGAAGAACGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GCFLHEMNIMLLKLSSQSVWETG*FSRRTG Trigger: ACCCGTTCTTCTAGAAAACAAGCCAGTTTCCCAGAC...GGATTGCGATGATAATTTGAGCAACATGATGTTCATTTCGTGGAGGAAGCAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS-3UTR CAA 90 bp | TGTAAAACCATGGCAGTCCAGAGAGGTAAAGCAACTTGTTACAGGCAGAGAATGTCTGTGTTCACAAAGTaGGGGATGTCAAACTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: CKTMAVQRGKATCYRQRMSVFTK*GMSNFM Trigger: CATGAAGTTTGACATCCCCAACTTTGTGAACACAGA...CATTCTCTGCCTGTAACAAGTTGCTTTACCTCTCTGGACTGCCATGGTTTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS GCA 72 bp | CCAGCGGCTTCCCGAAGTCTGACACAAAGCTGTTCATaGGGAACCTCCTCTCTGAGGACTCCGCGTTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PAASRSLTQSCS*GTSSLRTPRCL Trigger: AAGACAACGCGGAGTCCTCAGAGAGGAGGTTCCGCATGAACAGCTTTGTGTCAGACTTCGGGAAGCCGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS CCA 72 bp | TCAGGCCTCCCACTGCTTCTGCTGGCTTCCTGGAGGTaGACATCACTGTCGATGGCTGTTGTTTGGTGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SGLPLLLLASWR*TSLSMAVVWWQ Trigger: TTGCCACCAAACAACAGCCATCGACAGTGATGTCCACCTCCAGGAAGCCAGCAGAAGCAGTGGGAGGCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS CAA 72 bp | CAGTCCAGGTCTATGCGTGATGTCTGGGAAACTGGCTaGTTTTCTAGAAGAACGGGTGCTTCCGAAATCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QSRSMRDVWETG*FSRRTGASEIR Trigger: CCTGATTTCGGAAGCACCCGTTCTTCTAGAAAACAAGCCAGTTTCCCAGACATCACGCATAGACCTGGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS CCA 72 bp | TCCTGGAGGTGGACATCACTGTCGATGGCTGTTGTTTaGTGGCAAACTTTAACCCTGTCCAAGTGTTCTACT | + |
|
Preference number: 6 (lower is better) Translates to: SWRWTSLSMAVV*WQTLTLSKCST Trigger: AGTAGAACACTTGGACAGGGTTAAAGTTTGCCACCAAACAACAGCCATCGACAGTGATGTCCACCTCCAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||
| CDS CCA 72 bp | TGGAGGTGGACATCACTGTCGATGGCTGTTGTTTGGTaGCAAACTTTAACCCTGTCCAAGTGTTCTACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: WRWTSLSMAVVW*QTLTLSKCSTS Trigger: TGAAGTAGAACACTTGGACAGGGTTAAAGTTTGCCACCAAACAACAGCCATCGACAGTGATGTCCACCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049457.14 ENSMUST00000113149.8 ENSMUST00000179313.3 |
||