Pregenerated sensors for MRAP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039956Ensembl transcript IDs: ENSMUST00000038197.3, ENSMUST00000125429.3, ENSMUST00000138984.8
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCTGCAGGGAGGCCCTCCGGAGGCACAGAGGGAGGTTGAAGCTGTaGGTCCATGAACATATTGGCTGGGGTTGGGGACTGTGCCTCATC | + |
|
Preference number: 1 (lower is better) Translates to: VCREALRRHRGRLKL*VHEHIGWGWGLCLI Trigger: GATGAGGCACAGTCCCCAACCCCAGCCAATATGTTCATGGACTCACAGCTTCAACCTCCCTCTGTGCCTCCGGAGGGCCTCCCTGCAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125429.3 |
||
| 3UTR-3UTR TCA 90 bp | GTTGAGACGCTCTGTCTCCAGGCTCACCACTGCTTGAGTGTGAGGCCAGCTGATGAGTGTGAGGCCAGCTaGTGCCCTGGGACCTCCATC | + |
|
Preference number: 2 (lower is better) Translates to: VETLCLQAHHCLSVRPADECEAS*CPGTSI Trigger: GATGGAGGTCCCAGGGCATCAGCTGGCCTCACACTC...ATCAGCTGGCCTCACACTCAAGCAGTGGTGAGCCTGGAGACAGAGCGTCTCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038197.3 ENSMUST00000125429.3 |
||
| 3UTR-3UTR TCA 90 bp | GCTCACCACTGCTTGAGTGTGAGGCCAGCTGATGCCCTGGGACCTCCATCCTGGGGCACAGAGGGAGGTTaGAGCTGTGAGTCCATGAAC | + |
|
Preference number: 2 (lower is better) Translates to: AHHCLSVRPADALGPPSWGTEGG*SCESMN Trigger: GTTCATGGACTCACAGCTTCAACCTCCCTCTGTGCC...CCAGGATGGAGGTCCCAGGGCATCAGCTGGCCTCACACTCAAGCAGTGGTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125429.3 |
||
| 3UTR-3UTR CCA 90 bp | TGTTGTCTGCAGGGAGGCCCTCCGGAGGCACAGAGGGAGGTTGAAGCTGTGAGTACTGTGCCTCATCTGTaGGGAGCCCGACCAGGACAT | + |
|
Preference number: 2 (lower is better) Translates to: CCLQGGPPEAQREVEAVSTVPHL*GARPGH Trigger: ATGTCCTGGTCGGGCTCCCCACAGATGAGGCACAGT...ACTCACAGCTTCAACCTCCCTCTGTGCCTCCGGAGGGCCTCCCTGCAGACAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125429.3 |
||
| 3UTR-3UTR TCA 90 bp | CAACCACAGGGCGATGACAATGGAATTAAGCACAGAGCCCTGCAGTGCAGCCTTGAGTGTGAGGCCAGCTaGTGCCCTGGGACCTCCATC | + |
|
Preference number: 2 (lower is better) Translates to: QPQGDDNGIKHRALQCSLECEAS*CPGTSI Trigger: GATGGAGGTCCCAGGGCATCAGCTGGCCTCACACTC...AAGGCTGCACTGCAGGGCTCTGTGCTTAATTCCATTGTCATCGCCCTGTGGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125429.3 |
||
| 3UTR-3UTR TCA 90 bp | GCTCACCACTGCTTGAGTGTGAGGCCAGCTGATGCCCTGGGACCTCCATCCTGGACATGTAGAGCAGGATaGGAAAGAGGAGCACCACGA | + |
|
Preference number: 2 (lower is better) Translates to: AHHCLSVRPADALGPPSWTCRAG*ERGAPR Trigger: TCGTGGTGCTCCTCTTTCTCATCCTGCTCTACATGT...CCAGGATGGAGGTCCCAGGGCATCAGCTGGCCTCACACTCAAGCAGTGGTGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125429.3 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGACAGCTGTGTCCAGGGCAGCTCCTGCATCCTAGCTGCACTATCAATGTGGCCCGACTGGCTCTCTaGCATCATCCGTTCTACAGT | + |
|
Preference number: 2 (lower is better) Translates to: QRQLCPGQLLHPSCTINVARLAL*HHPFYS Trigger: ACTGTAGAACGGATGATGCCAGAGAGCCAGTCGGGC...CACATTGATAGTGCAGCTAGGATGCAGGAGCTGCCCTGGACACAGCTGTCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038197.3 ENSMUST00000125429.3 |
||
| 3UTR-3UTR TCA 90 bp | TGTGAGTCCATGAACATATTGGCTGGGGTTGGGGACTGTGCCTCATCTGTGGGGTCAACCACAGGGCGATaGCAATGGAATCTGCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: CESMNILAGVGDCASSVGSTTGR*QWNLQE Trigger: TTCCTGCAGATTCCATTGTCATCGCCCTGTGGTTGA...CCCCACAGATGAGGCACAGTCCCCAACCCCAGCCAATATGTTCATGGACTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000138984.8 |
||
| 3UTR-3UTR CCA 90 bp | AACTTGGTTTTGTCCCGGTCAGTTTCCTGCTATATTCAAGGCCATTGTAAACGGGGCCAGCTGATGCCCTaGGACCTCCATCCTGGACCT | + |
|
Preference number: 2 (lower is better) Translates to: NLVLSRSVSCYIQGHCKRGQLMP*DLHPGP Trigger: AGGTCCAGGATGGAGGTCCCAGGGCATCAGCTGGCC...CCGTTTACAATGGCCTTGAATATAGCAGGAAACTGACCGGGACAAAACCAAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038197.3 ENSMUST00000125429.3 |
||
| 3UTR-3UTR CCA 90 bp | TTTTGTCCCGGTCAGTTTCCTGCTATATTCAAGGCCATTGTAAACGGCCCTAAAGCCCGACTGGCTCTCTaGCATCATCCGTTCTACAGT | + |
|
Preference number: 2 (lower is better) Translates to: FCPGQFPAIFKAIVNGPKARLAL*HHPFYS Trigger: ACTGTAGAACGGATGATGCCAGAGAGCCAGTCGGGC...TTTAGGGCCGTTTACAATGGCCTTGAATATAGCAGGAAACTGACCGGGACAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038197.3 ENSMUST00000125429.3 |
||
| 3UTR-3UTR CCA 90 bp | TGCATCCTAGCTGCACTATCAATGTGTGTGATGGTCCTCTTTGTAAACTTGGTTCATATTGGCTGGGGTTaGGGACTGTGCCTCATCTGT | + |
|
Preference number: 2 (lower is better) Translates to: CILAALSMCVMVLFVNLVHIGWG*GLCLIC Trigger: ACAGATGAGGCACAGTCCCCAACCCCAGCCAATATG...AACCAAGTTTACAAAGAGGACCATCACACACATTGATAGTGCAGCTAGGATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125429.3 |
||
| 3UTR-3UTR CCA 90 bp | TGCATCCTAGCTGCACTATCAATGTGTGTGATGGTCCTCTTTGTAAACTTGGTTCATGAACATATTGGCTaGGGTTGGGGACTGTGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: CILAALSMCVMVLFVNLVHEHIG*GWGLCL Trigger: GAGGCACAGTCCCCAACCCCAGCCAATATGTTCATG...AACCAAGTTTACAAAGAGGACCATCACACACATTGATAGTGCAGCTAGGATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125429.3 |
||
| 3UTR CAA 90 bp | GCTGCACTATCAATGTGTGTGATGGTCCTCTTTGTAAACTTGGTTTaGTCCCGGTCAGTTTCCTGCTATATTCAAGGCCATTGTAAACGG | + |
|
Preference number: 2 (lower is better) Translates to: AALSMCVMVLFVNLV*SRSVSCYIQGHCKR Trigger: CCGTTTACAATGGCCTTGAATATAGCAGGAAACTGACCGGGACAAAACCAAGTTTACAAAGAGGACCATCACACACATTGATAGTGCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038197.3 ENSMUST00000125429.3 |
||
| 3UTR-3UTR GCA 90 bp | TTGGTTTTGTCCCGGTCAGTTTCCTGCTATATTCAAGGCCATTGTAAACGGCCCTCTGTTAGTGTGAATTaGTACACAGATGTTGAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: LVLSRSVSCYIQGHCKRPSVSVN*YTDVES Trigger: GCTCTCAACATCTGTGTAGCAATTCACACTAACAGA...GGGCCGTTTACAATGGCCTTGAATATAGCAGGAAACTGACCGGGACAAAACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125429.3 |
||
| 3UTR CAA 90 bp | ATCCTAGCTGCACTATCAATGTGTGTGATGGTCCTCTTTGTAAACTaGGTTTTGTCCCGGTCAGTTTCCTGCTATATTCAAGGCCATTGT | + |
|
Preference number: 2 (lower is better) Translates to: ILAALSMCVMVLFVN*VLSRSVSCYIQGHC Trigger: ACAATGGCCTTGAATATAGCAGGAAACTGACCGGGACAAAACCAAGTTTACAAAGAGGACCATCACACACATTGATAGTGCAGCTAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038197.3 ENSMUST00000125429.3 |
||
| 3UTR TCA 72 bp | GAGGCCCTCCGGAGGCACAGAGGGAGGTTGAAGCTGTaGGTCCATGAACATATTGGCTGGGGTTGGGGACTG | + |
|
Preference number: 3 (lower is better) Translates to: EALRRHRGRLKL*VHEHIGWGWGL Trigger: CAGTCCCCAACCCCAGCCAATATGTTCATGGACTCACAGCTTCAACCTCCCTCTGTGCCTCCGGAGGGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125429.3 |
||
| 3UTR TCA 72 bp | GCCCGACTGGCTCTCTGGCATCATCCGTTCTACAGTTaGGACGCTCTGTCTCCAGGCTCACCACTGCTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: ARLALWHHPFYS*DALSPGSPLLE Trigger: CTCAAGCAGTGGTGAGCCTGGAGACAGAGCGTCTCAACTGTAGAACGGATGATGCCAGAGAGCCAGTCGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038197.3 ENSMUST00000125429.3 |
||
| 3UTR CCA 72 bp | ACATATTGGCTGGGGTTGGGGACTGTGCCTCATCTGTaGGGAGCCCGACCAGGACATGTAGAGCAGGATGAG | + |
|
Preference number: 3 (lower is better) Translates to: TYWLGLGTVPHL*GARPGHVEQDE Trigger: CTCATCCTGCTCTACATGTCCTGGTCGGGCTCCCCACAGATGAGGCACAGTCCCCAACCCCAGCCAATATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000125429.3 ENSMUST00000138984.8 |
||
| 3UTR TCA 72 bp | CCGGAGGCACAGAGGGAGGTTGAAGCTGTGAGTCCATaGACATATTGGCTGGGGTTGGGGACTGTGCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: PEAQREVEAVSP*TYWLGLGTVPH Trigger: ATGAGGCACAGTCCCCAACCCCAGCCAATATGTTCATGGACTCACAGCTTCAACCTCCCTCTGTGCCTCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125429.3 |
||
| 3UTR GCA 72 bp | CAGCCGAATGGTCCTCAGCCAGAAGTCAGGAGACAGTaGATCCCAGAGCCAGTGACTGTGTGGAAATGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: QPNGPQPEVRRQ*IPEPVTVWKWC Trigger: ACACCATTTCCACACAGTCACTGGCTCTGGGATGCACTGTCTCCTGACTTCTGGCTGAGGACCATTCGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138984.8 |
||
| 3UTR GCA 72 bp | AGACAGCTGTGTCCAGGGCAGCTCCTGCATCCTAGCTaGACTATCAATGTGTGTGATGGTCCTCTTTGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: RQLCPGQLLHPS*TINVCDGPLCK Trigger: TTTACAAAGAGGACCATCACACACATTGATAGTGCAGCTAGGATGCAGGAGCTGCCCTGGACACAGCTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038197.3 ENSMUST00000125429.3 |
||
| 3UTR-3UTR CAA 90 bp | AGCTGTGTCCAGGGCAGCTCCTGCATCCTAGCTGCACTATCAATGTGTGTGATGATTGCTACACAGATGTaGAGAGCTAGCACAAAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: SCVQGSSCILAALSMCVMIATQM*RASTKD Trigger: GTCTTTTGTGCTAGCTCTCAACATCTGTGTAGCAAT...CATCACACACATTGATAGTGCAGCTAGGATGCAGGAGCTGCCCTGGACACAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125429.3 |
||
| CDS-3UTR GCA 90 bp | GCTCACCACTGCTTGAGTGTGAGGCCAGCTGATGCCCTGGGACCTCCATCCTGGTTAACCACTGGTCAGTaGCAGCTCTCCTTCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AHHCLSVRPADALGPPSWLTTGQ*QLSFLA Trigger: AGCCAGGAAGGAGAGCTGGCACTGACCAGTGGTTAA...CCAGGATGGAGGTCCCAGGGCATCAGCTGGCCTCACACTCAAGCAGTGGTGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038197.3 |
||
| CDS-3UTR CCA 90 bp | AGAGACAGCTGTGTCCAGGGCAGCTCCTGCATCCTAGCTGCACTATCAATGTGTACTGTGCCTCATCTGTaGGGAGCCCGACCAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: RDSCVQGSSCILAALSMCTVPHL*GARPGH Trigger: ATGTCCTGGTCGGGCTCCCCACAGATGAGGCACAGT...ACACATTGATAGTGCAGCTAGGATGCAGGAGCTGCCCTGGACACAGCTGTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038197.3 |
||
| CDS-3UTR TCA 90 bp | CTTGCTCAACAGAGACAGCTGTGTCCAGGGCAGCTCCTGCATCCTAGCTGCACTTCAACCACAGGGCGATaGCAATGGAATGCTTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LAQQRQLCPGQLLHPSCTSTTGR*QWNACW Trigger: CCAACAAGCATTCCATTGTCATCGCCCTGTGGTTGA...AGTGCAGCTAGGATGCAGGAGCTGCCCTGGACACAGCTGTCTCTGTTGAGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038197.3 |
||
| CDS-3UTR GCA 90 bp | TTTTGTCCCGGTCAGTTTCCTGCTATATTCAAGGCCATTGTAAACGGCCCTAAAGGCTCCTCTGTTGTCTaGAGGGAGGCCCTCCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FCPGQFPAIFKAIVNGPKGSSVV*REALRR Trigger: CCTCCGGAGGGCCTCCCTGCAGACAACAGAGGAGCC...TTTAGGGCCGTTTACAATGGCCTTGAATATAGCAGGAAACTGACCGGGACAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038197.3 |
||
| CDS-3UTR CCA 90 bp | CAGCTGTGTCCAGGGCAGCTCCTGCATCCTAGCTGCACTATCAATGTGTGTGATCATATTGGCTGGGGTTaGGGACTGTGCCTCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QLCPGQLLHPSCTINVCDHIGWG*GLCLIC Trigger: ACAGATGAGGCACAGTCCCCAACCCCAGCCAATATG...ATCACACACATTGATAGTGCAGCTAGGATGCAGGAGCTGCCCTGGACACAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038197.3 |
||
| CDS-3UTR CCA 90 bp | AGCTGTGTCCAGGGCAGCTCCTGCATCCTAGCTGCACTATCAATGTGTGTGATGTGCTGCGTTAACCACTaGTCAGTGCCAGCTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SCVQGSSCILAALSMCVMCCVNH*SVPALL Trigger: AAGGAGAGCTGGCACTGACCAGTGGTTAACGCAGCA...CATCACACACATTGATAGTGCAGCTAGGATGCAGGAGCTGCCCTGGACACAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038197.3 |
||
| CDS-3UTR TCA 90 bp | TTGGTTTTGTCCCGGTCAGTTTCCTGCTATATTCAAGGCCATTGTAAACGGCCCGGCACAGAGGGAGGTTaGAGCTGTGAGTCCATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LVLSRSVSCYIQGHCKRPGTEGG*SCESMN Trigger: GTTCATGGACTCACAGCTTCAACCTCCCTCTGTGCC...GGGCCGTTTACAATGGCCTTGAATATAGCAGGAAACTGACCGGGACAAAACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038197.3 |
||
| CDS-3UTR CCA 90 bp | CTTGCTCAACAGAGACAGCTGTGTCCAGGGCAGCTCCTGCATCCTAGCTGCACTCAATGGAATGCTTGTTaGCTTTCAGCTTCTTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LAQQRQLCPGQLLHPSCTQWNAC*LSASSR Trigger: ACGAGAAGAAGCTGAAAGCCAACAAGCATTCCATTG...AGTGCAGCTAGGATGCAGGAGCTGCCCTGGACACAGCTGTCTCTGTTGAGCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038197.3 |
||
| CDS-3UTR CCA 90 bp | TTTTGTCCCGGTCAGTTTCCTGCTATATTCAAGGCCATTGTAAACGGCCCTAAACATGAACATATTGGCTaGGGTTGGGGACTGTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FCPGQFPAIFKAIVNGPKHEHIG*GWGLCL Trigger: GAGGCACAGTCCCCAACCCCAGCCAATATGTTCATG...TTTAGGGCCGTTTACAATGGCCTTGAATATAGCAGGAAACTGACCGGGACAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038197.3 |
||
| CDS-3UTR TCA 90 bp | TTTTGTCCCGGTCAGTTTCCTGCTATATTCAAGGCCATTGTAAACGGCCCTAAAACATGTAGAGCAGGATaGGAAAGAGGAGCACCACGA | + |
|
Preference number: 4 (lower is better) Translates to: FCPGQFPAIFKAIVNGPKTCRAG*ERGAPR Trigger: TCGTGGTGCTCCTCTTTCTCATCCTGCTCTACATGT...TTTAGGGCCGTTTACAATGGCCTTGAATATAGCAGGAAACTGACCGGGACAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038197.3 |
||
| 3UTR CAA 72 bp | TCAATGTGTGTGATGGTCCTCTTTGTAAACTTGGTTTaGTCCCGGTCAGTTTCCTGCTATATTCAAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SMCVMVLFVNLV*SRSVSCYIQGH Trigger: ATGGCCTTGAATATAGCAGGAAACTGACCGGGACAAAACCAAGTTTACAAAGAGGACCATCACACACATTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038197.3 ENSMUST00000125429.3 |
||
| CDS-3UTR CAA 90 bp | TCCTGCATCCTAGCTGCACTATCAATGTGTGTGATGGTCCTCTTTGTAAACTTGTTCCTGGCTCCTCTGTaGTCTGCAGGGAGGCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SCILAALSMCVMVLFVNLFLAPL*SAGRPS Trigger: GGAGGGCCTCCCTGCAGACAACAGAGGAGCCAGGAA...CAAGTTTACAAAGAGGACCATCACACACATTGATAGTGCAGCTAGGATGCAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038197.3 |
||
| CDS-3UTR CAA 90 bp | CATCCTAGCTGCACTATCAATGTGTGTGATGGTCCTCTTTGTAAACTTGGTTTTGAGTCCATGAACATATaGGCTGGGGTTGGGGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: HPSCTINVCDGPLCKLGFESMNI*AGVGDC Trigger: ACAGTCCCCAACCCCAGCCAATATGTTCATGGACTC...AAAACCAAGTTTACAAAGAGGACCATCACACACATTGATAGTGCAGCTAGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038197.3 |
||
| CDS-3UTR CAA 90 bp | TGCATCCTAGCTGCACTATCAATGTGTGTGATGGTCCTCTTTGTAAACTTGGTTACAATGGAATGCTTGTaGGCTTTCAGCTTCTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: CILAALSMCVMVLFVNLVTMECL*AFSFFS Trigger: CGAGAAGAAGCTGAAAGCCAACAAGCATTCCATTGT...AACCAAGTTTACAAAGAGGACCATCACACACATTGATAGTGCAGCTAGGATGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038197.3 |
||