Pregenerated sensors for MPZL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070305Ensembl transcript IDs: ENSMUST00000114663.4, ENSMUST00000114664.8
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTTGAACCAACCAGGGCTGGGGGAGGGGTCATCAGTGACTCTCTCTaGAGAGCGCTGTTTGCTCACATGCTCGTCCTTCCGATAAGTCAG | + |
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Preference number: 1 (lower is better) Translates to: VEPTRAGGGVISDSL*RALFAHMLVLPISQ Trigger: CTGACTTATCGGAAGGACGAGCATGTGAGCAAACAGCGCTCTCCAGAGAGAGTCACTGATGACCCCTCCCCCAGCCCTGGTTGGTTCAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR GCA 90 bp | GGCCCACAGCATGCCCCCTCCCAACTGGGTCACTCTCTTCAGATCTaGACGTGCCCAAGGTATTCATGCTTGGTGCACGAATGTTTTCTT | + |
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Preference number: 1 (lower is better) Translates to: GPQHAPSQLGHSLQI*TCPRYSCLVHECFL Trigger: AAGAAAACATTCGTGCACCAAGCATGAATACCTTGGGCACGTGCAGATCTGAAGAGAGTGACCCAGTTGGGAGGGGGCATGCTGTGGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR TCA 90 bp | GGCAGCAGGATCGGAGTAGCTCTCAGAGAAAGGATGTCTGTGATGTaGGTGGGGAATTTCTCCAGCCCACATCTCCATGCCCTTTTTAGT | + |
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Preference number: 1 (lower is better) Translates to: GSRIGVALRERMSVM*VGNFSSPHLHALFS Trigger: ACTAAAAAGGGCATGGAGATGTGGGCTGGAGAAATTCCCCACTCACATCACAGACATCCTTTCTCTGAGAGCTACTCCGATCCTGCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114663.4 |
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| 3UTR TCA 90 bp | GTGTGGAGGCCAACACCGGAGTGGGCACTTCTGGCAGCAAAGTTGTaGGCTGTGCAATTAAATAAGAGCTTTGATCTACTCCATGGATCT | + |
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Preference number: 1 (lower is better) Translates to: VWRPTPEWALLAAKL*AVQLNKSFDLLHGS Trigger: AGATCCATGGAGTAGATCAAAGCTCTTATTTAATTGCACAGCTCACAACTTTGCTGCCAGAAGTGCCCACTCCGGTGTTGGCCTCCACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR CCA 90 bp | TGGGTCACTCTCTTCAGATCTGCACGTGCCCAAGGTATTCATGCTTaGTGCACGAATGTTTTCTTTTCTCTATTGGACCATCAGAACGGG | + |
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Preference number: 1 (lower is better) Translates to: WVTLFRSARAQGIHA*CTNVFFSLLDHQNG Trigger: CCCGTTCTGATGGTCCAATAGAGAAAAGAAAACATTCGTGCACCAAGCATGAATACCTTGGGCACGTGCAGATCTGAAGAGAGTGACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR GCA 90 bp | GTCACTCTCTTCAGATCTGCACGTGCCCAAGGTATTCATGCTTGGTaGACGAATGTTTTCTTTTCTCTATTGGACCATCAGAACGGGTCT | + |
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Preference number: 1 (lower is better) Translates to: VTLFRSARAQGIHAW*TNVFFSLLDHQNGS Trigger: AGACCCGTTCTGATGGTCCAATAGAGAAAAGAAAACATTCGTGCACCAAGCATGAATACCTTGGGCACGTGCAGATCTGAAGAGAGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR GCA 90 bp | CAACTGGGTCACTCTCTTCAGATCTGCACGTGCCCAAGGTATTCATaGTTGGTGCACGAATGTTTTCTTTTCTCTATTGGACCATCAGAA | + |
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Preference number: 1 (lower is better) Translates to: QLGHSLQICTCPRYS*LVHECFLFSIGPSE Trigger: TTCTGATGGTCCAATAGAGAAAAGAAAACATTCGTGCACCAAGCATGAATACCTTGGGCACGTGCAGATCTGAAGAGAGTGACCCAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR TCA 90 bp | CAAGGTGCAAAGAAGTTTATTAACTACAGTGCAGTAAAGCTTCCATaGGTCACAATGTCTGTGCACAAAGCCTTACAGTTCATACTCTCC | + |
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Preference number: 1 (lower is better) Translates to: QGAKKFINYSAVKLP*VTMSVHKALQFILS Trigger: GGAGAGTATGAACTGTAAGGCTTTGTGCACAGACATTGTGACTCATGGAAGCTTTACTGCACTGTAGTTAATAAACTTCTTTGCACCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR GCA 90 bp | GGTGATATAACCATAATGAAAGACTTAAATCCTCTTTCCAGACAATaGTATAATGCGCTGGGGTTTGAGTCCACAGAGCATCAAAAAGGG | + |
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Preference number: 1 (lower is better) Translates to: GDITIMKDLNPLSRQ*YNALGFESTEHQKG Trigger: CCCTTTTTGATGCTCTGTGGACTCAAACCCCAGCGCATTATAGCATTGTCTGGAAAGAGGATTTAAGTCTTTCATTATGGTTATATCACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCCAGGCCCTCCTCTGCCTCTTGCAAGAGCTTCCATGACCAGAGGCAAATCATGCTGTCCCCGCCAATaGCACTCCTGGCCAGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: MPGPPLPLARASMTRGKSCCPRQ*HSWPGE Trigger: TTCCCCTGGCCAGGAGTGCCATTGGCGGGGACAGCA...TGATTTGCCTCTGGTCATGGAAGCTCTTGCAAGAGGCAGAGGAGGGCCTGGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR-3UTR GCA 90 bp | GCCCCCTCCCAACTGGGTCACTCTCTTCAGATCTGCACGTGCCCAAGGTATTCACTTTCTCATCTCCAGTaGCGAGCAAACCAGCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: APSQLGHSLQICTCPRYSLSHLQ*RANQPA Trigger: TGCAGGCTGGTTTGCTCGGCACTGGAGATGAGAAAG...TGAATACCTTGGGCACGTGCAGATCTGAAGAGAGTGACCCAGTTGGGAGGGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR CAA 90 bp | GAGGCCTCGCAAGCTGCTTTAAGAAGAACCATGAAGACCACCATGTaGAACCAACCAGGGCTGGGGGAGGGGTCATCAGTGACTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: EASQAALRRTMKTTM*NQPGLGEGSSVTLS Trigger: AGAGAGAGTCACTGATGACCCCTCCCCCAGCCCTGGTTGGTTCAACATGGTGGTCTTCATGGTTCTTCTTAAAGCAGCTTGCGAGGCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR-3UTR TCA 90 bp | GAACCAACCAGGGCTGGGGGAGGGGTCATCAGTGACTCTCTCTGGAGAGCGCTGTCTTCAATAAATAAGTaGTCCTTAGGGTCTTCACTG | + |
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Preference number: 2 (lower is better) Translates to: EPTRAGGGVISDSLWRALSSINK*SLGSSL Trigger: CAGTGAAGACCCTAAGGATCACTTATTTATTGAAGA...CAGCGCTCTCCAGAGAGAGTCACTGATGACCCCTCCCCCAGCCCTGGTTGGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR-3UTR TCA 90 bp | AGTGGGGTTGCTGATACTGATGGACGCATCCCCTTTGTAGACATTTCCGGCCCAGAGAAAGGATGTCTGTaGTGTGAGTGGGGAATTTCT | + |
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Preference number: 2 (lower is better) Translates to: SGVADTDGRIPFVDISGPEKGCL*CEWGIS Trigger: AGAAATTCCCCACTCACATCACAGACATCCTTTCTC...TGGGCCGGAAATGTCTACAAAGGGGATGCGTCCATCAGTATCAGCAACCCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114663.4 |
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| 3UTR CAA 90 bp | CTGGGTCACTCTCTTCAGATCTGCACGTGCCCAAGGTATTCATGCTaGGTGCACGAATGTTTTCTTTTCTCTATTGGACCATCAGAACGG | + |
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Preference number: 2 (lower is better) Translates to: LGHSLQICTCPRYSC*VHECFLFSIGPSER Trigger: CCGTTCTGATGGTCCAATAGAGAAAAGAAAACATTCGTGCACCAAGCATGAATACCTTGGGCACGTGCAGATCTGAAGAGAGTGACCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCAACACAACAGAACATTCTGGATCAAGATGTGGCCTCCAGGTTTTCTGTTGATCAGTGACTCTCTCTaGAGAGCGCTGTTTGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: QQHNRTFWIKMWPPGFLLISDSL*RALFAH Trigger: GTGAGCAAACAGCGCTCTCCAGAGAGAGTCACTGAT...CAACAGAAAACCTGGAGGCCACATCTTGATCCAGAATGTTCTGTTGTGTTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGTCCTTCTTCAGAATGGGGGAGCCCAGCAACACAACAGAACATTCTGGATCACAACACAAGAAACGTaGAAGACCCAAAGCAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: RVLLQNGGAQQHNRTFWITTQET*KTQSKG Trigger: TCCTTTGCTTTGGGTCTTTCACGTTTCTTGTGTTGT...GATCCAGAATGTTCTGTTGTGTTGCTGGGCTCCCCCATTCTGAAGAAGGACTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR-3UTR TCA 90 bp | GCACACACATGTATATATGCACATAAGCAGGATGGGAGAAGGGTAGGCAACTTTTTTCCTGTTGTTAGGTaGCACTTCTTGCATGGCGCA | + |
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Preference number: 2 (lower is better) Translates to: AHTCIYAHKQDGRRVGNFFPVVR*HFLHGA Trigger: TGCGCCATGCAAGAAGTGTCACCTAACAACAGGAAA...AAAGTTGCCTACCCTTCTCCCATCCTGCTTATGTGCATATATACATGTGTGTGC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGGATCAAGATGTGGCCTCCAGGTTTTCTGTTGTTGTAAGATATACATATGCATGCCCCCTCCCAACTaGGTCACTCTCTTCAGATCT | + |
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Preference number: 2 (lower is better) Translates to: SGSRCGLQVFCCCKIYICMPPPN*VTLFRS Trigger: AGATCTGAAGAGAGTGACCCAGTTGGGAGGGGGCAT...GCATATGTATATCTTACAACAACAGAAAACCTGGAGGCCACATCTTGATCCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR-3UTR GCA 90 bp | AGCTTCCATGAGTCACAATGTCTGTGCACAAAGCCTTACAGTTCATACTCTCCTATCGGGGTTAAATACTaGATGTCCCCTAAACACAGC | + |
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Preference number: 2 (lower is better) Translates to: SFHESQCLCTKPYSSYSPIGVKY*MSPKHS Trigger: GCTGTGTTTAGGGGACATGCAGTATTTAACCCCGAT...AGGAGAGTATGAACTGTAAGGCTTTGTGCACAGACATTGTGACTCATGGAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGGATCAAGATGTGGCCTCCAGGTTTTCTGTTGTTGTAAGATATACATATGCGGGCGTGTTGTTCGTTaGCACATCATCAGGAAGCTA | + |
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Preference number: 2 (lower is better) Translates to: SGSRCGLQVFCCCKIYICGRVVR*HIIRKL Trigger: TAGCTTCCTGATGATGTGCCAACGAACAACACGCCC...GCATATGTATATCTTACAACAACAGAAAACCTGGAGGCCACATCTTGATCCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR-3UTR CCA 90 bp | CTAAGTGTATGCTCACTCTTAAAGGAGGAGGGCTCCACAGATGGCTTTGTCTTCCAAGGTATTCATGCTTaGTGCACGAATGTTTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: LSVCSLLKEEGSTDGFVFQGIHA*CTNVFF Trigger: AAAGAAAACATTCGTGCACCAAGCATGAATACCTTG...GAAGACAAAGCCATCTGTGGAGCCCTCCTCCTTTAAGAGTGAGCATACACTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR CCA 72 bp | ACCAGGGCTGGGGGAGGGGTCATCAGTGACTCTCTCTaGAGAGCGCTGTTTGCTCACATGCTCGTCCTTCCG | + |
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Preference number: 3 (lower is better) Translates to: TRAGGGVISDSL*RALFAHMLVLP Trigger: CGGAAGGACGAGCATGTGAGCAAACAGCGCTCTCCAGAGAGAGTCACTGATGACCCCTCCCCCAGCCCTGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR GCA 72 bp | GGGTCTTCACTGGTGACCTTCAGGATCTTCTGTCACTaGTGTCCCCGCCAATGGCACTCCTGGCCAGGGGAA | + |
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Preference number: 3 (lower is better) Translates to: GSSLVTFRIFCH*CPRQWHSWPGE Trigger: TTCCCCTGGCCAGGAGTGCCATTGGCGGGGACAGCAGTGACAGAAGATCCTGAAGGTCACCAGTGAAGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR CCA 72 bp | CAGAACAGTGAGGCCCACAGCATGCCCCCTCCCAACTaGGTCACTCTCTTCAGATCTGCACGTGCCCAAGGT | + |
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Preference number: 3 (lower is better) Translates to: QNSEAHSMPPPN*VTLFRSARAQG Trigger: ACCTTGGGCACGTGCAGATCTGAAGAGAGTGACCCAGTTGGGAGGGGGCATGCTGTGGGCCTCACTGTTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR GCA 72 bp | AGACATTTCCGGCCCAGGAGATCCGGTCTCGGAATGTaGCCGCTGTGGTCGGGTACTGGAAAGACTGATAGT | + |
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Preference number: 3 (lower is better) Translates to: RHFRPRRSGLGM*PLWSGTGKTDS Trigger: ACTATCAGTCTTTCCAGTACCCGACCACAGCGGGCACATTCCGAGACCGGATCTCCTGGGCCGGAAATGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114663.4 |
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| 3UTR TCA 72 bp | AAGCAGGATGGGAGAAGGGTAGGCAACTTTTCCTTCTaGAGTCCCACTGCTGACTTGGGCACTGCAGACCGC | + |
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Preference number: 3 (lower is better) Translates to: KQDGRRVGNFSF*SPTADLGTADR Trigger: GCGGTCTGCAGTGCCCAAGTCAGCAGTGGGACTTCAGAAGGAAAAGTTGCCTACCCTTCTCCCATCCTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR GCA 72 bp | CATGCCCCCTCCCAACTGGGTCACTCTCTTCAGATCTaGACGTGCCCAAGGTATTCATGCTTGGTGCACGAA | + |
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Preference number: 3 (lower is better) Translates to: HAPSQLGHSLQI*TCPRYSCLVHE Trigger: TTCGTGCACCAAGCATGAATACCTTGGGCACGTGCAGATCTGAAGAGAGTGACCCAGTTGGGAGGGGGCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR CCA 72 bp | ACCTTCAGGATCTTCTGTCACTGCTGTCCCCGCCAATaGCACTCCTGGCCAGGGGAATGGGTATTTCCTGTT | + |
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Preference number: 3 (lower is better) Translates to: TFRIFCHCCPRQ*HSWPGEWVFPV Trigger: AACAGGAAATACCCATTCCCCTGGCCAGGAGTGCCATTGGCGGGGACAGCAGTGACAGAAGATCCTGAAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR GCA 72 bp | CTTGTAATGACTGTCAGAACAGTGAGGCCCACAGCATaGCCCCTCCCAACTGGGTCACTCTCTTCAGATCTG | + |
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Preference number: 3 (lower is better) Translates to: LVMTVRTVRPTA*PLPTGSLSSDL Trigger: CAGATCTGAAGAGAGTGACCCAGTTGGGAGGGGGCATGCTGTGGGCCTCACTGTTCTGACAGTCATTACAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR CCA 72 bp | CCAAGGCTATCCATCCCGAATGGGCGTGTTGTTCGTTaGCACATCATCAGGAAGCTACCAGCTCCACACCAT | + |
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Preference number: 3 (lower is better) Translates to: PRLSIPNGRVVR*HIIRKLPAPHH Trigger: ATGGTGTGGAGCTGGTAGCTTCCTGATGATGTGCCAACGAACAACACGCCCATTCGGGATGGATAGCCTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR TCA 72 bp | ATCGGAGTAGCTCTCAGAGAAAGGATGTCTGTGATGTaGGTGGGGAATTTCTCCAGCCCACATCTCCATGCC | + |
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Preference number: 3 (lower is better) Translates to: IGVALRERMSVM*VGNFSSPHLHA Trigger: GGCATGGAGATGTGGGCTGGAGAAATTCCCCACTCACATCACAGACATCCTTTCTCTGAGAGCTACTCCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114663.4 |
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| 3UTR-3UTR CAA 90 bp | AATATGGAGGCCTCGCAAGCTGCTTTAAGAAGAACCATGAAGACCACCATGTTGTCTGGAGAGCGCTGTTaGCTCACATGCTCGTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: NMEASQAALRRTMKTTMLSGERC*LTCSSF Trigger: GAAGGACGAGCATGTGAGCAAACAGCGCTCTCCAGA...CAACATGGTGGTCTTCATGGTTCTTCTTAAAGCAGCTTGCGAGGCCTCCATATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR-3UTR CAA 90 bp | GACTTAAATCCTCTTTCCAGACAATGCTATAATGCGCTGGGGTTTGAGTCCACACAGAGTGACAGACATTaGGTCTCCTTCAGGCAACTG | + |
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Preference number: 3 (lower is better) Translates to: DLNPLSRQCYNALGFESTQSDRH*VSFRQL Trigger: CAGTTGCCTGAAGGAGACCAAATGTCTGTCACTCTG...TGTGGACTCAAACCCCAGCGCATTATAGCATTGTCTGGAAAGAGGATTTAAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR TCA 72 bp | CCAACACCGGAGTGGGCACTTCTGGCAGCAAAGTTGTaGGCTGTGCAATTAAATAAGAGCTTTGATCTACTC | + |
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Preference number: 3 (lower is better) Translates to: PTPEWALLAAKL*AVQLNKSFDLL Trigger: GAGTAGATCAAAGCTCTTATTTAATTGCACAGCTCACAACTTTGCTGCCAGAAGTGCCCACTCCGGTGTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR CCA 72 bp | TTCTCTATTGGACCATCAGAACGGGTCTCACTGGCTTaGCCACAGACAACTACATCTTTAACAAGTAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: FSIGPSERVSLA*PQTTTSLTSSP Trigger: TGGGCTACTTGTTAAAGATGTAGTTGTCTGTGGCCAAGCCAGTGAGACCCGTTCTGATGGTCCAATAGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR CCA 72 bp | TTCATGCTTGGTGCACGAATGTTTTCTTTTCTCTATTaGACCATCAGAACGGGTCTCACTGGCTTGGCCACA | + |
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Preference number: 3 (lower is better) Translates to: FMLGARMFSFLY*TIRTGLTGLAT Trigger: TGTGGCCAAGCCAGTGAGACCCGTTCTGATGGTCCAATAGAGAAAAGAAAACATTCGTGCACCAAGCATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR TCA 72 bp | GACATTTGGTCTCCTTCAGGCAACTGGAAGAAACCATaGACTACATTCAAGAGTGAAGGTAACCCAAGCACT | + |
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Preference number: 3 (lower is better) Translates to: DIWSPSGNWKKP*TTFKSEGNPST Trigger: AGTGCTTGGGTTACCTTCACTCTTGAATGTAGTTCATGGTTTCTTCCAGTTGCCTGAAGGAGACCAAATGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR GCA 72 bp | TTCAGATCTGCACGTGCCCAAGGTATTCATGCTTGGTaGACGAATGTTTTCTTTTCTCTATTGGACCATCAG | + |
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Preference number: 3 (lower is better) Translates to: FRSARAQGIHAW*TNVFFSLLDHQ Trigger: CTGATGGTCCAATAGAGAAAAGAAAACATTCGTGCACCAAGCATGAATACCTTGGGCACGTGCAGATCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR GCA 72 bp | CACTCTCTTCAGATCTGCACGTGCCCAAGGTATTCATaGTTGGTGCACGAATGTTTTCTTTTCTCTATTGGA | + |
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Preference number: 3 (lower is better) Translates to: HSLQICTCPRYS*LVHECFLFSIG Trigger: TCCAATAGAGAAAAGAAAACATTCGTGCACCAAGCATGAATACCTTGGGCACGTGCAGATCTGAAGAGAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR GCA 72 bp | ATTAAAACAGTAAGTCAGACAAACCCTCTAAGTGTATaGTCACTCTTAAAGGAGGAGGGCTCCACAGATGGC | + |
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Preference number: 3 (lower is better) Translates to: IKTVSQTNPLSV*SLLKEEGSTDG Trigger: GCCATCTGTGGAGCCCTCCTCCTTTAAGAGTGAGCATACACTTAGAGGGTTTGTCTGACTTACTGTTTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR-3UTR CAA 90 bp | GCACACACATGTATATATGCACATAAGCAGGATGGGAGAAGGGTAGGCAACTTTAAAACTGCTCCCTCATaGCCACAGAATGATGGTTTA | + |
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Preference number: 3 (lower is better) Translates to: AHTCIYAHKQDGRRVGNFKTAPS*PQNDGL Trigger: TAAACCATCATTCTGTGGCAATGAGGGAGCAGTTTT...AAAGTTGCCTACCCTTCTCCCATCCTGCTTATGTGCATATATACATGTGTGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR GCA 72 bp | ACCATAATGAAAGACTTAAATCCTCTTTCCAGACAATaGTATAATGCGCTGGGGTTTGAGTCCACAGAGCAT | + |
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Preference number: 3 (lower is better) Translates to: TIMKDLNPLSRQ*YNALGFESTEH Trigger: ATGCTCTGTGGACTCAAACCCCAGCGCATTATAGCATTGTCTGGAAAGAGGATTTAAGTCTTTCATTATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR TCA 72 bp | TATAAATACAACATAAACGTTTCTTCAATAAATAAGTaGTCCTTAGGGTCTTCACTGGTGACCTTCAGGATC | + |
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Preference number: 3 (lower is better) Translates to: YKYNINVSSINK*SLGSSLVTFRI Trigger: GATCCTGAAGGTCACCAGTGAAGACCCTAAGGATCACTTATTTATTGAAGAAACGTTTATGTTGTATTTATA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| CDS-3UTR CCA 90 bp | GAACCAACCAGGGCTGGGGGAGGGGTCATCAGTGACTCTCTCTGGAGAGCGCTGGGAATGTGCCCGCTGTaGTCGGGTACTGGAAAGACT | + |
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Preference number: 4 (lower is better) Translates to: EPTRAGGGVISDSLWRALGMCPL*SGTGKT Trigger: AGTCTTTCCAGTACCCGACCACAGCGGGCACATTCC...CAGCGCTCTCCAGAGAGAGTCACTGATGACCCCTCCCCCAGCCCTGGTTGGTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR CAA 72 bp | ACCAAGGCTATCCATCCCGAATGGGCGTGTTGTTCGTaGGCACATCATCAGGAAGCTACCAGCTCCACACCA | + |
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Preference number: 4 (lower is better) Translates to: TKAIHPEWACCS*AHHQEATSSTP Trigger: TGGTGTGGAGCTGGTAGCTTCCTGATGATGTGCCAACGAACAACACGCCCATTCGGGATGGATAGCCTTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| CDS-3UTR GCA 90 bp | AAAATGCCAGGCCCTCCTCTGCCTCTTGCAAGAGCTTCCATGACCAGAGGCAAATCTTATAGCCAGACCTaGTCCTCTTCTGCACCCCTG | + |
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Preference number: 4 (lower is better) Translates to: KMPGPPLPLARASMTRGKSYSQT*SSSAPL Trigger: CAGGGGTGCAGAAGAGGAGCAGGTCTGGCTATAAGA...TTTGCCTCTGGTCATGGAAGCTCTTGCAAGAGGCAGAGGAGGGCCTGGCATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR CAA 72 bp | CAAGCTGCTTTAAGAAGAACCATGAAGACCACCATGTaGAACCAACCAGGGCTGGGGGAGGGGTCATCAGTG | + |
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Preference number: 4 (lower is better) Translates to: QAALRRTMKTTM*NQPGLGEGSSV Trigger: CACTGATGACCCCTCCCCCAGCCCTGGTTGGTTCAACATGGTGGTCTTCATGGTTCTTCTTAAAGCAGCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR CAA 72 bp | AATGGCACTCCTGGCCAGGGGAATGGGTATTTCCTGTaGTTAGGTGACACTTCTTGCATGGCGCACACTTCA | + |
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Preference number: 4 (lower is better) Translates to: NGTPGQGNGYFL*LGDTSCMAHTS Trigger: TGAAGTGTGCGCCATGCAAGAAGTGTCACCTAACAACAGGAAATACCCATTCCCCTGGCCAGGAGTGCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| CDS-3UTR GCA 90 bp | GCACACACATGTATATATGCACATAAGCAGGATGGGAGAAGGGTAGGCAACTTTCTTCTGCACCCCTGTTaGCTTCCTCCCCATTCGCAC | + |
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Preference number: 4 (lower is better) Translates to: AHTCIYAHKQDGRRVGNFLLHPC*LPPHSH Trigger: GTGCGAATGGGGAGGAAGGCAACAGGGGTGCAGAAG...AAAGTTGCCTACCCTTCTCCCATCCTGCTTATGTGCATATATACATGTGTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR CAA 72 bp | TGTCTTCCTGATGATCAAAAAGCTTTAGCACAAACCTaGGCAGAGGAAACTGAGGGCAGCCTAAGCCCCGAT | + |
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Preference number: 4 (lower is better) Translates to: CLPDDQKALAQT*AEETEGSLSPD Trigger: ATCGGGGCTTAGGCTGCCCTCAGTTTCCTCTGCCAAGGTTTGTGCTAAAGCTTTTTGATCATCAGGAAGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| CDS-3UTR TCA 90 bp | CTAAGTGTATGCTCACTCTTAAAGGAGGAGGGCTCCACAGATGGCTTTGTCTTCTCTTCACAGCACAGCTaGACGTCCCATTGTCCTTTA | + |
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Preference number: 4 (lower is better) Translates to: LSVCSLLKEEGSTDGFVFSSQHS*TSHCPL Trigger: TAAAGGACAATGGGACGTTCAGCTGTGCTGTGAAGA...GAAGACAAAGCCATCTGTGGAGCCCTCCTCCTTTAAGAGTGAGCATACACTTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| CDS-3UTR CCA 90 bp | CTAAGTGTATGCTCACTCTTAAAGGAGGAGGGCTCCACAGATGGCTTTGTCTTCTCATTGCTGTCCTCCTaGTCAGTGTCATCGGAAACT | + |
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Preference number: 4 (lower is better) Translates to: LSVCSLLKEEGSTDGFVFSLLSS*SVSSET Trigger: AGTTTCCGATGACACTGACCAGGAGGACAGCAATGA...GAAGACAAAGCCATCTGTGGAGCCCTCCTCCTTTAAGAGTGAGCATACACTTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| CDS-3UTR CCA 90 bp | TCTGGATCAAGATGTGGCCTCCAGGTTTTCTGTTGTTGTAAGATATACATATGCCCACAGAAGACAGCATaGTGCCGAACCCCCTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: SGSRCGLQVFCCCKIYICPQKTA*CRTPFL Trigger: CAGAAAGGGGGTTCGGCACCATGCTGTCTTCTGTGG...GCATATGTATATCTTACAACAACAGAAAACCTGGAGGCCACATCTTGATCCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR CAA 72 bp | ATTCATGCTTGGTGCACGAATGTTTTCTTTTCTCTATaGGACCATCAGAACGGGTCTCACTGGCTTGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: IHAWCTNVFFSL*DHQNGSHWLGH Trigger: GTGGCCAAGCCAGTGAGACCCGTTCTGATGGTCCAATAGAGAAAAGAAAACATTCGTGCACCAAGCATGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| CDS-3UTR GCA 90 bp | ACTTCTGGTGCCACTGAGAACCAAAGTTCTAAACAACACAAGAAACGTGAAAGATCGTCATGCAGTCATTaGTGTCCTCCTGGTCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: TSGATENQSSKQHKKRERSSCSH*CPPGQC Trigger: ACACTGACCAGGAGGACAGCAATGACTGCATGACGA...TCTTTCACGTTTCTTGTGTTGTTTAGAACTTTGGTTCTCAGTGGCACCAGAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR CAA 72 bp | AAAGTACAATTTTGGCATCGGCAGAGTGACAGACATTaGGTCTCCTTCAGGCAACTGGAAGAAACCATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KVQFWHRQSDRH*VSFRQLEETMN Trigger: GTTCATGGTTTCTTCCAGTTGCCTGAAGGAGACCAAATGTCTGTCACTCTGCCGATGCCAAAATTGTACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR CAA 72 bp | TCTCTTCAGATCTGCACGTGCCCAAGGTATTCATGCTaGGTGCACGAATGTTTTCTTTTCTCTATTGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: SLQICTCPRYSC*VHECFLFSIGP Trigger: TGGTCCAATAGAGAAAAGAAAACATTCGTGCACCAAGCATGAATACCTTGGGCACGTGCAGATCTGAAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| 3UTR CAA 72 bp | ATCCTCTTTCCAGACAATGCTATAATGCGCTGGGGTTaGAGTCCACAGAGCATCAAAAAGGGAAACAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ILFPDNAIMRWG*SPQSIKKGNKV Trigger: TACTTTGTTTCCCTTTTTGATGCTCTGTGGACTCAAACCCCAGCGCATTATAGCATTGTCTGGAAAGAGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| CDS-3UTR CCA 90 bp | ACTTCTGGTGCCACTGAGAACCAAAGTTCTAAACAACACAAGAAACGTGAAAGACATCGGAAACTTCAATaGAAGACTTCTTATAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TSGATENQSSKQHKKRERHRKLQ*KTSYSQ Trigger: CTGGCTATAAGAAGTCTTCCATTGAAGTTTCCGATG...TCTTTCACGTTTCTTGTGTTGTTTAGAACTTTGGTTCTCAGTGGCACCAGAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| CDS TCA 90 bp | TGCCTTCCTCCCCATTCGCACCAGCAGCAGAATGACCACCACTGCTaGGGGGACGAAGACGAGGATGGAGAGAAGGGCCACAGAAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: CLPPHSHQQQNDHHC*GDEDEDGEKGHRRQ Trigger: CTGTCTTCTGTGGCCCTTCTCTCCATCCTCGTCTTCGTCCCCTCAGCAGTGGTGGTCATTCTGCTGCTGGTGCGAATGGGGAGGAAGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| CDS-3UTR CAA 90 bp | GAACCAACCAGGGCTGGGGGAGGGGTCATCAGTGACTCTCTCTGGAGAGCGCTGTCTGTTAGGGGGATATaGTGGTACACGTCTGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: EPTRAGGGVISDSLWRALSVRGI*WYTSGG Trigger: CCCTCCAGACGTGTACCACAATATCCCCCTAACAGA...CAGCGCTCTCCAGAGAGAGTCACTGATGACCCCTCCCCCAGCCCTGGTTGGTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| CDS GCA 90 bp | TTATCTCCAAGGAGAGGACGATACGCGCACCCTGGACGACTAGGATaGTCAGCAGTGGAAAGAGAGCGCAGCCACGGCCTCCTACTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSPRRGRYAHPGRLG*SAVERERSHGLLLF Trigger: GAACAGTAGGAGGCCGTGGCTGCGCTCTCTTTCCACTGCTGAGCATCCTAGTCGTCCAGGGTGCGCGTATCGTCCTCTCCTTGGAGATAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114663.4 ENSMUST00000114664.8 |
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| CDS GCA 90 bp | GGAAGACTTCTTATAGCCAGACCTGCTCCTCTTCTGCACCCCTGTTaGCTTCCTCCCCATTCGCACCAGCAGCAGAATGACCACCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: GRLLIARPAPLLHPC*LPPHSHQQQNDHHC Trigger: GCAGTGGTGGTCATTCTGCTGCTGGTGCGAATGGGGAGGAAGGCAACAGGGGTGCAGAAGAGGAGCAGGTCTGGCTATAAGAAGTCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| CDS CCA 90 bp | CCGAACCCCCTTTCTGTGACCGTGAGCTCTGTTAGGGGGATATTGTaGTACACGTCTGGAGGGTTCTTCACAGCACAGCTGAACGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PNPLSVTVSSVRGIL*YTSGGFFTAQLNVP Trigger: TGGGACGTTCAGCTGTGCTGTGAAGAACCCTCCAGACGTGTACCACAATATCCCCCTAACAGAGCTCACGGTCACAGAAAGGGGGTTCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| CDS-3UTR CAA 90 bp | ATGAGTTCTTGTAATGACTGTCAGAACAGTGAGGCCCACAGCATGCCCCCTCCCCTCGTCATGCAGTCATaGCTGTCCTCCTGGTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: MSSCNDCQNSEAHSMPPPLVMQS*LSSWSV Trigger: CACTGACCAGGAGGACAGCAATGACTGCATGACGAG...GGGAGGGGGCATGCTGTGGGCCTCACTGTTCTGACAGTCATTACAAGAACTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| CDS-3UTR CAA 90 bp | GAACCAACCAGGGCTGGGGGAGGGGTCATCAGTGACTCTCTCTGGAGAGCGCTGACATCTGAAGATGACTaGAAGGTGCATTTCAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: EPTRAGGGVISDSLWRALTSEDD*KVHFNL Trigger: CAAGTTGAAATGCACCTTCAAGTCATCTTCAGATGT...CAGCGCTCTCCAGAGAGAGTCACTGATGACCCCTCCCCCAGCCCTGGTTGGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| CDS GCA 90 bp | CAGTGTCATCGGAAACTTCAATGGAAGACTTCTTATAGCCAGACCTaGTCCTCTTCTGCACCCCTGTTGCCTTCCTCCCCATTCGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: QCHRKLQWKTSYSQT*SSSAPLLPSSPFAP Trigger: TGGTGCGAATGGGGAGGAAGGCAACAGGGGTGCAGAAGAGGAGCAGGTCTGGCTATAAGAAGTCTTCCATTGAAGTTTCCGATGACACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| CDS GCA 90 bp | CCAGACACTCTGCACAGCGGACACAAAGCCTCGTCATGCAGTCATTaGTGTCCTCCTGGTCAGTGTCATCGGAAACTTCAATGGAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: PDTLHSGHKASSCSH*CPPGQCHRKLQWKT Trigger: AGTCTTCCATTGAAGTTTCCGATGACACTGACCAGGAGGACAGCAATGACTGCATGACGAGGCTTTGTGTCCGCTGTGCAGAGTGTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| CDS-3UTR CAA 90 bp | AAAATGCCAGGCCCTCCTCTGCCTCTTGCAAGAGCTTCCATGACCAGAGGCAAATCCTTTAGAGTGGGGTaGCTGATACTGATGGACGCA | + |
|
Preference number: 5 (lower is better) Translates to: KMPGPPLPLARASMTRGKSFRVG*LILMDA Trigger: TGCGTCCATCAGTATCAGCAACCCCACTCTAAAGGA...TTTGCCTCTGGTCATGGAAGCTCTTGCAAGAGGCAGAGGAGGGCCTGGCATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| CDS GCA 90 bp | AGTCTGAATCCAGACACTCTGCACAGCGGACACAAAGCCTCGTCATaGAGTCATTGCTGTCCTCCTGGTCAGTGTCATCGGAAACTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SLNPDTLHSGHKASS*SHCCPPGQCHRKLQ Trigger: TTGAAGTTTCCGATGACACTGACCAGGAGGACAGCAATGACTGCATGACGAGGCTTTGTGTCCGCTGTGCAGAGTGTCTGGATTCAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| CDS CCA 90 bp | TGCAGTCATTGCTGTCCTCCTGGTCAGTGTCATCGGAAACTTCAATaGAAGACTTCTTATAGCCAGACCTGCTCCTCTTCTGCACCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: CSHCCPPGQCHRKLQ*KTSYSQTCSSSAPL Trigger: CAGGGGTGCAGAAGAGGAGCAGGTCTGGCTATAAGAAGTCTTCCATTGAAGTTTCCGATGACACTGACCAGGAGGACAGCAATGACTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| CDS-3UTR CAA 90 bp | TCTTCACTGGTGACCTTCAGGATCTTCTGTCACTGCTGTCCCCGCCAATGGCACCAGTCTATGGTCAGCTaGTCAGTGACATCTGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SSLVTFRIFCHCCPRQWHQSMVS*SVTSED Trigger: ATCTTCAGATGTCACTGACAAGCTGACCATAGACTG...GTGCCATTGGCGGGGACAGCAGTGACAGAAGATCCTGAAGGTCACCAGTGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| CDS-3UTR CAA 90 bp | CAGCAGGATCGGAGTAGCTCTCAGAGAAAGGATGTCTGTGATGTGAGTGGGGAACAGTCTATGGTCAGCTaGTCAGTGACATCTGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: QQDRSSSQRKDVCDVSGEQSMVS*SVTSED Trigger: ATCTTCAGATGTCACTGACAAGCTGACCATAGACTG...TTCCCCACTCACATCACAGACATCCTTTCTCTGAGAGCTACTCCGATCCTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114663.4 |
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| CDS-3UTR CAA 90 bp | AATCCACTGAGGCAGCAGGATCGGAGTAGCTCTCAGAGAAAGGATGTCTGTGATACATCTGAAGATGACTaGAAGGTGCATTTCAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: NPLRQQDRSSSQRKDVCDTSEDD*KVHFNL Trigger: CAAGTTGAAATGCACCTTCAAGTCATCTTCAGATGT...ATCACAGACATCCTTTCTCTGAGAGCTACTCCGATCCTGCTGCCTCAGTGGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114663.4 |
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| CDS GCA 72 bp | AGGAGAGGACGATACGCGCACCCTGGACGACTAGGATaGTCAGCAGTGGAAAGAGAGCGCAGCCACGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RRGRYAHPGRLG*SAVERERSHGL Trigger: GAGGCCGTGGCTGCGCTCTCTTTCCACTGCTGAGCATCCTAGTCGTCCAGGGTGCGCGTATCGTCCTCTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114663.4 ENSMUST00000114664.8 |
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| CDS GCA 72 bp | CTTATAGCCAGACCTGCTCCTCTTCTGCACCCCTGTTaGCTTCCTCCCCATTCGCACCAGCAGCAGAATGAC | + |
|
Preference number: 6 (lower is better) Translates to: LIARPAPLLHPC*LPPHSHQQQND Trigger: GTCATTCTGCTGCTGGTGCGAATGGGGAGGAAGGCAACAGGGGTGCAGAAGAGGAGCAGGTCTGGCTATAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| CDS GCA 72 bp | CCAGACACTCTGCACAGCGGACACAAAGCCTCGTCATaGAGTCATTGCTGTCCTCCTGGTCAGTGTCATCGG | + |
|
Preference number: 6 (lower is better) Translates to: PDTLHSGHKASS*SHCCPPGQCHR Trigger: CCGATGACACTGACCAGGAGGACAGCAATGACTGCATGACGAGGCTTTGTGTCCGCTGTGCAGAGTGTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| CDS CCA 72 bp | GCACTTATCTCCAAGGAGAGGACGATACGCGCACCCTaGACGACTAGGATGCTCAGCAGTGGAAAGAGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: ALISKERTIRAP*TTRMLSSGKRA Trigger: CGCTCTCTTTCCACTGCTGAGCATCCTAGTCGTCCAGGGTGCGCGTATCGTCCTCTCCTTGGAGATAAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114663.4 ENSMUST00000114664.8 |
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| CDS GCA 72 bp | CTGCACAGCGGACACAAAGCCTCGTCATGCAGTCATTaGTGTCCTCCTGGTCAGTGTCATCGGAAACTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: LHSGHKASSCSH*CPPGQCHRKLQ Trigger: TTGAAGTTTCCGATGACACTGACCAGGAGGACAGCAATGACTGCATGACGAGGCTTTGTGTCCGCTGTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| CDS CCA 72 bp | CTTTCTGTGACCGTGAGCTCTGTTAGGGGGATATTGTaGTACACGTCTGGAGGGTTCTTCACAGCACAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSVTVSSVRGIL*YTSGGFFTAQL Trigger: CAGCTGTGCTGTGAAGAACCCTCCAGACGTGTACCACAATATCCCCCTAACAGAGCTCACGGTCACAGAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| CDS CAA 72 bp | TCTGCACAGCGGACACAAAGCCTCGTCATGCAGTCATaGCTGTCCTCCTGGTCAGTGTCATCGGAAACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SAQRTQSLVMQS*LSSWSVSSETS Trigger: TGAAGTTTCCGATGACACTGACCAGGAGGACAGCAATGACTGCATGACGAGGCTTTGTGTCCGCTGTGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| CDS CAA 90 bp | TCCAGACACTCTGCACAGCGGACACAAAGCCTCGTCATGCAGTCATaGCTGTCCTCCTGGTCAGTGTCATCGGAAACTTCAATGGAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: SRHSAQRTQSLVMQS*LSSWSVSSETSMED Trigger: GTCTTCCATTGAAGTTTCCGATGACACTGACCAGGAGGACAGCAATGACTGCATGACGAGGCTTTGTGTCCGCTGTGCAGAGTGTCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| CDS CAA 72 bp | CTGCTGGGAGGGCGGTATGTCCAGTCTATGGTCAGCTaGTCAGTGACATCTGAAGATGACTTGAAGGTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LLGGRYVQSMVS*SVTSEDDLKVH Trigger: ATGCACCTTCAAGTCATCTTCAGATGTCACTGACAAGCTGACCATAGACTGGACATACCGCCCTCCCAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114663.4 ENSMUST00000114664.8 |
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| CDS CCA 72 bp | TGCTGTCCTCCTGGTCAGTGTCATCGGAAACTTCAATaGAAGACTTCTTATAGCCAGACCTGCTCCTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: CCPPGQCHRKLQ*KTSYSQTCSSS Trigger: AGAAGAGGAGCAGGTCTGGCTATAAGAAGTCTTCCATTGAAGTTTCCGATGACACTGACCAGGAGGACAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114664.8 |
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| CDS CAA 72 bp | TCTATGGTCAGCTTGTCAGTGACATCTGAAGATGACTaGAAGGTGCATTTCAACTTGATCTTCTCTCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: SMVSLSVTSEDD*KVHFNLIFSPT Trigger: TGTGGGAGAGAAGATCAAGTTGAAATGCACCTTCAAGTCATCTTCAGATGTCACTGACAAGCTGACCATAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114663.4 ENSMUST00000114664.8 |
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