Pregenerated sensors for MPZL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032092Ensembl transcript IDs: ENSMUST00000034600.5, ENSMUST00000215292.2, ENSMUST00000217097.2
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCTCAGGCAGAACCCAAAGCTGCCAGGCAGGGGCGTTGCTCATCTaGGCAGGTTTGTGCTGCAGAACCTGTAGGACGACAGACAGGTCA | + |
|
Preference number: 1 (lower is better) Translates to: SSGRTQSCQAGALLI*AGLCCRTCRTTDRS Trigger: TGACCTGTCTGTCGTCCTACAGGTTCTGCAGCACAAACCTGCCCAGATGAGCAACGCCCCTGCCTGGCAGCTTTGGGTTCTGCCTGAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR GCA 90 bp | ACCCAAAGCTGCCAGGCAGGGGCGTTGCTCATCTGGGCAGGTTTGTaGTGCAGAACCTGTAGGACGACAGACAGGTCATCGCTGGAAACA | + |
|
Preference number: 1 (lower is better) Translates to: TQSCQAGALLIWAGL*CRTCRTTDRSSLET Trigger: TGTTTCCAGCGATGACCTGTCTGTCGTCCTACAGGTTCTGCAGCACAAACCTGCCCAGATGAGCAACGCCCCTGCCTGGCAGCTTTGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR GCA 90 bp | AGTCTAGTAGCTCAGGCAGAACCCAAAGCTGCCAGGCAGGGGCGTTaGTCATCTGGGCAGGTTTGTGCTGCAGAACCTGTAGGACGACAG | + |
|
Preference number: 1 (lower is better) Translates to: SLVAQAEPKAARQGR*SSGQVCAAEPVGRQ Trigger: CTGTCGTCCTACAGGTTCTGCAGCACAAACCTGCCCAGATGAGCAACGCCCCTGCCTGGCAGCTTTGGGTTCTGCCTGAGCTACTAGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR GCA 90 bp | AACGAAGGTAAGTCTGAGTCTAGTAGCTCAGGCAGAACCCAAAGCTaGCAGGCAGGGGCGTTGCTCATCTGGGCAGGTTTGTGCTGCAGA | + |
|
Preference number: 1 (lower is better) Translates to: NEGKSESSSSGRTQS*QAGALLIWAGLCCR Trigger: TCTGCAGCACAAACCTGCCCAGATGAGCAACGCCCCTGCCTGGCAGCTTTGGGTTCTGCCTGAGCTACTAGACTCAGACTTACCTTCGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR TCA 90 bp | GCTCATTACAAACCTACAGTCGGGCTAGATGTGGGGGTACACCCTTaGGTGAAGCACTTGAGAGCTGAGGCAGGGGGTGTCTCTAGGTTT | + |
|
Preference number: 1 (lower is better) Translates to: AHYKPTVGLDVGVHP*VKHLRAEAGGVSRF Trigger: AAACCTAGAGACACCCCCTGCCTCAGCTCTCAAGTGCTTCACTCAAGGGTGTACCCCCACATCTAGCCCGACTGTAGGTTTGTAATGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR CCA 90 bp | AAGAAACTAAAATATGAGAAGGTATGTTCTGGCAGACAAGCTAGTTaGCTTCTTACCCCTCTGATGCACAGAAATATGGGAGTCACACAC | + |
|
Preference number: 1 (lower is better) Translates to: KKLKYEKVCSGRQAS*LLTPLMHRNMGVTH Trigger: GTGTGTGACTCCCATATTTCTGTGCATCAGAGGGGTAAGAAGCCAACTAGCTTGTCTGCCAGAACATACCTTCTCATATTTTAGTTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR CAA 90 bp | AGAACCCAAAGCTGCCAGGCAGGGGCGTTGCTCATCTGGGCAGGTTaGTGCTGCAGAACCTGTAGGACGACAGACAGGTCATCGCTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: RTQSCQAGALLIWAG*CCRTCRTTDRSSLE Trigger: TTCCAGCGATGACCTGTCTGTCGTCCTACAGGTTCTGCAGCACAAACCTGCCCAGATGAGCAACGCCCCTGCCTGGCAGCTTTGGGTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR CAA 90 bp | GAGTCTAGTAGCTCAGGCAGAACCCAAAGCTGCCAGGCAGGGGCGTaGCTCATCTGGGCAGGTTTGTGCTGCAGAACCTGTAGGACGACA | + |
|
Preference number: 2 (lower is better) Translates to: ESSSSGRTQSCQAGA*LIWAGLCCRTCRTT Trigger: TGTCGTCCTACAGGTTCTGCAGCACAAACCTGCCCAGATGAGCAACGCCCCTGCCTGGCAGCTTTGGGTTCTGCCTGAGCTACTAGACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR-3UTR GCA 90 bp | CAGGGTATGGTGGAACATGCCCTTATTCCTAGCACTAGGGAGGCAGAGGCAGTACATGCATTCAGTGCCTaGAGACACCAGAAGAGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: QGMVEHALIPSTREAEAVHAFSA*RHQKRV Trigger: CACTCTCTTCTGGTGTCTGCAGGCACTGAATGCATG...TACTGCCTCTGCCTCCCTAGTGCTAGGAATAAGGGCATGTTCCACCATACCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR-3UTR TCA 90 bp | GATGGTTGTGAGCCACCAAATGGATGCTGGGAACTGAACTGGGATCTTCTGCAAATCTCTTCAGACCCCTaGGCACACCTGTGTGCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: DGCEPPNGCWELNWDLLQISSDP*AHLCAV Trigger: AACAGCACACAGGTGTGCTCAGGGGTCTGAAGAGAT...TTGCAGAAGATCCCAGTTCAGTTCCCAGCATCCATTTGGTGGCTCACAACCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR-3UTR GCA 90 bp | AGTTATCGTGTATCACGAAGTCTTCTAATAAATTGCTTAAGGGCTCCAGTCTGCGGCAGAACCCAAAGCTaGCAGGCAGGGGCGTTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: SYRVSRSLLINCLRAPVCGRTQS*QAGALL Trigger: GAGCAACGCCCCTGCCTGGCAGCTTTGGGTTCTGCC...GCAGACTGGAGCCCTTAAGCAATTTATTAGAAGACTTCGTGATACACGATAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR-3UTR CCA 90 bp | CAGGGTATGGTGGAACATGCCCTTATTCCTAGCACTAGGGAGGCAGAGGCAGTACAAAAGTGGCTGGAATaGTTAGCTCATCTTTTTATG | + |
|
Preference number: 2 (lower is better) Translates to: QGMVEHALIPSTREAEAVQKWLE*LAHLFM Trigger: CATAAAAAGATGAGCTAACCATTCCAGCCACTTTTG...TACTGCCTCTGCCTCCCTAGTGCTAGGAATAAGGGCATGTTCCACCATACCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR-3UTR TCA 90 bp | AGTTATCGTGTATCACGAAGTCTTCTAATAAATTGCTTAAGGGCTCCAGTCTGCCTGCAAGAGGATAGATaGGCTATCTCTTCAGACCCC | + |
|
Preference number: 2 (lower is better) Translates to: SYRVSRSLLINCLRAPVCLQEDR*AISSDP Trigger: GGGGTCTGAAGAGATAGCTCATCTATCCTCTTGCAG...GCAGACTGGAGCCCTTAAGCAATTTATTAGAAGACTTCGTGATACACGATAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR-3UTR TCA 90 bp | AAGTTACAGTACAAAAGTACTCTTAGGAAGGAGACACTGAACAAGAACCTGATAGGCTTCTTACCCCTCTaGTGCACAGAAATATGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: KLQYKSTLRKETLNKNLIGFLPL*CTEIWE Trigger: CTCCCATATTTCTGTGCATCAGAGGGGTAAGAAGCC...TATCAGGTTCTTGTTCAGTGTCTCCTTCCTAAGAGTACTTTTGTACTGTAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR-3UTR GCA 90 bp | CAAACAATGCTAGTGTGCACAGACCATGTAACCAGACACAAAGAAGAAAGCCATCTGAGCACACCTGTGTaGTGTTCTAAAGAAACTAAA | + |
|
Preference number: 2 (lower is better) Translates to: QTMLVCTDHVTRHKEESHLSTPV*CSKETK Trigger: TTTAGTTTCTTTAGAACAGCACACAGGTGTGCTCAG...ATGGCTTTCTTCTTTGTGTCTGGTTACATGGTCTGTGCACACTAGCATTGTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR-3UTR CCA 90 bp | CAAACAATGCTAGTGTGCACAGACCATGTAACCAGACACAAAGAAGAAAGCCATGGTATTAATCAAAAGTaGCTGGAATGGTTAGCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: QTMLVCTDHVTRHKEESHGINQK*LEWLAH Trigger: ATGAGCTAACCATTCCAGCCACTTTTGATTAATACC...ATGGCTTTCTTCTTTGTGTCTGGTTACATGGTCTGTGCACACTAGCATTGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR-3UTR GCA 90 bp | AAGTTACAGTACAAAAGTACTCTTAGGAAGGAGACACTGAACAAGAACCTGATAAGTCTTCTAATAAATTaGTTAAGGGCTCCAGTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: KLQYKSTLRKETLNKNLISLLIN*LRAPVC Trigger: GCAGACTGGAGCCCTTAAGCAATTTATTAGAAGACT...TATCAGGTTCTTGTTCAGTGTCTCCTTCCTAAGAGTACTTTTGTACTGTAACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR-3UTR CCA 90 bp | AAGTTACAGTACAAAAGTACTCTTAGGAAGGAGACACTGAACAAGAACCTGATACACACCATAGGAATGTaGAAGGACAAATATGTAACC | + |
|
Preference number: 2 (lower is better) Translates to: KLQYKSTLRKETLNKNLIHTIGM*KDKYVT Trigger: GGTTACATATTTGTCCTTCCACATTCCTATGGTGTG...TATCAGGTTCTTGTTCAGTGTCTCCTTCCTAAGAGTACTTTTGTACTGTAACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR-3UTR CCA 90 bp | AAGTTACAGTACAAAAGTACTCTTAGGAAGGAGACACTGAACAAGAACCTGATATCATTTGCTTTGAGTTaGCCTTCTTCACAAGTCTAT | + |
|
Preference number: 2 (lower is better) Translates to: KLQYKSTLRKETLNKNLISFALS*PSSQVY Trigger: ATAGACTTGTGAAGAAGGCCAACTCAAAGCAAATGA...TATCAGGTTCTTGTTCAGTGTCTCCTTCCTAAGAGTACTTTTGTACTGTAACTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR CAA 90 bp | TATTTTCTTTTAAAGTTATCGTGTATCACGAAGTCTTCTAATAAATaGCTTAAGGGCTCCAGTCTGCAAATGAAGAGAATGTTGAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: YFLLKLSCITKSSNK*LKGSSLQMKRMLSW Trigger: CCAGCTCAACATTCTCTTCATTTGCAGACTGGAGCCCTTAAGCAATTTATTAGAAGACTTCGTGATACACGATAACTTTAAAAGAAAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR-3UTR GCA 90 bp | AAGTTACAGTACAAAAGTACTCTTAGGAAGGAGACACTGAACAAGAACCTGATACTTTTGTCATTATTGTaGTTAGATTTGCGCTGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: KLQYKSTLRKETLNKNLILLSLL*LDLRCH Trigger: ATGACAGCGCAAATCTAAGCACAATAATGACAAAAG...TATCAGGTTCTTGTTCAGTGTCTCCTTCCTAAGAGTACTTTTGTACTGTAACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR GCA 72 bp | TGCCAGGCAGGGGCGTTGCTCATCTGGGCAGGTTTGTaGTGCAGAACCTGTAGGACGACAGACAGGTCATCG | + |
|
Preference number: 3 (lower is better) Translates to: CQAGALLIWAGL*CRTCRTTDRSS Trigger: CGATGACCTGTCTGTCGTCCTACAGGTTCTGCAGCACAAACCTGCCCAGATGAGCAACGCCCCTGCCTGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR GCA 72 bp | GCTCAGGCAGAACCCAAAGCTGCCAGGCAGGGGCGTTaGTCATCTGGGCAGGTTTGTGCTGCAGAACCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: AQAEPKAARQGR*SSGQVCAAEPV Trigger: TACAGGTTCTGCAGCACAAACCTGCCCAGATGAGCAACGCCCCTGCCTGGCAGCTTTGGGTTCTGCCTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR CCA 72 bp | AGAACCCAAAGCTGCCAGGCAGGGGCGTTGCTCATCTaGGCAGGTTTGTGCTGCAGAACCTGTAGGACGACA | + |
|
Preference number: 3 (lower is better) Translates to: RTQSCQAGALLI*AGLCCRTCRTT Trigger: TGTCGTCCTACAGGTTCTGCAGCACAAACCTGCCCAGATGAGCAACGCCCCTGCCTGGCAGCTTTGGGTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR TCA 72 bp | AAACCTACAGTCGGGCTAGATGTGGGGGTACACCCTTaGGTGAAGCACTTGAGAGCTGAGGCAGGGGGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: KPTVGLDVGVHP*VKHLRAEAGGV Trigger: GACACCCCCTGCCTCAGCTCTCAAGTGCTTCACTCAAGGGTGTACCCCCACATCTAGCCCGACTGTAGGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR GCA 72 bp | GGTATCTGCCTGCATGTATCACATGCATTCAGTGCCTaGAGACACCAGAAGAGAGTGTCACCTCCCCTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: GICLHVSHAFSA*RHQKRVSPPLK Trigger: TTTTAGGGGAGGTGACACTCTCTTCTGGTGTCTGCAGGCACTGAATGCATGTGATACATGCAGGCAGATACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR TCA 72 bp | GGACGACAGACAGGTCATCGCTGGAAACATTTCTATTaGTTTCAAGGGGTGCTGATGGTGTCCTCAAAAATC | + |
|
Preference number: 3 (lower is better) Translates to: GRQTGHRWKHFY*FQGVLMVSSKI Trigger: GATTTTTGAGGACACCATCAGCACCCCTTGAAATCAATAGAAATGTTTCCAGCGATGACCTGTCTGTCGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR TCA 72 bp | ATCGCTGGAAACATTTCTATTGATTTCAAGGGGTGCTaGTGGTGTCCTCAAAAATCCTCAGCTTCTCGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: IAGNISIDFKGC*WCPQKSSASRS Trigger: ACTTCGAGAAGCTGAGGATTTTTGAGGACACCATCAGCACCCCTTGAAATCAATAGAAATGTTTCCAGCGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR TCA 72 bp | ACTAAACCATCACATCGCAAAGATTCACCCTGGACCTaGACTTTTAGATGGTCTCTGTTCTCCAAACAATGC | + |
|
Preference number: 3 (lower is better) Translates to: TKPSHRKDSPWT*TFRWSLFSKQC Trigger: GCATTGTTTGGAGAACAGAGACCATCTAAAAGTTCAGGTCCAGGGTGAATCTTTGCGATGTGATGGTTTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR CCA 72 bp | TGCACAGAAATATGGGAGTCACACACCATAGGAATGTaGAAGGACAAATATGTAACCTCTTGGTTTGCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: CTEIWESHTIGM*KDKYVTSWFAK Trigger: TTTTGCAAACCAAGAGGTTACATATTTGTCCTTCCACATTCCTATGGTGTGTGACTCCCATATTTCTGTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR-3UTR CAA 90 bp | AAGTTACAGTACAAAAGTACTCTTAGGAAGGAGACACTGAACAAGAACCTGATAGTCATTTGCTTTGAGTaGGCCTTCTTCACAAGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: KLQYKSTLRKETLNKNLIVICFE*AFFTSL Trigger: TAGACTTGTGAAGAAGGCCAACTCAAAGCAAATGAC...TATCAGGTTCTTGTTCAGTGTCTCCTTCCTAAGAGTACTTTTGTACTGTAACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR CAA 72 bp | AGCTGCCAGGCAGGGGCGTTGCTCATCTGGGCAGGTTaGTGCTGCAGAACCTGTAGGACGACAGACAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SCQAGALLIWAG*CCRTCRTTDRS Trigger: TGACCTGTCTGTCGTCCTACAGGTTCTGCAGCACAAACCTGCCCAGATGAGCAACGCCCCTGCCTGGCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR CAA 72 bp | AGCTCAGGCAGAACCCAAAGCTGCCAGGCAGGGGCGTaGCTCATCTGGGCAGGTTTGTGCTGCAGAACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSGRTQSCQAGA*LIWAGLCCRTC Trigger: ACAGGTTCTGCAGCACAAACCTGCCCAGATGAGCAACGCCCCTGCCTGGCAGCTTTGGGTTCTGCCTGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| CDS-3UTR TCA 90 bp | GATGGTTGTGAGCCACCAAATGGATGCTGGGAACTGAACTGGGATCTTCTGCAAGAACATCTGTCCCGTTaGCTGCCTCCAGGGCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: DGCEPPNGCWELNWDLLQEHLSR*LPPGPR Trigger: CCGGGGCCCTGGAGGCAGTCAACGGGACAGATGTTC...TTGCAGAAGATCCCAGTTCAGTTCCCAGCATCCATTTGGTGGCTCACAACCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| CDS-3UTR GCA 90 bp | GATGGTTGTGAGCCACCAAATGGATGCTGGGAACTGAACTGGGATCTTCTGCAATACGATGATCATCAGTaGGCACGCAGAGCCAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: DGCEPPNGCWELNWDLLQYDDHQ*ARRANG Trigger: GCCATTGGCTCTGCGTGCGCACTGATGATCATCGTA...TTGCAGAAGATCCCAGTTCAGTTCCCAGCATCCATTTGGTGGCTCACAACCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| CDS-3UTR GCA 90 bp | GATGGTTGTGAGCCACCAAATGGATGCTGGGAACTGAACTGGGATCTTCTGCAACGCTTTTTCCGGAAGTaGTGGAAGAGGACTACCACG | + |
|
Preference number: 4 (lower is better) Translates to: DGCEPPNGCWELNWDLLQRFFRK*WKRTTT Trigger: CGTGGTAGTCCTCTTCCAGCACTTCCGGAAAAAGCG...TTGCAGAAGATCCCAGTTCAGTTCCCAGCATCCATTTGGTGGCTCACAACCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| CDS-3UTR CCA 90 bp | TCATCGCTGGAAACATTTCTATTGATTTCAAGGGGTGCTGATGGTGTCCTCAAACGCACGCAGAGCCAATaGCCACGGCCAGGAAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSLETFLLISRGADGVLKRTQSQ*PRPGSR Trigger: TCTACTTCCTGGCCGTGGCCATTGGCTCTGCGTGCG...TTTGAGGACACCATCAGCACCCCTTGAAATCAATAGAAATGTTTCCAGCGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| CDS-3UTR CCA 90 bp | CAGGGTATGGTGGAACATGCCCTTATTCCTAGCACTAGGGAGGCAGAGGCAGTAGAGACCTTGTTTCCTTaGTTGAGTTTTTCCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QGMVEHALIPSTREAEAVETLFP*LSFSSS Trigger: AGAAGAGGAAAAACTCAACCAAGGAAACAAGGTCTC...TACTGCCTCTGCCTCCCTAGTGCTAGGAATAAGGGCATGTTCCACCATACCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| CDS-3UTR TCA 90 bp | GATGGTTGTGAGCCACCAAATGGATGCTGGGAACTGAACTGGGATCTTCTGCAACCTTGTTTCCTTGGTTaGGTTTTTCCTCTTCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: DGCEPPNGCWELNWDLLQPCFLG*VFPLLL Trigger: CAAAAGAAGAGGAAAAACTCAACCAAGGAAACAAGG...TTGCAGAAGATCCCAGTTCAGTTCCCAGCATCCATTTGGTGGCTCACAACCATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| CDS-3UTR GCA 90 bp | GATGGTTGTGAGCCACCAAATGGATGCTGGGAACTGAACTGGGATCTTCTGCAACAAAGCTGGAGAAAGTaGATTTTAACCGAACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: DGCEPPNGCWELNWDLLQQSWRK*ILTEHL Trigger: CAGATGTTCGGTTAAAATGCACTTTCTCCAGCTTTG...TTGCAGAAGATCCCAGTTCAGTTCCCAGCATCCATTTGGTGGCTCACAACCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| CDS-3UTR CCA 90 bp | AGAAATATGGGAGTCACACACCATAGGAATGTGGAAGGACAAATATGTAACCTCGGTGGATTCTTCACCTaGCAGGTGTATGTCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: RNMGVTHHRNVEGQICNLGGFFT*QVYVPL Trigger: CAATGGGACATACACCTGCCAGGTGAAGAATCCACC...GAGGTTACATATTTGTCCTTCCACATTCCTATGGTGTGTGACTCCCATATTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR CAA 72 bp | AGGACGACAGACAGGTCATCGCTGGAAACATTTCTATaGATTTCAAGGGGTGCTGATGGTGTCCTCAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RTTDRSSLETFL*ISRGADGVLKN Trigger: ATTTTTGAGGACACCATCAGCACCCCTTGAAATCAATAGAAATGTTTCCAGCGATGACCTGTCTGTCGTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| CDS-3UTR CCA 90 bp | AGTTATCGTGTATCACGAAGTCTTCTAATAAATTGCTTAAGGGCTCCAGTCTGCCCACAGGGGCAAAGCTaGAGAAAGTGCATTTTAACC | + |
|
Preference number: 4 (lower is better) Translates to: SYRVSRSLLINCLRAPVCPQGQS*RKCILT Trigger: GGTTAAAATGCACTTTCTCCAGCTTTGCCCCTGTGG...GCAGACTGGAGCCCTTAAGCAATTTATTAGAAGACTTCGTGATACACGATAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| CDS-3UTR CCA 90 bp | AGAAATATGGGAGTCACACACCATAGGAATGTGGAAGGACAAATATGTAACCTCACCATCAACATCAGGTaGATTCTTCACCTGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RNMGVTHHRNVEGQICNLTINIR*ILHLAG Trigger: ACCTGCCAGGTGAAGAATCCACCTGATGTTGATGGT...GAGGTTACATATTTGTCCTTCCACATTCCTATGGTGTGTGACTCCCATATTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| CDS-3UTR GCA 90 bp | AAGTTACAGTACAAAAGTACTCTTAGGAAGGAGACACTGAACAAGAACCTGATACCATTGTCGTCAAACTaGAGCTTCCAGAGCAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: KLQYKSTLRKETLNKNLIPLSSN*SFQSKM Trigger: CATCTTGCTCTGGAAGCTGCAGTTTGACGACAATGG...TATCAGGTTCTTGTTCAGTGTCTCCTTCCTAAGAGTACTTTTGTACTGTAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| 3UTR CAA 72 bp | TTAAAGTTATCGTGTATCACGAAGTCTTCTAATAAATaGCTTAAGGGCTCCAGTCTGCAAATGAAGAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: LKLSCITKSSNK*LKGSSLQMKRM Trigger: CATTCTCTTCATTTGCAGACTGGAGCCCTTAAGCAATTTATTAGAAGACTTCGTGATACACGATAACTTTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| CDS CCA 90 bp | AGCACAAGCGCGGGGCTCTTGCCATACATCAGGGAAAGCCAGTCGTaGCCCCAGAGGCCAAACCCGGCAGACCCAGGACTCCAGCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: STSAGLLPYIRESQS*PQRPNPADPGLQHP Trigger: TGGGTGCTGGAGTCCTGGGTCTGCCGGGTTTGGCCTCTGGGGCCACGACTGGCTTTCCCTGATGTATGGCAAGAGCCCCGCGCTTGTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215292.2 |
||
| CDS TCA 90 bp | GCTTTTTCCGGAAGTGCTGGAAGAGGACTACCACGATCACTACGATaGTCATCAGTGCGCACGCAGAGCCAATGGCCACGGCCAGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: AFSGSAGRGLPRSLR*SSVRTQSQWPRPGS Trigger: ACTTCCTGGCCGTGGCCATTGGCTCTGCGTGCGCACTGATGATCATCGTAGTGATCGTGGTAGTCCTCTTCCAGCACTTCCGGAAAAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034600.5 ENSMUST00000217097.2 |
||
| CDS CCA 90 bp | AGGTGTATGTCCCATTGTCGTCAAACTGCAGCTTCCAGAGCAAGATaGAGACGTCATATCGCTCGGGGTTTCCGTCCCAGACCACCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: RCMSHCRQTAASRAR*RRHIARGFRPRPPG Trigger: ACCGGGTGGTCTGGGACGGAAACCCCGAGCGATATGACGTCTCCATCTTGCTCTGGAAGCTGCAGTTTGACGACAATGGGACATACACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034600.5 ENSMUST00000215292.2 ENSMUST00000217097.2 |
||
| CDS GCA 90 bp | GAAGTGCTGGAAGAGGACTACCACGATCACTACGATGATCATCAGTaGGCACGCAGAGCCAATGGCCACGGCCAGGAAGTAGATCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: EVLEEDYHDHYDDHQ*ARRANGHGQEVDLR Trigger: TCTGAGATCTACTTCCTGGCCGTGGCCATTGGCTCTGCGTGCGCACTGATGATCATCGTAGTGATCGTGGTAGTCCTCTTCCAGCACTTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034600.5 ENSMUST00000217097.2 |
||
| CDS GCA 90 bp | CCCTCGGCTTTATCAGCACTGTCCGCCCATCGCTTTTTCCGGAAGTaGTGGAAGAGGACTACCACGATCACTACGATGATCATCAGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: PSALSALSAHRFFRK*WKRTTTITTMIISA Trigger: CGCACTGATGATCATCGTAGTGATCGTGGTAGTCCTCTTCCAGCACTTCCGGAAAAAGCGATGGGCGGACAGTGCTGATAAAGCCGAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034600.5 ENSMUST00000217097.2 |
||
| CDS TCA 90 bp | GGGCAAAGCTGGAGAAAGTGCATTTTAACCGAACATCTGTCCCGTTaGCTGCCTCCAGGGCCCCGGAGGTGTAAATTTCCACAGCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GQSWRKCILTEHLSR*LPPGPRRCKFPQLL Trigger: CAGAAGCTGTGGAAATTTACACCTCCGGGGCCCTGGAGGCAGTCAACGGGACAGATGTTCGGTTAAAATGCACTTTCTCCAGCTTTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034600.5 ENSMUST00000215292.2 |
||
| CDS CCA 90 bp | TCGGCTTTATCAGCACTGTCCGCCCATCGCTTTTTCCGGAAGTGCTaGAAGAGGACTACCACGATCACTACGATGATCATCAGTGCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SALSALSAHRFFRKC*KRTTTITTMIISAH Trigger: GTGCGCACTGATGATCATCGTAGTGATCGTGGTAGTCCTCTTCCAGCACTTCCGGAAAAAGCGATGGGCGGACAGTGCTGATAAAGCCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034600.5 ENSMUST00000217097.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGTATGGTGGAACATGCCCTTATTCCTAGCACTAGGGAGGCAGAGGCAGTACAGGTGTATGTCCCATaGTCGTCAAACTGCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QGMVEHALIPSTREAEAVQVYVP*SSNCSF Trigger: GAAGCTGCAGTTTGACGACAATGGGACATACACCTG...TACTGCCTCTGCCTCCCTAGTGCTAGGAATAAGGGCATGTTCCACCATACCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| CDS-3UTR CAA 90 bp | AGAAATATGGGAGTCACACACCATAGGAATGTGGAAGGACAAATATGTAACCTCCGAACATCTGTCCCGTaGACTGCCTCCAGGGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: RNMGVTHHRNVEGQICNLRTSVP*TASRAP Trigger: CGGGGCCCTGGAGGCAGTCAACGGGACAGATGTTCG...GAGGTTACATATTTGTCCTTCCACATTCCTATGGTGTGTGACTCCCATATTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| CDS-3UTR CAA 90 bp | AGTTATCGTGTATCACGAAGTCTTCTAATAAATTGCTTAAGGGCTCCAGTCTGCCAGACCACCCGGTCTTaGAACCGTCCGCTCATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SYRVSRSLLINCLRAPVCQTTRS*NRPLMG Trigger: GCCCATGAGCGGACGGTTCAAAGACCGGGTGGTCTG...GCAGACTGGAGCCCTTAAGCAATTTATTAGAAGACTTCGTGATACACGATAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| CDS-3UTR CAA 90 bp | CAGGGTATGGTGGAACATGCCCTTATTCCTAGCACTAGGGAGGCAGAGGCAGTAACCTTGTTTCCTTGGTaGAGTTTTTCCTCTTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: QGMVEHALIPSTREAEAVTLFPW*SFSSSF Trigger: AAAAGAAGAGGAAAAACTCAACCAAGGAAACAAGGT...TACTGCCTCTGCCTCCCTAGTGCTAGGAATAAGGGCATGTTCCACCATACCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| CDS-3UTR CAA 90 bp | AGAAATATGGGAGTCACACACCATAGGAATGTGGAAGGACAAATATGTAACCTCCCTCTTCTTTTGATTTaGTCCCCTCGGCTTTATCAG | + |
|
Preference number: 5 (lower is better) Translates to: RNMGVTHHRNVEGQICNLPLLLI*SPRLYQ Trigger: CTGATAAAGCCGAGGGGACAAAATCAAAAGAAGAGG...GAGGTTACATATTTGTCCTTCCACATTCCTATGGTGTGTGACTCCCATATTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| CDS-3UTR CAA 90 bp | AGTTATCGTGTATCACGAAGTCTTCTAATAAATTGCTTAAGGGCTCCAGTCTGCAGAGACCTTGTTTCCTaGGTTGAGTTTTTCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SYRVSRSLLINCLRAPVCRDLVS*VEFFLF Trigger: GAAGAGGAAAAACTCAACCAAGGAAACAAGGTCTCT...GCAGACTGGAGCCCTTAAGCAATTTATTAGAAGACTTCGTGATACACGATAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| CDS-3UTR CAA 90 bp | TCATCGCTGGAAACATTTCTATTGATTTCAAGGGGTGCTGATGGTGTCCTCAAAACAAAAACAGAGACCTaGTTTCCTTGGTTGAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSLETFLLISRGADGVLKTKTET*FPWLSF Trigger: AAAACTCAACCAAGGAAACAAGGTCTCTGTTTTTGT...TTTGAGGACACCATCAGCACCCCTTGAAATCAATAGAAATGTTTCCAGCGATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034600.5 |
||
| CDS CCA 72 bp | GCGGGGCTCTTGCCATACATCAGGGAAAGCCAGTCGTaGCCCCAGAGGCCAAACCCGGCAGACCCAGGACTC | + |
|
Preference number: 6 (lower is better) Translates to: AGLLPYIRESQS*PQRPNPADPGL Trigger: GAGTCCTGGGTCTGCCGGGTTTGGCCTCTGGGGCCACGACTGGCTTTCCCTGATGTATGGCAAGAGCCCCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215292.2 |
||
| CDS CAA 90 bp | GTGAGCTGTAAACTCAGGAGAAGTGGAAGCACAAGCGCGGGGCTCTaGCCATACATCAGGGAAAGCCAGTCGTGGCCCCAGAGGCCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: VSCKLRRSGSTSAGL*PYIRESQSWPQRPN Trigger: GTTTGGCCTCTGGGGCCACGACTGGCTTTCCCTGATGTATGGCAAGAGCCCCGCGCTTGTGCTTCCACTTCTCCTGAGTTTACAGCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215292.2 |
||
| CDS GCA 72 bp | AACTCAGGAGAAGTGGAAGCACAAGCGCGGGGCTCTTaGCATACATCAGGGAAAGCCAGTCGTGGCCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: NSGEVEAQARGS*HTSGKASRGPR Trigger: TCTGGGGCCACGACTGGCTTTCCCTGATGTATGGCAAGAGCCCCGCGCTTGTGCTTCCACTTCTCCTGAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215292.2 |
||
| CDS TCA 72 bp | GGAAGTGCTGGAAGAGGACTACCACGATCACTACGATaGTCATCAGTGCGCACGCAGAGCCAATGGCCACGG | + |
|
Preference number: 6 (lower is better) Translates to: GSAGRGLPRSLR*SSVRTQSQWPR Trigger: CCGTGGCCATTGGCTCTGCGTGCGCACTGATGATCATCGTAGTGATCGTGGTAGTCCTCTTCCAGCACTTCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034600.5 ENSMUST00000217097.2 |
||
| CDS GCA 72 bp | GAAGAGGACTACCACGATCACTACGATGATCATCAGTaGGCACGCAGAGCCAATGGCCACGGCCAGGAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: EEDYHDHYDDHQ*ARRANGHGQEV Trigger: TACTTCCTGGCCGTGGCCATTGGCTCTGCGTGCGCACTGATGATCATCGTAGTGATCGTGGTAGTCCTCTTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034600.5 ENSMUST00000217097.2 |
||
| CDS TCA 72 bp | AGTAGATCTCAGAGAAGGGCACAGTGTGCACAACGCTaGGCCGGATCGTCCCAACCAGACCATCAACATCAG | + |
|
Preference number: 6 (lower is better) Translates to: SRSQRRAQCAQR*AGSSQPDHQHQ Trigger: CTGATGTTGATGGTCTGGTTGGGACGATCCGGCTCAGCGTTGTGCACACTGTGCCCTTCTCTGAGATCTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034600.5 ENSMUST00000217097.2 |
||
| CDS CCA 72 bp | TCCCATTGTCGTCAAACTGCAGCTTCCAGAGCAAGATaGAGACGTCATATCGCTCGGGGTTTCCGTCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SHCRQTAASRAR*RRHIARGFRPR Trigger: TCTGGGACGGAAACCCCGAGCGATATGACGTCTCCATCTTGCTCTGGAAGCTGCAGTTTGACGACAATGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034600.5 ENSMUST00000215292.2 ENSMUST00000217097.2 |
||
| CDS CCA 72 bp | TCAGCACTGTCCGCCCATCGCTTTTTCCGGAAGTGCTaGAAGAGGACTACCACGATCACTACGATGATCATC | + |
|
Preference number: 6 (lower is better) Translates to: SALSAHRFFRKC*KRTTTITTMII Trigger: GATGATCATCGTAGTGATCGTGGTAGTCCTCTTCCAGCACTTCCGGAAAAAGCGATGGGCGGACAGTGCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034600.5 ENSMUST00000217097.2 |
||
| CDS TCA 72 bp | TGGAGAAAGTGCATTTTAACCGAACATCTGTCCCGTTaGCTGCCTCCAGGGCCCCGGAGGTGTAAATTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: WRKCILTEHLSR*LPPGPRRCKFP Trigger: TGGAAATTTACACCTCCGGGGCCCTGGAGGCAGTCAACGGGACAGATGTTCGGTTAAAATGCACTTTCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034600.5 ENSMUST00000215292.2 |
||
| CDS GCA 72 bp | TTATCAGCACTGTCCGCCCATCGCTTTTTCCGGAAGTaGTGGAAGAGGACTACCACGATCACTACGATGATC | + |
|
Preference number: 6 (lower is better) Translates to: LSALSAHRFFRK*WKRTTTITTMI Trigger: GATCATCGTAGTGATCGTGGTAGTCCTCTTCCAGCACTTCCGGAAAAAGCGATGGGCGGACAGTGCTGATAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034600.5 ENSMUST00000217097.2 |
||
| CDS CCA 72 bp | ACGTCACAGTTAGCGCATCTCCCACAGGGGCAAAGCTaGAGAAAGTGCATTTTAACCGAACATCTGTCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: TSQLAHLPQGQS*RKCILTEHLSR Trigger: ACGGGACAGATGTTCGGTTAAAATGCACTTTCTCCAGCTTTGCCCCTGTGGGAGATGCGCTAACTGTGACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034600.5 ENSMUST00000215292.2 |
||