Pregenerated sensors for MPZL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026566Ensembl transcript IDs: ENSMUST00000068705.13, ENSMUST00000111435.9, ENSMUST00000191818.6, ENSMUST00000193910.6, ENSMUST00000193948.2, ENSMUST00000194437.6, ENSMUST00000195410.6
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGAGGTGGTGTGTGGAGTTAGGCCATGAGGCCTGCACACTGTCCTaGGAGCAGCTGGAACCAGGCTGCAGGCTCAGTCCAGGAAGGCCG | + |
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Preference number: 1 (lower is better) Translates to: GRWCVELGHEACTLS*EQLEPGCRLSPGRP Trigger: CGGCCTTCCTGGACTGAGCCTGCAGCCTGGTTCCAGCTGCTCGCAGGACAGTGTGCAGGCCTCATGGCCTAACTCCACACACCACCTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| 3UTR GCA 90 bp | GCTGCAGGCTCAGTCCAGGAAGGCCGGCCAGCAGCCAACGGTTTCTaGCTAGGGAAGAAGGTTGGCTTGGCCAACAGAGGATTTGGTTCT | + |
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Preference number: 1 (lower is better) Translates to: AAGSVQEGRPAANGF*LGKKVGLANRGFGS Trigger: AGAACCAAATCCTCTGTTGGCCAAGCCAACCTTCTTCCCTAGGCAGAAACCGTTGGCTGCTGGCCGGCCTTCCTGGACTGAGCCTGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| 3UTR GCA 90 bp | GACGTGGCCTCACTGTTATCTGTAGCCAGGCCCAGAACGCAGAGTTaGAGGAAAGAGACCGAATACTCCAAGGGAGGTGGTGTGTGGAGT | + |
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Preference number: 1 (lower is better) Translates to: DVASLLSVARPRTQS*RKETEYSKGGGVWS Trigger: ACTCCACACACCACCTCCCTTGGAGTATTCGGTCTCTTTCCTGCAACTCTGCGTTCTGGGCCTGGCTACAGATAACAGTGAGGCCACGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| 3UTR GCA 90 bp | ATTCGAATGCATTCTTCTGCTCAGAAGACACAGGAAGCACAGGTCTaGCATCTGGACGTGGCCTCACTGTTATCTGTAGCCAGGCCCAGA | + |
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Preference number: 1 (lower is better) Translates to: IRMHSSAQKTQEAQV*HLDVASLLSVARPR Trigger: TCTGGGCCTGGCTACAGATAACAGTGAGGCCACGTCCAGATGGCAGACCTGTGCTTCCTGTGTCTTCTGAGCAGAAGAATGCATTCGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| 3UTR GCA 90 bp | TGTACCCTTTTAACCACGACCACAGCCTCAGCCAGCTCTGCTGTCTaGACGCTGACAAGAACTCATTGTGAGATCGTAGCTAATAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: CTLLTTTTASASSAV*TLTRTHCEIVANSR Trigger: CCTGCTATTAGCTACGATCTCACAATGAGTTCTTGTCAGCGTGCAGACAGCAGAGCTGGCTGAGGCTGTGGTCGTGGTTAAAAGGGTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| 3UTR GCA 90 bp | AAGAGGAGGAGAAAGGAAGATGCTGCCTTCCACACGCTATTGTCATaGTGGGGCTCTGTAATCTGTACCCTTTTAACCACGACCACAGCC | + |
|
Preference number: 1 (lower is better) Translates to: KRRRKEDAAFHTLLS*WGSVICTLLTTTTA Trigger: GGCTGTGGTCGTGGTTAAAAGGGTACAGATTACAGAGCCCCAGCATGACAATAGCGTGTGGAAGGCAGCATCTTCCTTTCTCCTCCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| 3UTR CCA 90 bp | AGGAGGAGAAAGGAAGATGCTGCCTTCCACACGCTATTGTCATGCTaGGGCTCTGTAATCTGTACCCTTTTAACCACGACCACAGCCTCA | + |
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Preference number: 1 (lower is better) Translates to: RRRKEDAAFHTLLSC*GSVICTLLTTTTAS Trigger: TGAGGCTGTGGTCGTGGTTAAAAGGGTACAGATTACAGAGCCCCAGCATGACAATAGCGTGTGGAAGGCAGCATCTTCCTTTCTCCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| 3UTR CCA 90 bp | ACAAGATGGTTCCTTACAAAGCAAGAAAGGATGGTTACTGTACTGTaGAGCAGCAAGAAAGGATGGTTACTGTACTGTGGAGCAGCACGG | + |
|
Preference number: 1 (lower is better) Translates to: TRWFLTKQERMVTVL*SSKKGWLLYCGAAR Trigger: CCGTGCTGCTCCACAGTACAGTAACCATCCTTTCTTGCTGCTCCACAGTACAGTAACCATCCTTTCTTGCTTTGTAAGGAACCATCTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193910.6 |
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| 3UTR CAA 90 bp | GGCCGGCCAGCAGCCAACGGTTTCTGCCTAGGGAAGAAGGTTGGCTaGGCCAACAGAGGATTTGGTTCTGACTGGGCAGGGAGATCATGG | + |
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Preference number: 2 (lower is better) Translates to: GRPAANGFCLGKKVG*ANRGFGSDWAGRSW Trigger: CCATGATCTCCCTGCCCAGTCAGAACCAAATCCTCTGTTGGCCAAGCCAACCTTCTTCCCTAGGCAGAAACCGTTGGCTGCTGGCCGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| 3UTR-3UTR TCA 90 bp | GTCTGCCATCTGGACGTGGCCTCACTGTTATCTGTAGCCAGGCCCAGAACGCAGCAGAGGATTTGGTTCTaGCTGGGCAGGGAGATCATG | + |
|
Preference number: 2 (lower is better) Translates to: VCHLDVASLLSVARPRTQQRIWF*LGREIM Trigger: CATGATCTCCCTGCCCAGTCAGAACCAAATCCTCTG...CTGCGTTCTGGGCCTGGCTACAGATAACAGTGAGGCCACGTCCAGATGGCAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| 3UTR-3UTR TCA 90 bp | GAAAGGATGGTTACTGTACTGTGGAGCAGCACGGCGCCTGAATGGAAAGAGGAGGCCCTGGGGCTTTTGTaGGTTTGGGCCTTGTGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: ERMVTVLWSSTAPEWKEEALGLL*VWALCD Trigger: GTCACACAAGGCCCAAACTCACAAAAGCCCCAGGGC...CTCCTCTTTCCATTCAGGCGCCGTGCTGCTCCACAGTACAGTAACCATCCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193910.6 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGTGGTGTGTGGAGTTAGGCCATGAGGCCTGCACACTGTCCTGCGAGCAGCACAAGCGTCCAGTTTaGAAATGTTTGGGTGTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: GRWCVELGHEACTLSCEQHKRPV*KCLGVL Trigger: GAGAACACCCAAACATTTCCAAACTGGACGCTTGTG...CTGCTCGCAGGACAGTGTGCAGGCCTCATGGCCTAACTCCACACACCACCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| 3UTR-3UTR GCA 90 bp | CAGAAGACACAGGAAGCACAGGTCTGCCATCTGGACGTGGCCTCACTGTTATCTCCCAGAACGCAGAGTTaGAGGAAAGAGACCGAATAC | + |
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Preference number: 2 (lower is better) Translates to: QKTQEAQVCHLDVASLLSPRTQS*RKETEY Trigger: GTATTCGGTCTCTTTCCTGCAACTCTGCGTTCTGGG...AGATAACAGTGAGGCCACGTCCAGATGGCAGACCTGTGCTTCCTGTGTCTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| 3UTR CAA 90 bp | GTCCCTAAGAGGAGGAGAAAGGAAGATGCTGCCTTCCACACGCTATaGTCATGCTGGGGCTCTGTAATCTGTACCCTTTTAACCACGACC | + |
|
Preference number: 2 (lower is better) Translates to: VPKRRRKEDAAFHTL*SCWGSVICTLLTTT Trigger: GGTCGTGGTTAAAAGGGTACAGATTACAGAGCCCCAGCATGACAATAGCGTGTGGAAGGCAGCATCTTCCTTTCTCCTCCTCTTAGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| 3UTR-3UTR TCA 90 bp | CTGTACCCTTTTAACCACGACCACAGCCTCAGCCAGCTCTGCTGTCTGCACGCTATACACAACCGACTCTaGCTTATTAATCTTGCCGCT | + |
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Preference number: 2 (lower is better) Translates to: LYPFNHDHSLSQLCCLHAIHNRL*LINLAA Trigger: AGCGGCAAGATTAATAAGTCAGAGTCGGTTGTGTAT...AGCGTGCAGACAGCAGAGCTGGCTGAGGCTGTGGTCGTGGTTAAAAGGGTACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068705.13 |
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| 3UTR-3UTR GCA 90 bp | GGTGTCTCTTCTCAATTCGAATGCATTCTTCTGCTCAGAAGACACAGGAAGCACAGCCTCAGCCAGCTCTaGTGTCTGCACGCTGACAAG | + |
|
Preference number: 2 (lower is better) Translates to: GVSSQFECILLLRRHRKHSLSQL*CLHADK Trigger: CTTGTCAGCGTGCAGACAGCAGAGCTGGCTGAGGCT...GTGCTTCCTGTGTCTTCTGAGCAGAAGAATGCATTCGAATTGAGAAGAGACACC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| 3UTR-3UTR CCA 90 bp | TCTGCACAAGCGTCCAGTTTGGAAATGTTTGGGTGTTCTCTTAGTCTTTCCGGACTGTGCGTAAATGACTaGGCCCTGGTGAGATCCGGC | + |
|
Preference number: 2 (lower is better) Translates to: SAQASSLEMFGCSLSLSGLCVND*ALVRSG Trigger: GCCGGATCTCACCAGGGCCCAGTCATTTACGCACAG...TCCGGAAAGACTAAGAGAACACCCAAACATTTCCAAACTGGACGCTTGTGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195410.6 |
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| 3UTR-3UTR CCA 90 bp | TTCGAATGCATTCTTCTGCTCAGAAGACACAGGAAGCACAGGTCTGCCATCTGGCCTAGGGAAGAAGGTTaGCTTGGCCAACAGAGGATT | + |
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Preference number: 2 (lower is better) Translates to: FECILLLRRHRKHRSAIWPREEG*LGQQRI Trigger: AATCCTCTGTTGGCCAAGCCAACCTTCTTCCCTAGG...CCAGATGGCAGACCTGTGCTTCCTGTGTCTTCTGAGCAGAAGAATGCATTCGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| 3UTR-3UTR CCA 90 bp | GTGGATAATCCCCAATGTACACCTGTCCTTGTGAGTAGTGGAAAAACGACACGGAGCTCCAGGAGACCGTaGTCAACCATCCAGTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: VDNPQCTPVLVSSGKTTRSSRRP*STIQLC Trigger: ACACAACTGGATGGTTGACCACGGTCTCCTGGAGCT...CCGTGTCGTTTTTCCACTACTCACAAGGACAGGTGTACATTGGGGATTATCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000193910.6 |
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| 3UTR-3UTR TCA 90 bp | GGTGTCTCTTCTCAATTCGAATGCATTCTTCTGCTCAGAAGACACAGGAAGCACCAGAGGATTTGGTTCTaGCTGGGCAGGGAGATCATG | + |
|
Preference number: 2 (lower is better) Translates to: GVSSQFECILLLRRHRKHQRIWF*LGREIM Trigger: CATGATCTCCCTGCCCAGTCAGAACCAAATCCTCTG...GTGCTTCCTGTGTCTTCTGAGCAGAAGAATGCATTCGAATTGAGAAGAGACACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| 3UTR-3UTR GCA 90 bp | CAATTCGAATGCATTCTTCTGCTCAGAAGACACAGGAAGCACAGGTCTGCCATCGAGGAGAAAGGAAGATaGTGCCTTCCACACGCTATT | + |
|
Preference number: 2 (lower is better) Translates to: QFECILLLRRHRKHRSAIEEKGR*CLPHAI Trigger: AATAGCGTGTGGAAGGCAGCATCTTCCTTTCTCCTC...GATGGCAGACCTGTGCTTCCTGTGTCTTCTGAGCAGAAGAATGCATTCGAATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| 3UTR-3UTR GCA 90 bp | CAAGGAGATGGTAAAGAACCTGGTGTCAGGAGGTATCTAGAGTGTGCAGTTCATGAGAAAGGAAGATGCTaGCTTCCACACGCTATTGTC | + |
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Preference number: 2 (lower is better) Translates to: QGDGKEPGVRRYLECAVHEKGRC*LPHAIV Trigger: GACAATAGCGTGTGGAAGGCAGCATCTTCCTTTCTC...ATGAACTGCACACTCTAGATACCTCCTGACACCAGGTTCTTTACCATCTCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| 3UTR-3UTR GCA 90 bp | TTCTCAATTCGAATGCATTCTTCTGCTCAGAAGACACAGGAAGCACAGGTCTGCGAGGAGAAAGGAAGATaGTGCCTTCCACACGCTATT | + |
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Preference number: 2 (lower is better) Translates to: FSIRMHSSAQKTQEAQVCEEKGR*CLPHAI Trigger: AATAGCGTGTGGAAGGCAGCATCTTCCTTTCTCCTC...GCAGACCTGTGCTTCCTGTGTCTTCTGAGCAGAAGAATGCATTCGAATTGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| 3UTR-3UTR CCA 90 bp | GTGGATAATCCCCAATGTACACCTGTCCTTGTGAGTAGTGGAAAAACGACACGGACTTCTCTGCCCCAATaGTCTCTAAGCACTGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: VDNPQCTPVLVSSGKTTRTSLPQ*SLSTEE Trigger: TTCTTCAGTGCTTAGAGACCATTGGGGCAGAGAAGT...CCGTGTCGTTTTTCCACTACTCACAAGGACAGGTGTACATTGGGGATTATCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000193910.6 |
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| 3UTR CAA 90 bp | ATATCCTCTATACATATTTTCTGCTCTCTCCGAGTATACATGTGCTaGTCCTTGCCCGAGTCCTCAAGGCCACATGCGGTTATGGACATT | + |
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Preference number: 2 (lower is better) Translates to: ISSIHIFCSLRVYMC*SLPESSRPHAVMDI Trigger: AATGTCCATAACCGCATGTGGCCTTGAGGACTCGGGCAAGGACAAGCACATGTATACTCGGAGAGAGCAGAAAATATGTATAGAGGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 ENSMUST00000191818.6 ENSMUST00000193948.2 ENSMUST00000194437.6 ENSMUST00000195410.6 |
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| 3UTR-3UTR TCA 90 bp | CTCAAGGCCACATGCGGTTATGGACATTTTCTGCACAAGCGTCCAGTTTGGAAAATACACAACCGACTCTaGCTTATTAATCTTGCCGCT | + |
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Preference number: 2 (lower is better) Translates to: LKATCGYGHFLHKRPVWKIHNRL*LINLAA Trigger: AGCGGCAAGATTAATAAGTCAGAGTCGGTTGTGTAT...TTTCCAAACTGGACGCTTGTGCAGAAAATGTCCATAACCGCATGTGGCCTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068705.13 ENSMUST00000191818.6 ENSMUST00000195410.6 |
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| 3UTR-3UTR CCA 90 bp | TTCTCAATTCGAATGCATTCTTCTGCTCAGAAGACACAGGAAGCACAGGTCTGCCACAAGCGTCCAGTTTaGAAATGTTTGGGTGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: FSIRMHSSAQKTQEAQVCHKRPV*KCLGVL Trigger: GAGAACACCCAAACATTTCCAAACTGGACGCTTGTG...GCAGACCTGTGCTTCCTGTGTCTTCTGAGCAGAAGAATGCATTCGAATTGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| 3UTR-3UTR GCA 90 bp | TCTCAATTCGAATGCATTCTTCTGCTCAGAAGACACAGGAAGCACAGGTCTGCCTCTAACTACAAGAAATaGTTAGACTGGTTGAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: SQFECILLLRRHRKHRSASNYKK*LDWLSP Trigger: AGGGCTCAACCAGTCTAAGCATTTCTTGTAGTTAGA...GGCAGACCTGTGCTTCCTGTGTCTTCTGAGCAGAAGAATGCATTCGAATTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| 3UTR-3UTR TCA 90 bp | ACCTCCAAGGCTGATATTCTAGCTGTCACTAACATTTACTCAGTTTCATACTCCCTGCACGGAGAGCAGTaGCATTCTTTCTGTCCATTA | + |
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Preference number: 2 (lower is better) Translates to: TSKADILAVTNIYSVSYSLHGEQ*HSFCPL Trigger: TAATGGACAGAAAGAATGTCACTGCTCTCCGTGCAG...GGAGTATGAAACTGAGTAAATGTTAGTGACAGCTAGAATATCAGCCTTGGAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193910.6 |
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| 3UTR GCA 72 bp | GCCTGCACACTGTCCTGCGAGCAGCTGGAACCAGGCTaGAGGCTCAGTCCAGGAAGGCCGGCCAGCAGCCAA | + |
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Preference number: 3 (lower is better) Translates to: ACTLSCEQLEPG*RLSPGRPASSQ Trigger: TTGGCTGCTGGCCGGCCTTCCTGGACTGAGCCTGCAGCCTGGTTCCAGCTGCTCGCAGGACAGTGTGCAGGC 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| 3UTR-3UTR CAA 90 bp | CCAGGCTGCAGGCTCAGTCCAGGAAGGCCGGCCAGCAGCCAACGGTTTCTGCCTTGGCCAACAGAGGATTaGGTTCTGACTGGGCAGGGA | + |
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Preference number: 3 (lower is better) Translates to: PGCRLSPGRPASSQRFLPWPTED*VLTGQG Trigger: TCCCTGCCCAGTCAGAACCAAATCCTCTGTTGGCCA...AGGCAGAAACCGTTGGCTGCTGGCCGGCCTTCCTGGACTGAGCCTGCAGCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| 3UTR GCA 72 bp | CAAGGGAGGTGGTGTGTGGAGTTAGGCCATGAGGCCTaGACACTGTCCTGCGAGCAGCTGGAACCAGGCTGC | + |
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Preference number: 3 (lower is better) Translates to: QGRWCVELGHEA*TLSCEQLEPGC Trigger: GCAGCCTGGTTCCAGCTGCTCGCAGGACAGTGTGCAGGCCTCATGGCCTAACTCCACACACCACCTCCCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| 3UTR GCA 72 bp | TCAGTCCAGGAAGGCCGGCCAGCAGCCAACGGTTTCTaGCTAGGGAAGAAGGTTGGCTTGGCCAACAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: SVQEGRPAANGF*LGKKVGLANRG Trigger: TCCTCTGTTGGCCAAGCCAACCTTCTTCCCTAGGCAGAAACCGTTGGCTGCTGGCCGGCCTTCCTGGACTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| 3UTR CCA 72 bp | ACTGTGGAGCAGCAAGAAAGGATGGTTACTGTACTGTaGAGCAGCACGGCGCCTGAATGGAAAGAGGAGGCG | + |
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Preference number: 3 (lower is better) Translates to: TVEQQERMVTVL*SSTAPEWKEEA Trigger: CGCCTCCTCTTTCCATTCAGGCGCCGTGCTGCTCCACAGTACAGTAACCATCCTTTCTTGCTGCTCCACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193910.6 |
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| 3UTR CCA 72 bp | AAGAACCCTAGACATCTCCAGTCTTCCACTATGCCCTaGGGCTTTTGTGAGTTTGGGCCTTGTGTGACCCCC | + |
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Preference number: 3 (lower is better) Translates to: KNPRHLQSSTMP*GFCEFGPCVTP Trigger: GGGGGTCACACAAGGCCCAAACTCACAAAAGCCCCAGGGCATAGTGGAAGACTGGAGATGTCTAGGGTTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193910.6 |
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| 3UTR GCA 72 bp | TTAACCACGACCACAGCCTCAGCCAGCTCTGCTGTCTaGACGCTGACAAGAACTCATTGTGAGATCGTAGCT | + |
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Preference number: 3 (lower is better) Translates to: LTTTTASASSAV*TLTRTHCEIVA Trigger: AGCTACGATCTCACAATGAGTTCTTGTCAGCGTGCAGACAGCAGAGCTGGCTGAGGCTGTGGTCGTGGTTAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| 3UTR GCA 72 bp | CATTCTTCTGCTCAGAAGACACAGGAAGCACAGGTCTaGCATCTGGACGTGGCCTCACTGTTATCTGTAGCC | + |
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Preference number: 3 (lower is better) Translates to: HSSAQKTQEAQV*HLDVASLLSVA Trigger: GGCTACAGATAACAGTGAGGCCACGTCCAGATGGCAGACCTGTGCTTCCTGTGTCTTCTGAGCAGAAGAATG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| 3UTR-3UTR CAA 90 bp | ACAGGAAGCACAGGTCTGCCATCTGGACGTGGCCTCACTGTTATCTGTAGCCAGAAGAAGAGGTGTCATTaGAACAAAGCCCACAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: TGSTGLPSGRGLTVICSQKKRCH*NKAHRA Trigger: TGCTCTGTGGGCTTTGTTCAAATGACACCTCTTCTT...CTGGCTACAGATAACAGTGAGGCCACGTCCAGATGGCAGACCTGTGCTTCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| 3UTR CCA 72 bp | TGTCCTTGCCCGAGTCCTCAAGGCCACATGCGGTTATaGACATTTTCTGCACAAGCGTCCAGTTTGGAAATG | + |
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Preference number: 3 (lower is better) Translates to: CPCPSPQGHMRL*TFSAQASSLEM Trigger: CATTTCCAAACTGGACGCTTGTGCAGAAAATGTCCATAACCGCATGTGGCCTTGAGGACTCGGGCAAGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 ENSMUST00000191818.6 ENSMUST00000193948.2 ENSMUST00000194437.6 ENSMUST00000195410.6 |
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| 3UTR-3UTR CAA 90 bp | TCCTCAAGGCCACATGCGGTTATGGACATTTTCTGCACAAGCGTCCAGTTTGGAGCACAAGCGTCCAGTTaGGAAATGTTTGGGTGTTCT | + |
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Preference number: 3 (lower is better) Translates to: SSRPHAVMDIFCTSVQFGAQASS*EMFGCS Trigger: AGAACACCCAAACATTTCCAAACTGGACGCTTGTGC...TCCAAACTGGACGCTTGTGCAGAAAATGTCCATAACCGCATGTGGCCTTGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 ENSMUST00000191818.6 ENSMUST00000193948.2 ENSMUST00000194437.6 ENSMUST00000195410.6 |
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| 3UTR TCA 72 bp | GTCCATTACTTCTCTGCCCCAATGGTCTCTAAGCACTaGAGAACCCTAGACATCTCCAGTCTTCCACTATGC | + |
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Preference number: 3 (lower is better) Translates to: VHYFSAPMVSKH*RTLDISSLPLC Trigger: GCATAGTGGAAGACTGGAGATGTCTAGGGTTCTTCAGTGCTTAGAGACCATTGGGGCAGAGAAGTAATGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193910.6 |
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| 3UTR GCA 72 bp | GAGTCCTCAAGGCCACATGCGGTTATGGACATTTTCTaGACAAGCGTCCAGTTTGGAAATGTTTGGGTGTTC | + |
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Preference number: 3 (lower is better) Translates to: ESSRPHAVMDIF*TSVQFGNVWVF Trigger: GAACACCCAAACATTTCCAAACTGGACGCTTGTGCAGAAAATGTCCATAACCGCATGTGGCCTTGAGGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 ENSMUST00000191818.6 ENSMUST00000193948.2 ENSMUST00000194437.6 ENSMUST00000195410.6 |
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| 3UTR GCA 72 bp | AAGCCATCCCTTTTAGGTGTCTCTTCTCAATTCGAATaGATTCTTCTGCTCAGAAGACACAGGAAGCACAGG | + |
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Preference number: 3 (lower is better) Translates to: KPSLLGVSSQFE*ILLLRRHRKHR Trigger: CCTGTGCTTCCTGTGTCTTCTGAGCAGAAGAATGCATTCGAATTGAGAAGAGACACCTAAAAGGGATGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| 3UTR-3UTR CAA 90 bp | AAAGCCATCCCTTTTAGGTGTCTCTTCTCAATTCGAATGCATTCTTCTGCTCAGAAGAAGAGGTGTCATTaGAACAAAGCCCACAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: KAIPFRCLFSIRMHSSAQKKRCH*NKAHRA Trigger: TGCTCTGTGGGCTTTGTTCAAATGACACCTCTTCTT...CTGAGCAGAAGAATGCATTCGAATTGAGAAGAGACACCTAAAAGGGATGGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| CDS-3UTR TCA 90 bp | CCAGGCTGCAGGCTCAGTCCAGGAAGGCCGGCCAGCAGCCAACGGTTTCTGCCTGTACACCTGTCCTTGTaGGTAGTGGAAAAACGACAC | + |
|
Preference number: 4 (lower is better) Translates to: PGCRLSPGRPASSQRFLPVHLSL*VVEKRH Trigger: GTGTCGTTTTTCCACTACTCACAAGGACAGGTGTAC...AGGCAGAAACCGTTGGCTGCTGGCCGGCCTTCCTGGACTGAGCCTGCAGCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| 3UTR CAA 72 bp | GCAGCCAACGGTTTCTGCCTAGGGAAGAAGGTTGGCTaGGCCAACAGAGGATTTGGTTCTGACTGGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AANGFCLGKKVG*ANRGFGSDWAG Trigger: CCCTGCCCAGTCAGAACCAAATCCTCTGTTGGCCAAGCCAACCTTCTTCCCTAGGCAGAAACCGTTGGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| CDS-3UTR CCA 90 bp | CCAGGCTGCAGGCTCAGTCCAGGAAGGCCGGCCAGCAGCCAACGGTTTCTGCCTGACTCGGTCTTTAAATaGTGGATAATCCCCAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: PGCRLSPGRPASSQRFLPDSVFK*WIIPNV Trigger: TACATTGGGGATTATCCACCATTTAAAGACCGAGTC...AGGCAGAAACCGTTGGCTGCTGGCCGGCCTTCCTGGACTGAGCCTGCAGCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| CDS-3UTR CCA 90 bp | CATCTGGACGTGGCCTCACTGTTATCTGTAGCCAGGCCCAGAACGCAGAGTTGCTTAATCTTGCCGCTGTaGTGTCCGCCAGAGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HLDVASLLSVARPRTQSCLILPL*CPPEWS Trigger: AGACCACTCTGGCGGACACCACAGCGGCAAGATTAA...GCAACTCTGCGTTCTGGGCCTGGCTACAGATAACAGTGAGGCCACGTCCAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111435.9 |
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| 3UTR CAA 72 bp | CTCACTGTTATCTGTAGCCAGGCCCAGAACGCAGAGTaGCAGGAAAGAGACCGAATACTCCAAGGGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LTVICSQAQNAE*QERDRILQGRW Trigger: CCACCTCCCTTGGAGTATTCGGTCTCTTTCCTGCAACTCTGCGTTCTGGGCCTGGCTACAGATAACAGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| CDS-3UTR GCA 90 bp | CCCGAGTCCTCAAGGCCACATGCGGTTATGGACATTTTCTGCACAAGCGTCCAGAACGCTCTGAGGTACTaGAGCTATTTCCACCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: PESSRPHAVMDIFCTSVQNALRY*SYFHHV Trigger: CACGTGGTGGAAATAGCTGCAGTACCTCAGAGCGTT...CTGGACGCTTGTGCAGAAAATGTCCATAACCGCATGTGGCCTTGAGGACTCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195410.6 |
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| CDS-3UTR TCA 90 bp | AGCAAGAAAGGATGGTTACTGTACTGTGGAGCAGCACGGCGCCTGAATGGAAAGTTGAGTGGGGGTGAATaGCCCTTTCAGAGTCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: SKKGWLLYCGAARRLNGKLSGGE*PFQSHL Trigger: CAGGTGACTCTGAAAGGGTCATTCACCCCCACTCAA...CTTTCCATTCAGGCGCCGTGCTGCTCCACAGTACAGTAACCATCCTTTCTTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193910.6 |
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| CDS-3UTR TCA 90 bp | AGACATCTCCAGTCTTCCACTATGCCCTGGGGCTTTTGTGAGTTTGGGCCTTGTCCTCTTGAGTGGGGGTaGATGACCCTTTCAGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: RHLQSSTMPWGFCEFGPCPLEWG*MTLSES Trigger: TGACTCTGAAAGGGTCATTCACCCCCACTCAAGAGG...ACAAGGCCCAAACTCACAAAAGCCCCAGGGCATAGTGGAAGACTGGAGATGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000193910.6 |
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| CDS-3UTR CCA 90 bp | TCCTCAAGGCCACATGCGGTTATGGACATTTTCTGCACAAGCGTCCAGTTTGGATTAATCTTGCCGCTGTaGTGTCCGCCAGAGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSRPHAVMDIFCTSVQFGLILPL*CPPEWS Trigger: AGACCACTCTGGCGGACACCACAGCGGCAAGATTAA...TCCAAACTGGACGCTTGTGCAGAAAATGTCCATAACCGCATGTGGCCTTGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111435.9 ENSMUST00000193948.2 ENSMUST00000194437.6 |
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| CDS-3UTR CCA 90 bp | ACATGCGGTTATGGACATTTTCTGCACAAGCGTCCAGTTTGGAAATGTTTGGGTCTGTGCGTAAATGACTaGGCCCTGGTGAGATCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TCGYGHFLHKRPVWKCLGLCVND*ALVRSG Trigger: GCCGGATCTCACCAGGGCCCAGTCATTTACGCACAG...ACCCAAACATTTCCAAACTGGACGCTTGTGCAGAAAATGTCCATAACCGCATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111435.9 |
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| CDS-3UTR CCA 90 bp | CAAGGCCACATGCGGTTATGGACATTTTCTGCACAAGCGTCCAGTTTGGAAATGTTAATCTTGCCGCTGTaGTGTCCGCCAGAGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QGHMRLWTFSAQASSLEMLILPL*CPPEWS Trigger: AGACCACTCTGGCGGACACCACAGCGGCAAGATTAA...CATTTCCAAACTGGACGCTTGTGCAGAAAATGTCCATAACCGCATGTGGCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111435.9 ENSMUST00000193948.2 ENSMUST00000194437.6 |
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| CDS-3UTR CCA 90 bp | GGTGTCTCTTCTCAATTCGAATGCATTCTTCTGCTCAGAAGACACAGGAAGCACAGCTCCAGGAGACCGTaGTCAACCATCCAGTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GVSSQFECILLLRRHRKHSSRRP*STIQLC Trigger: ACACAACTGGATGGTTGACCACGGTCTCCTGGAGCT...GTGCTTCCTGTGTCTTCTGAGCAGAAGAATGCATTCGAATTGAGAAGAGACACC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| 3UTR CAA 72 bp | ACCTGGTGTCAGGAGGTATCTAGAGTGTGCAGTTCATaGATAGCGTCCCTAAGAGGAGGAGAAAGGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: TWCQEVSRVCSS*IASLRGGERKM Trigger: CATCTTCCTTTCTCCTCCTCTTAGGGACGCTATCAATGAACTGCACACTCTAGATACCTCCTGACACCAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| CDS-3UTR CCA 90 bp | TTTAACCACGACCACAGCCTCAGCCAGCTCTGCTGTCTGCACGCTGACAAGAACATTTCTTTAGGAGTATaGACCTCCAAGGCTGATATT | + |
|
Preference number: 4 (lower is better) Translates to: FNHDHSLSQLCCLHADKNISLGV*TSKADI Trigger: AATATCAGCCTTGGAGGTCCATACTCCTAAAGAAAT...GTTCTTGTCAGCGTGCAGACAGCAGAGCTGGCTGAGGCTGTGGTCGTGGTTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| CDS-3UTR CCA 90 bp | CTTGCCCGAGTCCTCAAGGCCACATGCGGTTATGGACATTTTCTGCACAAGCGTGACTCGGTCTTTAAATaGTGGATAATCCCCAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: LARVLKATCGYGHFLHKRDSVFK*WIIPNV Trigger: TACATTGGGGATTATCCACCATTTAAAGACCGAGTC...ACGCTTGTGCAGAAAATGTCCATAACCGCATGTGGCCTTGAGGACTCGGGCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 ENSMUST00000191818.6 ENSMUST00000193948.2 ENSMUST00000195410.6 |
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| CDS-3UTR TCA 90 bp | TTGGAAATGTTTGGGTGTTCTCTTAGTCTTTCCGGATGTCCGCATACACAACCGGTACACCTGTCCTTGTaGGTAGTGGAAAAACGACAC | + |
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Preference number: 4 (lower is better) Translates to: LEMFGCSLSLSGCPHTQPVHLSL*VVEKRH Trigger: GTGTCGTTTTTCCACTACTCACAAGGACAGGTGTAC...CGGTTGTGTATGCGGACATCCGGAAAGACTAAGAGAACACCCAAACATTTCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068705.13 ENSMUST00000191818.6 ENSMUST00000195410.6 |
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| CDS-3UTR TCA 90 bp | TTCGAATGCATTCTTCTGCTCAGAAGACACAGGAAGCACAGGTCTGCCATCTGGATACACAACCGACTCTaGCTTATTAATCTTGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: FECILLLRRHRKHRSAIWIHNRL*LINLAA Trigger: AGCGGCAAGATTAATAAGTCAGAGTCGGTTGTGTAT...CCAGATGGCAGACCTGTGCTTCCTGTGTCTTCTGAGCAGAAGAATGCATTCGAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111435.9 |
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| CDS-3UTR TCA 90 bp | TCCAGTTTGGAAATGTTTGGGTGTTCTCTTAGTCTTTCCGGATGTCCGCATACAGTACACCTGTCCTTGTaGGTAGTGGAAAAACGACAC | + |
|
Preference number: 4 (lower is better) Translates to: SSLEMFGCSLSLSGCPHTVHLSL*VVEKRH Trigger: GTGTCGTTTTTCCACTACTCACAAGGACAGGTGTAC...TGTATGCGGACATCCGGAAAGACTAAGAGAACACCCAAACATTTCCAAACTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068705.13 ENSMUST00000191818.6 ENSMUST00000195410.6 |
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| CDS-3UTR TCA 90 bp | ATGCGGTTATGGACATTTTCTGCACAAGCGTCCAGTTTGGAAATGTTTGGGTGTGTACACCTGTCCTTGTaGGTAGTGGAAAAACGACAC | + |
|
Preference number: 4 (lower is better) Translates to: MRLWTFSAQASSLEMFGCVHLSL*VVEKRH Trigger: GTGTCGTTTTTCCACTACTCACAAGGACAGGTGTAC...ACACCCAAACATTTCCAAACTGGACGCTTGTGCAGAAAATGTCCATAACCGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 ENSMUST00000191818.6 ENSMUST00000195410.6 |
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| CDS-3UTR CCA 90 bp | CCTCAAGGCCACATGCGGTTATGGACATTTTCTGCACAAGCGTCCAGTTTGGAAGACTCGGTCTTTAAATaGTGGATAATCCCCAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: PQGHMRLWTFSAQASSLEDSVFK*WIIPNV Trigger: TACATTGGGGATTATCCACCATTTAAAGACCGAGTC...TTCCAAACTGGACGCTTGTGCAGAAAATGTCCATAACCGCATGTGGCCTTGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 ENSMUST00000191818.6 ENSMUST00000193948.2 ENSMUST00000195410.6 |
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| CDS-3UTR CCA 90 bp | CCTCAAGGCCACATGCGGTTATGGACATTTTCTGCACAAGCGTCCAGTTTGGAAATTTCTTTAGGAGTATaGACCTCCAAGGCTGATATT | + |
|
Preference number: 4 (lower is better) Translates to: PQGHMRLWTFSAQASSLEISLGV*TSKADI Trigger: AATATCAGCCTTGGAGGTCCATACTCCTAAAGAAAT...TTCCAAACTGGACGCTTGTGCAGAAAATGTCCATAACCGCATGTGGCCTTGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 ENSMUST00000191818.6 ENSMUST00000194437.6 |
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| CDS-3UTR CCA 90 bp | CAATTCGAATGCATTCTTCTGCTCAGAAGACACAGGAAGCACAGGTCTGCCATCATTTCTTTAGGAGTATaGACCTCCAAGGCTGATATT | + |
|
Preference number: 4 (lower is better) Translates to: QFECILLLRRHRKHRSAIISLGV*TSKADI Trigger: AATATCAGCCTTGGAGGTCCATACTCCTAAAGAAAT...GATGGCAGACCTGTGCTTCCTGTGTCTTCTGAGCAGAAGAATGCATTCGAATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| CDS-3UTR CCA 90 bp | CTCAAGGCCACATGCGGTTATGGACATTTTCTGCACAAGCGTCCAGTTTGGAAAATTTCTTTAGGAGTATaGACCTCCAAGGCTGATATT | + |
|
Preference number: 4 (lower is better) Translates to: LKATCGYGHFLHKRPVWKISLGV*TSKADI Trigger: AATATCAGCCTTGGAGGTCCATACTCCTAAAGAAAT...TTTCCAAACTGGACGCTTGTGCAGAAAATGTCCATAACCGCATGTGGCCTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 ENSMUST00000191818.6 ENSMUST00000194437.6 |
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| CDS-3UTR CCA 90 bp | TTCTCAATTCGAATGCATTCTTCTGCTCAGAAGACACAGGAAGCACAGGTCTGCGACTCGGTCTTTAAATaGTGGATAATCCCCAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: FSIRMHSSAQKTQEAQVCDSVFK*WIIPNV Trigger: TACATTGGGGATTATCCACCATTTAAAGACCGAGTC...GCAGACCTGTGCTTCCTGTGTCTTCTGAGCAGAAGAATGCATTCGAATTGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 |
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| CDS-3UTR CCA 90 bp | AAGGCCACATGCGGTTATGGACATTTTCTGCACAAGCGTCCAGTTTGGAAATGTGACTCGGTCTTTAAATaGTGGATAATCCCCAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: KATCGYGHFLHKRPVWKCDSVFK*WIIPNV Trigger: TACATTGGGGATTATCCACCATTTAAAGACCGAGTC...ACATTTCCAAACTGGACGCTTGTGCAGAAAATGTCCATAACCGCATGTGGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068705.13 ENSMUST00000111435.9 ENSMUST00000191818.6 ENSMUST00000193948.2 ENSMUST00000195410.6 |
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