RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MPV17L2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000035559

Ensembl transcript IDs: ENSMUST00000038626.10, ENSMUST00000212617.2

Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCATCAAGTTTTCTGAGGCCAAACCAGACCCCACTTCAAGGCTGTaGAGGGTGTCCAGGCAGACAGAGGGCTTCATGGTCCCACTGGAA +
Preference number: 1 (lower is better)
Translates to: CIKFSEAKPDPTSRL*RVSRQTEGFMVPLE
Trigger: TTCCAGTGGGACCATGAAGCCCTCTGTCTGCCTGGACACCCTCCACAGCCTTGAAGTGGGGTCTGGTTTGGCCTCAGAAAACTTGATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038626.10
3UTR CAA 90 bp GGCAGCTCTCCTCTAGTGTCTGACCCTCCAGGCTGCCAAGGCCAGTaGGTAGCAAACTCAAGGCAGCGAGAGTACATGATGCCTCCTAGA +
Preference number: 2 (lower is better)
Translates to: GSSPLVSDPPGCQGQ*VANSRQREYMMPPR
Trigger: TCTAGGAGGCATCATGTACTCTCGCTGCCTTGAGTTTGCTACCAACTGGCCTTGGCAGCCTGGAGGGTCAGACACTAGAGGAGAGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212617.2
3UTR CCA 72 bp GGAGGGCGGACAGCCTGTGCTGGCGTCTGTTCTACATaGGAACAGTCTCTGGTGGACTCAAGGGACTGCTGG +
Preference number: 3 (lower is better)
Translates to: GGRTACAGVCST*EQSLVDSRDCW
Trigger: CCAGCAGTCCCTTGAGTCCACCAGAGACTGTTCCCATGTAGAACAGACGCCAGCACAGGCTGTCCGCCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038626.10
3UTR CCA 72 bp CCTGTGCTGGCGTCTGTTCTACATGGGAACAGTCTCTaGTGGACTCAAGGGACTGCTGGTCCAGGGGCAGTC +
Preference number: 3 (lower is better)
Translates to: PVLASVLHGNSL*WTQGTAGPGAV
Trigger: GACTGCCCCTGGACCAGCAGTCCCTTGAGTCCACCAGAGACTGTTCCCATGTAGAACAGACGCCAGCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038626.10
3UTR CCA 72 bp ACATGGGAACAGTCTCTGGTGGACTCAAGGGACTGCTaGTCCAGGGGCAGTCAGCCTGGGTTTTGGACATGG +
Preference number: 3 (lower is better)
Translates to: TWEQSLVDSRDC*SRGSQPGFWTW
Trigger: CCATGTCCAAAACCCAGGCTGACTGCCCCTGGACCAGCAGTCCCTTGAGTCCACCAGAGACTGTTCCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038626.10
3UTR-3UTR CAA 90 bp CAGTCTCTGGTGGACTCAAGGGACTGCTGGTCCAGGGGCAGTCAGCCTGGGTTTATGGCCCAGAGCTTTTaGACCAGCTTCGGTAATCTC +
Preference number: 3 (lower is better)
Translates to: QSLVDSRDCWSRGSQPGFMAQSF*TSFGNL
Trigger: GAGATTACCGAAGCTGGTCAAAAAGCTCTGGGCCAT...AAACCCAGGCTGACTGCCCCTGGACCAGCAGTCCCTTGAGTCCACCAGAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038626.10
3UTR TCA 72 bp ATTTCCGCACCCTGCCCAGCCTTGCATCAAGTTTTCTaGGGCCAAACCAGACCCCACTTCAAGGCTGTGGAG +
Preference number: 3 (lower is better)
Translates to: ISAPCPALHQVF*GQTRPHFKAVE
Trigger: CTCCACAGCCTTGAAGTGGGGTCTGGTTTGGCCTCAGAAAACTTGATGCAAGGCTGGGCAGGGTGCGGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038626.10
3UTR CCA 72 bp AGAGGCAGGTGGATCTATGTGAGTTTGACACCAGCCTaGTCTTCAGAGCAAGTTCCTCCAGGGCAGCAAGGT +
Preference number: 3 (lower is better)
Translates to: RGRWIYVSLTPA*SSEQVPPGQQG
Trigger: ACCTTGCTGCCCTGGAGGAACTTGCTCTGAAGACCAGGCTGGTGTCAAACTCACATAGATCCACCTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212617.2
CDS-3UTR TCA 90 bp TGGTGGACTCAAGGGACTGCTGGTCCAGGGGCAGTCAGCCTGGGTTTTGGACATCATCGCCCGCGGCCATaGGCACGCCGCAGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: WWTQGTAGPGAVSLGFGHHRPRP*ARRSPV
Trigger: CACTGGGCTGCGGCGTGCTCATGGCCGCGGGCGATG...ATGTCCAAAACCCAGGCTGACTGCCCCTGGACCAGCAGTCCCTTGAGTCCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038626.10
CDS-3UTR TCA 90 bp ACAGTCTCTGGTGGACTCAAGGGACTGCTGGTCCAGGGGCAGTCAGCCTGGGTTAGCCCAGTGTGTTGGTaGGGAGCAGCGCGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: TVSGGLKGLLVQGQSAWVSPVCW*GAARGP
Trigger: AGGGCCGCGCGCTGCTCCTCACCAACACACTGGGCT...AACCCAGGCTGACTGCCCCTGGACCAGCAGTCCCTTGAGTCCACCAGAGACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038626.10
CDS-3UTR CCA 90 bp CAAGGGACTGCTGGTCCAGGGGCAGTCAGCCTGGGTTTTGGACATGGCCCAGAGTTGGCCCGCAGCTCCTaGCAGCTCTCCTCTAGTGTC +
Preference number: 4 (lower is better)
Translates to: QGTAGPGAVSLGFGHGPELARSS*QLSSSV
Trigger: GACACTAGAGGAGAGCTGCCAGGAGCTGCGGGCCAA...CTCTGGGCCATGTCCAAAACCCAGGCTGACTGCCCCTGGACCAGCAGTCCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038626.10
CDS-3UTR GCA 90 bp CGTCTGTTCTACATGGGAACAGTCTCTGGTGGACTCAAGGGACTGCTGGTCCAGGGAAGGGGCCCATGCTaGAGCCCACGGCGAACATGC +
Preference number: 4 (lower is better)
Translates to: RLFYMGTVSGGLKGLLVQGRGPC*SPRRTC
Trigger: GCATGTTCGCCGTGGGCTGCAGCATGGGCCCCTTCC...CTGGACCAGCAGTCCCTTGAGTCCACCAGAGACTGTTCCCATGTAGAACAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038626.10
CDS-3UTR TCA 90 bp TGTTCTACATGGGAACAGTCTCTGGTGGACTCAAGGGACTGCTGGTCCAGGGGCCTCTCCTCTAGTGTCTaGCCCTCCAGGCTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: CSTWEQSLVDSRDCWSRGLSSSV*PSRLPR
Trigger: CCTTGGCAGCCTGGAGGGTCAGACACTAGAGGAGAG...GCCCCTGGACCAGCAGTCCCTTGAGTCCACCAGAGACTGTTCCCATGTAGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038626.10
CDS-3UTR CCA 90 bp TGGTGGACTCAAGGGACTGCTGGTCCAGGGGCAGTCAGCCTGGGTTTTGGACATAGGAAGTTCACTAGCTaGGCAGCTGGCCACACACAC +
Preference number: 4 (lower is better)
Translates to: WWTQGTAGPGAVSLGFGHRKFTS*AAGHTH
Trigger: GTGTGTGTGGCCAGCTGCCCAGCTAGTGAACTTCCT...ATGTCCAAAACCCAGGCTGACTGCCCCTGGACCAGCAGTCCCTTGAGTCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038626.10
CDS-3UTR GCA 90 bp GGTAATCTCCTGTGGGAGTGTATCCATCGGCCAACTCATCTGCCAGGCTTCAGTTCTGACCCTCCAGGCTaGCAAGGCCCAGGAAGTACC +
Preference number: 4 (lower is better)
Translates to: GNLLWECIHRPTHLPGFSSDPPG*QGPGST
Trigger: GGTACTTCCTGGGCCTTGGCAGCCTGGAGGGTCAGA...ACTGAAGCCTGGCAGATGAGTTGGCCGATGGATACACTCCCACAGGAGATTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038626.10
3UTR CAA 72 bp CCTCTAGTGTCTGACCCTCCAGGCTGCCAAGGCCAGTaGGTAGCAAACTCAAGGCAGCGAGAGTACATGATG +
Preference number: 4 (lower is better)
Translates to: PLVSDPPGCQGQ*VANSRQREYMM
Trigger: CATCATGTACTCTCGCTGCCTTGAGTTTGCTACCAACTGGCCTTGGCAGCCTGGAGGGTCAGACACTAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212617.2
CDS-3UTR TCA 90 bp TCTACATGGGAACAGTCTCTGGTGGACTCAAGGGACTGCTGGTCCAGGGGCAGTGGAAATGAGAAGGGATaGAGAGGAAGTTCACTAGCT +
Preference number: 4 (lower is better)
Translates to: STWEQSLVDSRDCWSRGSGNEKG*RGSSLA
Trigger: AGCTAGTGAACTTCCTCTTCATCCCTTCTCATTTCC...ACTGCCCCTGGACCAGCAGTCCCTTGAGTCCACCAGAGACTGTTCCCATGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038626.10
CDS-3UTR CAA 90 bp CAGTCTCTGGTGGACTCAAGGGACTGCTGGTCCAGGGGCAGTCAGCCTGGGTTTCCCGCAGCCAACGCCTaGCGAGCCCAGCGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: QSLVDSRDCWSRGSQPGFPAANA*RAQRQP
Trigger: AGGCTGGCGCTGGGCTCGCAAGGCGTTGGCTGCGGG...AAACCCAGGCTGACTGCCCCTGGACCAGCAGTCCCTTGAGTCCACCAGAGACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038626.10
CDS-3UTR CAA 90 bp CAGCCTTGCATCAAGTTTTCTGAGGCCAAACCAGACCCCACTTCAAGGCTGTGGCCGCAGCCCAGTGTGTaGGTGAGGAGCAGCGCGCGG +
Preference number: 5 (lower is better)
Translates to: QPCIKFSEAKPDPTSRLWPQPSV*VRSSAR
Trigger: CCGCGCGCTGCTCCTCACCAACACACTGGGCTGCGG...CCACAGCCTTGAAGTGGGGTCTGGTTTGGCCTCAGAAAACTTGATGCAAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038626.10
CDS TCA 90 bp AGGCCCAGGAAGTACCAGACGCCCAGAATGGGAGATGCCACCGTTTaGTCCACTAGCACCTTCTTCATCACACTCGGGAGGCTTCGTAGG +
Preference number: 5 (lower is better)
Translates to: RPRKYQTPRMGDATV*STSTFFITLGRLRR
Trigger: CCTACGAAGCCTCCCGAGTGTGATGAAGAAGGTGCTAGTGGATCAAACGGTGGCATCTCCCATTCTGGGCGTCTGGTACTTCCTGGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038626.10
CDS TCA 90 bp AAACCCAGGAAGTACCAGACGCCCAGAATGGGAGATGCCACCGTTTaGTCCACTAGCACCTTCTTCATCACACTCGGGAGGCTTCGTAGG +
Preference number: 5 (lower is better)
Translates to: KPRKYQTPRMGDATV*STSTFFITLGRLRR
Trigger: CCTACGAAGCCTCCCGAGTGTGATGAAGAAGGTGCTAGTGGATCAAACGGTGGCATCTCCCATTCTGGGCGTCTGGTACTTCCTGGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212617.2
CDS TCA 72 bp GGGGCCCATGCTGCAGCCCACGGCGAACATGCTGGCTaGGCGCCGCGCGCTGAATCTCTGTCCAGGCCGCGC +
Preference number: 6 (lower is better)
Translates to: GAHAAAHGEHAG*APRAESLSRPR
Trigger: GCGCGGCCTGGACAGAGATTCAGCGCGCGGCGCTCAGCCAGCATGTTCGCCGTGGGCTGCAGCATGGGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038626.10
CDS GCA 72 bp ACCACAGATACCAGAAGTGTAGGAAGGGGCCCATGCTaGAGCCCACGGCGAACATGCTGGCTGAGCGCCGCG +
Preference number: 6 (lower is better)
Translates to: TTDTRSVGRGPC*SPRRTCWLSAA
Trigger: CGCGGCGCTCAGCCAGCATGTTCGCCGTGGGCTGCAGCATGGGCCCCTTCCTACACTTCTGGTATCTGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038626.10
CDS GCA 72 bp CCAACCACAGATACCAGAAGTGTAGGAAGGGGCCCATaGTGCAGCCCACGGCGAACATGCTGGCTGAGCGCC +
Preference number: 6 (lower is better)
Translates to: PTTDTRSVGRGP*CSPRRTCWLSA
Trigger: GGCGCTCAGCCAGCATGTTCGCCGTGGGCTGCAGCATGGGCCCCTTCCTACACTTCTGGTATCTGTGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038626.10
CDS TCA 72 bp AAGTACCAGACGCCCAGAATGGGAGATGCCACCGTTTaGTCCACTAGCACCTTCTTCATCACACTCGGGAGG +
Preference number: 6 (lower is better)
Translates to: KYQTPRMGDATV*STSTFFITLGR
Trigger: CCTCCCGAGTGTGATGAAGAAGGTGCTAGTGGATCAAACGGTGGCATCTCCCATTCTGGGCGTCTGGTACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038626.10
ENSMUST00000212617.2
CDS CCA 72 bp ACACAAAGAAACCCAGGAAGTACCAGACGCCCAGAATaGGAGATGCCACCGTTTGATCCACTAGCACCTTCT +
Preference number: 6 (lower is better)
Translates to: TQRNPGSTRRPE*EMPPFDPLAPS
Trigger: AGAAGGTGCTAGTGGATCAAACGGTGGCATCTCCCATTCTGGGCGTCTGGTACTTCCTGGGTTTCTTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212617.2