Pregenerated sensors for MPV17L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022679Ensembl transcript IDs: ENSMUST00000023360.14, ENSMUST00000124947.8, ENSMUST00000128757.8, ENSMUST00000141971.8, ENSMUST00000148966.2
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCCGGACCTTCGGAAGAGCAGTCGGGTGCTCCTACCCACT | + |
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Preference number: 1 (lower is better) Translates to: ISLRMVVSHHVVAGI*TPDLRKSSRVLLPT Trigger: AGTGGGTAGGAGCACCCGACTGCTCTTCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR CCA 90 bp | GAGTCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCCGGACCTTCGGAAGAGCAGTCGGGTGCTCCT | + |
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Preference number: 1 (lower is better) Translates to: ESDLITDGCEPPCGC*DLNSGPSEEQSGAP Trigger: AGGAGCACCCGACTGCTCTTCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATCTGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR TCA 90 bp | CTCCTACCCACTGAGCCATCTCACCAGCCCGAGAGTTCTGCATCTTaGTCTGAAGACAGACAGAAGGGGATTCTCTTCCACAGGCAACCA | + |
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Preference number: 1 (lower is better) Translates to: LLPTEPSHQPESSAS*SEDRQKGILFHRQP Trigger: TGGTTGCCTGTGGAAGAGAATCCCCTTCTGTCTGTCTTCAGATCAAGATGCAGAACTCTCGGGCTGGTGAGATGGCTCAGTGGGTAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR GCA 90 bp | CATGTGGTTCTCACTTCATGCTTCCTGCTCCATCCATCCCCCTTCTaGCTCCTTCCTCACTTTTGCCTCCTTCTAAACCCTCCTCATCTG | + |
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Preference number: 1 (lower is better) Translates to: HVVLTSCFLLHPSPF*LLPHFCLLLNPPHL Trigger: CAGATGAGGAGGGTTTAGAAGGAGGCAAAAGTGAGGAAGGAGGCAGAAGGGGGATGGATGGAGCAGGAAGCATGAAGTGAGAACCACATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR GCA 90 bp | CATATTCAAACCACCACACCATCTCTCCATGTGGTTCTCACTTCATaGTTCCTGCTCCATCCATCCCCCTTCTGCCTCCTTCCTCACTTT | + |
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Preference number: 1 (lower is better) Translates to: HIQTTTPSLHVVLTS*FLLHPSPFCLLPHF Trigger: AAAGTGAGGAAGGAGGCAGAAGGGGGATGGATGGAGCAGGAAGCATGAAGTGAGAACCACATGGAGAGATGGTGTGGTGGTTTGAATATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR CAA 90 bp | GATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCCGGACCTTCGGAAGAGCAGTCGGGTGCTCCTACCCAC | + |
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Preference number: 2 (lower is better) Translates to: DLITDGCEPPCGCWD*NSGPSEEQSGAPTH Trigger: GTGGGTAGGAGCACCCGACTGCTCTTCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCAACCAGGAGGAGGGTCTCTCCTTACAGGGCAGAGCTTGAGTGAGCATAGGCTGGGATGCAGCCAGTaGCAGAGCACTTGTTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: RQPGGGSLLTGQSLSEHRLGCSQ*QSTCLC Trigger: ACACAAACAAGTGCTCTGCCACTGGCTGCATCCCAG...CCTATGCTCACTCAAGCTCTGCCCTGTAAGGAGAGACCCTCCTCCTGGTTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR CAA 90 bp | TTCCACAGGCAACCAGGAGGAGGGTCTCTCCTTACAGGGCAGAGCTaGAGTGAGCATAGGACCTCAAAGTCCACCCACAAAGTGACACAC | + |
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Preference number: 2 (lower is better) Translates to: FHRQPGGGSLLTGQS*SEHRTSKSTHKVTH Trigger: GTGTGTCACTTTGTGGGTGGACTTTGAGGTCCTATGCTCACTCAAGCTCTGCCCTGTAAGGAGAGACCCTCCTCCTGGTTGCCTGTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGTGTGTCTGCCTGCACAGAAGTTATGCCCCATACTTCTGCCCCAGTTCCAGCTGGGATGCAGCCAGTaGCAGAGCACTTGTTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: PVCLPAQKLCPILLPQFQLGCSQ*QSTCLC Trigger: ACACAAACAAGTGCTCTGCCACTGGCTGCATCCCAG...CTGGAACTGGGGCAGAAGTATGGGGCATAACTTCTGTGCAGGCAGACACACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGTGTGTCTGCCTGCACAGAAGTTATGCCCCATACTTCTGCCCCAGTTCCAGCCTTTCAGACTGGAATaGCTGGGAAAGGTTTGGATA | + |
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Preference number: 2 (lower is better) Translates to: PVCLPAQKLCPILLPQFQPFRLE*LGKVWI Trigger: TATCCAAACCTTTCCCAGTCATTCCAGTCTGAAAGG...CTGGAACTGGGGCAGAAGTATGGGGCATAACTTCTGTGCAGGCAGACACACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR-3UTR TCA 90 bp | AGGCAACCAGGAGGAGGGTCTCTCCTTACAGGGCAGAGCTTGAGTGAGCATAGGAGTCCACCCACAAAGTaGCACACTTCCTTTAACAAA | + |
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Preference number: 2 (lower is better) Translates to: RQPGGGSLLTGQSLSEHRSPPTK*HTSFNK Trigger: TTTGTTAAAGGAAGTGTGTCACTTTGTGGGTGGACT...CCTATGCTCACTCAAGCTCTGCCCTGTAAGGAGAGACCCTCCTCCTGGTTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGTGTGTCTGCCTGCACAGAAGTTATGCCCCATACTTCTGCCCCAGTTCCAGTTTGGCACTGAGGGCTaGTTGAGAATCATCTTTTTG | + |
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Preference number: 2 (lower is better) Translates to: PVCLPAQKLCPILLPQFQFGTEG*LRIIFL Trigger: CAAAAAGATGATTCTCAAGCAGCCCTCAGTGCCAAA...CTGGAACTGGGGCAGAAGTATGGGGCATAACTTCTGTGCAGGCAGACACACAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCATGCAGGCAGACATCGTGCTGGAGAAGGAGCTGAGAGTTCTGCATCTTTTCACCATCTCTCCATGTaGTTCTCACTTCATGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: QHAGRHRAGEGAESSASFHHLSM*FSLHAS Trigger: GGAAGCATGAAGTGAGAACCACATGGAGAGATGGTG...AAAAGATGCAGAACTCTCAGCTCCTTCTCCAGCACGATGTCTGCCTGCATGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128757.8 |
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| 3UTR-3UTR GCA 90 bp | CATCTTTTTGGGCAGGTAGGAAGGACAAACACACATAGAAAACTGGCGATGGGCCAGAGGCAGGAGGGTTaGTACAAACTGTGTAGACTG | + |
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Preference number: 2 (lower is better) Translates to: HLFGQVGRTNTHRKLAMGQRQEG*YKLCRL Trigger: CAGTCTACACAGTTTGTAGCAACCCTCCTGCCTCTG...GCCCATCGCCAGTTTTCTATGTGTGTTTGTCCTTCCTACCTGCCCAAAAAGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 ENSMUST00000141971.8 |
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| 3UTR-3UTR GCA 90 bp | AAACCACACCTCATAATAGTGCCACTTCCCATGGGCCAAGCATATTCAAACCACCATCCATCCCCCTTCTaGCTCCTTCCTCACTTTTGC | + |
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Preference number: 2 (lower is better) Translates to: KPHLIIVPLPMGQAYSNHHPSPF*LLPHFC Trigger: GCAAAAGTGAGGAAGGAGGCAGAAGGGGGATGGATG...GTGGTTTGAATATGCTTGGCCCATGGGAAGTGGCACTATTATGAGGTGTGGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR-3UTR TCA 90 bp | TACACTGTAGCTGTCCTCAGACACTCCAGAAGAGGGAGTCAGATCTCATTACGGCCTTTCAGACTGGAATaGCTGGGAAAGGTTTGGATA | + |
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Preference number: 2 (lower is better) Translates to: YTVAVLRHSRRGSQISLRPFRLE*LGKVWI Trigger: TATCCAAACCTTTCCCAGTCATTCCAGTCTGAAAGG...CCGTAATGAGATCTGACTCCCTCTTCTGGAGTGTCTGAGGACAGCTACAGTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR-3UTR TCA 90 bp | AATAGTGCCACTTCCCATGGGCCAAGCATATTCAAACCACCACACCATCTCTCCCCTCCATTAACTTTCTaGATAGACAGGCACACACCT | + |
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Preference number: 2 (lower is better) Translates to: NSATSHGPSIFKPPHHLSPPLTF*IDRHTP Trigger: AGGTGTGTGCCTGTCTATTCAGAAAGTTAATGGAGG...GGAGAGATGGTGTGGTGGTTTGAATATGCTTGGCCCATGGGAAGTGGCACTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCTCAGACACTCCAGAAGAGGGAGTCAGATCTCATTACGGATGGTTGTGAGCAGTCCACCCACAAAGTaGCACACTTCCTTTAACAAA | + |
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Preference number: 2 (lower is better) Translates to: VLRHSRRGSQISLRMVVSSPPTK*HTSFNK Trigger: TTTGTTAAAGGAAGTGTGTCACTTTGTGGGTGGACT...GCTCACAACCATCCGTAATGAGATCTGACTCCCTCTTCTGGAGTGTCTGAGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR-3UTR CCA 90 bp | AATAGTGCCACTTCCCATGGGCCAAGCATATTCAAACCACCACACCATCTCTCCAATCAAGTGGGCCTATaGAATGTCCTCATGATGGAG | + |
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Preference number: 2 (lower is better) Translates to: NSATSHGPSIFKPPHHLSNQVGL*NVLMME Trigger: CTCCATCATGAGGACATTCCATAGGCCCACTTGATT...GGAGAGATGGTGTGGTGGTTTGAATATGCTTGGCCCATGGGAAGTGGCACTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAATAGACAGGCACACACCTCCATGTGTGGTTATTTGCATAACTCTGAAACCCTGGGATGCAGCCAGTaGCAGAGCACTTGTTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: LNRQAHTSMCGYLHNSETLGCSQ*QSTCLC Trigger: ACACAAACAAGTGCTCTGCCACTGGCTGCATCCCAG...GGTTTCAGAGTTATGCAAATAACCACACATGGAGGTGTGTGCCTGTCTATTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 ENSMUST00000141971.8 ENSMUST00000148966.2 |
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| 3UTR-3UTR GCA 90 bp | CTGAATAGACAGGCACACACCTCCATGTGTGGTTATTTGCATAACTCTGAAACCCAGAGGCAGGAGGGTTaGTACAAACTGTGTAGACTG | + |
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Preference number: 2 (lower is better) Translates to: LNRQAHTSMCGYLHNSETQRQEG*YKLCRL Trigger: CAGTCTACACAGTTTGTAGCAACCCTCCTGCCTCTG...GGTTTCAGAGTTATGCAAATAACCACACATGGAGGTGTGTGCCTGTCTATTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 ENSMUST00000141971.8 ENSMUST00000148966.2 |
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| 3UTR-3UTR GCA 90 bp | TTTAACAAACCACACCTCATAATAGTGCCACTTCCCATGGGCCAAGCATATTCAGCCTGTGTGTCTGCCTaGACAGAAGTTATGCCCCAT | + |
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Preference number: 2 (lower is better) Translates to: FNKPHLIIVPLPMGQAYSACVSA*TEVMPH Trigger: ATGGGGCATAACTTCTGTGCAGGCAGACACACAGGC...TGAATATGCTTGGCCCATGGGAAGTGGCACTATTATGAGGTGTGGTTTGTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR-3UTR CCA 90 bp | AAACCACACCTCATAATAGTGCCACTTCCCATGGGCCAAGCATATTCAAACCACCACCATCTCTCCATGTaGTTCTCACTTCATGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: KPHLIIVPLPMGQAYSNHHHLSM*FSLHAS Trigger: GGAAGCATGAAGTGAGAACCACATGGAGAGATGGTG...GTGGTTTGAATATGCTTGGCCCATGGGAAGTGGCACTATTATGAGGTGTGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR CAA 90 bp | TCAGCATCAATCTTGTCAGGACAAGGACAAATCAATTGTTTAGGGTaGCCCTTTGGCACTGAGGGCTGCTTGAGAATCATCTTTTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: SASILSGQGQINCLG*PFGTEGCLRIIFLG Trigger: GCCCAAAAAGATGATTCTCAAGCAGCCCTCAGTGCCAAAGGGCAACCCTAAACAATTGATTTGTCCTTGTCCTGACAAGATTGATGCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR-3UTR TCA 90 bp | AAACCACACCTCATAATAGTGCCACTTCCCATGGGCCAAGCATATTCAAACCACCATAACTCTGAAACCTaGAGGCTCTGGCTGAGATTA | + |
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Preference number: 2 (lower is better) Translates to: KPHLIIVPLPMGQAYSNHHNSET*RLWLRL Trigger: TAATCTCAGCCAGAGCCTTCAGGTTTCAGAGTTATG...GTGGTTTGAATATGCTTGGCCCATGGGAAGTGGCACTATTATGAGGTGTGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAATAGACAGGCACACACCTCCATGTGTGGTTATTTGCATAACTCTGAAACCAATCAAGTGGGCCTATaGAATGTCCTCATGATGGAG | + |
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Preference number: 2 (lower is better) Translates to: LNRQAHTSMCGYLHNSETNQVGL*NVLMME Trigger: CTCCATCATGAGGACATTCCATAGGCCCACTTGATT...GGTTTCAGAGTTATGCAAATAACCACACATGGAGGTGTGTGCCTGTCTATTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 ENSMUST00000141971.8 ENSMUST00000148966.2 |
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| 3UTR-3UTR TCA 90 bp | TCATTGATAATTTCAAATCAAGTGGGCCTATGGAATGTCCTCATGATGGAGCCCATGAAGAAACAGAACTaGGTCCTAGGAAGGAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: SLIISNQVGLWNVLMMEPMKKQN*VLGRKS Trigger: GGACTTCCTTCCTAGGACTCAGTTCTGTTTCTTCAT...GGGCTCCATCATGAGGACATTCCATAGGCCCACTTGATTTGAAATTATCAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023360.14 ENSMUST00000124947.8 ENSMUST00000128757.8 ENSMUST00000141971.8 ENSMUST00000148966.2 |
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| 3UTR-3UTR TCA 90 bp | ATAAACTCAGAATTCAGTGTTTCACATCTCAAAATTTGTCATGTATGCCAGTGGGCACAGGGACAAGGCTaGAGTTGGTCAGCTGCACAA | + |
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Preference number: 2 (lower is better) Translates to: INSEFSVSHLKICHVCQWAQGQG*SWSAAQ Trigger: TTGTGCAGCTGACCAACTTCAGCCTTGTCCCTGTGC...CCACTGGCATACATGACAAATTTTGAGATGTGAAACACTGAATTCTGAGTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148966.2 |
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| 3UTR-3UTR GCA 90 bp | CATCTTTTTGGGCAGGTAGGAAGGACAAACACACATAGAAAACTGGCGATGGGCCCATGTGTGGTTATTTaGATAACTCTGAAACCTGAA | + |
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Preference number: 2 (lower is better) Translates to: HLFGQVGRTNTHRKLAMGPCVVI*ITLKPE Trigger: TTCAGGTTTCAGAGTTATGCAAATAACCACACATGG...GCCCATCGCCAGTTTTCTATGTGTGTTTGTCCTTCCTACCTGCCCAAAAAGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 ENSMUST00000141971.8 |
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| 3UTR-3UTR CCA 90 bp | AAACCACACCTCATAATAGTGCCACTTCCCATGGGCCAAGCATATTCAAACCACATAAGCCTTTCAGACTaGAATGACTGGGAAAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: KPHLIIVPLPMGQAYSNHISLSD*NDWERF Trigger: AAACCTTTCCCAGTCATTCCAGTCTGAAAGGCTTAT...GTGGTTTGAATATGCTTGGCCCATGGGAAGTGGCACTATTATGAGGTGTGGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGTTCAGCAATTTACAAGTGAAAATACAGGGATATACCTTCATGCCATCCCAATGAAGAAACAGAACTaGGTCCTAGGAAGGAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: RVQQFTSENTGIYLHAIPMKKQN*VLGRKS Trigger: GGACTTCCTTCCTAGGACTCAGTTCTGTTTCTTCAT...TGGGATGGCATGAAGGTATATCCCTGTATTTTCACTTGTAAATTGCTGAACTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 ENSMUST00000141971.8 ENSMUST00000148966.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAATTCAGTGTTTCACATCTCAAAATTTGTCATGTATGCCAGTGGAAGCAACCATAACTCTGAAACCTaGAGGCTCTGGCTGAGATTA | + |
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Preference number: 2 (lower is better) Translates to: QNSVFHISKFVMYASGSNHNSET*RLWLRL Trigger: TAATCTCAGCCAGAGCCTTCAGGTTTCAGAGTTATG...GTTGCTTCCACTGGCATACATGACAAATTTTGAGATGTGAAACACTGAATTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 ENSMUST00000141971.8 ENSMUST00000148966.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCTCTGGCTGAGATTAGGCAAACTAAATAAATGTGAAAGACTAGTTGAGAATATGAAGAAACAGAACTaGGTCCTAGGAAGGAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: RLWLRLGKLNKCERLVENMKKQN*VLGRKS Trigger: GGACTTCCTTCCTAGGACTCAGTTCTGTTTCTTCAT...ATTCTCAACTAGTCTTTCACATTTATTTAGTTTGCCTAATCTCAGCCAGAGCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 ENSMUST00000141971.8 ENSMUST00000148966.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCTCTGGCTGAGATTAGGCAAACTAAATAAATGTGAAAGACTAGTTGAGAATCAAAGGGCCAGTACATaGGACCACTCTTATACGTAT | + |
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Preference number: 2 (lower is better) Translates to: RLWLRLGKLNKCERLVENQRAST*DHSYTY Trigger: ATACGTATAAGAGTGGTCTCATGTACTGGCCCTTTG...ATTCTCAACTAGTCTTTCACATTTATTTAGTTTGCCTAATCTCAGCCAGAGCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148966.2 |
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| 3UTR-3UTR GCA 90 bp | AGCACTTGTTTGTGTAAGGTCCTGGTTCCACTTAAATACCACATATACACACAATCCAAATATTTAGAATaGAGAGGCAGGAGGGTTGCT | + |
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Preference number: 2 (lower is better) Translates to: STCLCKVLVPLKYHIYTQSKYLE*RGRRVA Trigger: AGCAACCCTCCTGCCTCTGCATTCTAAATATTTGGA...TTGTGTGTATATGTGGTATTTAAGTGGAACCAGGACCTTACACAAACAAGTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 ENSMUST00000141971.8 ENSMUST00000148966.2 |
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| 3UTR-3UTR GCA 90 bp | CAGAATTCAGTGTTTCACATCTCAAAATTTGTCATGTATGCCAGTGGAAGCAACTCCAAATATTTAGAATaGAGAGGCAGGAGGGTTGCT | + |
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Preference number: 2 (lower is better) Translates to: QNSVFHISKFVMYASGSNSKYLE*RGRRVA Trigger: AGCAACCCTCCTGCCTCTGCATTCTAAATATTTGGA...GTTGCTTCCACTGGCATACATGACAAATTTTGAGATGTGAAACACTGAATTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 ENSMUST00000141971.8 ENSMUST00000148966.2 |
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| 3UTR CAA 90 bp | CATTCACAAGATAAACTCAGAATTCAGTGTTTCACATCTCAAAATTaGTCATGTATGCCAGTGGAAGCAACAGAACCATGGGGGCAATTT | + |
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Preference number: 2 (lower is better) Translates to: HSQDKLRIQCFTSQN*SCMPVEATEPWGQF Trigger: AAATTGCCCCCATGGTTCTGTTGCTTCCACTGGCATACATGACAAATTTTGAGATGTGAAACACTGAATTCTGAGTTTATCTTGTGAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 ENSMUST00000141971.8 ENSMUST00000148966.2 |
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| 3UTR CAA 90 bp | TTATACAAAAAGTCACATTACAGTCTGAACCAATCAGCATCAATCTaGTCAGGACAAGGACAAATCAATTGTTTAGGGTTGCCCTTTGGC | + |
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Preference number: 2 (lower is better) Translates to: LYKKSHYSLNQSASI*SGQGQINCLGLPFG Trigger: GCCAAAGGGCAACCCTAAACAATTGATTTGTCCTTGTCCTGACAAGATTGATGCTGATTGGTTCAGACTGTAATGTGACTTTTTGTATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCTCTGGCTGAGATTAGGCAAACTAAATAAATGTGAAAGACTAGTTGAGAATTCCAAATATTTAGAATaGAGAGGCAGGAGGGTTGCT | + |
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Preference number: 2 (lower is better) Translates to: RLWLRLGKLNKCERLVENSKYLE*RGRRVA Trigger: AGCAACCCTCCTGCCTCTGCATTCTAAATATTTGGA...ATTCTCAACTAGTCTTTCACATTTATTTAGTTTGCCTAATCTCAGCCAGAGCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 ENSMUST00000141971.8 ENSMUST00000148966.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAATTCAGTGTTTCACATCTCAAAATTTGTCATGTATGCCAGTGGAAGCAACATAAGCCTTTCAGACTaGAATGACTGGGAAAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: QNSVFHISKFVMYASGSNISLSD*NDWERF Trigger: AAACCTTTCCCAGTCATTCCAGTCTGAAAGGCTTAT...GTTGCTTCCACTGGCATACATGACAAATTTTGAGATGTGAAACACTGAATTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 ENSMUST00000141971.8 ENSMUST00000148966.2 |
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| 3UTR-3UTR CCA 90 bp | TTTAACAAACCACACCTCATAATAGTGCCACTTCCCATGGGCCAAGCATATTCAATAGAAAACTGGCGATaGGCCATAAAAATGACAATA | + |
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Preference number: 2 (lower is better) Translates to: FNKPHLIIVPLPMGQAYSIENWR*AIKMTI Trigger: TATTGTCATTTTTATGGCCCATCGCCAGTTTTCTAT...TGAATATGCTTGGCCCATGGGAAGTGGCACTATTATGAGGTGTGGTTTGTTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGTTCAGCAATTTACAAGTGAAAATACAGGGATATACCTTCATGCCATCCCACCATGTGTGGTTATTTaGATAACTCTGAAACCTGAA | + |
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Preference number: 2 (lower is better) Translates to: RVQQFTSENTGIYLHAIPPCVVI*ITLKPE Trigger: TTCAGGTTTCAGAGTTATGCAAATAACCACACATGG...TGGGATGGCATGAAGGTATATCCCTGTATTTTCACTTGTAAATTGCTGAACTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 ENSMUST00000141971.8 ENSMUST00000148966.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCTCTGGCTGAGATTAGGCAAACTAAATAAATGTGAAAGACTAGTTGAGAATATAAGCCTTTCAGACTaGAATGACTGGGAAAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: RLWLRLGKLNKCERLVENISLSD*NDWERF Trigger: AAACCTTTCCCAGTCATTCCAGTCTGAAAGGCTTAT...ATTCTCAACTAGTCTTTCACATTTATTTAGTTTGCCTAATCTCAGCCAGAGCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 ENSMUST00000141971.8 ENSMUST00000148966.2 |
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| 3UTR-3UTR GCA 90 bp | ATAAACTCAGAATTCAGTGTTTCACATCTCAAAATTTGTCATGTATGCCAGTGGCCATGTGTGGTTATTTaGATAACTCTGAAACCTGAA | + |
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Preference number: 2 (lower is better) Translates to: INSEFSVSHLKICHVCQWPCVVI*ITLKPE Trigger: TTCAGGTTTCAGAGTTATGCAAATAACCACACATGG...CCACTGGCATACATGACAAATTTTGAGATGTGAAACACTGAATTCTGAGTTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 ENSMUST00000141971.8 ENSMUST00000148966.2 |
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| 3UTR-3UTR CAA 90 bp | AGGCAACCAGGAGGAGGGTCTCTCCTTACAGGGCAGAGCTTGAGTGAGCATAGGCCTCCTTCCTCACTTTaGCCTCCTTCTAAACCCTCC | + |
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Preference number: 3 (lower is better) Translates to: RQPGGGSLLTGQSLSEHRPPSSL*PPSKPS Trigger: GGAGGGTTTAGAAGGAGGCAAAAGTGAGGAAGGAGG...CCTATGCTCACTCAAGCTCTGCCCTGTAAGGAGAGACCCTCCTCCTGGTTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR CCA 72 bp | CTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCCGGACCTTCGGAAGAGCAGTCG | + |
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Preference number: 3 (lower is better) Translates to: LITDGCEPPCGC*DLNSGPSEEQS Trigger: CGACTGCTCTTCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR TCA 72 bp | CCAGAAGAGGGAGTCAGATCTCATTACGGATGGTTGTaGGCCACCATGTGGTTGCTGGGATTTGAACTCCGG | + |
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Preference number: 3 (lower is better) Translates to: PEEGVRSHYGWL*ATMWLLGFELR Trigger: CCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATCTGACTCCCTCTTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR GCA 72 bp | CCTCCTTCTAAACCCTCCTCATCTGTCCTTGTCTCCTaGATCTCTGCCTGTGTGTCTGCCTGCACAGAAGTT | + |
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Preference number: 3 (lower is better) Translates to: PPSKPSSSVLVS*ISACVSACTEV Trigger: AACTTCTGTGCAGGCAGACACACAGGCAGAGATGCAGGAGACAAGGACAGATGAGGAGGGTTTAGAAGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR GCA 72 bp | GATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCCGGACCTTCGGAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: DLITDGCEPPCG*WDLNSGPSEEQ Trigger: CTGCTCTTCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR TCA 72 bp | ACTGAGCCATCTCACCAGCCCGAGAGTTCTGCATCTTaGTCTGAAGACAGACAGAAGGGGATTCTCTTCCAC | + |
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Preference number: 3 (lower is better) Translates to: TEPSHQPESSAS*SEDRQKGILFH Trigger: GTGGAAGAGAATCCCCTTCTGTCTGTCTTCAGATCAAGATGCAGAACTCTCGGGCTGGTGAGATGGCTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR-3UTR CAA 90 bp | TACACTGTAGCTGTCCTCAGACACTCCAGAAGAGGGAGTCAGATCTCATTACGGATCAATTGTTTAGGGTaGCCCTTTGGCACTGAGGGC | + |
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Preference number: 3 (lower is better) Translates to: YTVAVLRHSRRGSQISLRINCLG*PFGTEG Trigger: GCCCTCAGTGCCAAAGGGCAACCCTAAACAATTGAT...CCGTAATGAGATCTGACTCCCTCTTCTGGAGTGTCTGAGGACAGCTACAGTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR CCA 72 bp | CCAAGCATATTCAAACCACCACACCATCTCTCCATGTaGTTCTCACTTCATGCTTCCTGCTCCATCCATCCC | + |
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Preference number: 3 (lower is better) Translates to: PSIFKPPHHLSM*FSLHASCSIHP Trigger: GGGATGGATGGAGCAGGAAGCATGAAGTGAGAACCACATGGAGAGATGGTGTGGTGGTTTGAATATGCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR CCA 72 bp | CAAGTTCATAGGTTCAGTTCATTAAGGCAGGAAACATaGCAGCATGCAGGCAGACATCGTGCTGGAGAAGGA | + |
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Preference number: 3 (lower is better) Translates to: QVHRFSSLRQET*QHAGRHRAGEG Trigger: TCCTTCTCCAGCACGATGTCTGCCTGCATGCTGCCATGTTTCCTGCCTTAATGAACTGAACCTATGAACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128757.8 |
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| 3UTR-3UTR CAA 90 bp | TTTAACAAACCACACCTCATAATAGTGCCACTTCCCATGGGCCAAGCATATTCACCTCCTTCCTCACTTTaGCCTCCTTCTAAACCCTCC | + |
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Preference number: 3 (lower is better) Translates to: FNKPHLIIVPLPMGQAYSPPSSL*PPSKPS Trigger: GGAGGGTTTAGAAGGAGGCAAAAGTGAGGAAGGAGG...TGAATATGCTTGGCCCATGGGAAGTGGCACTATTATGAGGTGTGGTTTGTTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR-3UTR CAA 90 bp | GGAATAAGGGCATTTGGTCAACTGTATCTTCTCAAAGCTAGAAGACATCAATTTGGGACAAGGCTGAAGTaGGTCAGCTGCACAAAGGGC | + |
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Preference number: 3 (lower is better) Translates to: GIRAFGQLYLLKARRHQFGTRLK*VSCTKG Trigger: GCCCTTTGTGCAGCTGACCAACTTCAGCCTTGTCCC...AAATTGATGTCTTCTAGCTTTGAGAAGATACAGTTGACCAAATGCCCTTATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148966.2 |
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| 3UTR TCA 72 bp | AGGACAAATCAATTGTTTAGGGTTGCCCTTTGGCACTaGGGGCTGCTTGAGAATCATCTTTTTGGGCAGGTA | + |
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Preference number: 3 (lower is better) Translates to: RTNQLFRVALWH*GLLENHLFGQV Trigger: TACCTGCCCAAAAAGATGATTCTCAAGCAGCCCTCAGTGCCAAAGGGCAACCCTAAACAATTGATTTGTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 ENSMUST00000141971.8 |
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| 3UTR-3UTR CAA 90 bp | AAACCACACCTCATAATAGTGCCACTTCCCATGGGCCAAGCATATTCAAACCACTTCACATCTCAAAATTaGTCATGTATGCCAGTGGAA | + |
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Preference number: 3 (lower is better) Translates to: KPHLIIVPLPMGQAYSNHFTSQN*SCMPVE Trigger: TTCCACTGGCATACATGACAAATTTTGAGATGTGAA...GTGGTTTGAATATGCTTGGCCCATGGGAAGTGGCACTATTATGAGGTGTGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| 3UTR TCA 72 bp | ACCTCCATGTGTGGTTATTTGCATAACTCTGAAACCTaGAGGCTCTGGCTGAGATTAGGCAAACTAAATAAA | + |
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Preference number: 3 (lower is better) Translates to: TSMCGYLHNSET*RLWLRLGKLNK Trigger: TTTATTTAGTTTGCCTAATCTCAGCCAGAGCCTTCAGGTTTCAGAGTTATGCAAATAACCACACATGGAGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 ENSMUST00000141971.8 ENSMUST00000148966.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGTTCAGCAATTTACAAGTGAAAATACAGGGATATACCTTCATGCCATCCCATTCACATCTCAAAATTaGTCATGTATGCCAGTGGAA | + |
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Preference number: 3 (lower is better) Translates to: RVQQFTSENTGIYLHAIPFTSQN*SCMPVE Trigger: TTCCACTGGCATACATGACAAATTTTGAGATGTGAA...TGGGATGGCATGAAGGTATATCCCTGTATTTTCACTTGTAAATTGCTGAACTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 ENSMUST00000141971.8 ENSMUST00000148966.2 |
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| 3UTR TCA 72 bp | TCAGCTCATTATTATACAAAAAGTCACATTACAGTCTaGACCAATCAGCATCAATCTTGTCAGGACAAGGAC | + |
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Preference number: 3 (lower is better) Translates to: SAHYYTKSHITV*TNQHQSCQDKD Trigger: GTCCTTGTCCTGACAAGATTGATGCTGATTGGTTCAGACTGTAATGTGACTTTTTGTATAATAATGAGCTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| CDS-3UTR GCA 90 bp | CTGCCAGTGATTGAGACCGATGAAGAAACAGAACTGAGTCCTAGGAAGGAAGTCCATGCCTGCCCCGGGTaGCCTCAGGGCCTGCACACC | + |
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Preference number: 4 (lower is better) Translates to: LPVIETDEETELSPRKEVHACPG*PQGLHT Trigger: GGTGTGCAGGCCCTGAGGGCACCCGGGGCAGGCATG...GACTTCCTTCCTAGGACTCAGTTCTGTTTCTTCATCGGTCTCAATCACTGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141971.8 |
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| CDS-3UTR CCA 90 bp | CTGAATAGACAGGCACACACCTCCATGTGTGGTTATTTGCATAACTCTGAAACCGCCACGCGACGCGTCTaGCGCCAGTCGGCTGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: LNRQAHTSMCGYLHNSETATRRV*RQSAGP Trigger: AGGCCCAGCCGACTGGCGCCAGACGCGTCGCGTGGC...GGTTTCAGAGTTATGCAAATAACCACACATGGAGGTGTGTGCCTGTCTATTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000148966.2 |
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| 3UTR CAA 72 bp | ACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCCGGACCTTCGGAAGAGCAGTCGGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NSGPSEEQSGA Trigger: AGCACCCGACTGCTCTTCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| CDS-3UTR TCA 90 bp | GAAGCAGGCCTGCTGCCAGTGATTGAGACCGATGAAGAAACAGAACTGAGTCCTGCACAGGGACAAGGCTaGAGTTGGTCAGCTGCACAA | + |
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Preference number: 4 (lower is better) Translates to: EAGLLPVIETDEETELSPAQGQG*SWSAAQ Trigger: TTGTGCAGCTGACCAACTTCAGCCTTGTCCCTGTGC...AGGACTCAGTTCTGTTTCTTCATCGGTCTCAATCACTGGCAGCAGGCCTGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023360.14 ENSMUST00000124947.8 ENSMUST00000128757.8 ENSMUST00000141971.8 |
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| CDS-3UTR CCA 90 bp | AGGCTCTGGCTGAGATTAGGCAAACTAAATAAATGTGAAAGACTAGTTGAGAATGCCACGCGACGCGTCTaGCGCCAGTCGGCTGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: RLWLRLGKLNKCERLVENATRRV*RQSAGP Trigger: AGGCCCAGCCGACTGGCGCCAGACGCGTCGCGTGGC...ATTCTCAACTAGTCTTTCACATTTATTTAGTTTGCCTAATCTCAGCCAGAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000148966.2 |
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| CDS-3UTR GCA 90 bp | AGGCTCTGGCTGAGATTAGGCAAACTAAATAAATGTGAAAGACTAGTTGAGAATGAGAACGCTCATGCCTaGCCCGGGTGCCCTCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: RLWLRLGKLNKCERLVENENAHA*PGCPQG Trigger: GCCCTGAGGGCACCCGGGGCAGGCATGAGCGTTCTC...ATTCTCAACTAGTCTTTCACATTTATTTAGTTTGCCTAATCTCAGCCAGAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141971.8 |
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| 3UTR CAA 72 bp | ATCTTGTCAGGACAAGGACAAATCAATTGTTTAGGGTaGCCCTTTGGCACTGAGGGCTGCTTGAGAATCATC | + |
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Preference number: 4 (lower is better) Translates to: ILSGQGQINCLG*PFGTEGCLRII Trigger: GATGATTCTCAAGCAGCCCTCAGTGCCAAAGGGCAACCCTAAACAATTGATTTGTCCTTGTCCTGACAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 |
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| CDS-3UTR TCA 90 bp | TCATTGATAATTTCAAATCAAGTGGGCCTATGGAATGTCCTCATGATGGAGCCCCAAAGGGCCAGTACATaGGACCACTCTTATACGTAT | + |
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Preference number: 4 (lower is better) Translates to: SLIISNQVGLWNVLMMEPQRAST*DHSYTY Trigger: ATACGTATAAGAGTGGTCTCATGTACTGGCCCTTTG...GGGCTCCATCATGAGGACATTCCATAGGCCCACTTGATTTGAAATTATCAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023360.14 ENSMUST00000124947.8 ENSMUST00000128757.8 ENSMUST00000141971.8 |
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| CDS-3UTR TCA 90 bp | ATCATTGATAATTTCAAATCAAGTGGGCCTATGGAATGTCCTCATGATGGAGCCCAAAGGGCCAGTACATaGGACCACTCTTATACGTAT | + |
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Preference number: 4 (lower is better) Translates to: IIDNFKSSGPMECPHDGAQRAST*DHSYTY Trigger: ATACGTATAAGAGTGGTCTCATGTACTGGCCCTTTG...GGCTCCATCATGAGGACATTCCATAGGCCCACTTGATTTGAAATTATCAATGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023360.14 ENSMUST00000124947.8 ENSMUST00000128757.8 ENSMUST00000141971.8 |
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| CDS-3UTR TCA 90 bp | AGAGTTCAGCAATTTACAAGTGAAAATACAGGGATATACCTTCATGCCATCCCACAAAGGGCCAGTACATaGGACCACTCTTATACGTAT | + |
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Preference number: 4 (lower is better) Translates to: RVQQFTSENTGIYLHAIPQRAST*DHSYTY Trigger: ATACGTATAAGAGTGGTCTCATGTACTGGCCCTTTG...TGGGATGGCATGAAGGTATATCCCTGTATTTTCACTTGTAAATTGCTGAACTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 ENSMUST00000141971.8 |
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| CDS-3UTR TCA 90 bp | CAGCAATTTACAAGTGAAAATACAGGGATATACCTTCATGCCATCCCAACAATTCAAAGGGCCAGTACATaGGACCACTCTTATACGTAT | + |
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Preference number: 4 (lower is better) Translates to: QQFTSENTGIYLHAIPTIQRAST*DHSYTY Trigger: ATACGTATAAGAGTGGTCTCATGTACTGGCCCTTTG...AATTGTTGGGATGGCATGAAGGTATATCCCTGTATTTTCACTTGTAAATTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 ENSMUST00000141971.8 |
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| 3UTR CAA 72 bp | GATAAACTCAGAATTCAGTGTTTCACATCTCAAAATTaGTCATGTATGCCAGTGGAAGCAACAGAACCATGG | + |
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Preference number: 4 (lower is better) Translates to: DKLRIQCFTSQN*SCMPVEATEPW Trigger: CCATGGTTCTGTTGCTTCCACTGGCATACATGACAAATTTTGAGATGTGAAACACTGAATTCTGAGTTTATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 ENSMUST00000141971.8 ENSMUST00000148966.2 |
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| CDS-3UTR CAA 90 bp | GAAGCAGGCCTGCTGCCAGTGATTGAGACCGATGAAGAAACAGAACTGAGTCCTGGGACAAGGCTGAAGTaGGTCAGCTGCACAAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: EAGLLPVIETDEETELSPGTRLK*VSCTKG Trigger: GCCCTTTGTGCAGCTGACCAACTTCAGCCTTGTCCC...AGGACTCAGTTCTGTTTCTTCATCGGTCTCAATCACTGGCAGCAGGCCTGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023360.14 ENSMUST00000124947.8 ENSMUST00000128757.8 ENSMUST00000141971.8 |
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| CDS-3UTR CAA 90 bp | CATCTTTTTGGGCAGGTAGGAAGGACAAACACACATAGAAAACTGGCGATGGGCGGGACAAGGCTGAAGTaGGTCAGCTGCACAAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: HLFGQVGRTNTHRKLAMGGTRLK*VSCTKG Trigger: GCCCTTTGTGCAGCTGACCAACTTCAGCCTTGTCCC...GCCCATCGCCAGTTTTCTATGTGTGTTTGTCCTTCCTACCTGCCCAAAAAGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 ENSMUST00000141971.8 |
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| CDS-3UTR CAA 90 bp | TCATTGATAATTTCAAATCAAGTGGGCCTATGGAATGTCCTCATGATGGAGCCCGGGACAAGGCTGAAGTaGGTCAGCTGCACAAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: SLIISNQVGLWNVLMMEPGTRLK*VSCTKG Trigger: GCCCTTTGTGCAGCTGACCAACTTCAGCCTTGTCCC...GGGCTCCATCATGAGGACATTCCATAGGCCCACTTGATTTGAAATTATCAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023360.14 ENSMUST00000124947.8 ENSMUST00000128757.8 ENSMUST00000141971.8 |
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| CDS-3UTR CAA 90 bp | CAGCAATTTACAAGTGAAAATACAGGGATATACCTTCATGCCATCCCAACAATTGGGACAAGGCTGAAGTaGGTCAGCTGCACAAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: QQFTSENTGIYLHAIPTIGTRLK*VSCTKG Trigger: GCCCTTTGTGCAGCTGACCAACTTCAGCCTTGTCCC...AATTGTTGGGATGGCATGAAGGTATATCCCTGTATTTTCACTTGTAAATTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023360.14 ENSMUST00000128757.8 ENSMUST00000141971.8 |
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