Pregenerated sensors for MPV17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000107283Ensembl transcript IDs: ENSMUST00000154241.8, ENSMUST00000200744.4, ENSMUST00000200833.4, ENSMUST00000200864.4, ENSMUST00000201171.4, ENSMUST00000201353.4, ENSMUST00000201491.2, ENSMUST00000202241.4
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAGGCACTGTCCCTGCAGATGAGCCACCAAACGTGGAACTCAGGTaGGACAGAAACAAGGTTTGTGGGAGCAGAAGCCTCTCAAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: PGTVPADEPPNVELR*DRNKVCGSRSLSRE Trigger: CTCCCTTGAGAGGCTTCTGCTCCCACAAACCTTGTTTCTGTCTCACCTGAGTTCCACGTTTGGTGGCTCATCTGCAGGGACAGTGCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201491.2 |
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| 3UTR GCA 90 bp | AGGGCATCAGACCCCATTACAGATGGTTGTGAGCCACCATGTGATTaGTGGGACTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: RASDPITDGCEPPCD*WDLNSGPLEEQSVL Trigger: GAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAGTCCCAGCAATCACATGGTGGCTCACAACCATCTGTAATGGGGTCTGATGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 |
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| 3UTR TCA 90 bp | ATCTCTTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCAGGAGCTTCTGAAGAGCAGTCAGTGCTCTTACAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: ISLQMVVSHHVVAGI*TQELLKSSQCSYRL Trigger: CAGCCTGTAAGAGCACTGACTGCTCTTCAGAAGCTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAAAGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 |
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| 3UTR CCA 90 bp | CCACTTCAGAGTGGTCACCCTATTCTGATCAGCAACCCCATAGCATaGAAGCTGACACACTCCTTCCTTTTAAAGATTTCATTGTGTGCT | + |
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Preference number: 1 (lower is better) Translates to: PLQSGHPILISNPIA*KLTHSFLLKISLCA Trigger: AGCACACAATGAAATCTTTAAAAGGAAGGAGTGTGTCAGCTTCCATGCTATGGGGTTGCTGATCAGAATAGGGTGACCACTCTGAAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 |
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| 3UTR TCA 90 bp | CCCAAGACACAATTCTCTAATCCAGCATTTGAGAAGCTGAGAAGCTaGGGCAGGATTGTCACTAGGTTGAGACTGACACAGACTTTCATT | + |
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Preference number: 1 (lower is better) Translates to: PKTQFSNPAFEKLRS*GRIVTRLRLTQTFI Trigger: AATGAAAGTCTGTGTCAGTCTCAACCTAGTGACAATCCTGCCTCAGCTTCTCAGCTTCTCAAATGCTGGATTAGAGAATTGTGTCTTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 |
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| 3UTR GCA 90 bp | AGCATGGAAGCTGACACACTCCTTCCTTTTAAAGATTTCATTGTGTaGTTAATTACAAATGCGTGTCTATTCGTGGGTATATACATGTTT | + |
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Preference number: 1 (lower is better) Translates to: SMEADTLLPFKDFIV*LITNACLFVGIYMF Trigger: AAACATGTATATACCCACGAATAGACACGCATTTGTAATTAAGCACACAATGAAATCTTTAAAAGGAAGGAGTGTGTCAGCTTCCATGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 |
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| 3UTR-3UTR TCA 90 bp | CATCTCTCCAGCCCCCAGGACACAATTCTTATAGTGTGTCCCCATCAGCTAAGGAGACATAGGGAGTTGTaGGCCACCCGATGTGGGTGC | + |
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Preference number: 2 (lower is better) Translates to: HLSSPQDTILIVCPHQLRRHREL*ATRCGC Trigger: GCACCCACATCGGGTGGCTCACAACTCCCTATGTCT...CCTTAGCTGATGGGGACACACTATAAGAATTGTGTCCTGGGGGCTGGAGAGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 |
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| 3UTR-3UTR GCA 90 bp | GCTGTCTTCAGACACACCAGAAGAGGGCATCAGACCCCATTACAGATGGTTGTGAGGCATGTACCACCATaGCTGGCTTCCAGGACACAA | + |
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Preference number: 2 (lower is better) Translates to: AVFRHTRRGHQTPLQMVVRHVPP*LASRTQ Trigger: TTGTGTCCTGGAAGCCAGGCATGGTGGTACATGCCT...CACAACCATCTGTAATGGGGTCTGATGCCCTCTTCTGGTGTGTCTGAAGACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 |
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| 3UTR-3UTR TCA 90 bp | CTATTCGTGGGTATATACATGTTTGTGCAGGTGCTTCAGAGGCCAGAAGAGAACAGACATAGGGAGTTGTaGGCCACCCGATGTGGGTGC | + |
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Preference number: 2 (lower is better) Translates to: LFVGIYMFVQVLQRPEENRHREL*ATRCGC Trigger: GCACCCACATCGGGTGGCTCACAACTCCCTATGTCT...GTTCTCTTCTGGCCTCTGAAGCACCTGCACAAACATGTATATACCCACGAATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000202241.4 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAACAAGGTTTGTGGGAGCAGAAGCCTCTCAAGGGAGCTGGCACGTCAGCAGGTCAAGGTTGGGATaGCTACCATTTTCTCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: TETRFVGAEASQGSWHVSRSRLG*LPFSLQ Trigger: TTGGAGAGAAAATGGTAGCCATCCCAACCTTGACCT...GCTGACGTGCCAGCTCCCTTGAGAGGCTTCTGCTCCCACAAACCTTGTTTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201491.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGTATATACATGTTTGTGCAGGTGCTTCAGAGGCCAGAAGAGAACATCAGATAGACATAGGGAGTTGTaGGCCACCCGATGTGGGTGC | + |
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Preference number: 2 (lower is better) Translates to: WVYTCLCRCFRGQKRTSDRHREL*ATRCGC Trigger: GCACCCACATCGGGTGGCTCACAACTCCCTATGTCT...ATCTGATGTTCTCTTCTGGCCTCTGAAGCACCTGCACAAACATGTATATACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| 3UTR CAA 90 bp | GATCTCTTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCAGGAGCTTCTGAAGAGCAGTCAGTGCTCTTACAGGCT | + |
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Preference number: 2 (lower is better) Translates to: DLFTDGCEPPCGCWD*NSGASEEQSVLLQA Trigger: AGCCTGTAAGAGCACTGACTGCTCTTCAGAAGCTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAAAGAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 |
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| 3UTR-3UTR GCA 90 bp | TGTGGTTGCTGGGATTTGAACTCAGGAGCTTCTGAAGAGCAGTCAGTGCTCTTAATTCCAGGGTCACGGTaGATCAGTACAAGGTGCAAA | + |
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Preference number: 2 (lower is better) Translates to: CGCWDLNSGASEEQSVLLIPGSR*ISTRCK Trigger: TTTGCACCTTGTACTGATGCACCGTGACCCTGGAAT...TAAGAGCACTGACTGCTCTTCAGAAGCTCCTGAGTTCAAATCCCAGCAACCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 |
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| 3UTR-3UTR GCA 90 bp | GATCTCTTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAACATGTTTGTGCAGGTaGTTCAGAGGCCAGAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: DLFTDGCEPPCGCWDLNSTCLCR*FRGQKR Trigger: TCTCTTCTGGCCTCTGAAGCACCTGCACAAACATGT...TGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAAAGAGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 |
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| 3UTR-3UTR CCA 90 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGAGCTTCTATGCGTGTCTATTCGTaGGTATATACATGTTTGTGC | + |
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Preference number: 2 (lower is better) Translates to: TDGCEPPCGCWDLNSGASMRVYS*VYTCLC Trigger: GCACAAACATGTATATACCCACGAATAGACACGCAT...AGAAGCTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 |
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| 3UTR-3UTR TCA 90 bp | TTATTTAATGTATATGAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCAGCATTTGAGAAGCTaGGAAGCTGAGGCAGGATTG | + |
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Preference number: 2 (lower is better) Translates to: LFNVYEYTVAVFRHTRRGQHLRS*EAEAGL Trigger: CAATCCTGCCTCAGCTTCTCAGCTTCTCAAATGCTG...CCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTCATATACATTAAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 |
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| 3UTR TCA 72 bp | CACAGTGAGCCAACCCATAAGGCTCCTCCTTGGCCCTaGGTCTCTAACTTAGGCTGCCAACGTACCACAGCC | + |
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Preference number: 3 (lower is better) Translates to: HSEPTHKAPPWP*VSNLGCQRTTA Trigger: GGCTGTGGTACGTTGGCAGCCTAAGTTAGAGACTCAGGGCCAAGGAGGAGCCTTATGGGTTGGCTCACTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201491.2 |
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| 3UTR TCA 72 bp | GCAGAAGCCTCTCAAGGGAGCTGGCACGTCAGCCAGTaGCACTCTAAGATGGTGTCCGTAAAGGCTCAAAGC | + |
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Preference number: 3 (lower is better) Translates to: AEASQGSWHVSQ*HSKMVSVKAQS Trigger: GCTTTGAGCCTTTACGGACACCATCTTAGAGTGTCACTGGCTGACGTGCCAGCTCCCTTGAGAGGCTTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201491.2 |
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| 3UTR TCA 72 bp | GTCCCTGCAGATGAGCCACCAAACGTGGAACTCAGGTaGGACAGAAACAAGGTTTGTGGGAGCAGAAGCCTC | + |
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Preference number: 3 (lower is better) Translates to: VPADEPPNVELR*DRNKVCGSRSL Trigger: GAGGCTTCTGCTCCCACAAACCTTGTTTCTGTCTCACCTGAGTTCCACGTTTGGTGGCTCATCTGCAGGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201491.2 |
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| 3UTR CCA 72 bp | AGCCAGGCACTGTCCCTGCAGATGAGCCACCAAACGTaGAACTCAGGTGAGACAGAAACAAGGTTTGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: SQALSLQMSHQT*NSGETETRFVG Trigger: TCCCACAAACCTTGTTTCTGTCTCACCTGAGTTCCACGTTTGGTGGCTCATCTGCAGGGACAGTGCCTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201491.2 |
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| 3UTR TCA 72 bp | CAGATGGTTGTGAGCCACCATGTGATTGCTGGGACTTaGACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: QMVVSHHVIAGT*TQDLWKSSQCS Trigger: AGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAGTCCCAGCAATCACATGGTGGCTCACAACCATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 |
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| 3UTR GCA 72 bp | GACCCCATTACAGATGGTTGTGAGCCACCATGTGATTaGTGGGACTTGAACTCAGGACCTCTGGAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: DPITDGCEPPCD*WDLNSGPLEEQ Trigger: CTGCTCTTCCAGAGGTCCTGAGTTCAAGTCCCAGCAATCACATGGTGGCTCACAACCATCTGTAATGGGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 |
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| 3UTR CCA 72 bp | AAACGTGGAACTCAGGTGAGACAGAAACAAGGTTTGTaGGAGCAGAAGCCTCTCAAGGGAGCTGGCACGTCA | + |
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Preference number: 3 (lower is better) Translates to: KRGTQVRQKQGL*EQKPLKGAGTS Trigger: TGACGTGCCAGCTCCCTTGAGAGGCTTCTGCTCCCACAAACCTTGTTTCTGTCTCACCTGAGTTCCACGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201491.2 |
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| 3UTR-3UTR CAA 90 bp | ACAAAAGCATCCTCCACAGTGAGCCAACCCATAAGGCTCCTCCTTGGCCCTGAGTACAGTAGGTCAAGGTaGGGATGGCTACCATTTTCT | + |
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Preference number: 3 (lower is better) Translates to: TKASSTVSQPIRLLLGPEYSRSR*GWLPFS Trigger: AGAAAATGGTAGCCATCCCAACCTTGACCTACTGTA...CTCAGGGCCAAGGAGGAGCCTTATGGGTTGGCTCACTGTGGAGGATGCTTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201491.2 |
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| 3UTR CCA 72 bp | CCCATTACAGATGGTTGTGAGCCACCATGTGATTGCTaGGACTTGAACTCAGGACCTCTGGAAGAGCAGTCA | + |
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Preference number: 3 (lower is better) Translates to: PITDGCEPPCDC*DLNSGPLEEQS Trigger: TGACTGCTCTTCCAGAGGTCCTGAGTTCAAGTCCCAGCAATCACATGGTGGCTCACAACCATCTGTAATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 |
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| 3UTR-3UTR CAA 90 bp | CATCTCTCCAGCCCCCAGGACACAATTCTTATAGTGTGTCCCCATCAGCTAAGGCCTGATGTGGTTAGTTaGAAGAAGCTGTCCAAGCAT | + |
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Preference number: 3 (lower is better) Translates to: HLSSPQDTILIVCPHQLRPDVVS*KKLSKH Trigger: ATGCTTGGACAGCTTCTTCAAACTAACCACATCAGG...CCTTAGCTGATGGGGACACACTATAAGAATTGTGTCCTGGGGGCTGGAGAGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 |
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| 3UTR-3UTR CAA 90 bp | TGTGATTGCTGGGACTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTATGGGTATATACATGTTaGTGCAGGTGCTTCAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: CDCWDLNSGPLEEQSVLLWVYTC*CRCFRG Trigger: GCCTCTGAAGCACCTGCACAAACATGTATATACCCA...TAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAGTCCCAGCAATCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 |
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| 3UTR-3UTR CAA 90 bp | CTATTCGTGGGTATATACATGTTTGTGCAGGTGCTTCAGAGGCCAGAAGAGAACCCTGATGTGGTTAGTTaGAAGAAGCTGTCCAAGCAT | + |
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Preference number: 3 (lower is better) Translates to: LFVGIYMFVQVLQRPEENPDVVS*KKLSKH Trigger: ATGCTTGGACAGCTTCTTCAAACTAACCACATCAGG...GTTCTCTTCTGGCCTCTGAAGCACCTGCACAAACATGTATATACCCACGAATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000202241.4 |
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| 3UTR-3UTR CAA 90 bp | GTCTATTCGTGGGTATATACATGTTTGTGCAGGTGCTTCAGAGGCCAGAAGAGACCTGATGTGGTTAGTTaGAAGAAGCTGTCCAAGCAT | + |
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Preference number: 3 (lower is better) Translates to: VYSWVYTCLCRCFRGQKRPDVVS*KKLSKH Trigger: ATGCTTGGACAGCTTCTTCAAACTAACCACATCAGG...TCTCTTCTGGCCTCTGAAGCACCTGCACAAACATGTATATACCCACGAATAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000202241.4 |
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| 3UTR TCA 72 bp | CAATTCTCTAATCCAGCATTTGAGAAGCTGAGAAGCTaGGGCAGGATTGTCACTAGGTTGAGACTGACACAG | + |
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Preference number: 3 (lower is better) Translates to: QFSNPAFEKLRS*GRIVTRLRLTQ Trigger: CTGTGTCAGTCTCAACCTAGTGACAATCCTGCCTCAGCTTCTCAGCTTCTCAAATGCTGGATTAGAGAATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 |
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| 3UTR GCA 72 bp | CAAATGCGTGTCTATTCGTGGGTATATACATGTTTGTaGAGGTGCTTCAGAGGCCAGAAGAGAACATCAGAT | + |
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Preference number: 3 (lower is better) Translates to: QMRVYSWVYTCL*RCFRGQKRTSD Trigger: ATCTGATGTTCTCTTCTGGCCTCTGAAGCACCTGCACAAACATGTATATACCCACGAATAGACACGCATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000202241.4 |
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| 3UTR CCA 72 bp | AGTGGTCACCCTATTCTGATCAGCAACCCCATAGCATaGAAGCTGACACACTCCTTCCTTTTAAAGATTTCA | + |
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Preference number: 3 (lower is better) Translates to: SGHPILISNPIA*KLTHSFLLKIS Trigger: TGAAATCTTTAAAAGGAAGGAGTGTGTCAGCTTCCATGCTATGGGGTTGCTGATCAGAATAGGGTGACCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 |
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| 3UTR-3UTR CAA 90 bp | TTATTTAATGTATATGAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCCTGATGTGGTTAGTTaGAAGAAGCTGTCCAAGCAT | + |
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Preference number: 3 (lower is better) Translates to: LFNVYEYTVAVFRHTRRGPDVVS*KKLSKH Trigger: ATGCTTGGACAGCTTCTTCAAACTAACCACATCAGG...CCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTCATATACATTAAATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 |
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| 3UTR GCA 72 bp | GCTGACACACTCCTTCCTTTTAAAGATTTCATTGTGTaGTTAATTACAAATGCGTGTCTATTCGTGGGTATA | + |
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Preference number: 3 (lower is better) Translates to: ADTLLPFKDFIV*LITNACLFVGI Trigger: TATACCCACGAATAGACACGCATTTGTAATTAAGCACACAATGAAATCTTTAAAAGGAAGGAGTGTGTCAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 |
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| CDS-3UTR GCA 90 bp | GGTGAGACAGAAACAAGGTTTGTGGGAGCAGAAGCCTCTCAAGGGAGCTGGCACCGGCCTGCCTGGTGTTaGTGGAGACCCCGCCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: GETETRFVGAEASQGSWHRPAWC*WRPRLS Trigger: GGAGAGGCGGGGTCTCCAGCAACACCAGGCAGGCCG...GTGCCAGCTCCCTTGAGAGGCTTCTGCTCCCACAAACCTTGTTTCTGTCTCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201491.2 |
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| CDS-3UTR GCA 90 bp | CATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAAACCATGGAACAAGGCACGCGGCCTGCCTGGTGTTaGTGGAGACCCCGCCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: HSRVTVHQYKVQTMEQGTRPAWC*WRPRLS Trigger: GGAGAGGCGGGGTCTCCAGCAACACCAGGCAGGCCG...CGTGCCTTGTTCCATGGTTTGCACCTTGTACTGATGCACCGTGACCCTGGAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR CCA 90 bp | GGTGAGACAGAAACAAGGTTTGTGGGAGCAGAAGCCTCTCAAGGGAGCTGGCACCCTGCCTGGTGTTGCTaGAGACCCCGCCTCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: GETETRFVGAEASQGSWHPAWCC*RPRLST Trigger: GGTGGAGAGGCGGGGTCTCCAGCAACACCAGGCAGG...GTGCCAGCTCCCTTGAGAGGCTTCTGCTCCCACAAACCTTGTTTCTGTCTCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201491.2 |
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| CDS-3UTR GCA 90 bp | GAAGCTGTCCAAGCATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAAACCATCGGCCTGCCTGGTGTTaGTGGAGACCCCGCCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: EAVQAFQGHGASVQGANHRPAWC*WRPRLS Trigger: GGAGAGGCGGGGTCTCCAGCAACACCAGGCAGGCCG...ATGGTTTGCACCTTGTACTGATGCACCGTGACCCTGGAATGCTTGGACAGCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR CCA 90 bp | CATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAAACCATGGAACAAGGCACGCCTGCCTGGTGTTGCTaGAGACCCCGCCTCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: HSRVTVHQYKVQTMEQGTPAWCC*RPRLST Trigger: GGTGGAGAGGCGGGGTCTCCAGCAACACCAGGCAGG...CGTGCCTTGTTCCATGGTTTGCACCTTGTACTGATGCACCGTGACCCTGGAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR GCA 90 bp | AGTCACCGCTCCAGTCCTGATGTGGTTAGTTTGAAGAAGCTGTCCAAGCATTCCCGGCCTGCCTGGTGTTaGTGGAGACCCCGCCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: SHRSSPDVVSLKKLSKHSRPAWC*WRPRLS Trigger: GGAGAGGCGGGGTCTCCAGCAACACCAGGCAGGCCG...GGAATGCTTGGACAGCTTCTTCAAACTAACCACATCAGGACTGGAGCGGTGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR GCA 90 bp | CTGAGTCACCGCTCCAGTCCTGATGTGGTTAGTTTGAAGAAGCTGTCCAAGCATCGGCCTGCCTGGTGTTaGTGGAGACCCCGCCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LSHRSSPDVVSLKKLSKHRPAWC*WRPRLS Trigger: GGAGAGGCGGGGTCTCCAGCAACACCAGGCAGGCCG...ATGCTTGGACAGCTTCTTCAAACTAACCACATCAGGACTGGAGCGGTGACTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR CCA 90 bp | CATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAAACCATGGAACAAGGCACGGCTGCCAGGGCTCTCTaGTATGCTCGCCAGAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: HSRVTVHQYKVQTMEQGTAARAL*YARQSA Trigger: GGCACTCTGGCGAGCATACCAGAGAGCCCTGGCAGC...CGTGCCTTGTTCCATGGTTTGCACCTTGTACTGATGCACCGTGACCCTGGAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR CCA 90 bp | CAGCTGAGTCACCGCTCCAGTCCTGATGTGGTTAGTTTGAAGAAGCTGTCCAAGCCTGCCTGGTGTTGCTaGAGACCCCGCCTCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: QLSHRSSPDVVSLKKLSKPAWCC*RPRLST Trigger: GGTGGAGAGGCGGGGTCTCCAGCAACACCAGGCAGG...CTTGGACAGCTTCTTCAAACTAACCACATCAGGACTGGAGCGGTGACTCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR CCA 90 bp | GAAGCTGTCCAAGCATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAAACCATCCTGCCTGGTGTTGCTaGAGACCCCGCCTCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: EAVQAFQGHGASVQGANHPAWCC*RPRLST Trigger: GGTGGAGAGGCGGGGTCTCCAGCAACACCAGGCAGG...ATGGTTTGCACCTTGTACTGATGCACCGTGACCCTGGAATGCTTGGACAGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR CCA 90 bp | ACAAAAGCATCCTCCACAGTGAGCCAACCCATAAGGCTCCTCCTTGGCCCTGAGAGCCCAGGGATACCATaGTCAGAGTGCGGCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TKASSTVSQPIRLLLGPESPGIP*SECGLP Trigger: AGGCAGGCCGCACTCTGACCATGGTATCCCTGGGCT...CTCAGGGCCAAGGAGGAGCCTTATGGGTTGGCTCACTGTGGAGGATGCTTTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201491.2 |
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| CDS-3UTR TCA 90 bp | GGTGAGACAGAAACAAGGTTTGTGGGAGCAGAAGCCTCTCAAGGGAGCTGGCACCTCCACCAGCTGCTGTaGGATCATGTCACCTACGCC | + |
|
Preference number: 4 (lower is better) Translates to: GETETRFVGAEASQGSWHLHQLL*DHVTYA Trigger: GGCGTAGGTGACATGATCTCACAGCAGCTGGTGGAG...GTGCCAGCTCCCTTGAGAGGCTTCTGCTCCCACAAACCTTGTTTCTGTCTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201491.2 |
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| CDS-3UTR CCA 90 bp | GCTGTCTTCAGACACACCAGAAGAGGGCATCAGACCCCATTACAGATGGTTGTGGCTGCCAGGGCTCTCTaGTATGCTCGCCAGAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AVFRHTRRGHQTPLQMVVAARAL*YARQSA Trigger: GGCACTCTGGCGAGCATACCAGAGAGCCCTGGCAGC...CACAACCATCTGTAATGGGGTCTGATGCCCTCTTCTGGTGTGTCTGAAGACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 |
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| CDS-3UTR CCA 90 bp | CGCTCCAGTCCTGATGTGGTTAGTTTGAAGAAGCTGTCCAAGCATTCCAGGGTCGCTGCCAGGGCTCTCTaGTATGCTCGCCAGAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSSPDVVSLKKLSKHSRVAARAL*YARQSA Trigger: GGCACTCTGGCGAGCATACCAGAGAGCCCTGGCAGC...GACCCTGGAATGCTTGGACAGCTTCTTCAAACTAACCACATCAGGACTGGAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR CCA 90 bp | TGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCAGACCCCATTACAGATGGTCCTGCCTGGTGTTGCTaGAGACCCCGCCTCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: CSCLQTHQKRASDPITDGPAWCC*RPRLST Trigger: GGTGGAGAGGCGGGGTCTCCAGCAACACCAGGCAGG...ACCATCTGTAATGGGGTCTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 |
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| CDS-3UTR TCA 90 bp | ACAAAAGCATCCTCCACAGTGAGCCAACCCATAAGGCTCCTCCTTGGCCCTGAGGGGCTGACATTCCATTaGGTATCCCGACCAGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TKASSTVSQPIRLLLGPEGLTFH*VSRPVG Trigger: TCCCACTGGTCGGGATACTCAATGGAATGTCAGCCC...CTCAGGGCCAAGGAGGAGCCTTATGGGTTGGCTCACTGTGGAGGATGCTTTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201491.2 |
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| CDS-3UTR GCA 90 bp | AAAGGCTCAAAGCTTCTGAATGTAGCCCCCGAGACTCTGAGGAGGCCTGACCAGTTTCCACGGATGTGCTaGCAGGGCTCTCTGGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: KGSKLLNVAPETLRRPDQFPRMC*QGSLVC Trigger: GCATACCAGAGAGCCCTGGCAGCACATCCGTGGAAA...CTGGTCAGGCCTCCTCAGAGTCTCGGGGGCTACATTCAGAAGCTTTGAGCCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201491.2 |
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| CDS-3UTR GCA 90 bp | GACAGAAACAAGGTTTGTGGGAGCAGAAGCCTCTCAAGGGAGCTGGCACGTCAGCGCCTCTCCACCAGCTaGTGTGAGATCATGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: DRNKVCGSRSLSRELARQRLSTS*CEIMSP Trigger: AGGTGACATGATCTCACAGCAGCTGGTGGAGAGGCG...CTGACGTGCCAGCTCCCTTGAGAGGCTTCTGCTCCCACAAACCTTGTTTCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201491.2 |
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| CDS-3UTR CCA 90 bp | CAGCTGAGTCACCGCTCCAGTCCTGATGTGGTTAGTTTGAAGAAGCTGTCCAAGAGCCCAGGGATACCATaGTCAGAGTGCGGCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QLSHRSSPDVVSLKKLSKSPGIP*SECGLP Trigger: AGGCAGGCCGCACTCTGACCATGGTATCCCTGGGCT...CTTGGACAGCTTCTTCAAACTAACCACATCAGGACTGGAGCGGTGACTCAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201171.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR CCA 90 bp | GTCCAAGCATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAAACCATGGAACAAGCCCAGGGATACCATaGTCAGAGTGCGGCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VQAFQGHGASVQGANHGTSPGIP*SECGLP Trigger: AGGCAGGCCGCACTCTGACCATGGTATCCCTGGGCT...TGTTCCATGGTTTGCACCTTGTACTGATGCACCGTGACCCTGGAATGCTTGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201171.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR CCA 90 bp | GAAGAAGCTGTCCAAGCATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAAACAGCCCAGGGATACCATaGTCAGAGTGCGGCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: EEAVQAFQGHGASVQGANSPGIP*SECGLP Trigger: AGGCAGGCCGCACTCTGACCATGGTATCCCTGGGCT...GTTTGCACCTTGTACTGATGCACCGTGACCCTGGAATGCTTGGACAGCTTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201171.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR TCA 90 bp | AGCATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAAACCATGGAACAAGGCACTCCACCAGCTGCTGTaGGATCATGTCACCTACGCC | + |
|
Preference number: 4 (lower is better) Translates to: SIPGSRCISTRCKPWNKALHQLL*DHVTYA Trigger: GGCGTAGGTGACATGATCTCACAGCAGCTGGTGGAG...TGCCTTGTTCCATGGTTTGCACCTTGTACTGATGCACCGTGACCCTGGAATGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR TCA 90 bp | AAGCTGTCCAAGCATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAAACCATGCTCCACCAGCTGCTGTaGGATCATGTCACCTACGCC | + |
|
Preference number: 4 (lower is better) Translates to: KLSKHSRVTVHQYKVQTMLHQLL*DHVTYA Trigger: GGCGTAGGTGACATGATCTCACAGCAGCTGGTGGAG...CATGGTTTGCACCTTGTACTGATGCACCGTGACCCTGGAATGCTTGGACAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR GCA 90 bp | CATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAAACCATGGAACAAGGCACGCGCCTCTCCACCAGCTaGTGTGAGATCATGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: HSRVTVHQYKVQTMEQGTRLSTS*CEIMSP Trigger: AGGTGACATGATCTCACAGCAGCTGGTGGAGAGGCG...CGTGCCTTGTTCCATGGTTTGCACCTTGTACTGATGCACCGTGACCCTGGAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR GCA 90 bp | TCAGGTGAGACAGAAACAAGGTTTGTGGGAGCAGAAGCCTCTCAAGGGAGCTGGATCTTCTTCAGTGCATaGACCTTCGTGGTGCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGETETRFVGAEASQGSWIFFSA*TFVVPG Trigger: CCCGGGCACCACGAAGGTGCATGCACTGAAGAAGAT...CCAGCTCCCTTGAGAGGCTTCTGCTCCCACAAACCTTGTTTCTGTCTCACCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201491.2 |
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| CDS-3UTR CCA 90 bp | GGGTATATACATGTTTGTGCAGGTGCTTCAGAGGCCAGAAGAGAACATCAGATCCCTGCCTGGTGTTGCTaGAGACCCCGCCTCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GYIHVCAGASEARREHQIPAWCC*RPRLST Trigger: GGTGGAGAGGCGGGGTCTCCAGCAACACCAGGCAGG...GATCTGATGTTCTCTTCTGGCCTCTGAAGCACCTGCACAAACATGTATATACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR CCA 90 bp | TGTCTATTCGTGGGTATATACATGTTTGTGCAGGTGCTTCAGAGGCCAGAAGAGCCTGCCTGGTGTTGCTaGAGACCCCGCCTCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: CLFVGIYMFVQVLQRPEEPAWCC*RPRLST Trigger: GGTGGAGAGGCGGGGTCTCCAGCAACACCAGGCAGG...CTCTTCTGGCCTCTGAAGCACCTGCACAAACATGTATATACCCACGAATAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000202241.4 |
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| CDS-3UTR CCA 90 bp | TGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCAGACCCCATTACAGATGGTAGCCCAGGGATACCATaGTCAGAGTGCGGCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CSCLQTHQKRASDPITDGSPGIP*SECGLP Trigger: AGGCAGGCCGCACTCTGACCATGGTATCCCTGGGCT...ACCATCTGTAATGGGGTCTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 |
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| CDS-3UTR CCA 90 bp | AGTCACCGCTCCAGTCCTGATGTGGTTAGTTTGAAGAAGCTGTCCAAGCATTCCAGCCCAGGGATACCATaGTCAGAGTGCGGCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SHRSSPDVVSLKKLSKHSSPGIP*SECGLP Trigger: AGGCAGGCCGCACTCTGACCATGGTATCCCTGGGCT...GGAATGCTTGGACAGCTTCTTCAAACTAACCACATCAGGACTGGAGCGGTGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201171.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR CCA 90 bp | CATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAAACCATGGAACAAGGCACGAGTCCCGCTTCAGTTTaGCCCAATTGTCCTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HSRVTVHQYKVQTMEQGTSPASV*PNCPGL Trigger: CAGCCCAGGACAATTGGGCCAAACTGAAGCGGGACT...CGTGCCTTGTTCCATGGTTTGCACCTTGTACTGATGCACCGTGACCCTGGAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000154241.8 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| 3UTR CAA 72 bp | CAGCTGAGTCACCGCTCCAGTCCTGATGTGGTTAGTTaGAAGAAGCTGTCCAAGCATTCCAGGGTCACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QLSHRSSPDVVS*KKLSKHSRVTV Trigger: CACCGTGACCCTGGAATGCTTGGACAGCTTCTTCAAACTAACCACATCAGGACTGGAGCGGTGACTCAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201171.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| 3UTR CAA 72 bp | ACCAAACGTGGAACTCAGGTGAGACAGAAACAAGGTTaGTGGGAGCAGAAGCCTCTCAAGGGAGCTGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: TKRGTQVRQKQG*WEQKPLKGAGT Trigger: CGTGCCAGCTCCCTTGAGAGGCTTCTGCTCCCACAAACCTTGTTTCTGTCTCACCTGAGTTCCACGTTTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201491.2 |
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| CDS-3UTR TCA 90 bp | GAAGCTGTCCAAGCATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAAACCATACCTACGCCCATCAGTaGTCCAGCTGTCAGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: EAVQAFQGHGASVQGANHTYAHQ*SSCQNL Trigger: CAGGTTCTGACAGCTGGATCACTGATGGGCGTAGGT...ATGGTTTGCACCTTGTACTGATGCACCGTGACCCTGGAATGCTTGGACAGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR TCA 90 bp | TGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCAGACCCCATTACAGATGGTCTCCACCAGCTGCTGTaGGATCATGTCACCTACGCC | + |
|
Preference number: 4 (lower is better) Translates to: CSCLQTHQKRASDPITDGLHQLL*DHVTYA Trigger: GGCGTAGGTGACATGATCTCACAGCAGCTGGTGGAG...ACCATCTGTAATGGGGTCTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 |
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| CDS-3UTR TCA 90 bp | GAAGAAGCTGTCCAAGCATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAAACGGGCTGACATTCCATTaGGTATCCCGACCAGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: EEAVQAFQGHGASVQGANGLTFH*VSRPVG Trigger: TCCCACTGGTCGGGATACTCAATGGAATGTCAGCCC...GTTTGCACCTTGTACTGATGCACCGTGACCCTGGAATGCTTGGACAGCTTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR GCA 90 bp | AAGCTGTCCAAGCATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAAACCATGCGCCTCTCCACCAGCTaGTGTGAGATCATGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: KLSKHSRVTVHQYKVQTMRLSTS*CEIMSP Trigger: AGGTGACATGATCTCACAGCAGCTGGTGGAGAGGCG...CATGGTTTGCACCTTGTACTGATGCACCGTGACCCTGGAATGCTTGGACAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR GCA 90 bp | CATCTCTCCAGCCCCCAGGACACAATTCTTATAGTGTGTCCCCATCAGCTAAGGATCTTCTTCAGTGCATaGACCTTCGTGGTGCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: HLSSPQDTILIVCPHQLRIFFSA*TFVVPG Trigger: CCCGGGCACCACGAAGGTGCATGCACTGAAGAAGAT...CCTTAGCTGATGGGGACACACTATAAGAATTGTGTCCTGGGGGCTGGAGAGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 |
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| CDS-3UTR GCA 90 bp | AAGCTGTCCAAGCATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAAACCATGATCTTCTTCAGTGCATaGACCTTCGTGGTGCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KLSKHSRVTVHQYKVQTMIFFSA*TFVVPG Trigger: CCCGGGCACCACGAAGGTGCATGCACTGAAGAAGAT...CATGGTTTGCACCTTGTACTGATGCACCGTGACCCTGGAATGCTTGGACAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201171.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR GCA 90 bp | AAGCATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAAACCATGGAACAAGGCATCTTCTTCAGTGCATaGACCTTCGTGGTGCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KHSRVTVHQYKVQTMEQGIFFSA*TFVVPG Trigger: CCCGGGCACCACGAAGGTGCATGCACTGAAGAAGAT...GCCTTGTTCCATGGTTTGCACCTTGTACTGATGCACCGTGACCCTGGAATGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201171.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR GCA 90 bp | ACAGAAACAAGGTTTGTGGGAGCAGAAGCCTCTCAAGGGAGCTGGCACGTCAGCCAACATCTTCTTCAGTaGATGCACCTTCGTGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TETRFVGAEASQGSWHVSQHLLQ*MHLRGA Trigger: GGCACCACGAAGGTGCATGCACTGAAGAAGATGTTG...GCTGACGTGCCAGCTCCCTTGAGAGGCTTCTGCTCCCACAAACCTTGTTTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201491.2 |
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| CDS-3UTR CCA 90 bp | TGTCTATTCGTGGGTATATACATGTTTGTGCAGGTGCTTCAGAGGCCAGAAGAGGCTGCCAGGGCTCTCTaGTATGCTCGCCAGAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CLFVGIYMFVQVLQRPEEAARAL*YARQSA Trigger: GGCACTCTGGCGAGCATACCAGAGAGCCCTGGCAGC...CTCTTCTGGCCTCTGAAGCACCTGCACAAACATGTATATACCCACGAATAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000202241.4 |
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| CDS-3UTR CCA 90 bp | GGGTATATACATGTTTGTGCAGGTGCTTCAGAGGCCAGAAGAGAACATCAGATCGCTGCCAGGGCTCTCTaGTATGCTCGCCAGAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GYIHVCAGASEARREHQIAARAL*YARQSA Trigger: GGCACTCTGGCGAGCATACCAGAGAGCCCTGGCAGC...GATCTGATGTTCTCTTCTGGCCTCTGAAGCACCTGCACAAACATGTATATACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR CCA 90 bp | TGTGGTTGCTGGGATTTGAACTCAGGAGCTTCTGAAGAGCAGTCAGTGCTCTTAAGCCCAGGGATACCATaGTCAGAGTGCGGCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CGCWDLNSGASEEQSVLLSPGIP*SECGLP Trigger: AGGCAGGCCGCACTCTGACCATGGTATCCCTGGGCT...TAAGAGCACTGACTGCTCTTCAGAAGCTCCTGAGTTCAAATCCCAGCAACCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 |
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| CDS-3UTR CCA 90 bp | GAAGAAGCTGTCCAAGCATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAAACAGTCCCGCTTCAGTTTaGCCCAATTGTCCTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EEAVQAFQGHGASVQGANSPASV*PNCPGL Trigger: CAGCCCAGGACAATTGGGCCAAACTGAAGCGGGACT...GTTTGCACCTTGTACTGATGCACCGTGACCCTGGAATGCTTGGACAGCTTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000154241.8 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR CCA 90 bp | CGCTCCAGTCCTGATGTGGTTAGTTTGAAGAAGCTGTCCAAGCATTCCAGGGTCAGTCCCGCTTCAGTTTaGCCCAATTGTCCTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSSPDVVSLKKLSKHSRVSPASV*PNCPGL Trigger: CAGCCCAGGACAATTGGGCCAAACTGAAGCGGGACT...GACCCTGGAATGCTTGGACAGCTTCTTCAAACTAACCACATCAGGACTGGAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
||
| CDS-3UTR CCA 90 bp | GGAACTCAGGTGAGACAGAAACAAGGTTTGTGGGAGCAGAAGCCTCTCAAGGGAAGTCCCGCTTCAGTTTaGCCCAATTGTCCTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTQVRQKQGLWEQKPLKGSPASV*PNCPGL Trigger: CAGCCCAGGACAATTGGGCCAAACTGAAGCGGGACT...TCCCTTGAGAGGCTTCTGCTCCCACAAACCTTGTTTCTGTCTCACCTGAGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201491.2 |
||
| CDS-3UTR CCA 90 bp | GAAGAAGCTGTCCAAGCATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAAACAGAGCCGCTTCAGTTTaGCCCAATTGTCCTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EEAVQAFQGHGASVQGANRAASV*PNCPGL Trigger: CAGCCCAGGACAATTGGGCCAAACTGAAGCGGCTCT...GTTTGCACCTTGTACTGATGCACCGTGACCCTGGAATGCTTGGACAGCTTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200744.4 |
||
| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGATTGCTGGGACTaGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCDCWD*NSGPLEEQSVL Trigger: GAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAGTCCCAGCAATCACATGGTGGCTCACAACCATCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 |
||
| CDS-3UTR TCA 90 bp | TTTGAAGAAGCTGTCCAAGCATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAACCTACGCCCATCAGTaGTCCAGCTGTCAGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: FEEAVQAFQGHGASVQGATYAHQ*SSCQNL Trigger: CAGGTTCTGACAGCTGGATCACTGATGGGCGTAGGT...TGCACCTTGTACTGATGCACCGTGACCCTGGAATGCTTGGACAGCTTCTTCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
||
| CDS-3UTR TCA 90 bp | TGTGGTTGCTGGGATTTGAACTCAGGAGCTTCTGAAGAGCAGTCAGTGCTCTTACTCCACCAGCTGCTGTaGGATCATGTCACCTACGCC | + |
|
Preference number: 4 (lower is better) Translates to: CGCWDLNSGASEEQSVLLLHQLL*DHVTYA Trigger: GGCGTAGGTGACATGATCTCACAGCAGCTGGTGGAG...TAAGAGCACTGACTGCTCTTCAGAAGCTCCTGAGTTCAAATCCCAGCAACCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 |
||
| CDS-3UTR TCA 90 bp | TCCAAGCATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAAACCATGGAACAAGGGCTGACATTCCATTaGGTATCCCGACCAGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SKHSRVTVHQYKVQTMEQGLTFH*VSRPVG Trigger: TCCCACTGGTCGGGATACTCAATGGAATGTCAGCCC...TTGTTCCATGGTTTGCACCTTGTACTGATGCACCGTGACCCTGGAATGCTTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
||
| CDS-3UTR TCA 90 bp | TGTGATTGCTGGGACTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAGGGCTGACATTCCATTaGGTATCCCGACCAGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CDCWDLNSGPLEEQSVLLGLTFH*VSRPVG Trigger: TCCCACTGGTCGGGATACTCAATGGAATGTCAGCCC...TAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAGTCCCAGCAATCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 |
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| CDS-3UTR TCA 90 bp | TCCAGTCCTGATGTGGTTAGTTTGAAGAAGCTGTCCAAGCATTCCAGGGTCACGGGGCTGACATTCCATTaGGTATCCCGACCAGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSPDVVSLKKLSKHSRVTGLTFH*VSRPVG Trigger: TCCCACTGGTCGGGATACTCAATGGAATGTCAGCCC...CGTGACCCTGGAATGCTTGGACAGCTTCTTCAAACTAACCACATCAGGACTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
||
| CDS-3UTR GCA 90 bp | TCCAGTCCTGATGTGGTTAGTTTGAAGAAGCTGTCCAAGCATTCCAGGGTCACGTTTCCACGGATGTGCTaGCAGGGCTCTCTGGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: SSPDVVSLKKLSKHSRVTFPRMC*QGSLVC Trigger: GCATACCAGAGAGCCCTGGCAGCACATCCGTGGAAA...CGTGACCCTGGAATGCTTGGACAGCTTCTTCAAACTAACCACATCAGGACTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
||
| CDS-3UTR GCA 90 bp | CTGAGTCACCGCTCCAGTCCTGATGTGGTTAGTTTGAAGAAGCTGTCCAAGCATTTTCCACGGATGTGCTaGCAGGGCTCTCTGGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: LSHRSSPDVVSLKKLSKHFPRMC*QGSLVC Trigger: GCATACCAGAGAGCCCTGGCAGCACATCCGTGGAAA...ATGCTTGGACAGCTTCTTCAAACTAACCACATCAGGACTGGAGCGGTGACTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
||
| CDS-3UTR GCA 90 bp | TTTGAAGAAGCTGTCCAAGCATTCCAGGGTCACGGTGCATCAGTACAAGGTGCACGCCTCTCCACCAGCTaGTGTGAGATCATGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: FEEAVQAFQGHGASVQGARLSTS*CEIMSP Trigger: AGGTGACATGATCTCACAGCAGCTGGTGGAGAGGCG...TGCACCTTGTACTGATGCACCGTGACCCTGGAATGCTTGGACAGCTTCTTCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
||
| CDS-3UTR GCA 90 bp | AGTCACCGCTCCAGTCCTGATGTGGTTAGTTTGAAGAAGCTGTCCAAGCATTCCATCTTCTTCAGTGCATaGACCTTCGTGGTGCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SHRSSPDVVSLKKLSKHSIFFSA*TFVVPG Trigger: CCCGGGCACCACGAAGGTGCATGCACTGAAGAAGAT...GGAATGCTTGGACAGCTTCTTCAAACTAACCACATCAGGACTGGAGCGGTGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201171.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
||
| CDS-3UTR CCA 90 bp | AAGCATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAAACCATGGAACAAGGCCCAGCTGTCAGAACCTaGACTTTCCACGGATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KHSRVTVHQYKVQTMEQGPAVRT*TFHGCA Trigger: AGCACATCCGTGGAAAGTCCAGGTTCTGACAGCTGG...GCCTTGTTCCATGGTTTGCACCTTGTACTGATGCACCGTGACCCTGGAATGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
||
| CDS-3UTR CCA 90 bp | GATCTCTTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAAGCCCAGGGATACCATaGTCAGAGTGCGGCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DLFTDGCEPPCGCWDLNSSPGIP*SECGLP Trigger: AGGCAGGCCGCACTCTGACCATGGTATCCCTGGGCT...TGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAAAGAGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 |
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| CDS-3UTR CCA 90 bp | CTGAGTCACCGCTCCAGTCCTGATGTGGTTAGTTTGAAGAAGCTGTCCAAGCATAGTCCCGCTTCAGTTTaGCCCAATTGTCCTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSHRSSPDVVSLKKLSKHSPASV*PNCPGL Trigger: CAGCCCAGGACAATTGGGCCAAACTGAAGCGGGACT...ATGCTTGGACAGCTTCTTCAAACTAACCACATCAGGACTGGAGCGGTGACTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR TCA 90 bp | TGTGGTTGCTGGGATTTGAACTCAGGAGCTTCTGAAGAGCAGTCAGTGCTCTTAACCTACGCCCATCAGTaGTCCAGCTGTCAGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: CGCWDLNSGASEEQSVLLTYAHQ*SSCQNL Trigger: CAGGTTCTGACAGCTGGATCACTGATGGGCGTAGGT...TAAGAGCACTGACTGCTCTTCAGAAGCTCCTGAGTTCAAATCCCAGCAACCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 |
||
| CDS-3UTR TCA 90 bp | TGTCTATTCGTGGGTATATACATGTTTGTGCAGGTGCTTCAGAGGCCAGAAGAGCTCCACCAGCTGCTGTaGGATCATGTCACCTACGCC | + |
|
Preference number: 4 (lower is better) Translates to: CLFVGIYMFVQVLQRPEELHQLL*DHVTYA Trigger: GGCGTAGGTGACATGATCTCACAGCAGCTGGTGGAG...CTCTTCTGGCCTCTGAAGCACCTGCACAAACATGTATATACCCACGAATAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000202241.4 |
||
| CDS-3UTR GCA 90 bp | GCTGTCTTCAGACACACCAGAAGAGGGCATCAGACCCCATTACAGATGGTTGTGCAACATCTTCTTCAGTaGATGCACCTTCGTGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AVFRHTRRGHQTPLQMVVQHLLQ*MHLRGA Trigger: GGCACCACGAAGGTGCATGCACTGAAGAAGATGTTG...CACAACCATCTGTAATGGGGTCTGATGCCCTCTTCTGGTGTGTCTGAAGACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 |
||
| CDS-3UTR GCA 90 bp | AAGCTGTCCAAGCATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAAACCATGCAACATCTTCTTCAGTaGATGCACCTTCGTGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KLSKHSRVTVHQYKVQTMQHLLQ*MHLRGA Trigger: GGCACCACGAAGGTGCATGCACTGAAGAAGATGTTG...CATGGTTTGCACCTTGTACTGATGCACCGTGACCCTGGAATGCTTGGACAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201171.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR GCA 90 bp | GTCCAAGCATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAAACCATGGAACACAACATCTTCTTCAGTaGATGCACCTTCGTGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VQAFQGHGASVQGANHGTQHLLQ*MHLRGA Trigger: GGCACCACGAAGGTGCATGCACTGAAGAAGATGTTG...TGTTCCATGGTTTGCACCTTGTACTGATGCACCGTGACCCTGGAATGCTTGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201171.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR CCA 90 bp | AGTCACCGCTCCAGTCCTGATGTGGTTAGTTTGAAGAAGCTGTCCAAGCATTCCCCAGCTGTCAGAACCTaGACTTTCCACGGATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SHRSSPDVVSLKKLSKHSPAVRT*TFHGCA Trigger: AGCACATCCGTGGAAAGTCCAGGTTCTGACAGCTGG...GGAATGCTTGGACAGCTTCTTCAAACTAACCACATCAGGACTGGAGCGGTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR CCA 90 bp | TCCAAGCATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAAACCATGGAACAACCAGCTGTCAGAACCTaGACTTTCCACGGATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SKHSRVTVHQYKVQTMEQPAVRT*TFHGCA Trigger: AGCACATCCGTGGAAAGTCCAGGTTCTGACAGCTGG...TTGTTCCATGGTTTGCACCTTGTACTGATGCACCGTGACCCTGGAATGCTTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR CCA 90 bp | TTTGAAGAAGCTGTCCAAGCATTCCAGGGTCACGGTGCATCAGTACAAGGTGCACCAGCTGTCAGAACCTaGACTTTCCACGGATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FEEAVQAFQGHGASVQGAPAVRT*TFHGCA Trigger: AGCACATCCGTGGAAAGTCCAGGTTCTGACAGCTGG...TGCACCTTGTACTGATGCACCGTGACCCTGGAATGCTTGGACAGCTTCTTCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCAGGAGCTTCTGAAGAGCAGTCAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NSGASEEQSVL Trigger: GAGCACTGACTGCTCTTCAGAAGCTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 |
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| CDS-3UTR TCA 90 bp | GGGTATATACATGTTTGTGCAGGTGCTTCAGAGGCCAGAAGAGAACATCAGATCACCTACGCCCATCAGTaGTCCAGCTGTCAGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: GYIHVCAGASEARREHQITYAHQ*SSCQNL Trigger: CAGGTTCTGACAGCTGGATCACTGATGGGCGTAGGT...GATCTGATGTTCTCTTCTGGCCTCTGAAGCACCTGCACAAACATGTATATACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR GCA 90 bp | TGTCTATTCGTGGGTATATACATGTTTGTGCAGGTGCTTCAGAGGCCAGAAGAGTTTCCACGGATGTGCTaGCAGGGCTCTCTGGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: CLFVGIYMFVQVLQRPEEFPRMC*QGSLVC Trigger: GCATACCAGAGAGCCCTGGCAGCACATCCGTGGAAA...CTCTTCTGGCCTCTGAAGCACCTGCACAAACATGTATATACCCACGAATAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000202241.4 |
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| CDS-3UTR GCA 90 bp | GGGTATATACATGTTTGTGCAGGTGCTTCAGAGGCCAGAAGAGAACATCAGATCCGCCTCTCCACCAGCTaGTGTGAGATCATGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: GYIHVCAGASEARREHQIRLSTS*CEIMSP Trigger: AGGTGACATGATCTCACAGCAGCTGGTGGAGAGGCG...GATCTGATGTTCTCTTCTGGCCTCTGAAGCACCTGCACAAACATGTATATACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR GCA 90 bp | GGGTATATACATGTTTGTGCAGGTGCTTCAGAGGCCAGAAGAGAACATCAGATCATCTTCTTCAGTGCATaGACCTTCGTGGTGCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GYIHVCAGASEARREHQIIFFSA*TFVVPG Trigger: CCCGGGCACCACGAAGGTGCATGCACTGAAGAAGAT...GATCTGATGTTCTCTTCTGGCCTCTGAAGCACCTGCACAAACATGTATATACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR GCA 90 bp | TCCAAGCATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAAACCATGGAACAACAACATCTTCTTCAGTaGATGCACCTTCGTGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SKHSRVTVHQYKVQTMEQQHLLQ*MHLRGA Trigger: GGCACCACGAAGGTGCATGCACTGAAGAAGATGTTG...TTGTTCCATGGTTTGCACCTTGTACTGATGCACCGTGACCCTGGAATGCTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201171.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR TCA 90 bp | TGGGTATATACATGTTTGTGCAGGTGCTTCAGAGGCCAGAAGAGAACATCAGATACCTACGCCCATCAGTaGTCCAGCTGTCAGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: WVYTCLCRCFRGQKRTSDTYAHQ*SSCQNL Trigger: CAGGTTCTGACAGCTGGATCACTGATGGGCGTAGGT...ATCTGATGTTCTCTTCTGGCCTCTGAAGCACCTGCACAAACATGTATATACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR TCA 90 bp | TGGGTATATACATGTTTGTGCAGGTGCTTCAGAGGCCAGAAGAGAACATCAGATGGGCTGACATTCCATTaGGTATCCCGACCAGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: WVYTCLCRCFRGQKRTSDGLTFH*VSRPVG Trigger: TCCCACTGGTCGGGATACTCAATGGAATGTCAGCCC...ATCTGATGTTCTCTTCTGGCCTCTGAAGCACCTGCACAAACATGTATATACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR GCA 90 bp | GGTATATACATGTTTGTGCAGGTGCTTCAGAGGCCAGAAGAGAACATCAGATCTTTTCCACGGATGTGCTaGCAGGGCTCTCTGGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: GIYMFVQVLQRPEENIRSFPRMC*QGSLVC Trigger: GCATACCAGAGAGCCCTGGCAGCACATCCGTGGAAA...AGATCTGATGTTCTCTTCTGGCCTCTGAAGCACCTGCACAAACATGTATATACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR GCA 90 bp | GTGTCCCCATCAGCTAAGGGCCAGAGTGACAGCAATATTATAAATGTCTTAGTGCGCCTCTCCACCAGCTaGTGTGAGATCATGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: VSPSAKGQSDSNIINVLVRLSTS*CEIMSP Trigger: AGGTGACATGATCTCACAGCAGCTGGTGGAGAGGCG...CACTAAGACATTTATAATATTGCTGTCACTCTGGCCCTTAGCTGATGGGGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 |
||
| CDS-3UTR GCA 90 bp | GGTATATACATGTTTGTGCAGGTGCTTCAGAGGCCAGAAGAGAACATCAGATCTCGCCTCTCCACCAGCTaGTGTGAGATCATGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: GIYMFVQVLQRPEENIRSRLSTS*CEIMSP Trigger: AGGTGACATGATCTCACAGCAGCTGGTGGAGAGGCG...AGATCTGATGTTCTCTTCTGGCCTCTGAAGCACCTGCACAAACATGTATATACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR GCA 90 bp | TGGGTATATACATGTTTGTGCAGGTGCTTCAGAGGCCAGAAGAGAACATCAGATATCTTCTTCAGTGCATaGACCTTCGTGGTGCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: WVYTCLCRCFRGQKRTSDIFFSA*TFVVPG Trigger: CCCGGGCACCACGAAGGTGCATGCACTGAAGAAGAT...ATCTGATGTTCTCTTCTGGCCTCTGAAGCACCTGCACAAACATGTATATACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
||
| CDS-3UTR CCA 90 bp | TACAGTAGGTCAAGGTTGGGATGGCTACCATTTTCTCTCCAACTGAGATCTTCCCCAGCTGTCAGAACCTaGACTTTCCACGGATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YSRSRLGWLPFSLQLRSSPAVRT*TFHGCA Trigger: AGCACATCCGTGGAAAGTCCAGGTTCTGACAGCTGG...GGAAGATCTCAGTTGGAGAGAAAATGGTAGCCATCCCAACCTTGACCTACTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201491.2 |
||
| CDS-3UTR CCA 90 bp | GTCCAAGCATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAAACCATGGAACAGTGCCCGGGATTAAGTaGTCTAAAACTTTGTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: VQAFQGHGASVQGANHGTVPGIK*SKTLYQ Trigger: CTGGTACAAAGTTTTAGACCACTTAATCCCGGGCAC...TGTTCCATGGTTTGCACCTTGTACTGATGCACCGTGACCCTGGAATGCTTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201171.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
||
| CDS-3UTR CCA 90 bp | CAGCTGAGTCACCGCTCCAGTCCTGATGTGGTTAGTTTGAAGAAGCTGTCCAAGGTGCCCGGGATTAAGTaGTCTAAAACTTTGTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: QLSHRSSPDVVSLKKLSKVPGIK*SKTLYQ Trigger: CTGGTACAAAGTTTTAGACCACTTAATCCCGGGCAC...CTTGGACAGCTTCTTCAAACTAACCACATCAGGACTGGAGCGGTGACTCAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201171.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
||
| CDS-3UTR CCA 90 bp | GGTATATACATGTTTGTGCAGGTGCTTCAGAGGCCAGAAGAGAACATCAGATCTAGTCCCGCTTCAGTTTaGCCCAATTGTCCTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GIYMFVQVLQRPEENIRSSPASV*PNCPGL Trigger: CAGCCCAGGACAATTGGGCCAAACTGAAGCGGGACT...AGATCTGATGTTCTCTTCTGGCCTCTGAAGCACCTGCACAAACATGTATATACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000154241.8 ENSMUST00000200833.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
||
| CDS-3UTR GCA 90 bp | GTCTATTCGTGGGTATATACATGTTTGTGCAGGTGCTTCAGAGGCCAGAAGAGACAACATCTTCTTCAGTaGATGCACCTTCGTGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VYSWVYTCLCRCFRGQKRQHLLQ*MHLRGA Trigger: GGCACCACGAAGGTGCATGCACTGAAGAAGATGTTG...TCTCTTCTGGCCTCTGAAGCACCTGCACAAACATGTATATACCCACGAATAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000202241.4 |
||
| CDS-3UTR CCA 90 bp | GATCAGCAACCCCATAGCATGGAAGCTGACACACTCCTTCCTTTTAAAGATTTCCCAGCTGTCAGAACCTaGACTTTCCACGGATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DQQPHSMEADTLLPFKDFPAVRT*TFHGCA Trigger: AGCACATCCGTGGAAAGTCCAGGTTCTGACAGCTGG...GAAATCTTTAAAAGGAAGGAGTGTGTCAGCTTCCATGCTATGGGGTTGCTGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 |
||
| CDS-3UTR CCA 90 bp | ATGAGCCACCAAACGTGGAACTCAGGTGAGACAGAAACAAGGTTTGTGGGAGCAGTGCCCGGGATTAAGTaGTCTAAAACTTTGTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: MSHQTWNSGETETRFVGAVPGIK*SKTLYQ Trigger: CTGGTACAAAGTTTTAGACCACTTAATCCCGGGCAC...TGCTCCCACAAACCTTGTTTCTGTCTCACCTGAGTTCCACGTTTGGTGGCTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201491.2 |
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| CDS-3UTR CCA 90 bp | GCGTCAGATCTCTTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGACAAGGTGCAAACCATaGAACAAGGCACGCTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ASDLFTDGCEPPCGCWDLTRCKP*NKARLE Trigger: TTCTAAGCGTGCCTTGTTCCATGGTTTGCACCTTGT...CAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAAAGAGATCTGACGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200833.4 |
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| CDS-3UTR GCA 90 bp | ATTCGTGGGTATATACATGTTTGTGCAGGTGCTTCAGAGGCCAGAAGAGAACATCAACATCTTCTTCAGTaGATGCACCTTCGTGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: IRGYIHVCAGASEARREHQHLLQ*MHLRGA Trigger: GGCACCACGAAGGTGCATGCACTGAAGAAGATGTTG...ATGTTCTCTTCTGGCCTCTGAAGCACCTGCACAAACATGTATATACCCACGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000202241.4 |
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| CDS-3UTR CCA 90 bp | TGTGGTTGCTGGGATTTGAACTCAGGAGCTTCTGAAGAGCAGTCAGTGCTCTTAGTGCCCGGGATTAAGTaGTCTAAAACTTTGTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: CGCWDLNSGASEEQSVLLVPGIK*SKTLYQ Trigger: CTGGTACAAAGTTTTAGACCACTTAATCCCGGGCAC...TAAGAGCACTGACTGCTCTTCAGAAGCTCCTGAGTTCAAATCCCAGCAACCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 |
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| CDS-3UTR CCA 90 bp | GGGTATATACATGTTTGTGCAGGTGCTTCAGAGGCCAGAAGAGAACATCAGATCGTGCCCGGGATTAAGTaGTCTAAAACTTTGTACCAG | + |
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Preference number: 4 (lower is better) Translates to: GYIHVCAGASEARREHQIVPGIK*SKTLYQ Trigger: CTGGTACAAAGTTTTAGACCACTTAATCCCGGGCAC...GATCTGATGTTCTCTTCTGGCCTCTGAAGCACCTGCACAAACATGTATATACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR CCA 90 bp | TGTCTATTCGTGGGTATATACATGTTTGTGCAGGTGCTTCAGAGGCCAGAAGAGGTGCCCGGGATTAAGTaGTCTAAAACTTTGTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLFVGIYMFVQVLQRPEEVPGIK*SKTLYQ Trigger: CTGGTACAAAGTTTTAGACCACTTAATCCCGGGCAC...CTCTTCTGGCCTCTGAAGCACCTGCACAAACATGTATATACCCACGAATAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000202241.4 |
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| CDS-3UTR CCA 90 bp | TTATTTAATGTATATGAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCCAGCTGTCAGAACCTaGACTTTCCACGGATGTGCT | + |
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Preference number: 4 (lower is better) Translates to: LFNVYEYTVAVFRHTRRGPAVRT*TFHGCA Trigger: AGCACATCCGTGGAAAGTCCAGGTTCTGACAGCTGG...CCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTCATATACATTAAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 |
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| CDS GCA 90 bp | GTGCGGCCTGCCTGGTGTTGCTGGAGACCCCGCCTCTCCACCAGCTaGTGTGAGATCATGTCACCTACGCCCATCAGTGATCCAGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VRPAWCCWRPRLSTS*CEIMSPTPISDPAV Trigger: GACAGCTGGATCACTGATGGGCGTAGGTGACATGATCTCACAGCAGCTGGTGGAGAGGCGGGGTCTCCAGCAACACCAGGCAGGCCGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000201491.2 ENSMUST00000202241.4 |
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| CDS-3UTR CAA 90 bp | CATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAAACCATGGAACAAGGCACGGCGGCCTGCCTGGTGTaGCTGGAGACCCCGCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HSRVTVHQYKVQTMEQGTAACLV*LETPPL Trigger: GAGAGGCGGGGTCTCCAGCAACACCAGGCAGGCCGC...CGTGCCTTGTTCCATGGTTTGCACCTTGTACTGATGCACCGTGACCCTGGAATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR CAA 90 bp | AAGCTGTCCAAGCATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAAACCATGGCGGCCTGCCTGGTGTaGCTGGAGACCCCGCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KLSKHSRVTVHQYKVQTMAACLV*LETPPL Trigger: GAGAGGCGGGGTCTCCAGCAACACCAGGCAGGCCGC...CATGGTTTGCACCTTGTACTGATGCACCGTGACCCTGGAATGCTTGGACAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR CAA 90 bp | CTGAGTCACCGCTCCAGTCCTGATGTGGTTAGTTTGAAGAAGCTGTCCAAGCATGCGGCCTGCCTGGTGTaGCTGGAGACCCCGCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: LSHRSSPDVVSLKKLSKHAACLV*LETPPL Trigger: GAGAGGCGGGGTCTCCAGCAACACCAGGCAGGCCGC...ATGCTTGGACAGCTTCTTCAAACTAACCACATCAGGACTGGAGCGGTGACTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS CCA 90 bp | GAGATCATGTCACCTACGCCCATCAGTGATCCAGCTGTCAGAACCTaGACTTTCCACGGATGTGCTGCCAGGGCTCTCTGGTATGCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: EIMSPTPISDPAVRT*TFHGCAARALWYAR Trigger: GCGAGCATACCAGAGAGCCCTGGCAGCACATCCGTGGAAAGTCCAGGTTCTGACAGCTGGATCACTGATGGGCGTAGGTGACATGATCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000201491.2 ENSMUST00000202241.4 |
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| CDS-3UTR CAA 90 bp | GTCTATTCGTGGGTATATACATGTTTGTGCAGGTGCTTCAGAGGCCAGAAGAGAGCGGCCTGCCTGGTGTaGCTGGAGACCCCGCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VYSWVYTCLCRCFRGQKRAACLV*LETPPL Trigger: GAGAGGCGGGGTCTCCAGCAACACCAGGCAGGCCGC...TCTCTTCTGGCCTCTGAAGCACCTGCACAAACATGTATATACCCACGAATAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000202241.4 |
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| CDS CCA 90 bp | AACTGCACAGCAGGCCAGAGCCGCTTCAGTTTGGCCCAATTGTCCTaGGCTGACATTCCATTGAGTATCCCGACCAGTGGGAGAAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: NCTAGQSRFSLAQLS*ADIPLSIPTSGRKQ Trigger: CTGCTTTCTCCCACTGGTCGGGATACTCAATGGAATGTCAGCCCAGGACAATTGGGCCAAACTGAAGCGGCTCTGGCCTGCTGTGCAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200744.4 |
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| CDS CCA 90 bp | ACTGGACAACAGCCAACCTGTAATGCAGGGGGACCAGGTAGAAGTTaGCTAACTGCACAGCAGGCCAGAGCCGCTTCAGTTTGGCCCAAT | + |
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Preference number: 5 (lower is better) Translates to: TGQQPTCNAGGPGRS*LTAQQARAASVWPN Trigger: ATTGGGCCAAACTGAAGCGGCTCTGGCCTGCTGTGCAGTTAGCCAACTTCTACCTGGTCCCCCTGCATTACAGGTTGGCTGTTGTCCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200744.4 |
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| CDS-3UTR CAA 90 bp | GATCAGCAACCCCATAGCATGGAAGCTGACACACTCCTTCCTTTTAAAGATTTCGCGGCCTGCCTGGTGTaGCTGGAGACCCCGCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: DQQPHSMEADTLLPFKDFAACLV*LETPPL Trigger: GAGAGGCGGGGTCTCCAGCAACACCAGGCAGGCCGC...GAAATCTTTAAAAGGAAGGAGTGTGTCAGCTTCCATGCTATGGGGTTGCTGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 |
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| CDS TCA 90 bp | AGTCCCGCTTCAGTTTGGCCCAATTGTCCTGGGCTGACATTCCATTaGGTATCCCGACCAGTGGGAGAAAGCAGCCTAGGAAACATGGGG | + |
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Preference number: 5 (lower is better) Translates to: SPASVWPNCPGLTFH*VSRPVGESSLGNMG Trigger: CCCCATGTTTCCTAGGCTGCTTTCTCCCACTGGTCGGGATACTCAATGGAATGTCAGCCCAGGACAATTGGGCCAAACTGAAGCGGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000154241.8 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000201491.2 ENSMUST00000202241.4 |
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| CDS TCA 90 bp | AGAGCCGCTTCAGTTTGGCCCAATTGTCCTGGGCTGACATTCCATTaGGTATCCCGACCAGTGGGAGAAAGCAGCCTAGGAAACATGGGG | + |
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Preference number: 5 (lower is better) Translates to: RAASVWPNCPGLTFH*VSRPVGESSLGNMG Trigger: CCCCATGTTTCCTAGGCTGCTTTCTCCCACTGGTCGGGATACTCAATGGAATGTCAGCCCAGGACAATTGGGCCAAACTGAAGCGGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200744.4 |
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| CDS-3UTR CAA 90 bp | CATCTCTCCAGCCCCCAGGACACAATTCTTATAGTGTGTCCCCATCAGCTAAGGCAGAGCCGCTTCAGTTaGGCCCAATTGTCCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HLSSPQDTILIVCPHQLRQSRFS*AQLSWA Trigger: AGCCCAGGACAATTGGGCCAAACTGAAGCGGCTCTG...CCTTAGCTGATGGGGACACACTATAAGAATTGTGTCCTGGGGGCTGGAGAGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200744.4 |
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| CDS-3UTR CAA 90 bp | AAAGGCTCAAAGCTTCTGAATGTAGCCCCCGAGACTCTGAGGAGGCCTGACCAGTTCAGTTTGGCCCAATaGTCCTGGGCTGACATTCCA | + |
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Preference number: 5 (lower is better) Translates to: KGSKLLNVAPETLRRPDQFSLAQ*SWADIP Trigger: TGGAATGTCAGCCCAGGACAATTGGGCCAAACTGAA...CTGGTCAGGCCTCCTCAGAGTCTCGGGGGCTACATTCAGAAGCTTTGAGCCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201491.2 |
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| CDS CCA 90 bp | AACATCTTCTTCAGTGCATGCACCTTCGTGGTGCCCGGGATTAAGTaGTCTAAAACTTTGTACCAGCCTCCGACGACAGGGCCCACAAAG | + |
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Preference number: 5 (lower is better) Translates to: NIFFSACTFVVPGIK*SKTLYQPPTTGPTK Trigger: CTTTGTGGGCCCTGTCGTCGGAGGCTGGTACAAAGTTTTAGACCACTTAATCCCGGGCACCACGAAGGTGCATGCACTGAAGAAGATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201171.4 ENSMUST00000201353.4 ENSMUST00000201491.2 ENSMUST00000202241.4 |
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| CDS GCA 90 bp | CCCCCTGATCTAACAACATCTTCTTCAGTGCATGCACCTTCGTGGTaGCCGGGATTAAGTGGTCTAAAACTTTGTACCAGCCTCCGACGA | + |
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Preference number: 5 (lower is better) Translates to: PPDLTTSSSVHAPSW*PGLSGLKLCTSLRR Trigger: TCGTCGGAGGCTGGTACAAAGTTTTAGACCACTTAATCCCGGGCACCACGAAGGTGCATGCACTGAAGAAGATGTTGTTAGATCAGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000201491.2 ENSMUST00000202241.4 |
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| CDS-3UTR CAA 90 bp | CATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAAACCATGGAACAAGGCACGAAGTGGTCTAAAACTTaGTACCAGCCTCCGACGACA | + |
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Preference number: 5 (lower is better) Translates to: HSRVTVHQYKVQTMEQGTKWSKT*YQPPTT Trigger: TGTCGTCGGAGGCTGGTACAAAGTTTTAGACCACTT...CGTGCCTTGTTCCATGGTTTGCACCTTGTACTGATGCACCGTGACCCTGGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201171.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR CAA 90 bp | TCAGGTGAGACAGAAACAAGGTTTGTGGGAGCAGAAGCCTCTCAAGGGAGCTGGAAGTGGTCTAAAACTTaGTACCAGCCTCCGACGACA | + |
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Preference number: 5 (lower is better) Translates to: SGETETRFVGAEASQGSWKWSKT*YQPPTT Trigger: TGTCGTCGGAGGCTGGTACAAAGTTTTAGACCACTT...CCAGCTCCCTTGAGAGGCTTCTGCTCCCACAAACCTTGTTTCTGTCTCACCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201491.2 |
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| CDS-3UTR CAA 90 bp | CGCTCCAGTCCTGATGTGGTTAGTTTGAAGAAGCTGTCCAAGCATTCCAGGGTCTTCAGTTTGGCCCAATaGTCCTGGGCTGACATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RSSPDVVSLKKLSKHSRVFSLAQ*SWADIP Trigger: TGGAATGTCAGCCCAGGACAATTGGGCCAAACTGAA...GACCCTGGAATGCTTGGACAGCTTCTTCAAACTAACCACATCAGGACTGGAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR CAA 90 bp | CAGCTGAGTCACCGCTCCAGTCCTGATGTGGTTAGTTTGAAGAAGCTGTCCAAGAAGTGGTCTAAAACTTaGTACCAGCCTCCGACGACA | + |
|
Preference number: 5 (lower is better) Translates to: QLSHRSSPDVVSLKKLSKKWSKT*YQPPTT Trigger: TGTCGTCGGAGGCTGGTACAAAGTTTTAGACCACTT...CTTGGACAGCTTCTTCAAACTAACCACATCAGGACTGGAGCGGTGACTCAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201171.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR CAA 90 bp | CGCTCCAGTCCTGATGTGGTTAGTTTGAAGAAGCTGTCCAAGCATTCCAGGGTCAAGTGGTCTAAAACTTaGTACCAGCCTCCGACGACA | + |
|
Preference number: 5 (lower is better) Translates to: RSSPDVVSLKKLSKHSRVKWSKT*YQPPTT Trigger: TGTCGTCGGAGGCTGGTACAAAGTTTTAGACCACTT...GACCCTGGAATGCTTGGACAGCTTCTTCAAACTAACCACATCAGGACTGGAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201171.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR CAA 90 bp | AAGCTGTCCAAGCATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAAACCATGAAGTGGTCTAAAACTTaGTACCAGCCTCCGACGACA | + |
|
Preference number: 5 (lower is better) Translates to: KLSKHSRVTVHQYKVQTMKWSKT*YQPPTT Trigger: TGTCGTCGGAGGCTGGTACAAAGTTTTAGACCACTT...CATGGTTTGCACCTTGTACTGATGCACCGTGACCCTGGAATGCTTGGACAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201171.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR CAA 90 bp | GTCCAAGCATTCCAGGGTCACGGTGCATCAGTACAAGGTGCAAACCATGGAACAAAGTGGTCTAAAACTTaGTACCAGCCTCCGACGACA | + |
|
Preference number: 5 (lower is better) Translates to: VQAFQGHGASVQGANHGTKWSKT*YQPPTT Trigger: TGTCGTCGGAGGCTGGTACAAAGTTTTAGACCACTT...TGTTCCATGGTTTGCACCTTGTACTGATGCACCGTGACCCTGGAATGCTTGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201171.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR CAA 90 bp | TTTGAAGAAGCTGTCCAAGCATTCCAGGGTCACGGTGCATCAGTACAAGGTGCATTCAGTTTGGCCCAATaGTCCTGGGCTGACATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FEEAVQAFQGHGASVQGAFSLAQ*SWADIP Trigger: TGGAATGTCAGCCCAGGACAATTGGGCCAAACTGAA...TGCACCTTGTACTGATGCACCGTGACCCTGGAATGCTTGGACAGCTTCTTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR CAA 90 bp | AGTCACCGCTCCAGTCCTGATGTGGTTAGTTTGAAGAAGCTGTCCAAGCATTCCTTCAGTTTGGCCCAATaGTCCTGGGCTGACATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SHRSSPDVVSLKKLSKHSFSLAQ*SWADIP Trigger: TGGAATGTCAGCCCAGGACAATTGGGCCAAACTGAA...GGAATGCTTGGACAGCTTCTTCAAACTAACCACATCAGGACTGGAGCGGTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR CAA 90 bp | CTGAGTCACCGCTCCAGTCCTGATGTGGTTAGTTTGAAGAAGCTGTCCAAGCATTTCAGTTTGGCCCAATaGTCCTGGGCTGACATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSHRSSPDVVSLKKLSKHFSLAQ*SWADIP Trigger: TGGAATGTCAGCCCAGGACAATTGGGCCAAACTGAA...ATGCTTGGACAGCTTCTTCAAACTAACCACATCAGGACTGGAGCGGTGACTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS-3UTR CAA 90 bp | TCCAGTCCTGATGTGGTTAGTTTGAAGAAGCTGTCCAAGCATTCCAGGGTCACGTTCAGTTTGGCCCAATaGTCCTGGGCTGACATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSPDVVSLKKLSKHSRVTFSLAQ*SWADIP Trigger: TGGAATGTCAGCCCAGGACAATTGGGCCAAACTGAA...CGTGACCCTGGAATGCTTGGACAGCTTCTTCAAACTAACCACATCAGGACTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS GCA 90 bp | AGTCCTGATCTAACAACATCTTCTTCAGTGCATGCACCTTCGTGGTaGCCGGGATTAAGTGGTCTAAAACTTTGTACCAGCCTCCGACGA | + |
|
Preference number: 5 (lower is better) Translates to: SPDLTTSSSVHAPSW*PGLSGLKLCTSLRR Trigger: TCGTCGGAGGCTGGTACAAAGTTTTAGACCACTTAATCCCGGGCACCACGAAGGTGCATGCACTGAAGAAGATGTTGTTAGATCAGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201171.4 |
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| CDS CCA 90 bp | GGTAGTCCTGATCTAACAACATCTTCTTCAGTGCATGCACCTTCGTaGTGCCCGGGATTAAGTGGTCTAAAACTTTGTACCAGCCTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: GSPDLTTSSSVHAPS*CPGLSGLKLCTSLR Trigger: TCGGAGGCTGGTACAAAGTTTTAGACCACTTAATCCCGGGCACCACGAAGGTGCATGCACTGAAGAAGATGTTGTTAGATCAGGACTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201171.4 |
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| CDS-3UTR CAA 90 bp | TGTCTATTCGTGGGTATATACATGTTTGTGCAGGTGCTTCAGAGGCCAGAAGAGTTCAGTTTGGCCCAATaGTCCTGGGCTGACATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CLFVGIYMFVQVLQRPEEFSLAQ*SWADIP Trigger: TGGAATGTCAGCCCAGGACAATTGGGCCAAACTGAA...CTCTTCTGGCCTCTGAAGCACCTGCACAAACATGTATATACCCACGAATAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000202241.4 |
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| CDS-3UTR CAA 90 bp | GGGTATATACATGTTTGTGCAGGTGCTTCAGAGGCCAGAAGAGAACATCAGATCAAGTGGTCTAAAACTTaGTACCAGCCTCCGACGACA | + |
|
Preference number: 5 (lower is better) Translates to: GYIHVCAGASEARREHQIKWSKT*YQPPTT Trigger: TGTCGTCGGAGGCTGGTACAAAGTTTTAGACCACTT...GATCTGATGTTCTCTTCTGGCCTCTGAAGCACCTGCACAAACATGTATATACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000201353.4 ENSMUST00000202241.4 |
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| CDS GCA 72 bp | GCCTGGTGTTGCTGGAGACCCCGCCTCTCCACCAGCTaGTGTGAGATCATGTCACCTACGCCCATCAGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: AWCCWRPRLSTS*CEIMSPTPISD Trigger: ATCACTGATGGGCGTAGGTGACATGATCTCACAGCAGCTGGTGGAGAGGCGGGGTCTCCAGCAACACCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000201491.2 ENSMUST00000202241.4 |
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| CDS CAA 90 bp | AGTGCATGCACCTTCGTGGTGCCCGGGATTAAGTGGTCTAAAACTTaGTACCAGCCTCCGACGACAGGGCCCACAAAGCCACAGCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SACTFVVPGIKWSKT*YQPPTTGPTKPQPR Trigger: CCTGGGCTGTGGCTTTGTGGGCCCTGTCGTCGGAGGCTGGTACAAAGTTTTAGACCACTTAATCCCGGGCACCACGAAGGTGCATGCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201171.4 ENSMUST00000201353.4 ENSMUST00000201491.2 ENSMUST00000202241.4 |
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| CDS GCA 72 bp | TCCAGCTGTCAGAACCTGGACTTTCCACGGATGTGCTaGCAGGGCTCTCTGGTATGCTCGCCAGAGTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: SSCQNLDFPRMC*QGSLVCSPECH Trigger: ATGGCACTCTGGCGAGCATACCAGAGAGCCCTGGCAGCACATCCGTGGAAAGTCCAGGTTCTGACAGCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000201491.2 ENSMUST00000202241.4 |
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| CDS CCA 72 bp | TCACCTACGCCCATCAGTGATCCAGCTGTCAGAACCTaGACTTTCCACGGATGTGCTGCCAGGGCTCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SPTPISDPAVRT*TFHGCAARALW Trigger: CCAGAGAGCCCTGGCAGCACATCCGTGGAAAGTCCAGGTTCTGACAGCTGGATCACTGATGGGCGTAGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000201491.2 ENSMUST00000202241.4 |
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| CDS CAA 72 bp | ACCTTCGTGGTGCCCGGGATTAAGTGGTCTAAAACTTaGTACCAGCCTCCGACGACAGGGCCCACAAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: TFVVPGIKWSKT*YQPPTTGPTKP Trigger: TGGCTTTGTGGGCCCTGTCGTCGGAGGCTGGTACAAAGTTTTAGACCACTTAATCCCGGGCACCACGAAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201171.4 ENSMUST00000201353.4 ENSMUST00000201491.2 ENSMUST00000202241.4 |
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| CDS CAA 90 bp | CAGAGCCGCTTCAGTTTGGCCCAATTGTCCTGGGCTGACATTCCATaGAGTATCCCGACCAGTGGGAGAAAGCAGCCTAGGAAACATGGG | + |
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Preference number: 6 (lower is better) Translates to: QSRFSLAQLSWADIP*SIPTSGRKQPRKHG Trigger: CCCATGTTTCCTAGGCTGCTTTCTCCCACTGGTCGGGATACTCAATGGAATGTCAGCCCAGGACAATTGGGCCAAACTGAAGCGGCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200744.4 |
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| CDS TCA 72 bp | CCAGAGCCGCTTCAGTTTGGCCCAATTGTCCTGGGCTaGCATTCCATTGAGTATCCCGACCAGTGGGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: PEPLQFGPIVLG*HSIEYPDQWEK Trigger: TTTCTCCCACTGGTCGGGATACTCAATGGAATGTCAGCCCAGGACAATTGGGCCAAACTGAAGCGGCTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200744.4 |
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| CDS CCA 72 bp | TTCAGTGCATGCACCTTCGTGGTGCCCGGGATTAAGTaGTCTAAAACTTTGTACCAGCCTCCGACGACAGGG | + |
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Preference number: 6 (lower is better) Translates to: FSACTFVVPGIK*SKTLYQPPTTG Trigger: CCCTGTCGTCGGAGGCTGGTACAAAGTTTTAGACCACTTAATCCCGGGCACCACGAAGGTGCATGCACTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201171.4 ENSMUST00000201353.4 ENSMUST00000201491.2 ENSMUST00000202241.4 |
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| CDS TCA 72 bp | GTAGTCCCGCTTCAGTTTGGCCCAATTGTCCTGGGCTaGCATTCCATTGAGTATCCCGACCAGTGGGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: VVPLQFGPIVLG*HSIEYPDQWEK Trigger: TTTCTCCCACTGGTCGGGATACTCAATGGAATGTCAGCCCAGGACAATTGGGCCAAACTGAAGCGGGACTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000154241.8 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000201491.2 ENSMUST00000202241.4 |
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| CDS CAA 72 bp | TTCAGTTTGGCCCAATTGTCCTGGGCTGACATTCCATaGAGTATCCCGACCAGTGGGAGAAAGCAGCCTAGG | + |
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Preference number: 6 (lower is better) Translates to: FSLAQLSWADIP*SIPTSGRKQPR Trigger: CCTAGGCTGCTTTCTCCCACTGGTCGGGATACTCAATGGAATGTCAGCCCAGGACAATTGGGCCAAACTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201353.4 ENSMUST00000201491.2 ENSMUST00000202241.4 |
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| CDS GCA 72 bp | CTAACAACATCTTCTTCAGTGCATGCACCTTCGTGGTaGCCGGGATTAAGTGGTCTAAAACTTTGTACCAGC | + |
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Preference number: 6 (lower is better) Translates to: LTTSSSVHAPSW*PGLSGLKLCTS Trigger: GCTGGTACAAAGTTTTAGACCACTTAATCCCGGGCACCACGAAGGTGCATGCACTGAAGAAGATGTTGTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201171.4 ENSMUST00000201353.4 ENSMUST00000201491.2 ENSMUST00000202241.4 |
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| CDS CCA 72 bp | GATCTAACAACATCTTCTTCAGTGCATGCACCTTCGTaGTGCCCGGGATTAAGTGGTCTAAAACTTTGTACC | + |
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Preference number: 6 (lower is better) Translates to: DLTTSSSVHAPS*CPGLSGLKLCT Trigger: GGTACAAAGTTTTAGACCACTTAATCCCGGGCACCACGAAGGTGCATGCACTGAAGAAGATGTTGTTAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000154241.8 ENSMUST00000200744.4 ENSMUST00000200833.4 ENSMUST00000200864.4 ENSMUST00000201171.4 ENSMUST00000201353.4 ENSMUST00000201491.2 ENSMUST00000202241.4 |
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