Pregenerated sensors for MPTX2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000079180

Ensembl transcript IDs: ENSMUST00000111224.5

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	CTTCAAGCCTTTTCTCCCAAATGCCTTTCCATTCAGCCAGAATTCTaGAATCCCAGAGCCAGACTCCCAGTTCACACAGATACGGACTGG	+
Preference number: 5 (lower is better) Translates to: LQAFSPKCLSIQPEF*NPRARLPVHTDTDW Trigger: CCAGTCCGTATCTGTGTGAACTGGGAGTCTGGCTCTGGGATTGCAGAATTCTGGCTGAATGGAAAGGCATTTGGGAGAAAAGGCTTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111224.5
CDS CCA 90 bp	TTCTGCAATCCCAGAGCCAGACTCCCAGTTCACACAGATACGGACTaGATCAGGAAGATTTGTGGGTGCTTTGAAACTGACTCCCGAATT	+
Preference number: 5 (lower is better) Translates to: FCNPRARLPVHTDTD*IRKICGCFETDSRI Trigger: AATTCGGGAGTCAGTTTCAAAGCACCCACAAATCTTCCTGATCCAGTCCGTATCTGTGTGAACTGGGAGTCTGGCTCTGGGATTGCAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111224.5
CDS CCA 72 bp	CCCAGAGCCAGACTCCCAGTTCACACAGATACGGACTaGATCAGGAAGATTTGTGGGTGCTTTGAAACTGAC	+
Preference number: 6 (lower is better) Translates to: PRARLPVHTDTD*IRKICGCFETD Trigger: GTCAGTTTCAAAGCACCCACAAATCTTCCTGATCCAGTCCGTATCTGTGTGAACTGGGAGTCTGGCTCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111224.5
CDS TCA 72 bp	TGTGAAGGCCTTTATACACAGAGTGAAGTTCTGCAGTaGCTTCCTCACCTTCGGTATCAGGGACACATAGGC	+
Preference number: 6 (lower is better) Translates to: CEGLYTQSEVLQ*LPHLRYQGHIG Trigger: GCCTATGTGTCCCTGATACCGAAGGTGAGGAAGTCACTGCAGAACTTCACTCTGTGTATAAAGGCCTTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111224.5
CDS GCA 72 bp	TTTTCTCCCAAATGCCTTTCCATTCAGCCAGAATTCTaGAATCCCAGAGCCAGACTCCCAGTTCACACAGAT	+
Preference number: 6 (lower is better) Translates to: FSPKCLSIQPEF*NPRARLPVHTD Trigger: ATCTGTGTGAACTGGGAGTCTGGCTCTGGGATTGCAGAATTCTGGCTGAATGGAAAGGCATTTGGGAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111224.5
CDS CAA 90 bp	TTTGGGCTTAGTCACCACATAGCCCCTGTCTTCATGAATAAGAGCTaGCCAGTTTATAATATTGCCATTGTTACAGCTGTCATGCACCTC	+
Preference number: 6 (lower is better) Translates to: FGLSHHIAPVFMNKS*PVYNIAIVTAVMHL Trigger: GAGGTGCATGACAGCTGTAACAATGGCAATATTATAAACTGGCAAGCTCTTATTCATGAAGACAGGGGCTATGTGGTGACTAAGCCCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111224.5
CDS CCA 72 bp	TATTGCCATTGTTACAGCTGTCATGCACCTCTTTTATaGGGACCACATAGTTCCACAAGGAAACATCCCATA	+
Preference number: 6 (lower is better) Translates to: YCHCYSCHAPLL*GPHSSTRKHPI Trigger: TATGGGATGTTTCCTTGTGGAACTATGTGGTCCCCATAAAAGAGGTGCATGACAGCTGTAACAATGGCAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111224.5
CDS CAA 72 bp	AGTCACCACATAGCCCCTGTCTTCATGAATAAGAGCTaGCCAGTTTATAATATTGCCATTGTTACAGCTGTC	+
Preference number: 6 (lower is better) Translates to: SHHIAPVFMNKS*PVYNIAIVTAV Trigger: GACAGCTGTAACAATGGCAATATTATAAACTGGCAAGCTCTTATTCATGAAGACAGGGGCTATGTGGTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111224.5

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