Pregenerated sensors for MPTX1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026531

Ensembl transcript IDs: ENSMUST00000027816.5

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	CTTCAAGCCTTTCCTCCCCAGTGGTTTTCCATTCAGCCAGAATTCTaGAATCCCAGAGCCAGACTCCCAGTTCACACAGATACGGGCCGG	+
Preference number: 5 (lower is better) Translates to: LQAFPPQWFSIQPEF*NPRARLPVHTDTGR Trigger: CCGGCCCGTATCTGTGTGAACTGGGAGTCTGGCTCTGGGATTGCAGAATTCTGGCTGAATGGAAAACCACTGGGGAGGAAAGGCTTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027816.5
CDS TCA 90 bp	GAAAATAAATGCCTTTCCCTTCATGTCTGTTTCTGCTACACTTCCTaGAAGAACAGAGAGAAACAGGATGCCCACAATAAGCTTCTCCAT	+
Preference number: 5 (lower is better) Translates to: ENKCLSLHVCFCYTS*KNREKQDAHNKLLH Trigger: ATGGAGAAGCTTATTGTGGGCATCCTGTTTCTCTCTGTTCTTTCAGGAAGTGTAGCAGAAACAGACATGAAGGGAAAGGCATTTATTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027816.5
CDS GCA 72 bp	TTTCCTCCCCAGTGGTTTTCCATTCAGCCAGAATTCTaGAATCCCAGAGCCAGACTCCCAGTTCACACAGAT	+
Preference number: 6 (lower is better) Translates to: FPPQWFSIQPEF*NPRARLPVHTD Trigger: ATCTGTGTGAACTGGGAGTCTGGCTCTGGGATTGCAGAATTCTGGCTGAATGGAAAACCACTGGGGAGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027816.5
CDS TCA 72 bp	AGATACGGGCCGGATCAGGAAGATTTGTGGGTGCTTTaGAAGTGGCTACCATATTCCCAACATAGAACATGT	+
Preference number: 6 (lower is better) Translates to: RYGPDQEDLWVL*KWLPYSQHRTC Trigger: ACATGTTCTATGTTGGGAATATGGTAGCCACTTTCAAAGCACCCACAAATCTTCCTGATCCGGCCCGTATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027816.5

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