Pregenerated sensors for MPST (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071711Ensembl transcript IDs: ENSMUST00000043865.8, ENSMUST00000167140.8, ENSMUST00000169133.8, ENSMUST00000229739.2, ENSMUST00000229791.2, ENSMUST00000231159.2
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTCCCTCCCTCCCCTGGGTACCCTCTTACTGCCTGCCACCTTCTTaGCTACCTCAGCTGAGTATCTATGAGTCACTGGAACTCCAGGTC | + |
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Preference number: 1 (lower is better) Translates to: PPSLPWVPSYCLPPS*LPQLSIYESLELQV Trigger: GACCTGGAGTTCCAGTGACTCATAGATACTCAGCTGAGGTAGCCAAGAAGGTGGCAGGCAGTAAGAGGGTACCCAGGGGAGGGAGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| 3UTR CCA 90 bp | CTGAGAAAGGACTCTTGGCAAAGCAGGGTCAGAGTGACCAGTGGCTaGTACTGTGATGGTCAGATGTCACCCAAGCTGCACTGTGTCCTG | + |
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Preference number: 1 (lower is better) Translates to: LRKDSWQSRVRVTSG*YCDGQMSPKLHCVL Trigger: CAGGACACAGTGCAGCTTGGGTGACATCTGACCATCACAGTACCAGCCACTGGTCACTCTGACCCTGCTTTGCCAAGAGTCCTTTCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| 3UTR TCA 90 bp | CCTGGGTACCCTCTTACTGCCTGCCACCTTCTTGGCTACCTCAGCTaGGTATCTATGAGTCACTGGAACTCCAGGTCTCTGGGATATCAC | + |
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Preference number: 1 (lower is better) Translates to: PGYPLTACHLLGYLS*VSMSHWNSRSLGYH Trigger: GTGATATCCCAGAGACCTGGAGTTCCAGTGACTCATAGATACTCAGCTGAGGTAGCCAAGAAGGTGGCAGGCAGTAAGAGGGTACCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCCTGGGTACCCTCTTACTGAGATGTCACCCAAGCTaGACTGTGTCCTGCCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: SLPPFLPPSLPPLGTLLLRCHPS*TVSCLA Trigger: AGCCAGGCAGGACACAGTGCAGCTTGGGTGACATCT...CAGTAAGAGGGTACCCAGGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGAAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCCTGGGTACCCTCTTACTGCAGTGGCTGGTACTGTaGTGGTCAGATGTCACCCAA | + |
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Preference number: 2 (lower is better) Translates to: SLPPFLPPSLPPLGTLLLQWLVL*WSDVTQ Trigger: TTGGGTGACATCTGACCATCACAGTACCAGCCACTG...CAGTAAGAGGGTACCCAGGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGAAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCCTGGGTACCCTCTTACTGCCTTGGCTACCTCAGCTaGGTATCTATGAGTCACTGG | + |
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Preference number: 2 (lower is better) Translates to: PFLPSSLPPSLPWVPSYCLGYLS*VSMSHW Trigger: CCAGTGACTCATAGATACTCAGCTGAGGTAGCCAAG...GCAGTAAGAGGGTACCCAGGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGAAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCTCCCTCCCTCCCCTGGGTACCCTCTTACTGCCTGCCACCTTCTTGGCTACAGATGTCACCCAAGCTaGACTGTGTCCTGCCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: SLPPSPGYPLTACHLLGYRCHPS*TVSCLA Trigger: AGCCAGGCAGGACACAGTGCAGCTTGGGTGACATCT...GTAGCCAAGAAGGTGGCAGGCAGTAAGAGGGTACCCAGGGGAGGGAGGGAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCCTGGGTACCCTCTTACTGCCAGAGTGACCAGTGGCTaGTACTGTGATGGTCAGATG | + |
|
Preference number: 2 (lower is better) Translates to: PSSLPPSLPPSPGYPLTARVTSG*YCDGQM Trigger: CATCTGACCATCACAGTACCAGCCACTGGTCACTCT...GGCAGTAAGAGGGTACCCAGGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCCCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCCTGGGTACCCTCTTACACTCCCTCAGTTGTCTaGGAAAGGACTCTTGGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: PPFLPSSLPPSLPWVPSYTPSVV*ERTLGK Trigger: TTTGCCAAGAGTCCTTTCTCAGACAACTGAGGGAGT...GTAAGAGGGTACCCAGGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGAAGGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCTCCCCTGGGTACCCTCTTACTGCCTGCCACCTTCTTGGCTACCTCAGCTGAGATGTCACCCAAGCTaGACTGTGTCCTGCCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: SLPWVPSYCLPPSWLPQLRCHPS*TVSCLA Trigger: AGCCAGGCAGGACACAGTGCAGCTTGGGTGACATCT...CAGCTGAGGTAGCCAAGAAGGTGGCAGGCAGTAAGAGGGTACCCAGGGGAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCCTGGGTACCCTCTTACTAGAGTGACCAGTGGCTaGTACTGTGATGGTCAGATG | + |
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Preference number: 2 (lower is better) Translates to: LPSSLPPSLPPSPGYPLTRVTSG*YCDGQM Trigger: CATCTGACCATCACAGTACCAGCCACTGGTCACTCT...AGTAAGAGGGTACCCAGGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGAAGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCCTGGGTACCCTCTTACTGCTGAGAAAGGACTCTTaGCAAAGCAGGGTCAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: SLPPFLPPSLPPLGTLLLLRKDS*QSRVRV Trigger: CACTCTGACCCTGCTTTGCCAAGAGTCCTTTCTCAG...CAGTAAGAGGGTACCCAGGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGAAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCCCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCCTGGGTACCCTCTTACGTATCTATGAGTCACTaGAACTCCAGGTCTCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: PPFLPSSLPPSLPWVPSYVSMSH*NSRSLG Trigger: TCCCAGAGACCTGGAGTTCCAGTGACTCATAGATAC...GTAAGAGGGTACCCAGGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGAAGGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCCTGGGTACCCTCTTACTACTCCCTCAGTTGTCTaGGAAAGGACTCTTGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: LPSSLPPSLPPSPGYPLTTPSVV*ERTLGK Trigger: TTTGCCAAGAGTCCTTTCTCAGACAACTGAGGGAGT...AGTAAGAGGGTACCCAGGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGAAGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCTTAGCACCGTGCAAGCTGTTTTGCTATCTGGCCTCCCTCCCTTCCTCCCTTGCCTGCCACCTTCTTaGCTACCTCAGCTGAGTATC | + |
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Preference number: 2 (lower is better) Translates to: QLSTVQAVLLSGLPPFLPCLPPS*LPQLSI Trigger: GATACTCAGCTGAGGTAGCCAAGAAGGTGGCAGGCA...AGGGAGGAAGGGAGGGAGGCCAGATAGCAAAACAGCTTGCACGGTGCTAAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAACTCCAGGTCTCTGGGATATCACCCCAAACACTCCCTCAGTTGTCTGAGAAAAGCAGGGTCAGAGTaGCCAGTGGCTGGTACTGTG | + |
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Preference number: 2 (lower is better) Translates to: WNSRSLGYHPKHSLSCLRKAGSE*PVAGTV Trigger: CACAGTACCAGCCACTGGTCACTCTGACCCTGCTTT...TCTCAGACAACTGAGGGAGTGTTTGGGGTGATATCCCAGAGACCTGGAGTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| 3UTR-3UTR GCA 90 bp | CAAACACTCCCTCAGTTGTCTGAGAAAGGACTCTTGGCAAAGCAGGGTCAGAGTAGATGTCACCCAAGCTaGACTGTGTCCTGCCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: QTLPQLSEKGLLAKQGQSRCHPS*TVSCLA Trigger: AGCCAGGCAGGACACAGTGCAGCTTGGGTGACATCT...ACTCTGACCCTGCTTTGCCAAGAGTCCTTTCTCAGACAACTGAGGGAGTGTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAACTCCAGGTCTCTGGGATATCACCCCAAACACTCCCTCAGTTGTCTGAGAAGAGTGACCAGTGGCTaGTACTGTGATGGTCAGATG | + |
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Preference number: 2 (lower is better) Translates to: WNSRSLGYHPKHSLSCLRRVTSG*YCDGQM Trigger: CATCTGACCATCACAGTACCAGCCACTGGTCACTCT...TCTCAGACAACTGAGGGAGTGTTTGGGGTGATATCCCAGAGACCTGGAGTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| 3UTR GCA 72 bp | TCCCTCCCTCCCTCCCTCCCCTGGGTACCCTCTTACTaGCTGCCACCTTCTTGGCTACCTCAGCTGAGTATC | + |
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Preference number: 3 (lower is better) Translates to: SLPPSLPWVPSY*LPPSWLPQLSI Trigger: GATACTCAGCTGAGGTAGCCAAGAAGGTGGCAGGCAGTAAGAGGGTACCCAGGGGAGGGAGGGAGGGAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| 3UTR-3UTR CAA 90 bp | CCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCCTGGGTACCCTCTTACTGCCTCTGAGAAAGGACTCTaGGCAAAGCAGGGTCAGAGT | + |
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Preference number: 3 (lower is better) Translates to: PSSLPPSLPPSPGYPLTASEKGL*AKQGQS Trigger: ACTCTGACCCTGCTTTGCCAAGAGTCCTTTCTCAGA...GGCAGTAAGAGGGTACCCAGGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| 3UTR TCA 72 bp | GCAAAGCAGGGTCAGAGTGACCAGTGGCTGGTACTGTaGTGGTCAGATGTCACCCAAGCTGCACTGTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: AKQGQSDQWLVL*WSDVTQAALCP Trigger: AGGACACAGTGCAGCTTGGGTGACATCTGACCATCACAGTACCAGCCACTGGTCACTCTGACCCTGCTTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| 3UTR CCA 72 bp | GACTCTTGGCAAAGCAGGGTCAGAGTGACCAGTGGCTaGTACTGTGATGGTCAGATGTCACCCAAGCTGCAC | + |
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Preference number: 3 (lower is better) Translates to: DSWQSRVRVTSG*YCDGQMSPKLH Trigger: GTGCAGCTTGGGTGACATCTGACCATCACAGTACCAGCCACTGGTCACTCTGACCCTGCTTTGCCAAGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| 3UTR-3UTR CAA 90 bp | CAGCTTAGCACCGTGCAAGCTGTTTTGCTATCTGGCCTCCCTCCCTTCCTCCCTTCTGAGAAAGGACTCTaGGCAAAGCAGGGTCAGAGT | + |
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Preference number: 3 (lower is better) Translates to: QLSTVQAVLLSGLPPFLPSEKGL*AKQGQS Trigger: ACTCTGACCCTGCTTTGCCAAGAGTCCTTTCTCAGA...AGGGAGGAAGGGAGGGAGGCCAGATAGCAAAACAGCTTGCACGGTGCTAAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| 3UTR CCA 72 bp | CTCCCCTGGGTACCCTCTTACTGCCTGCCACCTTCTTaGCTACCTCAGCTGAGTATCTATGAGTCACTGGAA | + |
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Preference number: 3 (lower is better) Translates to: LPWVPSYCLPPS*LPQLSIYESLE Trigger: TTCCAGTGACTCATAGATACTCAGCTGAGGTAGCCAAGAAGGTGGCAGGCAGTAAGAGGGTACCCAGGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| 3UTR TCA 72 bp | CCTGCCACCTTCTTGGCTACCTCAGCTGAGTATCTATaGGTCACTGGAACTCCAGGTCTCTGGGATATCACC | + |
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Preference number: 3 (lower is better) Translates to: PATFLATSAEYL*VTGTPGLWDIT Trigger: GGTGATATCCCAGAGACCTGGAGTTCCAGTGACTCATAGATACTCAGCTGAGGTAGCCAAGAAGGTGGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| 3UTR TCA 72 bp | CCTCTTACTGCCTGCCACCTTCTTGGCTACCTCAGCTaGGTATCTATGAGTCACTGGAACTCCAGGTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: PLTACHLLGYLS*VSMSHWNSRSL Trigger: CAGAGACCTGGAGTTCCAGTGACTCATAGATACTCAGCTGAGGTAGCCAAGAAGGTGGCAGGCAGTAAGAGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR GCA 90 bp | CCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCCTGGGTACCCTCTTACTGCCGCCTCCGCCACCCACTaGGCAGACACCAGAGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: PSSLPPSLPPSPGYPLTAASATH*ADTRAR Trigger: CCGAGCTCTGGTGTCTGCGCAGTGGGTGGCGGAGGC...GGCAGTAAGAGGGTACCCAGGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGAAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CCA 90 bp | CCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCCTGGGTACCCTCTTACTGCCGCCCCCAGGACCACGTaGCAGGCTGTGACACCGGAG | + |
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Preference number: 4 (lower is better) Translates to: PSSLPPSLPPSPGYPLTAAPRTT*QAVTPE Trigger: CTCCGGTGTCACAGCCTGCCACGTGGTCCTGGGGGC...GGCAGTAAGAGGGTACCCAGGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGAAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR GCA 90 bp | TCCCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCCTGGGTACCCTCTTACTGGCCTCCGCCACCCACTaGGCAGACACCAGAGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: SLPPFLPPSLPPLGTLLLASATH*ADTRAR Trigger: CCGAGCTCTGGTGTCTGCGCAGTGGGTGGCGGAGGC...CAGTAAGAGGGTACCCAGGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGAAGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CCA 90 bp | CCTCCCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCCTGGGTACCCTCTTACAGATCACGACGTGCGTaGCGGCGCTCACGCCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: PPFLPSSLPPSLPWVPSYRSRRA*RRSRPS Trigger: GCTTGGGCGTGAGCGCCGCCACGCACGTCGTGATCT...GTAAGAGGGTACCCAGGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGAAGGGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CCA 90 bp | CTCCCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCCTGGGTACCCTCTTACTAGATCACGACGTGCGTaGCGGCGCTCACGCCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: LPSSLPPSLPPSPGYPLTRSRRA*RRSRPS Trigger: GCTTGGGCGTGAGCGCCGCCACGCACGTCGTGATCT...AGTAAGAGGGTACCCAGGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGAAGGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CCA 90 bp | CTCCCTCCCTCCCCTGGGTACCCTCTTACTGCCTGCCACCTTCTTGGCTACCTCCGGGCGTCCACCACCTaGAAGCGCCGGGCATCCAAG | + |
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Preference number: 4 (lower is better) Translates to: LPPSPGYPLTACHLLGYLRASTT*KRRASK Trigger: CTTGGATGCCCGGCGCTTCCAGGTGGTGGACGCCCG...GAGGTAGCCAAGAAGGTGGCAGGCAGTAAGAGGGTACCCAGGGGAGGGAGGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CCA 90 bp | TCCCTCCCTCCCTCCCCTGGGTACCCTCTTACTGCCTGCCACCTTCTTGGCTACGCCCCCAGGACCACGTaGCAGGCTGTGACACCGGAG | + |
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Preference number: 4 (lower is better) Translates to: SLPPSPGYPLTACHLLGYAPRTT*QAVTPE Trigger: CTCCGGTGTCACAGCCTGCCACGTGGTCCTGGGGGC...GTAGCCAAGAAGGTGGCAGGCAGTAAGAGGGTACCCAGGGGAGGGAGGGAGGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CCA 90 bp | TCCCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCCTGGGTACCCTCTTACTGCATCGCGGCCCAGCTTaGGTAGGTACCAGGACGCGT | + |
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Preference number: 4 (lower is better) Translates to: SLPPFLPPSLPPLGTLLLHRGPA*VGTRTR Trigger: ACGCGTCCTGGTACCTACCCAAGCTGGGCCGCGATG...CAGTAAGAGGGTACCCAGGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGAAGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CCA 90 bp | CCTCCCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCCTGGGTACCCTCTTACGCCATCTCGGGGTTCTaGCTGGGTGCCTTGGAAACG | + |
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Preference number: 4 (lower is better) Translates to: PPFLPSSLPPSLPWVPSYAISGF*LGALET Trigger: CGTTTCCAAGGCACCCAGCCAGAACCCCGAGATGGC...GTAAGAGGGTACCCAGGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGAAGGGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR GCA 90 bp | CTCCCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCCTGGGTACCCTCTTACTCAGGCACGTCTGACTTaGCACAGAGGAAGGCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: LPSSLPPSLPPSPGYPLTQARLT*HRGRPP Trigger: TGGGGGCCTTCCTCTGTGGCAAGTCAGACGTGCCTG...AGTAAGAGGGTACCCAGGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGAAGGGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CCA 90 bp | CTCCCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCCTGGGTACCCTCTTACTGCCATCTCGGGGTTCTaGCTGGGTGCCTTGGAAACG | + |
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Preference number: 4 (lower is better) Translates to: LPSSLPPSLPPSPGYPLTAISGF*LGALET Trigger: CGTTTCCAAGGCACCCAGCCAGAACCCCGAGATGGC...AGTAAGAGGGTACCCAGGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGAAGGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR TCA 90 bp | CCCCTGGGTACCCTCTTACTGCCTGCCACCTTCTTGGCTACCTCAGCTGAGTATCCACGTGGCAGGCTGTaGCACCGGAGCCACACGTGG | + |
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Preference number: 4 (lower is better) Translates to: PLGTLLLPATFLATSAEYPRGRL*HRSHTW Trigger: CCACGTGTGGCTCCGGTGTCACAGCCTGCCACGTGG...ATACTCAGCTGAGGTAGCCAAGAAGGTGGCAGGCAGTAAGAGGGTACCCAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CCA 90 bp | CCCCTGGGTACCCTCTTACTGCCTGCCACCTTCTTGGCTACCTCAGCTGAGTATCGGGCGTCCACCACCTaGAAGCGCCGGGCATCCAAG | + |
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Preference number: 4 (lower is better) Translates to: PLGTLLLPATFLATSAEYRASTT*KRRASK Trigger: CTTGGATGCCCGGCGCTTCCAGGTGGTGGACGCCCG...ATACTCAGCTGAGGTAGCCAAGAAGGTGGCAGGCAGTAAGAGGGTACCCAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CCA 90 bp | TCCCTCCCTCCCTCCCCTGGGTACCCTCTTACTGCCTGCCACCTTCTTGGCTACAGCAATGACACAGAGTaGTGGCCGAAGGCGCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SLPPSPGYPLTACHLLGYSNDTE*WPKARN Trigger: GTTCCGCGCCTTCGGCCACCACTCTGTGTCATTGCT...GTAGCCAAGAAGGTGGCAGGCAGTAAGAGGGTACCCAGGGGAGGGAGGGAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS-3UTR CCA 90 bp | CCCCTGGGTACCCTCTTACTGCCTGCCACCTTCTTGGCTACCTCAGCTGAGTATTCTGGCTGGGTGCCTTaGAAACGGCCAGCTGCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PLGTLLLPATFLATSAEYSGWVP*KRPAAR Trigger: CCGCGCAGCTGGCCGTTTCCAAGGCACCCAGCCAGA...ATACTCAGCTGAGGTAGCCAAGAAGGTGGCAGGCAGTAAGAGGGTACCCAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CCA 90 bp | TCCCTCCCCTGGGTACCCTCTTACTGCCTGCCACCTTCTTGGCTACCTCAGCTGGCCATCTCGGGGTTCTaGCTGGGTGCCTTGGAAACG | + |
|
Preference number: 4 (lower is better) Translates to: SLPWVPSYCLPPSWLPQLAISGF*LGALET Trigger: CGTTTCCAAGGCACCCAGCCAGAACCCCGAGATGGC...CAGCTGAGGTAGCCAAGAAGGTGGCAGGCAGTAAGAGGGTACCCAGGGGAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS-3UTR GCA 90 bp | CTCAGTTGTCTGAGAAAGGACTCTTGGCAAAGCAGGGTCAGAGTGACCAGTGGCGCCTCCGCCACCCACTaGGCAGACACCAGAGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LSCLRKDSWQSRVRVTSGASATH*ADTRAR Trigger: CCGAGCTCTGGTGTCTGCGCAGTGGGTGGCGGAGGC...GCCACTGGTCACTCTGACCCTGCTTTGCCAAGAGTCCTTTCTCAGACAACTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR GCA 90 bp | CACTCCCTCAGTTGTCTGAGAAAGGACTCTTGGCAAAGCAGGGTCAGAGTGACCGCCTCCGCCACCCACTaGGCAGACACCAGAGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: HSLSCLRKDSWQSRVRVTASATH*ADTRAR Trigger: CCGAGCTCTGGTGTCTGCGCAGTGGGTGGCGGAGGC...GGTCACTCTGACCCTGCTTTGCCAAGAGTCCTTTCTCAGACAACTGAGGGAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CCA 90 bp | CCCCTGGGTACCCTCTTACTGCCTGCCACCTTCTTGGCTACCTCAGCTGAGTATCATCGCGGCCCAGCTTaGGTAGGTACCAGGACGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PLGTLLLPATFLATSAEYHRGPA*VGTRTR Trigger: ACGCGTCCTGGTACCTACCCAAGCTGGGCCGCGATG...ATACTCAGCTGAGGTAGCCAAGAAGGTGGCAGGCAGTAAGAGGGTACCCAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CCA 90 bp | CCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCCTGGGTACCCTCTTACTGCCTCCAGGATGTCCTCGTaGGTCTTGATGAAAGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSSLPPSLPPSPGYPLTASRMSS*VLMKEG Trigger: TCCCTCTTTCATCAAGACCCACGAGGACATCCTGGA...GGCAGTAAGAGGGTACCCAGGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS-3UTR CCA 90 bp | CAGTTGTCTGAGAAAGGACTCTTGGCAAAGCAGGGTCAGAGTGACCAGTGGCTGCGGGCGTCCACCACCTaGAAGCGCCGGGCATCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QLSEKGLLAKQGQSDQWLRASTT*KRRASK Trigger: CTTGGATGCCCGGCGCTTCCAGGTGGTGGACGCCCG...CAGCCACTGGTCACTCTGACCCTGCTTTGCCAAGAGTCCTTTCTCAGACAACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS-3UTR CCA 90 bp | AGTTGTCTGAGAAAGGACTCTTGGCAAAGCAGGGTCAGAGTGACCAGTGGCTGGCGGGCGTCCACCACCTaGAAGCGCCGGGCATCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SCLRKDSWQSRVRVTSGWRASTT*KRRASK Trigger: CTTGGATGCCCGGCGCTTCCAGGTGGTGGACGCCCG...CCAGCCACTGGTCACTCTGACCCTGCTTTGCCAAGAGTCCTTTCTCAGACAACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCCTGGGTACCCTCTTACATGATATGCTCTGGCTaGGCACGCATGTACCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: PPFLPSSLPPSLPWVPSYMICSG*ARMYHS Trigger: AGAGTGGTACATGCGTGCCCAGCCAGAGCATATCAT...GTAAGAGGGTACCCAGGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGAAGGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS-3UTR CCA 90 bp | CCCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCCTGGGTACCCTCTTACTGCATGATATGCTCTGGCTaGGCACGCATGTACCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: PFLPSSLPPSLPWVPSYCMICSG*ARMYHS Trigger: AGAGTGGTACATGCGTGCCCAGCCAGAGCATATCAT...GCAGTAAGAGGGTACCCAGGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGAAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS-3UTR CCA 90 bp | CTCCCTCCCTCCCTCCCTCCCCTGGGTACCCTCTTACTGCCTGCCACCTTCTTGTTTGCCGGAGCTGATTaGCAGGTTCTGATTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPPSLPPLGTLLLPATFLFAGAD*QVLIQP Trigger: TGGCTGAATCAGAACCTGCCAATCAGCTCCGGCAAA...CAAGAAGGTGGCAGGCAGTAAGAGGGTACCCAGGGGAGGGAGGGAGGGAGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CCA 90 bp | TCCCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCCTGGGTACCCTCTTACTGTCCAGGATGTCCTCGTaGGTCTTGATGAAAGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLPPFLPPSLPPLGTLLLSRMSS*VLMKEG Trigger: TCCCTCTTTCATCAAGACCCACGAGGACATCCTGGA...CAGTAAGAGGGTACCCAGGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGAAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CCA 90 bp | AGTTGTCTGAGAAAGGACTCTTGGCAAAGCAGGGTCAGAGTGACCAGTGGCTGGTCTGGCTGGGTGCCTTaGAAACGGCCAGCTGCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SCLRKDSWQSRVRVTSGWSGWVP*KRPAAR Trigger: CCGCGCAGCTGGCCGTTTCCAAGGCACCCAGCCAGA...CCAGCCACTGGTCACTCTGACCCTGCTTTGCCAAGAGTCCTTTCTCAGACAACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CCA 90 bp | TGGAACTCCAGGTCTCTGGGATATCACCCCAAACACTCCCTCAGTTGTCTGAGAGCCCCCAGGACCACGTaGCAGGCTGTGACACCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WNSRSLGYHPKHSLSCLRAPRTT*QAVTPE Trigger: CTCCGGTGTCACAGCCTGCCACGTGGTCCTGGGGGC...TCTCAGACAACTGAGGGAGTGTTTGGGGTGATATCCCAGAGACCTGGAGTTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CCA 90 bp | TCCCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCCTGGGTACCCTCTTACTGAGAGATGATATGCTCTaGCTGGGCACGCATGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: SLPPFLPPSLPPLGTLLLRDDML*LGTHVP Trigger: TGGTACATGCGTGCCCAGCCAGAGCATATCATCTCT...CAGTAAGAGGGTACCCAGGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGAAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS-3UTR GCA 90 bp | TTGTCTGAGAAAGGACTCTTGGCAAAGCAGGGTCAGAGTGACCAGTGGCTGGTATTGGAAACGGCCAGCTaGGCGGGCGTCCACCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSEKGLLAKQGQSDQWLVLETAS*AGVHHL Trigger: CAGGTGGTGGACGCCCGCGCAGCTGGCCGTTTCCAA...TACCAGCCACTGGTCACTCTGACCCTGCTTTGCCAAGAGTCCTTTCTCAGACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR GCA 90 bp | GGCTGGTACTGTGATGGTCAGATGTCACCCAAGCTGCACTGTGTCCTGCCTGGCCCCTCAGAGATGATATaGTCTGGCTGGGCACGCATG | + |
|
Preference number: 4 (lower is better) Translates to: GWYCDGQMSPKLHCVLPGPSEMI*SGWARM Trigger: CATGCGTGCCCAGCCAGAGCATATCATCTCTGAGGG...GCCAGGCAGGACACAGTGCAGCTTGGGTGACATCTGACCATCACAGTACCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CCA 90 bp | CAGTTGTCTGAGAAAGGACTCTTGGCAAAGCAGGGTCAGAGTGACCAGTGGCTGCATCGCGGCCCAGCTTaGGTAGGTACCAGGACGCGT | + |
|
Preference number: 4 (lower is better) Translates to: QLSEKGLLAKQGQSDQWLHRGPA*VGTRTR Trigger: ACGCGTCCTGGTACCTACCCAAGCTGGGCCGCGATG...CAGCCACTGGTCACTCTGACCCTGCTTTGCCAAGAGTCCTTTCTCAGACAACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CCA 90 bp | CAGCTTAGCACCGTGCAAGCTGTTTTGCTATCTGGCCTCCCTCCCTTCCTCCCTAGCAATGACACAGAGTaGTGGCCGAAGGCGCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QLSTVQAVLLSGLPPFLPSNDTE*WPKARN Trigger: GTTCCGCGCCTTCGGCCACCACTCTGTGTCATTGCT...AGGGAGGAAGGGAGGGAGGCCAGATAGCAAAACAGCTTGCACGGTGCTAAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CCA 90 bp | GTACCCTCTTACTGCCTGCCACCTTCTTGGCTACCTCAGCTGAGTATCTATGAGTCTGGCTGGGTGCCTTaGAAACGGCCAGCTGCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VPSYCLPPSWLPQLSIYESGWVP*KRPAAR Trigger: CCGCGCAGCTGGCCGTTTCCAAGGCACCCAGCCAGA...CTCATAGATACTCAGCTGAGGTAGCCAAGAAGGTGGCAGGCAGTAAGAGGGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR GCA 90 bp | CAGCTTAGCACCGTGCAAGCTGTTTTGCTATCTGGCCTCCCTCCCTTCCTCCCTCCCTCAGAGATGATATaGTCTGGCTGGGCACGCATG | + |
|
Preference number: 4 (lower is better) Translates to: QLSTVQAVLLSGLPPFLPPSEMI*SGWARM Trigger: CATGCGTGCCCAGCCAGAGCATATCATCTCTGAGGG...AGGGAGGAAGGGAGGGAGGCCAGATAGCAAAACAGCTTGCACGGTGCTAAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CCA 90 bp | ATATCACCCCAAACACTCCCTCAGTTGTCTGAGAAAGGACTCTTGGCAAAGCAGGCGGCGCCCGGGATGTaGCGCTCCTCAAACTCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: ISPQTLPQLSEKGLLAKQAAPGM*RSSNSR Trigger: ACGCGAGTTTGAGGAGCGCCACATCCCGGGCGCCGC...CTGCTTTGCCAAGAGTCCTTTCTCAGACAACTGAGGGAGTGTTTGGGGTGATAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CCA 90 bp | CAAACACTCCCTCAGTTGTCTGAGAAAGGACTCTTGGCAAAGCAGGGTCAGAGTAGATCACGACGTGCGTaGCGGCGCTCACGCCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QTLPQLSEKGLLAKQGQSRSRRA*RRSRPS Trigger: GCTTGGGCGTGAGCGCCGCCACGCACGTCGTGATCT...ACTCTGACCCTGCTTTGCCAAGAGTCCTTTCTCAGACAACTGAGGGAGTGTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CCA 90 bp | CCTTCTTGGCTACCTCAGCTGAGTATCTATGAGTCACTGGAACTCCAGGTCTCTAGATCACGACGTGCGTaGCGGCGCTCACGCCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSWLPQLSIYESLELQVSRSRRA*RRSRPS Trigger: GCTTGGGCGTGAGCGCCGCCACGCACGTCGTGATCT...AGAGACCTGGAGTTCCAGTGACTCATAGATACTCAGCTGAGGTAGCCAAGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CCA 90 bp | CTCCCTCCCCTGGGTACCCTCTTACTGCCTGCCACCTTCTTGGCTACCTCAGCTTTTGCCGGAGCTGATTaGCAGGTTCTGATTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPPLGTLLLPATFLATSAFAGAD*QVLIQP Trigger: TGGCTGAATCAGAACCTGCCAATCAGCTCCGGCAAA...AGCTGAGGTAGCCAAGAAGGTGGCAGGCAGTAAGAGGGTACCCAGGGGAGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CCA 90 bp | GTCTCTGGGATATCACCCCAAACACTCCCTCAGTTGTCTGAGAAAGGACTCTTGTCTGGCTGGGTGCCTTaGAAACGGCCAGCTGCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VSGISPQTLPQLSEKGLLSGWVP*KRPAAR Trigger: CCGCGCAGCTGGCCGTTTCCAAGGCACCCAGCCAGA...CAAGAGTCCTTTCTCAGACAACTGAGGGAGTGTTTGGGGTGATATCCCAGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CCA 90 bp | ATATCACCCCAAACACTCCCTCAGTTGTCTGAGAAAGGACTCTTGGCAAAGCAGGCCCCCAGGACCACGTaGCAGGCTGTGACACCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ISPQTLPQLSEKGLLAKQAPRTT*QAVTPE Trigger: CTCCGGTGTCACAGCCTGCCACGTGGTCCTGGGGGC...CTGCTTTGCCAAGAGTCCTTTCTCAGACAACTGAGGGAGTGTTTGGGGTGATAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR GCA 90 bp | CCCAAACACTCCCTCAGTTGTCTGAGAAAGGACTCTTGGCAAAGCAGGGTCAGACAGGCACGTCTGACTTaGCACAGAGGAAGGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PKHSLSCLRKDSWQSRVRQARLT*HRGRPP Trigger: TGGGGGCCTTCCTCTGTGGCAAGTCAGACGTGCCTG...TCTGACCCTGCTTTGCCAAGAGTCCTTTCTCAGACAACTGAGGGAGTGTTTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CCA 90 bp | GTCTCTGGGATATCACCCCAAACACTCCCTCAGTTGTCTGAGAAAGGACTCTTGCATCGCGGCCCAGCTTaGGTAGGTACCAGGACGCGT | + |
|
Preference number: 4 (lower is better) Translates to: VSGISPQTLPQLSEKGLLHRGPA*VGTRTR Trigger: ACGCGTCCTGGTACCTACCCAAGCTGGGCCGCGATG...CAAGAGTCCTTTCTCAGACAACTGAGGGAGTGTTTGGGGTGATATCCCAGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CCA 90 bp | CACTCCCTCAGTTGTCTGAGAAAGGACTCTTGGCAAAGCAGGGTCAGAGTGACCAGCAATGACACAGAGTaGTGGCCGAAGGCGCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HSLSCLRKDSWQSRVRVTSNDTE*WPKARN Trigger: GTTCCGCGCCTTCGGCCACCACTCTGTGTCATTGCT...GGTCACTCTGACCCTGCTTTGCCAAGAGTCCTTTCTCAGACAACTGAGGGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CCA 90 bp | TGGAACTCCAGGTCTCTGGGATATCACCCCAAACACTCCCTCAGTTGTCTGAGAGCCATCTCGGGGTTCTaGCTGGGTGCCTTGGAAACG | + |
|
Preference number: 4 (lower is better) Translates to: WNSRSLGYHPKHSLSCLRAISGF*LGALET Trigger: CGTTTCCAAGGCACCCAGCCAGAACCCCGAGATGGC...TCTCAGACAACTGAGGGAGTGTTTGGGGTGATATCCCAGAGACCTGGAGTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR TCA 90 bp | CTCAGTTGTCTGAGAAAGGACTCTTGGCAAAGCAGGGTCAGAGTGACCAGTGGCCTGATTGGCAGGTTCTaGTTCAGCCAGTGGCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSCLRKDSWQSRVRVTSGLIGRF*FSQWRK Trigger: CTTCCGCCACTGGCTGAATCAGAACCTGCCAATCAG...GCCACTGGTCACTCTGACCCTGCTTTGCCAAGAGTCCTTTCTCAGACAACTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS-3UTR TCA 90 bp | AGTTGTCTGAGAAAGGACTCTTGGCAAAGCAGGGTCAGAGTGACCAGTGGCTGGCTGATTGGCAGGTTCTaGTTCAGCCAGTGGCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SCLRKDSWQSRVRVTSGWLIGRF*FSQWRK Trigger: CTTCCGCCACTGGCTGAATCAGAACCTGCCAATCAG...CCAGCCACTGGTCACTCTGACCCTGCTTTGCCAAGAGTCCTTTCTCAGACAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR GCA 90 bp | GTCTCTGGGATATCACCCCAAACACTCCCTCAGTTGTCTGAGAAAGGACTCTTGCAGGCACGTCTGACTTaGCACAGAGGAAGGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSGISPQTLPQLSEKGLLQARLT*HRGRPP Trigger: TGGGGGCCTTCCTCTGTGGCAAGTCAGACGTGCCTG...CAAGAGTCCTTTCTCAGACAACTGAGGGAGTGTTTGGGGTGATATCCCAGAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGTTGTCTGAGAAAGGACTCTTGGCAAAGCAGGGTCAGAGTGACCAGTGGCAATGACACAGAGTGGTaGCCGAAGGCGCGGAACATC | + |
|
Preference number: 4 (lower is better) Translates to: LSCLRKDSWQSRVRVTSGNDTEW*PKARNI Trigger: GATGTTCCGCGCCTTCGGCCACCACTCTGTGTCATT...GCCACTGGTCACTCTGACCCTGCTTTGCCAAGAGTCCTTTCTCAGACAACTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS-3UTR CCA 90 bp | CACTCCCTCAGTTGTCTGAGAAAGGACTCTTGGCAAAGCAGGGTCAGAGTGACCAATGACACAGAGTGGTaGCCGAAGGCGCGGAACATC | + |
|
Preference number: 4 (lower is better) Translates to: HSLSCLRKDSWQSRVRVTNDTEW*PKARNI Trigger: GATGTTCCGCGCCTTCGGCCACCACTCTGTGTCATT...GGTCACTCTGACCCTGCTTTGCCAAGAGTCCTTTCTCAGACAACTGAGGGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS-3UTR CCA 90 bp | TGGAACTCCAGGTCTCTGGGATATCACCCCAAACACTCCCTCAGTTGTCTGAGAAGCAATGACACAGAGTaGTGGCCGAAGGCGCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: WNSRSLGYHPKHSLSCLRSNDTE*WPKARN Trigger: GTTCCGCGCCTTCGGCCACCACTCTGTGTCATTGCT...TCTCAGACAACTGAGGGAGTGTTTGGGGTGATATCCCAGAGACCTGGAGTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS-3UTR CCA 90 bp | CCCCTGGGTACCCTCTTACTGCCTGCCACCTTCTTGGCTACCTCAGCTGAGTATTTTGCCGGAGCTGATTaGCAGGTTCTGATTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLGTLLLPATFLATSAEYFAGAD*QVLIQP Trigger: TGGCTGAATCAGAACCTGCCAATCAGCTCCGGCAAA...ATACTCAGCTGAGGTAGCCAAGAAGGTGGCAGGCAGTAAGAGGGTACCCAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| 3UTR CAA 72 bp | CCCCAAACACTCCCTCAGTTGTCTGAGAAAGGACTCTaGGCAAAGCAGGGTCAGAGTGACCAGTGGCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PQTLPQLSEKGL*AKQGQSDQWLV Trigger: TACCAGCCACTGGTCACTCTGACCCTGCTTTGCCAAGAGTCCTTTCTCAGACAACTGAGGGAGTGTTTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS-3UTR TCA 90 bp | GTACCCTCTTACTGCCTGCCACCTTCTTGGCTACCTCAGCTGAGTATCTATGAGCTGATTGGCAGGTTCTaGTTCAGCCAGTGGCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VPSYCLPPSWLPQLSIYELIGRF*FSQWRK Trigger: CTTCCGCCACTGGCTGAATCAGAACCTGCCAATCAG...CTCATAGATACTCAGCTGAGGTAGCCAAGAAGGTGGCAGGCAGTAAGAGGGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS-3UTR GCA 90 bp | ATATCACCCCAAACACTCCCTCAGTTGTCTGAGAAAGGACTCTTGGCAAAGCAGCAGGCACGTCTGACTTaGCACAGAGGAAGGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ISPQTLPQLSEKGLLAKQQARLT*HRGRPP Trigger: TGGGGGCCTTCCTCTGTGGCAAGTCAGACGTGCCTG...CTGCTTTGCCAAGAGTCCTTTCTCAGACAACTGAGGGAGTGTTTGGGGTGATAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS-3UTR GCA 90 bp | GTACCCTCTTACTGCCTGCCACCTTCTTGGCTACCTCAGCTGAGTATCTATGAGCCCTCAGAGATGATATaGTCTGGCTGGGCACGCATG | + |
|
Preference number: 4 (lower is better) Translates to: VPSYCLPPSWLPQLSIYEPSEMI*SGWARM Trigger: CATGCGTGCCCAGCCAGAGCATATCATCTCTGAGGG...CTCATAGATACTCAGCTGAGGTAGCCAAGAAGGTGGCAGGCAGTAAGAGGGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| 3UTR CAA 72 bp | CAGGTCTCTGGGATATCACCCCAAACACTCCCTCAGTaGTCTGAGAAAGGACTCTTGGCAAAGCAGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QVSGISPQTLPQ*SEKGLLAKQGQ Trigger: CTGACCCTGCTTTGCCAAGAGTCCTTTCTCAGACAACTGAGGGAGTGTTTGGGGTGATATCCCAGAGACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS-3UTR TCA 90 bp | CAAACACTCCCTCAGTTGTCTGAGAAAGGACTCTTGGCAAAGCAGGGTCAGAGTCTGATTGGCAGGTTCTaGTTCAGCCAGTGGCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QTLPQLSEKGLLAKQGQSLIGRF*FSQWRK Trigger: CTTCCGCCACTGGCTGAATCAGAACCTGCCAATCAG...ACTCTGACCCTGCTTTGCCAAGAGTCCTTTCTCAGACAACTGAGGGAGTGTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS-3UTR GCA 90 bp | GTATCTATGAGTCACTGGAACTCCAGGTCTCTGGGATATCACCCCAAACACTCCCCCTCAGAGATGATATaGTCTGGCTGGGCACGCATG | + |
|
Preference number: 4 (lower is better) Translates to: VSMSHWNSRSLGYHPKHSPSEMI*SGWARM Trigger: CATGCGTGCCCAGCCAGAGCATATCATCTCTGAGGG...GGAGTGTTTGGGGTGATATCCCAGAGACCTGGAGTTCCAGTGACTCATAGATAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS-3UTR CCA 90 bp | GTATCTATGAGTCACTGGAACTCCAGGTCTCTGGGATATCACCCCAAACACTCCAATGACACAGAGTGGTaGCCGAAGGCGCGGAACATC | + |
|
Preference number: 4 (lower is better) Translates to: VSMSHWNSRSLGYHPKHSNDTEW*PKARNI Trigger: GATGTTCCGCGCCTTCGGCCACCACTCTGTGTCATT...GGAGTGTTTGGGGTGATATCCCAGAGACCTGGAGTTCCAGTGACTCATAGATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGTTGTCTGAGAAAGGACTCTTGGCAAAGCAGGGTCAGAGTGACCAGTGGCTTTGCCGGAGCTGATTaGCAGGTTCTGATTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSCLRKDSWQSRVRVTSGFAGAD*QVLIQP Trigger: TGGCTGAATCAGAACCTGCCAATCAGCTCCGGCAAA...GCCACTGGTCACTCTGACCCTGCTTTGCCAAGAGTCCTTTCTCAGACAACTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS-3UTR CCA 90 bp | AGTTGTCTGAGAAAGGACTCTTGGCAAAGCAGGGTCAGAGTGACCAGTGGCTGGATGATATGCTCTGGCTaGGCACGCATGTACCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SCLRKDSWQSRVRVTSGWMICSG*ARMYHS Trigger: AGAGTGGTACATGCGTGCCCAGCCAGAGCATATCAT...CCAGCCACTGGTCACTCTGACCCTGCTTTGCCAAGAGTCCTTTCTCAGACAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS-3UTR CCA 90 bp | AGTTGTCTGAGAAAGGACTCTTGGCAAAGCAGGGTCAGAGTGACCAGTGGCTGGAGAGATGATATGCTCTaGCTGGGCACGCATGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: SCLRKDSWQSRVRVTSGWRDDML*LGTHVP Trigger: TGGTACATGCGTGCCCAGCCAGAGCATATCATCTCT...CCAGCCACTGGTCACTCTGACCCTGCTTTGCCAAGAGTCCTTTCTCAGACAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS-3UTR CCA 90 bp | GTACCCTCTTACTGCCTGCCACCTTCTTGGCTACCTCAGCTGAGTATCTATGAGTCCAGGATGTCCTCGTaGGTCTTGATGAAAGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VPSYCLPPSWLPQLSIYESRMSS*VLMKEG Trigger: TCCCTCTTTCATCAAGACCCACGAGGACATCCTGGA...CTCATAGATACTCAGCTGAGGTAGCCAAGAAGGTGGCAGGCAGTAAGAGGGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAGGACTCTTGGCAAAGCAGGGTCAGAGTGACCAGTGGCTGGTACTGTGATTCCAGGATGTCCTCGTaGGTCTTGATGAAAGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RKDSWQSRVRVTSGWYCDSRMSS*VLMKEG Trigger: TCCCTCTTTCATCAAGACCCACGAGGACATCCTGGA...ATCACAGTACCAGCCACTGGTCACTCTGACCCTGCTTTGCCAAGAGTCCTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS-3UTR CCA 90 bp | GTATCTATGAGTCACTGGAACTCCAGGTCTCTGGGATATCACCCCAAACACTCCAGAGATGATATGCTCTaGCTGGGCACGCATGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: VSMSHWNSRSLGYHPKHSRDDML*LGTHVP Trigger: TGGTACATGCGTGCCCAGCCAGAGCATATCATCTCT...GGAGTGTTTGGGGTGATATCCCAGAGACCTGGAGTTCCAGTGACTCATAGATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS-3UTR CCA 90 bp | GTCTCTGGGATATCACCCCAAACACTCCCTCAGTTGTCTGAGAAAGGACTCTTGAGAGATGATATGCTCTaGCTGGGCACGCATGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: VSGISPQTLPQLSEKGLLRDDML*LGTHVP Trigger: TGGTACATGCGTGCCCAGCCAGAGCATATCATCTCT...CAAGAGTCCTTTCTCAGACAACTGAGGGAGTGTTTGGGGTGATATCCCAGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS CCA 90 bp | GGCTGGGTGCCTTGGAAACGGCCAGCTGCGCGGGCGTCCACCACCTaGAAGCGCCGGGCATCCAAGTTCTCCAGGATGTCCTCGTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GWVPWKRPAARASTT*KRRASKFSRMSSWV Trigger: GACCCACGAGGACATCCTGGAGAACTTGGATGCCCGGCGCTTCCAGGTGGTGGACGCCCGCGCAGCTGGCCGTTTCCAAGGCACCCAGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS CCA 90 bp | GAGCCAGGGATGTGGCCAGGTTCGATGCCATCTCGGGGTTCTGGCTaGGTGCCTTGGAAACGGCCAGCTGCGCGGGCGTCCACCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EPGMWPGSMPSRGSG*VPWKRPAARASTTW Trigger: CCAGGTGGTGGACGCCCGCGCAGCTGGCCGTTTCCAAGGCACCCAGCCAGAACCCCGAGATGGCATCGAACCTGGCCACATCCCTGGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS-3UTR CAA 90 bp | CCTCCCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCCTGGGTACCCTCTTACGCATCGCGGCCCAGCTaGGGTAGGTACCAGGACGCG | + |
|
Preference number: 5 (lower is better) Translates to: PPFLPSSLPPSLPWVPSYASRPS*GRYQDA Trigger: CGCGTCCTGGTACCTACCCAAGCTGGGCCGCGATGC...GTAAGAGGGTACCCAGGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGAAGGGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS GCA 90 bp | GATGCCATCTCGGGGTTCTGGCTGGGTGCCTTGGAAACGGCCAGCTaGGCGGGCGTCCACCACCTGGAAGCGCCGGGCATCCAAGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: DAISGFWLGALETAS*AGVHHLEAPGIQVL Trigger: GAGAACTTGGATGCCCGGCGCTTCCAGGTGGTGGACGCCCGCGCAGCTGGCCGTTTCCAAGGCACCCAGCCAGAACCCCGAGATGGCATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS GCA 90 bp | CAGGGATGTGGCCAGGTTCGATGCCATCTCGGGGTTCTGGCTGGGTaGCTTGGAAACGGCCAGCTGCGCGGGCGTCCACCACCTGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: QGCGQVRCHLGVLAG*LGNGQLRGRPPPGS Trigger: GCTTCCAGGTGGTGGACGCCCGCGCAGCTGGCCGTTTCCAAGGCACCCAGCCAGAACCCCGAGATGGCATCGAACCTGGCCACATCCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS CCA 90 bp | CGGAATAGAGGCCCTGGTCACTGTCGTCGTAGATCACGACGTGCGTaGCGGCGCTCACGCCCAAGCTGCCCGCGTAGTCGGCAAAGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: RNRGPGHCRRRSRRA*RRSRPSCPRSRQSA Trigger: CGCACTTTGCCGACTACGCGGGCAGCTTGGGCGTGAGCGCCGCCACGCACGTCGTGATCTACGACGACAGTGACCAGGGCCTCTATTCCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 ENSMUST00000231159.2 |
||
| CDS CCA 90 bp | TGGTCACTGCAACGATCGATGTCGAAGAAGGCGGCGCCCGGGATGTaGCGCTCCTCAAACTCGCGTCGTGCATCGCGGCCCAGCTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: WSLQRSMSKKAAPGM*RSSNSRRASRPSLG Trigger: ACCCAAGCTGGGCCGCGATGCACGACGCGAGTTTGAGGAGCGCCACATCCCGGGCGCCGCCTTCTTCGACATCGATCGTTGCAGTGACCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 ENSMUST00000231159.2 |
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| CDS CCA 90 bp | CGCGCTGAACTCCGCGGGCTCCGAGTGGCTTTTGCCGGAGCTGATTaGCAGGTTCTGATTCAGCCAGTGGCGGAAGCCGCCGTCCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: RAELRGLRVAFAGAD*QVLIQPVAEAAVQQ Trigger: TTGCTGGACGGCGGCTTCCGCCACTGGCTGAATCAGAACCTGCCAATCAGCTCCGGCAAAAGCCACTCGGAGCCCGCGGAGTTCAGCGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 ENSMUST00000231159.2 |
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| CDS CCA 90 bp | GGATGTGGCGCTCCTCAAACTCGCGTCGTGCATCGCGGCCCAGCTTaGGTAGGTACCAGGACGCGTCCAGTAACTTCAGCGGCTGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GCGAPQTRVVHRGPA*VGTRTRPVTSAAVR Trigger: CCTCACAGCCGCTGAAGTTACTGGACGCGTCCTGGTACCTACCCAAGCTGGGCCGCGATGCACGACGCGAGTTTGAGGAGCGCCACATCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 ENSMUST00000229791.2 ENSMUST00000231159.2 |
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| CDS CCA 90 bp | ACAGGCACGTCTGACTTGCCACAGAGGAAGGCCCCCAGGACCACGTaGCAGGCTGTGACACCGGAGCCACACGTGGCTACCAAGGGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: TGTSDLPQRKAPRTT*QAVTPEPHVATKGL Trigger: TAAGCCCTTGGTAGCCACGTGTGGCTCCGGTGTCACAGCCTGCCACGTGGTCCTGGGGGCCTTCCTCTGTGGCAAGTCAGACGTGCCTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS TCA 90 bp | TCCGCGGGCTCCGAGTGGCTTTTGCCGGAGCTGATTGGCAGGTTCTaGTTCAGCCAGTGGCGGAAGCCGCCGTCCAGCAATGACACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SAGSEWLLPELIGRF*FSQWRKPPSSNDTE Trigger: CTCTGTGTCATTGCTGGACGGCGGCTTCCGCCACTGGCTGAATCAGAACCTGCCAATCAGCTCCGGCAAAAGCCACTCGGAGCCCGCGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 ENSMUST00000231159.2 |
||
| CDS GCA 90 bp | TTCTCCAGGATGTCCTCGTGGGTCTTGATGAAAGAGGGATCGAGCTaGGCGCTGAACTCCGCGGGCTCCGAGTGGCTTTTGCCGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FSRMSSWVLMKEGSS*ALNSAGSEWLLPEL Trigger: CAGCTCCGGCAAAAGCCACTCGGAGCCCGCGGAGTTCAGCGCGCAGCTCGATCCCTCTTTCATCAAGACCCACGAGGACATCCTGGAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS CCA 90 bp | ACCACCTGGAAGCGCCGGGCATCCAAGTTCTCCAGGATGTCCTCGTaGGTCTTGATGAAAGAGGGATCGAGCTGCGCGCTGAACTCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: TTWKRRASKFSRMSS*VLMKEGSSCALNSA Trigger: CGCGGAGTTCAGCGCGCAGCTCGATCCCTCTTTCATCAAGACCCACGAGGACATCCTGGAGAACTTGGATGCCCGGCGCTTCCAGGTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CAA 90 bp | CTGAGAAAGGACTCTTGGCAAAGCAGGGTCAGAGTGACCAGTGGCTGGTACTGTGCATCGCGGCCCAGCTaGGGTAGGTACCAGGACGCG | + |
|
Preference number: 5 (lower is better) Translates to: LRKDSWQSRVRVTSGWYCASRPS*GRYQDA Trigger: CGCGTCCTGGTACCTACCCAAGCTGGGCCGCGATGC...ACAGTACCAGCCACTGGTCACTCTGACCCTGCTTTGCCAAGAGTCCTTTCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS-3UTR CAA 90 bp | CTCAGTTGTCTGAGAAAGGACTCTTGGCAAAGCAGGGTCAGAGTGACCAGTGGCGCATCGCGGCCCAGCTaGGGTAGGTACCAGGACGCG | + |
|
Preference number: 5 (lower is better) Translates to: LSCLRKDSWQSRVRVTSGASRPS*GRYQDA Trigger: CGCGTCCTGGTACCTACCCAAGCTGGGCCGCGATGC...GCCACTGGTCACTCTGACCCTGCTTTGCCAAGAGTCCTTTCTCAGACAACTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS-3UTR CAA 90 bp | CAAACACTCCCTCAGTTGTCTGAGAAAGGACTCTTGGCAAAGCAGGGTCAGAGTGCATCGCGGCCCAGCTaGGGTAGGTACCAGGACGCG | + |
|
Preference number: 5 (lower is better) Translates to: QTLPQLSEKGLLAKQGQSASRPS*GRYQDA Trigger: CGCGTCCTGGTACCTACCCAAGCTGGGCCGCGATGC...ACTCTGACCCTGCTTTGCCAAGAGTCCTTTCTCAGACAACTGAGGGAGTGTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS TCA 90 bp | CTCCAGGCCTTCGTTGGTCAGGAATTCAGTGAACGGGATGTTTACTaGGCCAGGGATGTGGCCAGGTTCGATGCCATCTCGGGGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LQAFVGQEFSERDVY*ARDVARFDAISGFW Trigger: CCAGAACCCCGAGATGGCATCGAACCTGGCCACATCCCTGGCTCAGTAAACATCCCGTTCACTGAATTCCTGACCAACGAAGGCCTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS TCA 90 bp | TCTCCTCTGGGCTCTTCTCCAGGCCTTCGTTGGTCAGGAATTCAGTaGACGGGATGTTTACTGAGCCAGGGATGTGGCCAGGTTCGATGC | + |
|
Preference number: 5 (lower is better) Translates to: SPLGSSPGLRWSGIQ*TGCLLSQGCGQVRC Trigger: GCATCGAACCTGGCCACATCCCTGGCTCAGTAAACATCCCGTTCACTGAATTCCTGACCAACGAAGGCCTGGAGAAGAGCCCAGAGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS CCA 72 bp | GGCCCTGGTCACTGTCGTCGTAGATCACGACGTGCGTaGCGGCGCTCACGCCCAAGCTGCCCGCGTAGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: GPGHCRRRSRRA*RRSRPSCPRSR Trigger: CCGACTACGCGGGCAGCTTGGGCGTGAGCGCCGCCACGCACGTCGTGATCTACGACGACAGTGACCAGGGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 ENSMUST00000231159.2 |
||
| CDS CCA 72 bp | CAACGATCGATGTCGAAGAAGGCGGCGCCCGGGATGTaGCGCTCCTCAAACTCGCGTCGTGCATCGCGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: QRSMSKKAAPGM*RSSNSRRASRP Trigger: GGGCCGCGATGCACGACGCGAGTTTGAGGAGCGCCACATCCCGGGCGCCGCCTTCTTCGACATCGATCGTTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 ENSMUST00000231159.2 |
||
| CDS CCA 72 bp | CCTTGGAAACGGCCAGCTGCGCGGGCGTCCACCACCTaGAAGCGCCGGGCATCCAAGTTCTCCAGGATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PWKRPAARASTT*KRRASKFSRMS Trigger: GGACATCCTGGAGAACTTGGATGCCCGGCGCTTCCAGGTGGTGGACGCCCGCGCAGCTGGCCGTTTCCAAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS CCA 72 bp | AGGGATGTGGCCAGGTTCGATGCCATCTCGGGGTTCTaGCTGGGTGCCTTGGAAACGGCCAGCTGCGCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RDVARFDAISGF*LGALETASCAG Trigger: GCCCGCGCAGCTGGCCGTTTCCAAGGCACCCAGCCAGAACCCCGAGATGGCATCGAACCTGGCCACATCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS CCA 72 bp | CTCCGCGGGCTCCGAGTGGCTTTTGCCGGAGCTGATTaGCAGGTTCTGATTCAGCCAGTGGCGGAAGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: LRGLRVAFAGAD*QVLIQPVAEAA Trigger: GGCGGCTTCCGCCACTGGCTGAATCAGAACCTGCCAATCAGCTCCGGCAAAAGCCACTCGGAGCCCGCGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 ENSMUST00000231159.2 |
||
| CDS CCA 72 bp | TCTGACTTGCCACAGAGGAAGGCCCCCAGGACCACGTaGCAGGCTGTGACACCGGAGCCACACGTGGCTACC | + |
|
Preference number: 6 (lower is better) Translates to: SDLPQRKAPRTT*QAVTPEPHVAT Trigger: GGTAGCCACGTGTGGCTCCGGTGTCACAGCCTGCCACGTGGTCCTGGGGGCCTTCCTCTGTGGCAAGTCAGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
||
| CDS CAA 90 bp | GGGATGTGGCGCTCCTCAAACTCGCGTCGTGCATCGCGGCCCAGCTaGGGTAGGTACCAGGACGCGTCCAGTAACTTCAGCGGCTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GMWRSSNSRRASRPS*GRYQDASSNFSGCE Trigger: CTCACAGCCGCTGAAGTTACTGGACGCGTCCTGGTACCTACCCAAGCTGGGCCGCGATGCACGACGCGAGTTTGAGGAGCGCCACATCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 ENSMUST00000229791.2 ENSMUST00000231159.2 |
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| CDS CAA 90 bp | TGGAAGCGCCGGGCATCCAAGTTCTCCAGGATGTCCTCGTGGGTCTaGATGAAAGAGGGATCGAGCTGCGCGCTGAACTCCGCGGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: WKRRASKFSRMSSWV*MKEGSSCALNSAGS Trigger: GGAGCCCGCGGAGTTCAGCGCGCAGCTCGATCCCTCTTTCATCAAGACCCACGAGGACATCCTGGAGAACTTGGATGCCCGGCGCTTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS CCA 72 bp | GCTCCTCAAACTCGCGTCGTGCATCGCGGCCCAGCTTaGGTAGGTACCAGGACGCGTCCAGTAACTTCAGCG | + |
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Preference number: 6 (lower is better) Translates to: APQTRVVHRGPA*VGTRTRPVTSA Trigger: CGCTGAAGTTACTGGACGCGTCCTGGTACCTACCCAAGCTGGGCCGCGATGCACGACGCGAGTTTGAGGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 ENSMUST00000229791.2 ENSMUST00000231159.2 |
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| CDS CAA 72 bp | CGCTCCTCAAACTCGCGTCGTGCATCGCGGCCCAGCTaGGGTAGGTACCAGGACGCGTCCAGTAACTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: RSSNSRRASRPS*GRYQDASSNFS Trigger: GCTGAAGTTACTGGACGCGTCCTGGTACCTACCCAAGCTGGGCCGCGATGCACGACGCGAGTTTGAGGAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 ENSMUST00000229791.2 ENSMUST00000231159.2 |
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| CDS CCA 72 bp | CTGGGTCTTCCCTCGGCCCTCAGAGATGATATGCTCTaGCTGGGCACGCATGTACCACTCTACCCAGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: LGLPSALRDDML*LGTHVPLYPGA Trigger: GGCTCCTGGGTAGAGTGGTACATGCGTGCCCAGCCAGAGCATATCATCTCTGAGGGCCGAGGGAAGACCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS TCA 72 bp | TCCGAGTGGCTTTTGCCGGAGCTGATTGGCAGGTTCTaGTTCAGCCAGTGGCGGAAGCCGCCGTCCAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: SEWLLPELIGRF*FSQWRKPPSSN Trigger: ATTGCTGGACGGCGGCTTCCGCCACTGGCTGAATCAGAACCTGCCAATCAGCTCCGGCAAAAGCCACTCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 ENSMUST00000231159.2 |
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| CDS CCA 72 bp | AAGCGCCGGGCATCCAAGTTCTCCAGGATGTCCTCGTaGGTCTTGATGAAAGAGGGATCGAGCTGCGCGCTG | + |
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Preference number: 6 (lower is better) Translates to: KRRASKFSRMSS*VLMKEGSSCAL Trigger: CAGCGCGCAGCTCGATCCCTCTTTCATCAAGACCCACGAGGACATCCTGGAGAACTTGGATGCCCGGCGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS CCA 72 bp | GTCTTCCCTCGGCCCTCAGAGATGATATGCTCTGGCTaGGCACGCATGTACCACTCTACCCAGGAGCCATCA | + |
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Preference number: 6 (lower is better) Translates to: VFPRPSEMICSG*ARMYHSTQEPS Trigger: TGATGGCTCCTGGGTAGAGTGGTACATGCGTGCCCAGCCAGAGCATATCATCTCTGAGGGCCGAGGGAAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS CAA 72 bp | CGGGCATCCAAGTTCTCCAGGATGTCCTCGTGGGTCTaGATGAAAGAGGGATCGAGCTGCGCGCTGAACTCC | + |
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Preference number: 6 (lower is better) Translates to: RASKFSRMSSWV*MKEGSSCALNS Trigger: GGAGTTCAGCGCGCAGCTCGATCCCTCTTTCATCAAGACCCACGAGGACATCCTGGAGAACTTGGATGCCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS TCA 72 bp | GGCTCTTCTCCAGGCCTTCGTTGGTCAGGAATTCAGTaGACGGGATGTTTACTGAGCCAGGGATGTGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: GSSPGLRWSGIQ*TGCLLSQGCGQ Trigger: CTGGCCACATCCCTGGCTCAGTAAACATCCCGTTCACTGAATTCCTGACCAACGAAGGCCTGGAGAAGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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| CDS TCA 72 bp | TTCGTTGGTCAGGAATTCAGTGAACGGGATGTTTACTaGGCCAGGGATGTGGCCAGGTTCGATGCCATCTCG | + |
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Preference number: 6 (lower is better) Translates to: FVGQEFSERDVY*ARDVARFDAIS Trigger: CGAGATGGCATCGAACCTGGCCACATCCCTGGCTCAGTAAACATCCCGTTCACTGAATTCCTGACCAACGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043865.8 ENSMUST00000167140.8 ENSMUST00000169133.8 ENSMUST00000229739.2 |
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