Pregenerated sensors for MPPED2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000016386Ensembl transcript IDs: ENSMUST00000016530.14, ENSMUST00000111063.8, ENSMUST00000125023.2, ENSMUST00000144155.8
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTCAGTTCCTTCAGACGTCTGGTGTGCTGCTACCGATGTGGCTTTaGAGTTGTACTGTCCTTGGCAAGATTAAACTCCCAACTGAGTCG | + |
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Preference number: 1 (lower is better) Translates to: GQFLQTSGVLLPMWL*SCTVLGKIKLPTES Trigger: CGACTCAGTTGGGAGTTTAATCTTGCCAAGGACAGTACAACTGCAAAGCCACATCGGTAGCAGCACACCAGACGTCTGAAGGAACTGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
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| 3UTR CCA 90 bp | AGAATGGGTCAGTTCCTTCAGACGTCTGGTGTGCTGCTACCGATGTaGCTTTGCAGTTGTACTGTCCTTGGCAAGATTAAACTCCCAACT | + |
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Preference number: 1 (lower is better) Translates to: RMGQFLQTSGVLLPM*LCSCTVLGKIKLPT Trigger: AGTTGGGAGTTTAATCTTGCCAAGGACAGTACAACTGCAAAGCCACATCGGTAGCAGCACACCAGACGTCTGAAGGAACTGACCCATTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
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| 3UTR GCA 90 bp | TTGAGTTTGAAGAAAGAATGGGTCAGTTCCTTCAGACGTCTGGTGTaGTGCTACCGATGTGGCTTTGCAGTTGTACTGTCCTTGGCAAGA | + |
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Preference number: 1 (lower is better) Translates to: LSLKKEWVSSFRRLV*CYRCGFAVVLSLAR Trigger: TCTTGCCAAGGACAGTACAACTGCAAAGCCACATCGGTAGCAGCACACCAGACGTCTGAAGGAACTGACCCATTCTTTCTTCAAACTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
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| 3UTR GCA 90 bp | AGTTTGAAGAAAGAATGGGTCAGTTCCTTCAGACGTCTGGTGTGCTaGTACCGATGTGGCTTTGCAGTTGTACTGTCCTTGGCAAGATTA | + |
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Preference number: 1 (lower is better) Translates to: SLKKEWVSSFRRLVC*YRCGFAVVLSLARL Trigger: TAATCTTGCCAAGGACAGTACAACTGCAAAGCCACATCGGTAGCAGCACACCAGACGTCTGAAGGAACTGACCCATTCTTTCTTCAAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
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| 3UTR CCA 90 bp | GAAAGGACGACTAAGCCTTATTTAGTTCGCTTCCGATGCATCCACTaGAGTCTATACACACTGGTTACTGTACCTAGACTGGACTCAAGT | + |
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Preference number: 1 (lower is better) Translates to: ERTTKPYLVRFRCIH*SLYTLVTVPRLDSS Trigger: ACTTGAGTCCAGTCTAGGTACAGTAACCAGTGTGTATAGACTCCAGTGGATGCATCGGAAGCGAACTAAATAAGGCTTAGTCGTCCTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAATGGGTCAGTTCCTTCAGACGTCTGGTGTGCTGCTACCGATGTGGCTTTGCAATTTACAATGGCGTaGCCTTTGAGCAAACAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: KNGSVPSDVWCAATDVALQFTMA*PLSKQK Trigger: CTTCTGTTTGCTCAAAGGCCACGCCATTGTAAATTG...CAAAGCCACATCGGTAGCAGCACACCAGACGTCTGAAGGAACTGACCCATTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
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| 3UTR-3UTR TCA 90 bp | TTGAAGAAAGAATGGGTCAGTTCCTTCAGACGTCTGGTGTGCTGCTACCGATGTTGCATGACCATCTCTTaGCAGATTCTTGTTTCCTTA | + |
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Preference number: 2 (lower is better) Translates to: LKKEWVSSFRRLVCCYRCCMTIS*QILVSL Trigger: TAAGGAAACAAGAATCTGTCAAGAGATGGTCATGCA...ACATCGGTAGCAGCACACCAGACGTCTGAAGGAACTGACCCATTCTTTCTTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCGATGCATCCACTGGAGTCTATACACACTGGTTACTGTACCTAGACTGGACATATATAAATCCACATaGAAAGGGAGTCTGCACACT | + |
|
Preference number: 2 (lower is better) Translates to: FRCIHWSLYTLVTVPRLDIYKST*KGSLHT Trigger: AGTGTGCAGACTCCCTTTCCATGTGGATTTATATAT...GTCCAGTCTAGGTACAGTAACCAGTGTGTATAGACTCCAGTGGATGCATCGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
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| 3UTR-3UTR CCA 90 bp | ATATATATAAATCCACATGGAAAGGGAGTCTGCACACTTTCTTTTTCCTTGCATAGCTTGGCTGTCCTTTaGCAAATACTAACAATTTAC | + |
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Preference number: 2 (lower is better) Translates to: IYINPHGKGVCTLSFSLHSLAVL*QILTIY Trigger: GTAAATTGTTAGTATTTGCCAAAGGACAGCCAAGCT...ATGCAAGGAAAAAGAAAGTGTGCAGACTCCCTTTCCATGTGGATTTATATATAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
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| 3UTR GCA 72 bp | AAAGAATGGGTCAGTTCCTTCAGACGTCTGGTGTGCTaGTACCGATGTGGCTTTGCAGTTGTACTGTCCTTG | + |
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Preference number: 3 (lower is better) Translates to: KEWVSSFRRLVC*YRCGFAVVLSL Trigger: CAAGGACAGTACAACTGCAAAGCCACATCGGTAGCAGCACACCAGACGTCTGAAGGAACTGACCCATTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
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| 3UTR CCA 72 bp | CAGTTCCTTCAGACGTCTGGTGTGCTGCTACCGATGTaGCTTTGCAGTTGTACTGTCCTTGGCAAGATTAAA | + |
|
Preference number: 3 (lower is better) Translates to: QFLQTSGVLLPM*LCSCTVLGKIK Trigger: TTTAATCTTGCCAAGGACAGTACAACTGCAAAGCCACATCGGTAGCAGCACACCAGACGTCTGAAGGAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
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| 3UTR GCA 72 bp | GAAAGGACGACTAAGCCTTATTTAGTTCGCTTCCGATaGATCCACTGGAGTCTATACACACTGGTTACTGTA | + |
|
Preference number: 3 (lower is better) Translates to: ERTTKPYLVRFR*IHWSLYTLVTV Trigger: TACAGTAACCAGTGTGTATAGACTCCAGTGGATGCATCGGAAGCGAACTAAATAAGGCTTAGTCGTCCTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
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| 3UTR CCA 72 bp | ACTAAGCCTTATTTAGTTCGCTTCCGATGCATCCACTaGAGTCTATACACACTGGTTACTGTACCTAGACTG | + |
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Preference number: 3 (lower is better) Translates to: TKPYLVRFRCIH*SLYTLVTVPRL Trigger: CAGTCTAGGTACAGTAACCAGTGTGTATAGACTCCAGTGGATGCATCGGAAGCGAACTAAATAAGGCTTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
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| 3UTR-3UTR CAA 90 bp | CCGATGTGGCTTTGCAGTTGTACTGTCCTTGGCAAGATTAAACTCCCAACTGAGAAGCTTGGCTGTCCTTaGGCAAATACTAACAATTTA | + |
|
Preference number: 3 (lower is better) Translates to: PMWLCSCTVLGKIKLPTEKLGCP*ANTNNL Trigger: TAAATTGTTAGTATTTGCCAAAGGACAGCCAAGCTT...CTCAGTTGGGAGTTTAATCTTGCCAAGGACAGTACAACTGCAAAGCCACATCGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
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| 3UTR-3UTR CAA 90 bp | ACAATATTTTGTGCTAGCGAAGATTGCATCAACACACAGTGCAAAATGGGAGGGGCAGTTGTACTGTCCTaGGCAAGATTAAACTCCCAA | + |
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Preference number: 3 (lower is better) Translates to: TIFCASEDCINTQCKMGGAVVLS*ARLNSQ Trigger: TTGGGAGTTTAATCTTGCCAAGGACAGTACAACTGC...CCCTCCCATTTTGCACTGTGTGTTGATGCAATCTTCGCTAGCACAAAATATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
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| 3UTR-3UTR CAA 90 bp | GTTGTACTGTCCTTGGCAAGATTAAACTCCCAACTGAGTCGTAATGCACAAAAAATTCACAATGTTCCTTaGATTTCAAATGGATACCCC | + |
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Preference number: 3 (lower is better) Translates to: VVLSLARLNSQLSRNAQKIHNVP*ISNGYP Trigger: GGGGTATCCATTTGAAATCAAAGGAACATTGTGAAT...TTTTTGTGCATTACGACTCAGTTGGGAGTTTAATCTTGCCAAGGACAGTACAAC 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
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| 3UTR TCA 72 bp | TGGAAAGGGAGTCTGCACACTTTCTTTTTCCTTGCATaGCCATCTCTTGACAGATTCTTGTTTCCTTATTTT | + |
|
Preference number: 3 (lower is better) Translates to: WKGSLHTFFFLA*PSLDRFLFPYF Trigger: AAAATAAGGAAACAAGAATCTGTCAAGAGATGGTCATGCAAGGAAAAAGAAAGTGTGCAGACTCCCTTTCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
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| 3UTR GCA 72 bp | ATATATATATATATAAATCCACATGGAAAGGGAGTCTaGACACTTTCTTTTTCCTTGCATGACCATCTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: IYIYINPHGKGV*TLSFSLHDHLL Trigger: CAAGAGATGGTCATGCAAGGAAAAAGAAAGTGTGCAGACTCCCTTTCCATGTGGATTTATATATATATATAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
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| CDS-3UTR CCA 90 bp | TTGAAGAAAGAATGGGTCAGTTCCTTCAGACGTCTGGTGTGCTGCTACCGATGTATCCCACCGAACACATaGAGCTTGGGCCGAATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LKKEWVSSFRRLVCCYRCIPPNT*SLGRMR Trigger: GCGCATTCGGCCCAAGCTCCATGTGTTCGGTGGGAT...ACATCGGTAGCAGCACACCAGACGTCTGAAGGAACTGACCCATTCTTTCTTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
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| CDS-3UTR TCA 90 bp | AGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGTGCTCTGGAGTGTGTGTCTaGGATGCAGACAAACCGCGT | + |
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Preference number: 4 (lower is better) Translates to: RKMAVCRPSLTFQRDAECSGVCV*DADKPR Trigger: ACGCGGTTTGTCTGCATCTCAGACACACACTCCAGA...GCACTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
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| CDS-3UTR TCA 90 bp | ATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGGCAGTCCCAGCTCGGTaGAATCGCCTGTGTGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IRKMAVCRPSLTFQRDAEAVPAR*NRLCGE Trigger: TTCTCCACACAGGCGATTTCACCGAGCTGGGACTGC...CTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
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| CDS-3UTR TCA 90 bp | CTAAGCCTCTGCATGAGGGCTGTTCTTCCCCCACCTCAGACACAGTCTTCTTTAGCTGACTGTACAGGTTaGGGCATTGATGTAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLCMRAVLPPPQTQSSLADCTG*GIDVGG Trigger: ACCACCTACATCAATGCCTCAACCTGTACAGTCAGC...TAAAGAAGACTGTGTCTGAGGTGGGGGAAGAACAGCCCTCATGCAGAGGCTTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
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| CDS-3UTR TCA 90 bp | AAGAATGGGTCAGTTCCTTCAGACGTCTGGTGTGCTGCTACCGATGTGGCTTTGTGGTCGGTTGAAAGCTaGCTGTACAGGTTGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KNGSVPSDVWCAATDVALWSVES*LYRLRH Trigger: ATGCCTCAACCTGTACAGTCAGCTTTCAACCGACCA...CAAAGCCACATCGGTAGCAGCACACCAGACGTCTGAAGGAACTGACCCATTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
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| CDS-3UTR CCA 90 bp | TTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGTCCGCGTGTGGCCCGCTaGTTTTGGAGTGTCATATGG | + |
|
Preference number: 4 (lower is better) Translates to: LEKWQFVDRPSHSNGMLSPRVAR*FWSVIW Trigger: CCATATGACACTCCAAAACCAGCGGGCCACACGCGG...ACTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
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| CDS-3UTR CCA 90 bp | TTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGTCGAACACATGGAGCTTaGGCCGAATGCGCCTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: LEKWQFVDRPSHSNGMLSRTHGA*AECASG Trigger: TCCAGAGGCGCATTCGGCCCAAGCTCCATGTGTTCG...ACTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
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| CDS-3UTR TCA 90 bp | TTCCGATGCATCCACTGGAGTCTATACACACTGGTTACTGTACCTAGACTGGACTGTAACCGTCGGTCATaGTGCCGTACCCTTCGTGAA | + |
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Preference number: 4 (lower is better) Translates to: FRCIHWSLYTLVTVPRLDCNRRS*CRTLRE Trigger: TTCACGAAGGGTACGGCATCATGACCGACGGTTACA...GTCCAGTCTAGGTACAGTAACCAGTGTGTATAGACTCCAGTGGATGCATCGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
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| CDS-3UTR GCA 90 bp | ATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGGGAGCTTGGGCCGAATaGGCCTCTGGACTGTGTTTA | + |
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Preference number: 4 (lower is better) Translates to: IRKMAVCRPSLTFQRDAEGAWAE*ASGLCL Trigger: TAAACACAGTCCAGAGGCGCATTCGGCCCAAGCTCC...CTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
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| CDS-3UTR CCA 90 bp | AGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGTGCTGTACATGTGGCGGCTaGAATCTGCTCTGGTTGATG | + |
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Preference number: 4 (lower is better) Translates to: RKMAVCRPSLTFQRDAECCTCGG*NLLWLM Trigger: CATCAACCAGAGCAGATTCCAGCCGCCACATGTACA...GCACTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
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| CDS-3UTR CCA 90 bp | TTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGTGTGGCCCGCTGGTTTTaGAGTGTCATATGGGATGGG | + |
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Preference number: 4 (lower is better) Translates to: LEKWQFVDRPSHSNGMLSVARWF*SVIWDG Trigger: CCCATCCCATATGACACTCCAAAACCAGCGGGCCAC...ACTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
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| CDS-3UTR CCA 90 bp | CTAAGCCTCTGCATGAGGGCTGTTCTTCCCCCACCTCAGACACAGTCTTCTTTAGGATACCATCTGTTCTaGAGTGTGTGTCTGAGATGC | + |
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Preference number: 4 (lower is better) Translates to: LSLCMRAVLPPPQTQSSLGYHLF*SVCLRC Trigger: GCATCTCAGACACACACTCCAGAACAGATGGTATCC...TAAAGAAGACTGTGTCTGAGGTGGGGGAAGAACAGCCCTCATGCAGAGGCTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
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| CDS-3UTR TCA 90 bp | AGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGTGCATGGTAACTTTGCCTTaGGAAGGAATCCCATGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RKMAVCRPSLTFQRDAECMVTLP*EGIPCA Trigger: GGCACATGGGATTCCTTCTCAAGGCAAAGTTACCAT...GCACTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
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| CDS-3UTR TCA 90 bp | ATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGAAACTTCTTAACCTCTaGGGGCAGTCCCAGCTCGGT | + |
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Preference number: 4 (lower is better) Translates to: IRKMAVCRPSLTFQRDAEKLLNL*GQSQLG Trigger: ACCGAGCTGGGACTGCCCTCAGAGGTTAAGAAGTTT...CTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
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| CDS-3UTR TCA 90 bp | AGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGTGCGTGCACCGTATATCCTaGATCCTTTCACGGTTACCT | + |
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Preference number: 4 (lower is better) Translates to: RKMAVCRPSLTFQRDAECVHRIS*ILSRLP Trigger: AGGTAACCGTGAAAGGATTCAGGATATACGGTGCAC...GCACTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
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| CDS-3UTR TCA 90 bp | GCTTCCGATGCATCCACTGGAGTCTATACACACTGGTTACTGTACCTAGACTGGTACAGGTTGAGGCATTaGTGTAGGTGGTGTAACCGT | + |
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Preference number: 4 (lower is better) Translates to: ASDASTGVYTHWLLYLDWYRLRH*CRWCNR Trigger: ACGGTTACACCACCTACATCAATGCCTCAACCTGTA...CCAGTCTAGGTACAGTAACCAGTGTGTATAGACTCCAGTGGATGCATCGGAAGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
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| CDS-3UTR TCA 90 bp | ATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGGGAGGGTTGGTCGGTTaGAAGCTGACTGTACAGGTT | + |
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Preference number: 4 (lower is better) Translates to: IRKMAVCRPSLTFQRDAEGGLVG*KLTVQV Trigger: AACCTGTACAGTCAGCTTTCAACCGACCAACCCTCC...CTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
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| CDS-3UTR GCA 90 bp | ATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGAGTGTGTGTCTGAGATaGAGACAAACCGCGTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: IRKMAVCRPSLTFQRDAESVCLR*RQTACG Trigger: GCCACACGCGGTTTGTCTGCATCTCAGACACACACT...CTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
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| CDS-3UTR CCA 90 bp | ATAATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTCAGACAAACCGCGTGTaGCCCGCTGGTTTTGGAGTG | + |
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Preference number: 4 (lower is better) Translates to: IIRKMAVCRPSLTFQRDAQTNRV*PAGFGV Trigger: CACTCCAAAACCAGCGGGCCACACGCGGTTTGTCTG...AGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAATTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
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| CDS-3UTR TCA 90 bp | AGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGTGCTTTGTCAGGAGGGACTaGACATTGTCAAAGTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: RKMAVCRPSLTFQRDAECFVRRD*TLSKSS Trigger: AGAGGACTTTGACAATGTTCAGTCCCTCCTGACAAA...GCACTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
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| CDS-3UTR TCA 90 bp | TTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGTGCTGACTGTACAGGTTaGGGCATTGATGTAGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: LEKWQFVDRPSHSNGMLSADCTG*GIDVGG Trigger: ACCACCTACATCAATGCCTCAACCTGTACAGTCAGC...ACTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
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| CDS-3UTR TCA 90 bp | ATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGTGGTCGGTTGAAAGCTaGCTGTACAGGTTGAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: IRKMAVCRPSLTFQRDAEWSVES*LYRLRH Trigger: ATGCCTCAACCTGTACAGTCAGCTTTCAACCGACCA...CTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
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| CDS-3UTR GCA 90 bp | GAGTTTATAATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGCCACGGGGTCCAGGGTaGACCGTATATCCTGAATCC | + |
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Preference number: 4 (lower is better) Translates to: EFIIRKMAVCRPSLTFQRPRGPG*TVYPES Trigger: GGATTCAGGATATACGGTGCACCCTGGACCCCGTGG...CCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAATTATAAACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
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| CDS-3UTR CCA 90 bp | ATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGGACCATATGTACATGTaGCGGCTGGAATCTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IRKMAVCRPSLTFQRDAEDHMYM*RLESAL Trigger: CAGAGCAGATTCCAGCCGCCACATGTACATATGGTC...CTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
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| CDS-3UTR CCA 90 bp | ATAATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGTGGCCCGCTGGTTTTaGAGTGTCATATGGGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: IIRKMAVCRPSLTFQRDAVARWF*SVIWDG Trigger: CCCATCCCATATGACACTCCAAAACCAGCGGGCCAC...AGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAATTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
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| CDS-3UTR CCA 90 bp | GAGTTTATAATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGCCGCGTGTGGCCCGCTaGTTTTGGAGTGTCATATGG | + |
|
Preference number: 4 (lower is better) Translates to: EFIIRKMAVCRPSLTFQRPRVAR*FWSVIW Trigger: CCATATGACACTCCAAAACCAGCGGGCCACACGCGG...CCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAATTATAAACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
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| CDS-3UTR CCA 90 bp | CTTTGGCAAATACTAACAATTTACAATGGCGTGGCCTTTGAGCAAACAGAAGTCCGAACACATGGAGCTTaGGCCGAATGCGCCTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: LWQILTIYNGVAFEQTEVRTHGA*AECASG Trigger: TCCAGAGGCGCATTCGGCCCAAGCTCCATGTGTTCG...GACTTCTGTTTGCTCAAAGGCCACGCCATTGTAAATTGTTAGTATTTGCCAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
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| CDS-3UTR CCA 90 bp | GAGTTTATAATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGATCCCACCGAACACATaGAGCTTGGGCCGAATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: EFIIRKMAVCRPSLTFQRIPPNT*SLGRMR Trigger: GCGCATTCGGCCCAAGCTCCATGTGTTCGGTGGGAT...CCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAATTATAAACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
||
| CDS-3UTR TCA 90 bp | ATAATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTAAACTTCTTAACCTCTaGGGGCAGTCCCAGCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: IIRKMAVCRPSLTFQRDAKLLNL*GQSQLG Trigger: ACCGAGCTGGGACTGCCCTCAGAGGTTAAGAAGTTT...AGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAATTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
||
| CDS-3UTR TCA 90 bp | GTGCTGCTACCGATGTGGCTTTGCAGTTGTACTGTCCTTGGCAAGATTAAACTCTTTGTCAGGAGGGACTaGACATTGTCAAAGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLLPMWLCSCTVLGKIKLFVRRD*TLSKSS Trigger: AGAGGACTTTGACAATGTTCAGTCCCTCCTGACAAA...GAGTTTAATCTTGCCAAGGACAGTACAACTGCAAAGCCACATCGGTAGCAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
||
| CDS-3UTR TCA 90 bp | ATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGGTGCACCGTATATCCTaGATCCTTTCACGGTTACCT | + |
|
Preference number: 4 (lower is better) Translates to: IRKMAVCRPSLTFQRDAEVHRIS*ILSRLP Trigger: AGGTAACCGTGAAAGGATTCAGGATATACGGTGCAC...CTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
||
| CDS-3UTR TCA 90 bp | ATAATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTTGTAACCGTCGGTCATaGTGCCGTACCCTTCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IIRKMAVCRPSLTFQRDACNRRS*CRTLRE Trigger: TTCACGAAGGGTACGGCATCATGACCGACGGTTACA...AGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAATTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
||
| CDS-3UTR TCA 90 bp | ATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGTACAGGTTGAGGCATTaGTGTAGGTGGTGTAACCGT | + |
|
Preference number: 4 (lower is better) Translates to: IRKMAVCRPSLTFQRDAEYRLRH*CRWCNR Trigger: ACGGTTACACCACCTACATCAATGCCTCAACCTGTA...CTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
||
| CDS-3UTR TCA 90 bp | ACAATATTTTGTGCTAGCGAAGATTGCATCAACACACAGTGCAAAATGGGAGGGGGAGGGTTGGTCGGTTaGAAGCTGACTGTACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TIFCASEDCINTQCKMGGGGLVG*KLTVQV Trigger: AACCTGTACAGTCAGCTTTCAACCGACCAACCCTCC...CCCTCCCATTTTGCACTGTGTGTTGATGCAATCTTCGCTAGCACAAAATATTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
||
| CDS-3UTR GCA 90 bp | GAGTTTATAATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGGAGCTTGGGCCGAATaGGCCTCTGGACTGTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: EFIIRKMAVCRPSLTFQRGAWAE*ASGLCL Trigger: TAAACACAGTCCAGAGGCGCATTCGGCCCAAGCTCC...CCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAATTATAAACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
||
| 3UTR CAA 72 bp | TGCTGCTACCGATGTGGCTTTGCAGTTGTACTGTCCTaGGCAAGATTAAACTCCCAACTGAGTCGTAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: CCYRCGFAVVLS*ARLNSQLSRNA Trigger: TGCATTACGACTCAGTTGGGAGTTTAATCTTGCCAAGGACAGTACAACTGCAAAGCCACATCGGTAGCAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
||
| CDS-3UTR TCA 90 bp | GTTGTACTGTCCTTGGCAAGATTAAACTCCCAACTGAGTCGTAATGCACAAAAATCTGGAGTGTGTGTCTaGGATGCAGACAAACCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: VVLSLARLNSQLSRNAQKSGVCV*DADKPR Trigger: ACGCGGTTTGTCTGCATCTCAGACACACACTCCAGA...TTTTTGTGCATTACGACTCAGTTGGGAGTTTAATCTTGCCAAGGACAGTACAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
||
| CDS-3UTR TCA 90 bp | TTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGTTTGGAAGGTCAAATATaGTTGGAGGGTTGGTCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LEKWQFVDRPSHSNGMLSLEGQI*LEGWSV Trigger: AACCGACCAACCCTCCAATCATATTTGACCTTCCAA...ACTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
||
| CDS-3UTR GCA 90 bp | AAGAATGGGTCAGTTCCTTCAGACGTCTGGTGTGCTGCTACCGATGTGGCTTTGCTGTTTAACGAGGTCTaGCATGAATTCCTTATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KNGSVPSDVWCAATDVALLFNEV*HEFLIK Trigger: TTTGATAAGGAATTCATGGCAGACCTCGTTAAACAG...CAAAGCCACATCGGTAGCAGCACACCAGACGTCTGAAGGAACTGACCCATTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
||
| CDS-3UTR CCA 90 bp | TTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGTGAGTGTCATATGGGATaGGGTCGACCATATGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: LEKWQFVDRPSHSNGMLSECHMG*GRPYVH Trigger: ATGTACATATGGTCGACCCCATCCCATATGACACTC...ACTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
||
| CDS-3UTR CCA 90 bp | ATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGTTTTGGAGTGTCATATaGGATGGGGTCGACCATATG | + |
|
Preference number: 4 (lower is better) Translates to: IRKMAVCRPSLTFQRDAEFWSVI*DGVDHM Trigger: CATATGGTCGACCCCATCCCATATGACACTCCAAAA...CTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
||
| CDS-3UTR CCA 90 bp | TTAGCAACAATATTTTGTGCTAGCGAAGATTGCATCAACACACAGTGCAAAATGCAGACAAACCGCGTGTaGCCCGCTGGTTTTGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LATIFCASEDCINTQCKMQTNRV*PAGFGV Trigger: CACTCCAAAACCAGCGGGCCACACGCGGTTTGTCTG...CATTTTGCACTGTGTGTTGATGCAATCTTCGCTAGCACAAAATATTGTTGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
||
| CDS-3UTR CCA 90 bp | CCCCACCTCAGACACAGTCTTCTTTATAGCCAGAGAGAAGCTAAGGTTTTTCCTCCTCTGGTTTCAATTTaGACACAGAAGGGAAACGGT | + |
|
Preference number: 4 (lower is better) Translates to: PHLRHSLLYSQREAKVFPPLVSI*TQKGNG Trigger: ACCGTTTCCCTTCTGTGTCCAAATTGAAACCAGAGG...AGGAAAAACCTTAGCTTCTCTCTGGCTATAAAGAAGACTGTGTCTGAGGTGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGCCTCTGCATGAGGGCTGTTCTTCCCCCACCTCAGACACAGTCTTCTTTAATTGTCAAAGTCCTCTaGTTTCAATTTGGACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSLCMRAVLPPPQTQSSLIVKVL*FQFGHR Trigger: TCTGTGTCCAAATTGAAACCAGAGGACTTTGACAAT...TAAAGAAGACTGTGTCTGAGGTGGGGGAAGAACAGCCCTCATGCAGAGGCTTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
||
| CDS-3UTR CCA 90 bp | ATAATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTTTGTCCAGCAGAGACTaGCCTCTGGGTAGGTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: IIRKMAVCRPSLTFQRDALSSRD*PLGRLK Trigger: CTTTAACCTACCCAGAGGCCAGTCTCTGCTGGACAA...AGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAATTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCCGATGCATCCACTGGAGTCTATACACACTGGTTACTGTACCTAGACTGGTTTCACGGTTACCTCTaGATCTTGCAAGTAAATACT | + |
|
Preference number: 4 (lower is better) Translates to: ASDASTGVYTHWLLYLDWFHGYL*ILQVNT Trigger: AGTATTTACTTGCAAGATTCAGAGGTAACCGTGAAA...CCAGTCTAGGTACAGTAACCAGTGTGTATAGACTCCAGTGGATGCATCGGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
||
| CDS-3UTR GCA 90 bp | AGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGTGCCTGTTTAACGAGGTCTaGCATGAATTCCTTATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RKMAVCRPSLTFQRDAECLFNEV*HEFLIK Trigger: TTTGATAAGGAATTCATGGCAGACCTCGTTAAACAG...GCACTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTTATAATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGTGTACATGTGGCGGCTaGAATCTGCTCTGGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: EFIIRKMAVCRPSLTFQRCTCGG*NLLWLM Trigger: CATCAACCAGAGCAGATTCCAGCCGCCACATGTACA...CCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAATTATAAACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTTATAATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGACCATATGTACATGTaGCGGCTGGAATCTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EFIIRKMAVCRPSLTFQRDHMYM*RLESAL Trigger: CAGAGCAGATTCCAGCCGCCACATGTACATATGGTC...CCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAATTATAAACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGTGCATTGTCAAAGTCCTCTaGTTTCAATTTGGACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKMAVCRPSLTFQRDAECIVKVL*FQFGHR Trigger: TCTGTGTCCAAATTGAAACCAGAGGACTTTGACAAT...GCACTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
||
| CDS-3UTR CCA 90 bp | CTTTGGCAAATACTAACAATTTACAATGGCGTGGCCTTTGAGCAAACAGAAGTCTTGTCCAGCAGAGACTaGCCTCTGGGTAGGTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LWQILTIYNGVAFEQTEVLSSRD*PLGRLK Trigger: CTTTAACCTACCCAGAGGCCAGTCTCTGCTGGACAA...GACTTCTGTTTGCTCAAAGGCCACGCCATTGTAAATTGTTAGTATTTGCCAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
||
| CDS-3UTR TCA 90 bp | ACAATATTTTGTGCTAGCGAAGATTGCATCAACACACAGTGCAAAATGGGAGGGTTGGAAGGTCAAATATaGTTGGAGGGTTGGTCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TIFCASEDCINTQCKMGGLEGQI*LEGWSV Trigger: AACCGACCAACCCTCCAATCATATTTGACCTTCCAA...CCCTCCCATTTTGCACTGTGTGTTGATGCAATCTTCGCTAGCACAAAATATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
||
| CDS-3UTR CCA 90 bp | ATAATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTTTTTGGAGTGTCATATaGGATGGGGTCGACCATATG | + |
|
Preference number: 4 (lower is better) Translates to: IIRKMAVCRPSLTFQRDAFWSVI*DGVDHM Trigger: CATATGGTCGACCCCATCCCATATGACACTCCAAAA...AGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAATTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTTATAATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGGATACCATCTGTTCTaGAGTGTGTGTCTGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: EFIIRKMAVCRPSLTFQRGYHLF*SVCLRC Trigger: GCATCTCAGACACACACTCCAGAACAGATGGTATCC...CCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAATTATAAACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
||
| CDS-3UTR CCA 90 bp | ATAATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTCCTCTGGTTTCAATTTaGACACAGAAGGGAAACGGT | + |
|
Preference number: 4 (lower is better) Translates to: IIRKMAVCRPSLTFQRDAPLVSI*TQKGNG Trigger: ACCGTTTCCCTTCTGTGTCCAAATTGAAACCAGAGG...AGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAATTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
||
| CDS-3UTR CCA 90 bp | TTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGTAAGGTCAAATATGATTaGAGGGTTGGTCGGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LEKWQFVDRPSHSNGMLSKVKYD*RVGRLK Trigger: TTTCAACCGACCAACCCTCCAATCATATTTGACCTT...ACTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTTATAATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGGAGCCCTGTGGGTTTaGAAGGTCAAATATGATTGG | + |
|
Preference number: 4 (lower is better) Translates to: EFIIRKMAVCRPSLTFQRGALWV*KVKYDW Trigger: CCAATCATATTTGACCTTCCAAACCCACAGGGCTCC...CCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAATTATAAACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
||
| CDS-3UTR GCA 90 bp | ATATATATAAATCCACATGGAAAGGGAGTCTGCACACTTTCTTTTTCCTTGCATAGTGTGTGTCTGAGATaGAGACAAACCGCGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IYINPHGKGVCTLSFSLHSVCLR*RQTACG Trigger: GCCACACGCGGTTTGTCTGCATCTCAGACACACACT...ATGCAAGGAAAAAGAAAGTGTGCAGACTCCCTTTCCATGTGGATTTATATATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTTATAATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGCCTTTGAAGTTCCTTTaGAACCCAGTCTCGAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: EFIIRKMAVCRPSLTFQRPLKFL*NPVSKT Trigger: GGTTTTCGAGACTGGGTTCCAAAGGAACTTCAAAGG...CCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAATTATAAACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
||
| CDS-3UTR TCA 90 bp | TTAGCAACAATATTTTGTGCTAGCGAAGATTGCATCAACACACAGTGCAAAATGATGGTAACTTTGCCTTaGGAAGGAATCCCATGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LATIFCASEDCINTQCKMMVTLP*EGIPCA Trigger: GGCACATGGGATTCCTTCTCAAGGCAAAGTTACCAT...CATTTTGCACTGTGTGTTGATGCAATCTTCGCTAGCACAAAATATTGTTGCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
||
| CDS-3UTR CCA 90 bp | ATAATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTAAGGTCAAATATGATTaGAGGGTTGGTCGGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: IIRKMAVCRPSLTFQRDAKVKYD*RVGRLK Trigger: TTTCAACCGACCAACCCTCCAATCATATTTGACCTT...AGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAATTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
||
| CDS-3UTR CCA 90 bp | TTAGCAACAATATTTTGTGCTAGCGAAGATTGCATCAACACACAGTGCAAAATGCCTTTGAAGTTCCTTTaGAACCCAGTCTCGAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: LATIFCASEDCINTQCKMPLKFL*NPVSKT Trigger: GGTTTTCGAGACTGGGTTCCAAAGGAACTTCAAAGG...CATTTTGCACTGTGTGTTGATGCAATCTTCGCTAGCACAAAATATTGTTGCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
||
| CDS-3UTR CCA 90 bp | ATATATATAAATCCACATGGAAAGGGAGTCTGCACACTTTCTTTTTCCTTGCATGGAGCCCTGTGGGTTTaGAAGGTCAAATATGATTGG | + |
|
Preference number: 4 (lower is better) Translates to: IYINPHGKGVCTLSFSLHGALWV*KVKYDW Trigger: CCAATCATATTTGACCTTCCAAACCCACAGGGCTCC...ATGCAAGGAAAAAGAAAGTGTGCAGACTCCCTTTCCATGTGGATTTATATATAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
||
| CDS-3UTR TCA 90 bp | GAGTTTATAATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGTTTCACGGTTACCTCTaGATCTTGCAAGTAAATACT | + |
|
Preference number: 4 (lower is better) Translates to: EFIIRKMAVCRPSLTFQRFHGYL*ILQVNT Trigger: AGTATTTACTTGCAAGATTCAGAGGTAACCGTGAAA...CCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAATTATAAACTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
||
| CDS GCA 90 bp | CGTACCCTTCGTGAATCCCACCGAACACATGGAGCTTGGGCCGAATaGGCCTCTGGACTGTGTTTAAGAGCTCCACGCAGCCCACCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RTLRESHRTHGAWAE*ASGLCLRAPRSPPF Trigger: AAAGGGTGGGCTGCGTGGAGCTCTTAAACACAGTCCAGAGGCGCATTCGGCCCAAGCTCCATGTGTTCGGTGGGATTCACGAAGGGTACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 ENSMUST00000125023.2 |
||
| CDS TCA 90 bp | ATGCGCCTCTGGACTGTGTTTAAGAGCTCCACGCAGCCCACCCTTTaGAGTTCCTTTGGAACCCAGTCTCGAAAACCTAGAGGAGGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: MRLWTVFKSSTQPTL*SSFGTQSRKPRGGP Trigger: CGGACCTCCTCTAGGTTTTCGAGACTGGGTTCCAAAGGAACTTCAAAGGGTGGGCTGCGTGGAGCTCTTAAACACAGTCCAGAGGCGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 ENSMUST00000125023.2 |
||
| CDS CCA 90 bp | CCATCTGTTCTGGAGTGTGTGTCTGAGATGCAGACAAACCGCGTGTaGCCCGCTGGTTTTGGAGTGTCATATGGGATGGGGTCGACCATA | + |
|
Preference number: 5 (lower is better) Translates to: PSVLECVSEMQTNRV*PAGFGVSYGMGSTI Trigger: TATGGTCGACCCCATCCCATATGACACTCCAAAACCAGCGGGCCACACGCGGTTTGTCTGCATCTCAGACACACACTCCAGAACAGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 ENSMUST00000125023.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGTGCTGTGGCCCGCTGGTTTaGGAGTGTCATATGGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: RKMAVCRPSLTFQRDAECCGPLV*ECHMGW Trigger: CCATCCCATATGACACTCCAAAACCAGCGGGCCACA...GCACTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
||
| CDS-3UTR CAA 90 bp | AGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGTGCTGGAGGGTTGGTCGGTaGAAAGCTGACTGTACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RKMAVCRPSLTFQRDAECWRVGR*KADCTG Trigger: ACCTGTACAGTCAGCTTTCAACCGACCAACCCTCCA...GCACTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
||
| CDS-3UTR CAA 90 bp | ATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGCACGCAGCCCACCCTTaGAAGTTCCTTTGGAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: IRKMAVCRPSLTFQRDAEHAAHP*KFLWNP Trigger: TGGGTTCCAAAGGAACTTCAAAGGGTGGGCTGCGTG...CTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
||
| CDS-3UTR CAA 90 bp | TTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGTCACGCAGCCCACCCTTaGAAGTTCCTTTGGAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: LEKWQFVDRPSHSNGMLSHAAHP*KFLWNP Trigger: TGGGTTCCAAAGGAACTTCAAAGGGTGGGCTGCGTG...ACTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
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| CDS-3UTR CAA 90 bp | GAGTTTATAATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGCCGAACACATGGAGCTaGGGCCGAATGCGCCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: EFIIRKMAVCRPSLTFQRPNTWS*GRMRLW Trigger: CCAGAGGCGCATTCGGCCCAAGCTCCATGTGTTCGG...CCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAATTATAAACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
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| CDS-3UTR CAA 90 bp | ATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGGGGATTAGGTTCCATTaGTCCAGCAGAGACTGGCCT | + |
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Preference number: 5 (lower is better) Translates to: IRKMAVCRPSLTFQRDAEGIRFH*SSRDWP Trigger: AGGCCAGTCTCTGCTGGACAAATGGAACCTAATCCC...CTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
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| CDS-3UTR CAA 90 bp | CCCCACCTCAGACACAGTCTTCTTTATAGCCAGAGAGAAGCTAAGGTTTTTCCTGGGATTAGGTTCCATTaGTCCAGCAGAGACTGGCCT | + |
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Preference number: 5 (lower is better) Translates to: PHLRHSLLYSQREAKVFPGIRFH*SSRDWP Trigger: AGGCCAGTCTCTGCTGGACAAATGGAACCTAATCCC...AGGAAAAACCTTAGCTTCTCTCTGGCTATAAAGAAGACTGTGTCTGAGGTGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
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| CDS-3UTR CAA 90 bp | AGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGTGCCCCTTTGAAGTTCCTTaGGAACCCAGTCTCGAAAAC | + |
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Preference number: 5 (lower is better) Translates to: RKMAVCRPSLTFQRDAECPFEVP*EPSLEN Trigger: GTTTTCGAGACTGGGTTCCAAAGGAACTTCAAAGGG...GCACTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
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| CDS-3UTR CAA 90 bp | TTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGTTGGAGGGTTGGTCGGTaGAAAGCTGACTGTACAGGT | + |
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Preference number: 5 (lower is better) Translates to: LEKWQFVDRPSHSNGMLSWRVGR*KADCTG Trigger: ACCTGTACAGTCAGCTTTCAACCGACCAACCCTCCA...ACTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
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| CDS TCA 90 bp | AAATATGATTGGAGGGTTGGTCGGTTGAAAGCTGACTGTACAGGTTaGGGCATTGATGTAGGTGGTGTAACCGTCGGTCATGATGCCGTA | + |
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Preference number: 5 (lower is better) Translates to: KYDWRVGRLKADCTG*GIDVGGVTVGHDAV Trigger: TACGGCATCATGACCGACGGTTACACCACCTACATCAATGCCTCAACCTGTACAGTCAGCTTTCAACCGACCAACCCTCCAATCATATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
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| CDS-3UTR CAA 90 bp | CCGATGTGGCTTTGCAGTTGTACTGTCCTTGGCAAGATTAAACTCCCAACTGAGTATGGTAACTTTGCCTaGAGAAGGAATCCCATGTGC | + |
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Preference number: 5 (lower is better) Translates to: PMWLCSCTVLGKIKLPTEYGNFA*RRNPMC Trigger: GCACATGGGATTCCTTCTCAAGGCAAAGTTACCATA...CTCAGTTGGGAGTTTAATCTTGCCAAGGACAGTACAACTGCAAAGCCACATCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
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| CDS-3UTR CAA 90 bp | CTTTGGCAAATACTAACAATTTACAATGGCGTGGCCTTTGAGCAAACAGAAGTCTGTGGCCCGCTGGTTTaGGAGTGTCATATGGGATGG | + |
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Preference number: 5 (lower is better) Translates to: LWQILTIYNGVAFEQTEVCGPLV*ECHMGW Trigger: CCATCCCATATGACACTCCAAAACCAGCGGGCCACA...GACTTCTGTTTGCTCAAAGGCCACGCCATTGTAAATTGTTAGTATTTGCCAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111063.8 |
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| CDS-3UTR CAA 90 bp | TTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGTCCCTTTGAAGTTCCTTaGGAACCCAGTCTCGAAAAC | + |
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Preference number: 5 (lower is better) Translates to: LEKWQFVDRPSHSNGMLSPFEVP*EPSLEN Trigger: GTTTTCGAGACTGGGTTCCAAAGGAACTTCAAAGGG...ACTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
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| CDS TCA 90 bp | GGTCCAGGGTGCACCGTATATCCTGAATCCTTTCACGGTTACCTCTaGATCTTGCAAGTAAATACTGTTTGTCAGGAGGGACTGAACATT | + |
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Preference number: 5 (lower is better) Translates to: GPGCTVYPESFHGYL*ILQVNTVCQEGLNI Trigger: AATGTTCAGTCCCTCCTGACAAACAGTATTTACTTGCAAGATTCAGAGGTAACCGTGAAAGGATTCAGGATATACGGTGCACCCTGGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 ENSMUST00000125023.2 |
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| CDS-3UTR CAA 90 bp | ATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTGAGGCAAGTAAATACTGTTaGTCAGGAGGGACTGAACAT | + |
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Preference number: 5 (lower is better) Translates to: IRKMAVCRPSLTFQRDAEASKYC*SGGTEH Trigger: ATGTTCAGTCCCTCCTGACAAACAGTATTTACTTGC...CTCAGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
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| CDS-3UTR CAA 90 bp | ATAATTAGAAAAATGGCAGTTTGTAGACCGTCCCTCACATTCCAACGGGATGCTTATGGTAACTTTGCCTaGAGAAGGAATCCCATGTGC | + |
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Preference number: 5 (lower is better) Translates to: IIRKMAVCRPSLTFQRDAYGNFA*RRNPMC Trigger: GCACATGGGATTCCTTCTCAAGGCAAAGTTACCATA...AGCATCCCGTTGGAATGTGAGGGACGGTCTACAAACTGCCATTTTTCTAATTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 |
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| CDS GCA 90 bp | TTTGGACACAGAAGGGAAACGGTAGTAGTCCTGTTTAACGAGGTCTaGCATGAATTCCTTATCAAATGTCAGTTCATGATTCCCAGCAAT | + |
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Preference number: 5 (lower is better) Translates to: FGHRRETVVVLFNEV*HEFLIKCQFMIPSN Trigger: ATTGCTGGGAATCATGAACTGACATTTGATAAGGAATTCATGGCAGACCTCGTTAAACAGGACTACTACCGTTTCCCTTCTGTGTCCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 ENSMUST00000125023.2 |
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| CDS CCA 90 bp | GTAAATACTGTTTGTCAGGAGGGACTGAACATTGTCAAAGTCCTCTaGTTTCAATTTGGACACAGAAGGGAAACGGTAGTAGTCCTGTTT | + |
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Preference number: 5 (lower is better) Translates to: VNTVCQEGLNIVKVL*FQFGHRRETVVVLF Trigger: AAACAGGACTACTACCGTTTCCCTTCTGTGTCCAAATTGAAACCAGAGGACTTTGACAATGTTCAGTCCCTCCTGACAAACAGTATTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 ENSMUST00000125023.2 |
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| CDS CCA 72 bp | CCACCGAACACATGGAGCTTGGGCCGAATGCGCCTCTaGACTGTGTTTAAGAGCTCCACGCAGCCCACCCTT | + |
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Preference number: 6 (lower is better) Translates to: PPNTWSLGRMRL*TVFKSSTQPTL Trigger: AAGGGTGGGCTGCGTGGAGCTCTTAAACACAGTCCAGAGGCGCATTCGGCCCAAGCTCCATGTGTTCGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 ENSMUST00000125023.2 |
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| CDS GCA 72 bp | CGTGAATCCCACCGAACACATGGAGCTTGGGCCGAATaGGCCTCTGGACTGTGTTTAAGAGCTCCACGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RESHRTHGAWAE*ASGLCLRAPRS Trigger: GCTGCGTGGAGCTCTTAAACACAGTCCAGAGGCGCATTCGGCCCAAGCTCCATGTGTTCGGTGGGATTCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 ENSMUST00000125023.2 |
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| CDS CCA 72 bp | AAACCGCGTGTGGCCCGCTGGTTTTGGAGTGTCATATaGGATGGGGTCGACCATATGTACATGTGGCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: KPRVARWFWSVI*DGVDHMYMWRL Trigger: CAGCCGCCACATGTACATATGGTCGACCCCATCCCATATGACACTCCAAAACCAGCGGGCCACACGCGGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 ENSMUST00000125023.2 ENSMUST00000144155.8 |
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| CDS CCA 72 bp | CTGGAGTGTGTGTCTGAGATGCAGACAAACCGCGTGTaGCCCGCTGGTTTTGGAGTGTCATATGGGATGGGG | + |
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Preference number: 6 (lower is better) Translates to: LECVSEMQTNRV*PAGFGVSYGMG Trigger: CCCCATCCCATATGACACTCCAAAACCAGCGGGCCACACGCGGTTTGTCTGCATCTCAGACACACACTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 ENSMUST00000125023.2 |
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| CDS CCA 72 bp | CGTACCCTTCGTGAATCCCACCGAACACATGGAGCTTaGGCCGAATGCGCCTCTGGACTGTGTTTAAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: RTLRESHRTHGA*AECASGLCLRA Trigger: AGCTCTTAAACACAGTCCAGAGGCGCATTCGGCCCAAGCTCCATGTGTTCGGTGGGATTCACGAAGGGTACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 ENSMUST00000125023.2 |
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| CDS CAA 90 bp | AGTGTGTGTCTGAGATGCAGACAAACCGCGTGTGGCCCGCTGGTTTaGGAGTGTCATATGGGATGGGGTCGACCATATGTACATGTGGCG | + |
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Preference number: 6 (lower is better) Translates to: SVCLRCRQTACGPLV*ECHMGWGRPYVHVA Trigger: CGCCACATGTACATATGGTCGACCCCATCCCATATGACACTCCAAAACCAGCGGGCCACACGCGGTTTGTCTGCATCTCAGACACACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 ENSMUST00000125023.2 |
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| CDS GCA 72 bp | TCTGGATACCATCTGTTCTGGAGTGTGTGTCTGAGATaGAGACAAACCGCGTGTGGCCCGCTGGTTTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: SGYHLFWSVCLR*RQTACGPLVLE Trigger: CTCCAAAACCAGCGGGCCACACGCGGTTTGTCTGCATCTCAGACACACACTCCAGAACAGATGGTATCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 ENSMUST00000125023.2 |
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| CDS CAA 72 bp | CTGAGATGCAGACAAACCGCGTGTGGCCCGCTGGTTTaGGAGTGTCATATGGGATGGGGTCGACCATATGTA | + |
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Preference number: 6 (lower is better) Translates to: LRCRQTACGPLV*ECHMGWGRPYV Trigger: TACATATGGTCGACCCCATCCCATATGACACTCCAAAACCAGCGGGCCACACGCGGTTTGTCTGCATCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 ENSMUST00000125023.2 ENSMUST00000144155.8 |
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| CDS CAA 90 bp | CCGTGTGTCATGAGTATGTCGATGCCCTCAGGGATTAGGTTCCATTaGTCCAGCAGAGACTGGCCTCTGGGTAGGTTAAAGCCCCATCCA | + |
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Preference number: 6 (lower is better) Translates to: PCVMSMSMPSGIRFH*SSRDWPLGRLKPHP Trigger: TGGATGGGGCTTTAACCTACCCAGAGGCCAGTCTCTGCTGGACAAATGGAACCTAATCCCTGAGGGCATCGACATACTCATGACACACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 ENSMUST00000125023.2 |
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| CDS CAA 72 bp | TTAAGAGCTCCACGCAGCCCACCCTTTGAAGTTCCTTaGGAACCCAGTCTCGAAAACCTAGAGGAGGTCCGT | + |
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Preference number: 6 (lower is better) Translates to: LRAPRSPPFEVP*EPSLENLEEVR Trigger: ACGGACCTCCTCTAGGTTTTCGAGACTGGGTTCCAAAGGAACTTCAAAGGGTGGGCTGCGTGGAGCTCTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 ENSMUST00000125023.2 |
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| CDS TCA 72 bp | CCCAGTCTCGAAAACCTAGAGGAGGTCCGTGTGTCATaGGTATGTCGATGCCCTCAGGGATTAGGTTCCATT | + |
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Preference number: 6 (lower is better) Translates to: PSLENLEEVRVS*VCRCPQGLGSI Trigger: AATGGAACCTAATCCCTGAGGGCATCGACATACTCATGACACACGGACCTCCTCTAGGTTTTCGAGACTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 ENSMUST00000125023.2 |
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| CDS TCA 72 bp | TGGACTGTGTTTAAGAGCTCCACGCAGCCCACCCTTTaGAGTTCCTTTGGAACCCAGTCTCGAAAACCTAGA | + |
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Preference number: 6 (lower is better) Translates to: WTVFKSSTQPTL*SSFGTQSRKPR Trigger: TCTAGGTTTTCGAGACTGGGTTCCAAAGGAACTTCAAAGGGTGGGCTGCGTGGAGCTCTTAAACACAGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 ENSMUST00000125023.2 |
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| CDS CAA 72 bp | ATGAGTATGTCGATGCCCTCAGGGATTAGGTTCCATTaGTCCAGCAGAGACTGGCCTCTGGGTAGGTTAAAG | + |
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Preference number: 6 (lower is better) Translates to: MSMSMPSGIRFH*SSRDWPLGRLK Trigger: CTTTAACCTACCCAGAGGCCAGTCTCTGCTGGACAAATGGAACCTAATCCCTGAGGGCATCGACATACTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 ENSMUST00000125023.2 |
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| CDS CCA 72 bp | GTTTGTCAGGAGGGACTGAACATTGTCAAAGTCCTCTaGTTTCAATTTGGACACAGAAGGGAAACGGTAGTA | + |
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Preference number: 6 (lower is better) Translates to: VCQEGLNIVKVL*FQFGHRRETVV Trigger: TACTACCGTTTCCCTTCTGTGTCCAAATTGAAACCAGAGGACTTTGACAATGTTCAGTCCCTCCTGACAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 ENSMUST00000125023.2 |
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| CDS TCA 72 bp | TGCACCGTATATCCTGAATCCTTTCACGGTTACCTCTaGATCTTGCAAGTAAATACTGTTTGTCAGGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: CTVYPESFHGYL*ILQVNTVCQEG Trigger: TCCCTCCTGACAAACAGTATTTACTTGCAAGATTCAGAGGTAACCGTGAAAGGATTCAGGATATACGGTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 ENSMUST00000125023.2 |
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| CDS CAA 72 bp | TCACGGTTACCTCTGAATCTTGCAAGTAAATACTGTTaGTCAGGAGGGACTGAACATTGTCAAAGTCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SRLPLNLASKYC*SGGTEHCQSPL Trigger: CAGAGGACTTTGACAATGTTCAGTCCCTCCTGACAAACAGTATTTACTTGCAAGATTCAGAGGTAACCGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 ENSMUST00000125023.2 |
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| CDS GCA 72 bp | AGAAGGGAAACGGTAGTAGTCCTGTTTAACGAGGTCTaGCATGAATTCCTTATCAAATGTCAGTTCATGATT | + |
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Preference number: 6 (lower is better) Translates to: RRETVVVLFNEV*HEFLIKCQFMI Trigger: AATCATGAACTGACATTTGATAAGGAATTCATGGCAGACCTCGTTAAACAGGACTACTACCGTTTCCCTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016530.14 ENSMUST00000111063.8 ENSMUST00000125023.2 |
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