Pregenerated sensors for MPPE1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062526Ensembl transcript IDs: ENSMUST00000073054.5
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAATGTTTAGGAGCACACATAGCCTCGAGTGTGCACCAAAGCTGCTaGGTCCTTCCTGTGGAAGAAAGGACTGTGTGTCATGCATGCGAG | + |
|
Preference number: 1 (lower is better) Translates to: QCLGAHIASSVHQSC*VLPVEERTVCHACE Trigger: CTCGCATGCATGACACACAGTCCTTTCTTCCACAGGAAGGACCCAGCAGCTTTGGTGCACACTCGAGGCTATGTGTGCTCCTAAACATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| 3UTR GCA 90 bp | CCAAAGCTGCTGGGTCCTTCCTGTGGAAGAAAGGACTGTGTGTCATaGATGCGAGTGGTAGTGTCCATGACATTTACATTCCATACCTAT | + |
|
Preference number: 1 (lower is better) Translates to: PKLLGPSCGRKDCVS*MRVVVSMTFTFHTY Trigger: ATAGGTATGGAATGTAAATGTCATGGACACTACCACTCGCATGCATGACACACAGTCCTTTCTTCCACAGGAAGGACCCAGCAGCTTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| 3UTR CCA 72 bp | CCTCGAGTGTGCACCAAAGCTGCTGGGTCCTTCCTGTaGAAGAAAGGACTGTGTGTCATGCATGCGAGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: PRVCTKAAGSFL*KKGLCVMHASG Trigger: ACCACTCGCATGCATGACACACAGTCCTTTCTTCCACAGGAAGGACCCAGCAGCTTTGGTGCACACTCGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| 3UTR GCA 72 bp | AGAATCCCCACCATGTACATAGGAACAACCAGCATTTaGTCTCCTCCGGGACTTGCAGGACCCTCGCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: RIPTMYIGTTSI*SPPGLAGPSLE Trigger: TTCCAGCGAGGGTCCTGCAAGTCCCGGAGGAGAGCAAATGCTGGTTGTTCCTATGTACATGGTGGGGATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| 3UTR CCA 72 bp | GGAGCACACATAGCCTCGAGTGTGCACCAAAGCTGCTaGGTCCTTCCTGTGGAAGAAAGGACTGTGTGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: GAHIASSVHQSC*VLPVEERTVCH Trigger: ATGACACACAGTCCTTTCTTCCACAGGAAGGACCCAGCAGCTTTGGTGCACACTCGAGGCTATGTGTGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| 3UTR GCA 72 bp | TTAGGAGCACACATAGCCTCGAGTGTGCACCAAAGCTaGTGGGTCCTTCCTGTGGAAGAAAGGACTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LGAHIASSVHQS*WVLPVEERTVC Trigger: ACACACAGTCCTTTCTTCCACAGGAAGGACCCAGCAGCTTTGGTGCACACTCGAGGCTATGTGTGCTCCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTGTGGAAGAAAGGACTGTGTGTCATGCATGCGAGTGGTAGTGTCCATGACAGGAACAACCAGCATTaGCTCTCCTCCGGGACTTGC | + |
|
Preference number: 3 (lower is better) Translates to: FLWKKGLCVMHASGSVHDRNNQH*LSSGTC Trigger: GCAAGTCCCGGAGGAGAGCAAATGCTGGTTGTTCCT...GTCATGGACACTACCACTCGCATGCATGACACACAGTCCTTTCTTCCACAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAAACACAAAAGCCTTTAGTCCTACTCATTGAATCTGTACTTTTGAGCATAGCTCTCCTCCGGGACTaGCAGGACCCTCGCTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: TETQKPLVLLIESVLLSIALLRD*QDPRWK Trigger: CTTCCAGCGAGGGTCCTGCAAGTCCCGGAGGAGAGC...TATGCTCAAAAGTACAGATTCAATGAGTAGGACTAAAGGCTTTTGTGTTTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGTACAGAGAAGCCCCAATGTTTAGGAGCACACATAGCCTCGAGTGTGCACTATAGGTCTTTGGCTTaGATTCGTATCACCATACAC | + |
|
Preference number: 3 (lower is better) Translates to: RSTEKPQCLGAHIASSVHYRSLA*IRITIH Trigger: GTGTATGGTGATACGAATCAAAGCCAAAGACCTATA...GTGCACACTCGAGGCTATGTGTGCTCCTAAACATTGGGGCTTCTCTGTACTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| CDS-3UTR CCA 90 bp | AGAAGTACAGAGAAGCCCCAATGTTTAGGAGCACACATAGCCTCGAGTGTGCACCTCAGGGGCTCCTCCTaGGTGGAGCACCTCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSTEKPQCLGAHIASSVHLRGSS*VEHLTG Trigger: GCCTGTGAGGTGCTCCACCCAGGAGGAGCCCCTGAG...GTGCACACTCGAGGCTATGTGTGCTCCTAAACATTGGGGCTTCTCTGTACTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| CDS-3UTR TCA 90 bp | GTGCACCAAAGCTGCTGGGTCCTTCCTGTGGAAGAAAGGACTGTGTGTCATGCATTCGGTTCCTCCAACTaGAAGATGGGACGCTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: VHQSCWVLPVEERTVCHAFGSSN*KMGRSP Trigger: AGGTGAGCGTCCCATCTTTCAGTTGGAGGAACCGAA...TGCATGACACACAGTCCTTTCTTCCACAGGAAGGACCCAGCAGCTTTGGTGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| CDS-3UTR GCA 90 bp | TTCCTGTGGAAGAAAGGACTGTGTGTCATGCATGCGAGTGGTAGTGTCCATGACTCTCTGCACATCGTCTaGCCAGGCCTGATCGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLWKKGLCVMHASGSVHDSLHIV*PGLIGA Trigger: AGCTCCGATCAGGCCTGGGCAGACGATGTGCAGAGA...GTCATGGACACTACCACTCGCATGCATGACACACAGTCCTTTCTTCCACAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| CDS-3UTR GCA 90 bp | ACAGAGAAGCCCCAATGTTTAGGAGCACACATAGCCTCGAGTGTGCACCAAAGCCTGGATCCCGGCACCTaGTCTTGGGAGCAATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TEKPQCLGAHIASSVHQSLDPGT*SWEQFS Trigger: ACTGAATTGCTCCCAAGAGCAGGTGCCGGGATCCAG...GCTTTGGTGCACACTCGAGGCTATGTGTGCTCCTAAACATTGGGGCTTCTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| CDS-3UTR TCA 90 bp | AAAGCTGCTGGGTCCTTCCTGTGGAAGAAAGGACTGTGTGTCATGCATGCGAGTCCACAACAGCTTTTGTaGGGCCTCCCGAGAAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KAAGSFLWKKGLCVMHASPQQLL*GLPRKN Trigger: GTTCTTTCTCGGGAGGCCTCACAAAAGCTGTTGTGG...ACTCGCATGCATGACACACAGTCCTTTCTTCCACAGGAAGGACCCAGCAGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGCTGGGTCCTTCCTGTGGAAGAAAGGACTGTGTGTCATGCATGCGAGTTCCTGCCTGCCTCCATaGGCTAAAGTCTTCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KAAGSFLWKKGLCVMHASSCLPP*AKVFTS Trigger: TGAGGTGAAGACTTTAGCCCATGGAGGCAGGCAGGA...ACTCGCATGCATGACACACAGTCCTTTCTTCCACAGGAAGGACCCAGCAGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGCTGGGTCCTTCCTGTGGAAGAAAGGACTGTGTGTCATGCATGCGAGTACGGGAGGTAGCACTTaGACAGAGCGTAATCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KAAGSFLWKKGLCVMHASTGGST*TERNLW Trigger: CCAGAGATTACGCTCTGTCCAAGTGCTACCTCCCGT...ACTCGCATGCATGACACACAGTCCTTTCTTCCACAGGAAGGACCCAGCAGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| CDS-3UTR TCA 90 bp | GAGAACAGTACAGTCAACCATTTATTCCGTAGTCACGTTGAAGATTCAGAATCCGGCTCACGGTCACACTaGCTGGATCCCGGCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ENSTVNHLFRSHVEDSESGSRSH*LDPGTC Trigger: GCAGGTGCCGGGATCCAGTCAGTGTGACCGTGAGCC...GGATTCTGAATCTTCAACGTGACTACGGAATAAATGGTTGACTGTACTGTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| CDS-3UTR GCA 90 bp | AAAGCTGCTGGGTCCTTCCTGTGGAAGAAAGGACTGTGTGTCATGCATGCGAGTTCCTCATGTGCAACCTaGACAGTTTCCAGCCACACA | + |
|
Preference number: 4 (lower is better) Translates to: KAAGSFLWKKGLCVMHASSSCAT*TVSSHT Trigger: TGTGTGGCTGGAAACTGTGCAGGTTGCACATGAGGA...ACTCGCATGCATGACACACAGTCCTTTCTTCCACAGGAAGGACCCAGCAGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| CDS-3UTR CCA 90 bp | GTGCACCAAAGCTGCTGGGTCCTTCCTGTGGAAGAAAGGACTGTGTGTCATGCAGCCCATGATGAAACTTaGGTTGTTTCGGTTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VHQSCWVLPVEERTVCHAAHDET*VVSVPP Trigger: TGGAGGAACCGAAACAACCCAAGTTTCATCATGGGC...TGCATGACACACAGTCCTTTCTTCCACAGGAAGGACCCAGCAGCTTTGGTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| 3UTR CAA 72 bp | CAGGACCCTCGCTGGAAGTCCTATAGGTCTTTGGCTTaGATTCGTATCACCATACACAACAGTCACCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QDPRWKSYRSLA*IRITIHNSHRL Trigger: GAGCCGGTGACTGTTGTGTATGGTGATACGAATCAAAGCCAAAGACCTATAGGACTTCCAGCGAGGGTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| CDS-3UTR GCA 90 bp | TTCCTGTGGAAGAAAGGACTGTGTGTCATGCATGCGAGTGGTAGTGTCCATGACATGACCACCTTCAGCTaGACATGGCTGTCATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLWKKGLCVMHASGSVHDMTTFS*TWLSCL Trigger: CAGACATGACAGCCATGTGCAGCTGAAGGTGGTCAT...GTCATGGACACTACCACTCGCATGCATGACACACAGTCCTTTCTTCCACAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| CDS-3UTR CCA 90 bp | GTGTCATGCATGCGAGTGGTAGTGTCCATGACATTTACATTCCATACCTATGGACCGCTGCACCGTACATaGTCAGCACCGTGTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VSCMRVVVSMTFTFHTYGPLHRT*SAPCPQ Trigger: TTGAGGACACGGTGCTGACCATGTACGGTGCAGCGG...TCCATAGGTATGGAATGTAAATGTCATGGACACTACCACTCGCATGCATGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| CDS-3UTR TCA 90 bp | CTGTGGAAGAAAGGACTGTGTGTCATGCATGCGAGTGGTAGTGTCCATGACATTCGTCATGATTGCCAATaGCCACCTTCAGCTGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: LWKKGLCVMHASGSVHDIRHDCQ*PPSAAH Trigger: ATGTGCAGCTGAAGGTGGTCATTGGCAATCATGACG...AATGTCATGGACACTACCACTCGCATGCATGACACACAGTCCTTTCTTCCACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| CDS-3UTR CCA 90 bp | TTCCTGTGGAAGAAAGGACTGTGTGTCATGCATGCGAGTGGTAGTGTCCATGACACCTTCAGCTGCACATaGCTGTCATGTCTGAACATC | + |
|
Preference number: 4 (lower is better) Translates to: FLWKKGLCVMHASGSVHDTFSCT*LSCLNI Trigger: GATGTTCAGACATGACAGCCATGTGCAGCTGAAGGT...GTCATGGACACTACCACTCGCATGCATGACACACAGTCCTTTCTTCCACAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| CDS-3UTR TCA 90 bp | TGTGGAAGAAAGGACTGTGTGTCATGCATGCGAGTGGTAGTGTCCATGACATTTAGATGTCTCCCAAAATaGAGACGACTTCCGGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CGRKDCVSCMRVVVSMTFRCLPK*RRLPVA Trigger: TGCAACCGGAAGTCGTCTTCATTTTGGGAGACATCT...AAATGTCATGGACACTACCACTCGCATGCATGACACACAGTCCTTTCTTCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| CDS-3UTR CCA 90 bp | GTGTCATGCATGCGAGTGGTAGTGTCCATGACATTTACATTCCATACCTATGGACTCCTCCTCAACGGATaGAAGTTCTGTCTTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSCMRVVVSMTFTFHTYGLLLNG*KFCLFS Trigger: GCTGAAAAGACAGAACTTCCATCCGTTGAGGAGGAG...TCCATAGGTATGGAATGTAAATGTCATGGACACTACCACTCGCATGCATGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| CDS-3UTR TCA 90 bp | GTGTCATGCATGCGAGTGGTAGTGTCCATGACATTTACATTCCATACCTATGGATGTCTGAACATCCTCTaGAATCTCTGCACATCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSCMRVVVSMTFTFHTYGCLNIL*NLCTSS Trigger: AGACGATGTGCAGAGATTTCAGAGGATGTTCAGACA...TCCATAGGTATGGAATGTAAATGTCATGGACACTACCACTCGCATGCATGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| CDS-3UTR TCA 90 bp | GTGTCATGCATGCGAGTGGTAGTGTCCATGACATTTACATTCCATACCTATGGACATGGCTGTCATGTCTaGACATCCTCTGAAATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSCMRVVVSMTFTFHTYGHGCHV*TSSEIS Trigger: AGAGATTTCAGAGGATGTTCAGACATGACAGCCATG...TCCATAGGTATGGAATGTAAATGTCATGGACACTACCACTCGCATGCATGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| CDS-3UTR TCA 90 bp | TGTGTCATGCATGCGAGTGGTAGTGTCCATGACATTTACATTCCATACCTATGGGGCAGATGCTCAAAGTaGACTAAGATGAGGATCATG | + |
|
Preference number: 4 (lower is better) Translates to: CVMHASGSVHDIYIPYLWGRCSK*TKMRIM Trigger: CATGATCCTCATCTTAGTTCACTTTGAGCATCTGCC...CCATAGGTATGGAATGTAAATGTCATGGACACTACCACTCGCATGCATGACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| 3UTR CAA 72 bp | AGAACAGTACAGTCAACCATTTATTCCGTAGTCACGTaGAAGATTCAGAATCCCCACCATGTACATAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RTVQSTIYSVVT*KIQNPHHVHRN Trigger: GTTCCTATGTACATGGTGGGGATTCTGAATCTTCAACGTGACTACGGAATAAATGGTTGACTGTACTGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| CDS TCA 90 bp | CTCAAAGGGGACGTTCCTTTCCTCTGGGGGAGCCGCATCTTCACCTaGACAGTTAGCATCGCTGGCCCGGTAGAGCGGGTAGTGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LKGDVPFLWGSRIFT*TVSIAGPVERVVLQ Trigger: CTGCAGCACTACCCGCTCTACCGGGCCAGCGATGCTAACTGTTCAGGTGAAGATGCGGCTCCCCCAGAGGAAAGGAACGTCCCCTTTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| CDS TCA 90 bp | CACAGTTTCCAGCCACACAGAAAAGGCGAGGGCAGATGCTCAAAGTaGACTAAGATGAGGATCATGAGGAAGCCAGCCGCTGCACCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: HSFQPHRKGEGRCSK*TKMRIMRKPAAAPY Trigger: GTACGGTGCAGCGGCTGGCTTCCTCATGATCCTCATCTTAGTTCACTTTGAGCATCTGCCCTCGCCTTTTCTGTGTGGCTGGAAACTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| CDS-3UTR CAA 90 bp | GTGTCATGCATGCGAGTGGTAGTGTCCATGACATTTACATTCCATACCTATGGATCCCGGCACCTGCTCTaGGGAGCAATTCAGTTTACG | + |
|
Preference number: 5 (lower is better) Translates to: VSCMRVVVSMTFTFHTYGSRHLL*GAIQFT Trigger: CGTAAACTGAATTGCTCCCAAGAGCAGGTGCCGGGA...TCCATAGGTATGGAATGTAAATGTCATGGACACTACCACTCGCATGCATGACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| CDS TCA 72 bp | GACGTTCCTTTCCTCTGGGGGAGCCGCATCTTCACCTaGACAGTTAGCATCGCTGGCCCGGTAGAGCGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: DVPFLWGSRIFT*TVSIAGPVERV Trigger: TACCCGCTCTACCGGGCCAGCGATGCTAACTGTTCAGGTGAAGATGCGGCTCCCCCAGAGGAAAGGAACGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| CDS CCA 72 bp | TGGTCAGCACCGTGTCCTCAAACGGGAGGTAGCACTTaGACAGAGCGTAATCTCTGGATGTCAGGCTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: WSAPCPQTGGST*TERNLWMSGCP Trigger: TGGGCAGCCTGACATCCAGAGATTACGCTCTGTCCAAGTGCTACCTCCCGTTTGAGGACACGGTGCTGACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| CDS TCA 72 bp | CAGCCACACAGAAAAGGCGAGGGCAGATGCTCAAAGTaGACTAAGATGAGGATCATGAGGAAGCCAGCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: QPHRKGEGRCSK*TKMRIMRKPAA Trigger: AGCGGCTGGCTTCCTCATGATCCTCATCTTAGTTCACTTTGAGCATCTGCCCTCGCCTTTTCTGTGTGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| CDS CCA 72 bp | TTCAACAGCAACGCTCTCCTCCTCCTCCTCAACGGATaGAAGTTCTGTCTTTTCAGCCCCCATCTGACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: FNSNALLLLLNG*KFCLFSPHLTR Trigger: TCTGGTCAGATGGGGGCTGAAAAGACAGAACTTCCATCCGTTGAGGAGGAGGAGGAGAGCGTTGCTGTTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| CDS CCA 72 bp | TTATCTCCCCAAGTAAGTGAGTGTCAGCCAGAAACATaGCTTTCAGTACAGGCTCCTGCCTGCCTCCATGGG | + |
|
Preference number: 6 (lower is better) Translates to: LSPQVSECQPET*LSVQAPACLHG Trigger: CCCATGGAGGCAGGCAGGAGCCTGTACTGAAAGCCATGTTTCTGGCTGACACTCACTTACTTGGGGAGATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| CDS CAA 72 bp | CATATGATACAACCATCCCCTTCCATTGCAACGCTGTaGACCATGACAAAATTAACTCCTTTCAGAGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: HMIQPSPSIATL*TMTKLTPFRES Trigger: GCTCTCTCTGAAAGGAGTTAATTTTGTCATGGTCAACAGCGTTGCAATGGAAGGGGATGGTTGTATCATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||
| CDS CAA 90 bp | TCTTCAGAGCATATGATACAACCATCCCCTTCCATTGCAACGCTGTaGACCATGACAAAATTAACTCCTTTCAGAGAGAGCAGTCTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSEHMIQPSPSIATL*TMTKLTPFRESSLS Trigger: TGAAAGACTGCTCTCTCTGAAAGGAGTTAATTTTGTCATGGTCAACAGCGTTGCAATGGAAGGGGATGGTTGTATCATATGCTCTGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073054.5 |
||