Pregenerated sensors for MPP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031402Ensembl transcript IDs: ENSMUST00000033775.9, ENSMUST00000114091.8, ENSMUST00000114092.8, ENSMUST00000127023.2, ENSMUST00000132501.8, ENSMUST00000153318.8, ENSMUST00000155742.2
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GAAGAGGTTGGAGGTACTCCAGGTAGGAAACTGCCAGTTTTGGTGTTGACTGCAGGGGGTGCGGGGAGGTaGCATTCCAAATGCTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: EEVGGTPGRKLPVLVLTAGGAGR*HSKCWL Trigger: CAGCCAGCATTTGGAATGCCACCTCCCCGCACCCCC...TGCAGTCAACACCAAAACTGGCAGTTTCCTACCTGGAGTACCTCCAACCTCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| 3UTR-3UTR GCA 90 bp | GAAGAGGTTGGAGGTACTCCAGGTAGGAAACTGCCAGTTTTGGTGTTGACTGCAAGGTGGCATTCCAAATaGTGGCTGAAACATGTTTGC | + |
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Preference number: 2 (lower is better) Translates to: EEVGGTPGRKLPVLVLTARWHSK*WLKHVC Trigger: GCAAACATGTTTCAGCCAGCATTTGGAATGCCACCT...TGCAGTCAACACCAAAACTGGCAGTTTCCTACCTGGAGTACCTCCAACCTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| 3UTR-3UTR TCA 90 bp | TTTATATTGTACTGGGCTTGTGAAGAGGTTGGAGGTACTCCAGGTAGGAAACTGACCCCTTTAGGAGCCTaGGTAAGAAAACAGCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: FILYWACEEVGGTPGRKLTPLGA*VRKQQS Trigger: GCTCTGCTGTTTTCTTACTCAGGCTCCTAAAGGGGT...CAGTTTCCTACCTGGAGTACCTCCAACCTCTTCACAAGCCCAGTACAATATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| 3UTR-3UTR CCA 90 bp | TTTATATTGTACTGGGCTTGTGAAGAGGTTGGAGGTACTCCAGGTAGGAAACTGTTGAAGCAACCCTTTTaGCTTAAGCAAGGGAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: FILYWACEEVGGTPGRKLLKQPF*LKQGRG Trigger: CCCCCTCCCTTGCTTAAGCCAAAAGGGTTGCTTCAA...CAGTTTCCTACCTGGAGTACCTCCAACCTCTTCACAAGCCCAGTACAATATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| 3UTR-3UTR CCA 90 bp | CCAGGTAGGAAACTGCCAGTTTTGGTGTTGACTGCAGAGGGAGCAGGGAACTTTGCATTTTTATTGCTTTaGAAGATTTTCCCTACAGCA | + |
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Preference number: 2 (lower is better) Translates to: PGRKLPVLVLTAEGAGNFAFLLL*KIFPTA Trigger: TGCTGTAGGGAAAATCTTCCAAAGCAATAAAAATGC...AAAGTTCCCTGCTCCCTCTGCAGTCAACACCAAAACTGGCAGTTTCCTACCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTACATTGGCACTGGGGCCTATCTGCTCTCAAGGGAGATCATTACTAATCCAGTTAATGTCATTGCTTaGAAGGTTAAGATTGGGAAT | + |
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Preference number: 2 (lower is better) Translates to: SYIGTGAYLLSREIITNPVNVIA*KVKIGN Trigger: ATTCCCAATCTTAACCTTCCAAGCAATGACATTAAC...TGGATTAGTAATGATCTCCCTTGAGAGCAGATAGGCCCCAGTGCCAATGTAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| 3UTR-3UTR CAA 90 bp | CCAGGTAGGAAACTGCCAGTTTTGGTGTTGACTGCAGAGGGAGCAGGGAACTTTCTTGGAAGGTTAAGATaGGGAATGGAGTTACAGGGT | + |
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Preference number: 3 (lower is better) Translates to: PGRKLPVLVLTAEGAGNFLGRLR*GMELQG Trigger: ACCCTGTAACTCCATTCCCAATCTTAACCTTCCAAG...AAAGTTCCCTGCTCCCTCTGCAGTCAACACCAAAACTGGCAGTTTCCTACCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| 3UTR TCA 72 bp | GAGGTACTCCAGGTAGGAAACTGCCAGTTTTGGTGTTaGCTGCAGAGGGAGCAGGGAACTTTGCTTAAATAT | + |
|
Preference number: 3 (lower is better) Translates to: EVLQVGNCQFWC*LQREQGTLLKY Trigger: ATATTTAAGCAAAGTTCCCTGCTCCCTCTGCAGTCAACACCAAAACTGGCAGTTTCCTACCTGGAGTACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| 3UTR-3UTR CAA 90 bp | GAAGAGGTTGGAGGTACTCCAGGTAGGAAACTGCCAGTTTTGGTGTTGACTGCAACAGCAGACATTCTATaGCACAGCTGTTTGATTTTG | + |
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Preference number: 3 (lower is better) Translates to: EEVGGTPGRKLPVLVLTATADIL*HSCLIL Trigger: CAAAATCAAACAGCTGTGCAATAGAATGTCTGCTGT...TGCAGTCAACACCAAAACTGGCAGTTTCCTACCTGGAGTACCTCCAACCTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| 3UTR-3UTR CAA 90 bp | CCAGGTAGGAAACTGCCAGTTTTGGTGTTGACTGCAGAGGGAGCAGGGAACTTTAGCATTTTTATTGCTTaGGAAGATTTTCCCTACAGC | + |
|
Preference number: 3 (lower is better) Translates to: PGRKLPVLVLTAEGAGNFSIFIA*EDFPYS Trigger: GCTGTAGGGAAAATCTTCCAAAGCAATAAAAATGCT...AAAGTTCCCTGCTCCCTCTGCAGTCAACACCAAAACTGGCAGTTTCCTACCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| 3UTR CCA 72 bp | GTTAAGAGGAAAGGGGTAGATGCATTTATATTGTACTaGGCTTGTGAAGAGGTTGGAGGTACTCCAGGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: VKRKGVDAFILY*ACEEVGGTPGR Trigger: CCTACCTGGAGTACCTCCAACCTCTTCACAAGCCCAGTACAATATAAATGCATCTACCCCTTTCCTCTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| 3UTR-3UTR CAA 90 bp | TCTTACATTGGCACTGGGGCCTATCTGCTCTCAAGGGAGATCATTACTAATCCAACAGCAGCATTTTTATaGCTTTGGAAGATTTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: SYIGTGAYLLSREIITNPTAAFL*LWKIFP Trigger: AGGGAAAATCTTCCAAAGCAATAAAAATGCTGCTGT...TGGATTAGTAATGATCTCCCTTGAGAGCAGATAGGCCCCAGTGCCAATGTAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| 3UTR CCA 72 bp | TTGAAAGCAAAGGAGCTCAGGCTTCAGGGGGACAGTTaGTTTATCTATGTAGCATTGCATTTGGTTATTCTT | + |
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Preference number: 3 (lower is better) Translates to: LKAKELRLQGDS*FIYVALHLVIL Trigger: AAGAATAACCAAATGCAATGCTACATAGATAAACCAACTGTCCCCCTGAAGCCTGAGCTCCTTTGCTTTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| 3UTR CCA 72 bp | GGTAATTCCCAGAGATCTTATGTTAATGTCATTGCTTaGAAGGTTAAGATTGGGAATGGAGTTACAGGGTCA | + |
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Preference number: 3 (lower is better) Translates to: GNSQRSYVNVIA*KVKIGNGVTGS Trigger: TGACCCTGTAACTCCATTCCCAATCTTAACCTTCCAAGCAATGACATTAACATAAGATCTCTGGGAATTACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| 3UTR CCA 72 bp | ACTTTTAAATTTCCTAATTCTGAGTCTTTCTTACATTaGCACTGGGGCCTATCTGCTCTCAAGGGAGATCAT | + |
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Preference number: 3 (lower is better) Translates to: TFKFPNSESFLH*HWGLSALKGDH Trigger: ATGATCTCCCTTGAGAGCAGATAGGCCCCAGTGCCAATGTAAGAAAGACTCAGAATTAGGAAATTTAAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| 3UTR TCA 72 bp | AGATATTTATTCCAGAGTAAAAAGACATTCTATAGTTaGAAGCAAAGGAGCTCAGGCTTCAGGGGGACAGTT | + |
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Preference number: 3 (lower is better) Translates to: RYLFQSKKTFYS*KQRSSGFRGTV Trigger: AACTGTCCCCCTGAAGCCTGAGCTCCTTTGCTTTCAACTATAGAATGTCTTTTTACTCTGGAATAAATATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| CDS-3UTR GCA 90 bp | GAAGAGGTTGGAGGTACTCCAGGTAGGAAACTGCCAGTTTTGGTGTTGACTGCACCCTCCACCCGCCCCTaGCACCAATTGCTGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: EEVGGTPGRKLPVLVLTAPSTRP*HQLLSS Trigger: AGATGACAGCAATTGGTGGCAGGGGCGGGTGGAGGG...TGCAGTCAACACCAAAACTGGCAGTTTCCTACCTGGAGTACCTCCAACCTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| CDS-3UTR CCA 90 bp | AAGGGAGGGGGTGCGGGGAGGTGGCATTCCAAATGCTGGCTGAAACATGTTTGCCTCACTCTTCTTTGGTaGCCGTGTTGTATATGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KGGGAGRWHSKCWLKHVCLTLLW*PCCIWG Trigger: GCCCCATATACAACACGGCCACCAAAGAAGAGTGAG...GCAAACATGTTTCAGCCAGCATTTGGAATGCCACCTCCCCGCACCCCCTCCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| 3UTR CAA 72 bp | GAGGTTGGAGGTACTCCAGGTAGGAAACTGCCAGTTTaGGTGTTGACTGCAGAGGGAGCAGGGAACTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EVGGTPGRKLPV*VLTAEGAGNFA Trigger: AGCAAAGTTCCCTGCTCCCTCTGCAGTCAACACCAAAACTGGCAGTTTCCTACCTGGAGTACCTCCAACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| CDS-3UTR GCA 90 bp | AAGGGAGGGGGTGCGGGGAGGTGGCATTCCAAATGCTGGCTGAAACATGTTTGCTGTTGCCCTGATAGCTaGCAAACTCCAAGAACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KGGGAGRWHSKCWLKHVCCCPDS*QTPRTH Trigger: ATGAGTTCTTGGAGTTTGGCAGCTATCAGGGCAACA...GCAAACATGTTTCAGCCAGCATTTGGAATGCCACCTCCCCGCACCCCCTCCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| CDS-3UTR CCA 90 bp | CTTAAGCAAGGGAGGGGGTGCGGGGAGGTGGCATTCCAAATGCTGGCTGAAACATTCCTCACTCTTCTTTaGTGGCCGTGTTGTATATGG | + |
|
Preference number: 4 (lower is better) Translates to: LKQGRGCGEVAFQMLAETFLTLL*WPCCIW Trigger: CCATATACAACACGGCCACCAAAGAAGAGTGAGGAA...TGTTTCAGCCAGCATTTGGAATGCCACCTCCCCGCACCCCCTCCCTTGCTTAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| CDS-3UTR TCA 90 bp | GAAGAGGTTGGAGGTACTCCAGGTAGGAAACTGCCAGTTTTGGTGTTGACTGCACCAAGGTCTTCCTCTTaGATGCAGGGAGCCGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: EEVGGTPGRKLPVLVLTAPRSSS*MQGAEQ Trigger: TTGTTCGGCTCCCTGCATTCAAGAGGAAGACCTTGG...TGCAGTCAACACCAAAACTGGCAGTTTCCTACCTGGAGTACCTCCAACCTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| CDS-3UTR GCA 90 bp | AAGGGAGGGGGTGCGGGGAGGTGGCATTCCAAATGCTGGCTGAAACATGTTTGCAACAAACTTCAGTCCTaGCTCCTTGCAAGGAATAAG | + |
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Preference number: 4 (lower is better) Translates to: KGGGAGRWHSKCWLKHVCNKLQS*LLARNK Trigger: CTTATTCCTTGCAAGGAGGCAGGACTGAAGTTTGTT...GCAAACATGTTTCAGCCAGCATTTGGAATGCCACCTCCCCGCACCCCCTCCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| CDS-3UTR CCA 90 bp | TTTATATTGTACTGGGCTTGTGAAGAGGTTGGAGGTACTCCAGGTAGGAAACTGATGGGCAGGGCTACCTaGAGCAGGGGACCCATTGGT | + |
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Preference number: 4 (lower is better) Translates to: FILYWACEEVGGTPGRKLMGRAT*SRGPIG Trigger: ACCAATGGGTCCCCTGCTCCAGGTAGCCCTGCCCAT...CAGTTTCCTACCTGGAGTACCTCCAACCTCTTCACAAGCCCAGTACAATATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| CDS-3UTR CCA 90 bp | AAGGGAGGGGGTGCGGGGAGGTGGCATTCCAAATGCTGGCTGAAACATGTTTGCGCACTGTTTCAAATTTaGTGCCAAACATGTTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KGGGAGRWHSKCWLKHVCALFQI*CQTCCP Trigger: AGGGCAACATGTTTGGCACCAAATTTGAAACAGTGC...GCAAACATGTTTCAGCCAGCATTTGGAATGCCACCTCCCCGCACCCCCTCCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| CDS-3UTR CCA 90 bp | CTTAAGCAAGGGAGGGGGTGCGGGGAGGTGGCATTCCAAATGCTGGCTGAAACAGCTCAATGTCAAGGATaGCAATCTTGTCCTGCTTAT | + |
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Preference number: 4 (lower is better) Translates to: LKQGRGCGEVAFQMLAETAQCQG*QSCPAY Trigger: ATAAGCAGGACAAGATTGCCATCCTTGACATTGAGC...TGTTTCAGCCAGCATTTGGAATGCCACCTCCCCGCACCCCCTCCCTTGCTTAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| CDS-3UTR CCA 90 bp | AGTTTTGGTGTTGACTGCAGAGGGAGCAGGGAACTTTGCTTAAATATGTGCCCAGACAGGCACCCACTGTaGAGAACTGCAAGCCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: SFGVDCRGSRELCLNMCPDRHPL*RTASLV Trigger: GACCAGGCTTGCAGTTCTCCACAGTGGGTGCCTGTC...TGGGCACATATTTAAGCAAAGTTCCCTGCTCCCTCTGCAGTCAACACCAAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| CDS-3UTR GCA 90 bp | AAGGGAGGGGGTGCGGGGAGGTGGCATTCCAAATGCTGGCTGAAACATGTTTGCTTTGGTTTCCTTCATTaGCTTCTGCAACTGATCTAC | + |
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Preference number: 4 (lower is better) Translates to: KGGGAGRWHSKCWLKHVCFGFLH*LLQLIY Trigger: GTAGATCAGTTGCAGAAGGCAATGAAGGAAACCAAA...GCAAACATGTTTCAGCCAGCATTTGGAATGCCACCTCCCCGCACCCCCTCCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| CDS-3UTR GCA 90 bp | ATATTGTACTGGGCTTGTGAAGAGGTTGGAGGTACTCCAGGTAGGAAACTGCCAGGGACTGCAACTTGGTaGTTCACTTGGAGCAGAGTG | + |
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Preference number: 4 (lower is better) Translates to: ILYWACEEVGGTPGRKLPGTATW*FTWSRV Trigger: CACTCTGCTCCAAGTGAAGCACCAAGTTGCAGTCCC...TGGCAGTTTCCTACCTGGAGTACCTCCAACCTCTTCACAAGCCCAGTACAATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| CDS-3UTR GCA 90 bp | TTGTGCATTGTGAATACCAGACCTATAGAGGCAGTGACAGGTAATTCCCAGAGAGCCTCAGAGTCCTTCTaGAGCTGCTGCAGGGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: LCIVNTRPIEAVTGNSQRASESF*SCCRAS Trigger: TGAAGCCCTGCAGCAGCTGCAGAAGGACTCTGAGGC...TCTCTGGGAATTACCTGTCACTGCCTCTATAGGTCTGGTATTCACAATGCACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| CDS-3UTR TCA 90 bp | ATTGGCACTGGGGCCTATCTGCTCTCAAGGGAGATCATTACTAATCCAGGGTTACATTCAGCTTCAAAGTaGTCCCCATGGGCTCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: IGTGAYLLSREIITNPGLHSASK*SPWALL Trigger: CAGAAGAGCCCATGGGGATCACTTTGAAGCTGAATG...TAACCCTGGATTAGTAATGATCTCCCTTGAGAGCAGATAGGCCCCAGTGCCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| CDS-3UTR TCA 90 bp | GAAGAGGTTGGAGGTACTCCAGGTAGGAAACTGCCAGTTTTGGTGTTGACTGCAGAACACAATGAAAGGTaGAAGCTCAGCTGTCCGAAC | + |
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Preference number: 4 (lower is better) Translates to: EEVGGTPGRKLPVLVLTAEHNER*KLSCPN Trigger: GTTCGGACAGCTGAGCTTTCACCTTTCATTGTGTTC...TGCAGTCAACACCAAAACTGGCAGTTTCCTACCTGGAGTACCTCCAACCTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| CDS-3UTR CCA 90 bp | CTTAAGCAAGGGAGGGGGTGCGGGGAGGTGGCATTCCAAATGCTGGCTGAAACAGTAGTAACATTTGACTaGTTCAATGAAGTCTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LKQGRGCGEVAFQMLAETVVTFD*FNEVSG Trigger: ACCTGAGACTTCATTGAACCAGTCAAATGTTACTAC...TGTTTCAGCCAGCATTTGGAATGCCACCTCCCCGCACCCCCTCCCTTGCTTAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| CDS-3UTR CCA 90 bp | CTTAAGCAAGGGAGGGGGTGCGGGGAGGTGGCATTCCAAATGCTGGCTGAAACAATGAGATCATTCCTTTaGTTTCCTTCATTGCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LKQGRGCGEVAFQMLAETMRSFL*FPSLPS Trigger: AGAAGGCAATGAAGGAAACCAAAGGAATGATCTCAT...TGTTTCAGCCAGCATTTGGAATGCCACCTCCCCGCACCCCCTCCCTTGCTTAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| CDS-3UTR CCA 90 bp | GAAGAGGTTGGAGGTACTCCAGGTAGGAAACTGCCAGTTTTGGTGTTGACTGCAAGACCATTCTTAATATaGCTACGACCCACCCCACTG | + |
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Preference number: 4 (lower is better) Translates to: EEVGGTPGRKLPVLVLTARPFLI*LRPTPL Trigger: CAGTGGGGTGGGTCGTAGCCATATTAAGAATGGTCT...TGCAGTCAACACCAAAACTGGCAGTTTCCTACCTGGAGTACCTCCAACCTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| CDS-3UTR GCA 90 bp | TCTTACATTGGCACTGGGGCCTATCTGCTCTCAAGGGAGATCATTACTAATCCAGGTCTTCCTCTTGAATaGAGGGAGCCGAACAACTTC | + |
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Preference number: 4 (lower is better) Translates to: SYIGTGAYLLSREIITNPGLPLE*REPNNF Trigger: GAAGTTGTTCGGCTCCCTGCATTCAAGAGGAAGACC...TGGATTAGTAATGATCTCCCTTGAGAGCAGATAGGCCCCAGTGCCAATGTAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| CDS-3UTR GCA 90 bp | TTGTGCATTGTGAATACCAGACCTATAGAGGCAGTGACAGGTAATTCCCAGAGACCCACTGTGGAGAACTaGAAGCCTGGTCAAAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LCIVNTRPIEAVTGNSQRPTVEN*KPGQRL Trigger: AAGCCTTTGACCAGGCTTGCAGTTCTCCACAGTGGG...TCTCTGGGAATTACCTGTCACTGCCTCTATAGGTCTGGTATTCACAATGCACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| CDS-3UTR GCA 90 bp | AGTTTTGGTGTTGACTGCAGAGGGAGCAGGGAACTTTGCTTAAATATGTGCCCATGGTGCCAAACATGTTaGCCTGATAGCTGCCAAACT | + |
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Preference number: 4 (lower is better) Translates to: SFGVDCRGSRELCLNMCPWCQTC*PDSCQT Trigger: AGTTTGGCAGCTATCAGGGCAACATGTTTGGCACCA...TGGGCACATATTTAAGCAAAGTTCCCTGCTCCCTCTGCAGTCAACACCAAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| CDS-3UTR CCA 90 bp | TTTATATTGTACTGGGCTTGTGAAGAGGTTGGAGGTACTCCAGGTAGGAAACTGCATACTGACTACGGATaGCCTCAGAGTCCTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: FILYWACEEVGGTPGRKLHTDYG*PQSPSA Trigger: TGCAGAAGGACTCTGAGGCCATCCGTAGTCAGTATG...CAGTTTCCTACCTGGAGTACCTCCAACCTCTTCACAAGCCCAGTACAATATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| CDS-3UTR CCA 90 bp | GAAGAGGTTGGAGGTACTCCAGGTAGGAAACTGCCAGTTTTGGTGTTGACTGCAGAAACAACATCCAACTaGTCAAAAATGGAACTGTGC | + |
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Preference number: 4 (lower is better) Translates to: EEVGGTPGRKLPVLVLTAETTSN*SKMELC Trigger: GCACAGTTCCATTTTTGACCAGTTGGATGTTGTTTC...TGCAGTCAACACCAAAACTGGCAGTTTCCTACCTGGAGTACCTCCAACCTCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| CDS-3UTR CCA 90 bp | TTGTGCATTGTGAATACCAGACCTATAGAGGCAGTGACAGGTAATTCCCAGAGAGGAGAACTGCAAGCCTaGTCAAAGGCTTCTTGCAAT | + |
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Preference number: 4 (lower is better) Translates to: LCIVNTRPIEAVTGNSQRGELQA*SKASCN Trigger: ATTGCAAGAAGCCTTTGACCAGGCTTGCAGTTCTCC...TCTCTGGGAATTACCTGTCACTGCCTCTATAGGTCTGGTATTCACAATGCACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| 3UTR CAA 72 bp | TCCAGGGTTAAGAGGAAAGGGGTAGATGCATTTATATaGTACTGGGCTTGTGAAGAGGTTGGAGGTACTCCA | + |
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Preference number: 4 (lower is better) Translates to: SRVKRKGVDAFI*YWACEEVGGTP Trigger: TGGAGTACCTCCAACCTCTTCACAAGCCCAGTACAATATAAATGCATCTACCCCTTTCCTCTTAACCCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| CDS-3UTR TCA 90 bp | TCTTACATTGGCACTGGGGCCTATCTGCTCTCAAGGGAGATCATTACTAATCCATCTCCTCTGTTGAGATaGAATGATACTCCTTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: SYIGTGAYLLSREIITNPSPLLR*NDTPSH Trigger: ATGGGAAGGAGTATCATTTCATCTCAACAGAGGAGA...TGGATTAGTAATGATCTCCCTTGAGAGCAGATAGGCCCCAGTGCCAATGTAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| CDS-3UTR TCA 90 bp | AGTTTTGGTGTTGACTGCAGAGGGAGCAGGGAACTTTGCTTAAATATGTGCCCACGTCATCTCCTCTGTTaGGATGAAATGATACTCCTT | + |
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Preference number: 4 (lower is better) Translates to: SFGVDCRGSRELCLNMCPRHLLC*DEMILL Trigger: AAGGAGTATCATTTCATCTCAACAGAGGAGATGACG...TGGGCACATATTTAAGCAAAGTTCCCTGCTCCCTCTGCAGTCAACACCAAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| CDS-3UTR GCA 90 bp | ATTGGCACTGGGGCCTATCTGCTCTCAAGGGAGATCATTACTAATCCAGGGTTACTGTTTCAAATTTGGTaGCAAACATGTTGCCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: IGTGAYLLSREIITNPGLLFQIW*QTCCPD Trigger: ATCAGGGCAACATGTTTGGCACCAAATTTGAAACAG...TAACCCTGGATTAGTAATGATCTCCCTTGAGAGCAGATAGGCCCCAGTGCCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| CDS-3UTR CCA 90 bp | AGGGTTAAGAGGAAAGGGGTAGATGCATTTATATTGTACTGGGCTTGTGAAGAGACAGTCTTTAGGGTCTaGGGCTCAATGTCAAGGATG | + |
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Preference number: 4 (lower is better) Translates to: RVKRKGVDAFILYWACEETVFRV*GSMSRM Trigger: CATCCTTGACATTGAGCCCCAGACCCTAAAGACTGT...CTCTTCACAAGCCCAGTACAATATAAATGCATCTACCCCTTTCCTCTTAACCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
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| CDS-3UTR TCA 90 bp | AGTTTTGGTGTTGACTGCAGAGGGAGCAGGGAACTTTGCTTAAATATGTGCCCACTGCAACTGATCTACTaGGTGATTAGTCACATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SFGVDCRGSRELCLNMCPLQLIY*VISHIC Trigger: ACAAATGTGACTAATCACTCAGTAGATCAGTTGCAG...TGGGCACATATTTAAGCAAAGTTCCCTGCTCCCTCTGCAGTCAACACCAAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
||
| CDS-3UTR GCA 90 bp | AGTTTTGGTGTTGACTGCAGAGGGAGCAGGGAACTTTGCTTAAATATGTGCCCATCAAAAATGGAACTGTaGTTAGCCAGGTACTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFGVDCRGSRELCLNMCPSKMEL*LARYLS Trigger: AGACAAGTACCTGGCTAAGCACAGTTCCATTTTTGA...TGGGCACATATTTAAGCAAAGTTCCCTGCTCCCTCTGCAGTCAACACCAAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
||
| CDS-3UTR CCA 90 bp | TTTATATTGTACTGGGCTTGTGAAGAGGTTGGAGGTACTCCAGGTAGGAAACTGACTCCAAGAACTCATTaGCAGAGATGTTCTTCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FILYWACEEVGGTPGRKLTPRTH*QRCSSS Trigger: TGACGAAGAACATCTCTGCCAATGAGTTCTTGGAGT...CAGTTTCCTACCTGGAGTACCTCCAACCTCTTCACAAGCCCAGTACAATATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
||
| CDS-3UTR TCA 90 bp | AGGGTTAAGAGGAAAGGGGTAGATGCATTTATATTGTACTGGGCTTGTGAAGAGATCTTGTCCTGCTTATaGATCTGGTGCACTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RVKRKGVDAFILYWACEEILSCL*IWCTVS Trigger: TGAAACAGTGCACCAGATTCATAAGCAGGACAAGAT...CTCTTCACAAGCCCAGTACAATATAAATGCATCTACCCCTTTCCTCTTAACCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
||
| 3UTR CAA 72 bp | AGGCTTCAGGGGGACAGTTGGTTTATCTATGTAGCATaGCATTTGGTTATTCTTATGGCAATTTTCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLQGDSWFIYVA*HLVILMAIFQR Trigger: TCTCTGGAAAATTGCCATAAGAATAACCAAATGCAATGCTACATAGATAAACCAACTGTCCCCCTGAAGCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
||
| 3UTR CAA 72 bp | GATCTTATGTTAATGTCATTGCTTGGAAGGTTAAGATaGGGAATGGAGTTACAGGGTCACGGGTACTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: DLMLMSLLGRLR*GMELQGHGYFN Trigger: GTTAAAGTACCCGTGACCCTGTAACTCCATTCCCAATCTTAACCTTCCAAGCAATGACATTAACATAAGATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
||
| 3UTR CAA 72 bp | CAGGGGGACAGTTGGTTTATCTATGTAGCATTGCATTaGGTTATTCTTATGGCAATTTTCCAGAGATCATTT | + |
|
Preference number: 4 (lower is better) Translates to: QGDSWFIYVALH*VILMAIFQRSF Trigger: AAATGATCTCTGGAAAATTGCCATAAGAATAACCAAATGCAATGCTACATAGATAAACCAACTGTCCCCCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
||
| CDS-3UTR CAA 90 bp | CTTAAGCAAGGGAGGGGGTGCGGGGAGGTGGCATTCCAAATGCTGGCTGAAACAAATCCTGCAGACTCTTaGGAGGAGCCCTCCACCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LKQGRGCGEVAFQMLAETNPADS*EEPSTR Trigger: GCGGGTGGAGGGCTCCTCCAAAGAGTCTGCAGGATT...TGTTTCAGCCAGCATTTGGAATGCCACCTCCCCGCACCCCCTCCCTTGCTTAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
||
| CDS-3UTR CAA 90 bp | AAGGGAGGGGGTGCGGGGAGGTGGCATTCCAAATGCTGGCTGAAACATGTTTGCCAGAGTGAGCCACGCTaGCCACTCTCCATTCCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: KGGGAGRWHSKCWLKHVCQSEPR*PLSIPV Trigger: TACAGGAATGGAGAGTGGCAAGCGTGGCTCACTCTG...GCAAACATGTTTCAGCCAGCATTTGGAATGCCACCTCCCCGCACCCCCTCCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
||
| CDS CCA 90 bp | ACGAACTCTCCGAGCCTCCTGACCTTTGGCATGGGCAGGGCTACCTaGAGCAGGGGACCCATTGGTGTACATGTCCTCAGTAGTAACATT | + |
|
Preference number: 5 (lower is better) Translates to: TNSPSLLTFGMGRAT*SRGPIGVHVLSSNI Trigger: AATGTTACTACTGAGGACATGTACACCAATGGGTCCCCTGCTCCAGGTAGCCCTGCCCATGCCAAAGGTCAGGAGGCTCGGAGAGTTCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGAGGGGGTGCGGGGAGGTGGCATTCCAAATGCTGGCTGAAACATGTTTGCCAAAGGGACTGCAACTaGGTGCTTCACTTGGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KGGGAGRWHSKCWLKHVCQRDCN*VLHLEQ Trigger: CTGCTCCAAGTGAAGCACCAAGTTGCAGTCCCTTTG...GCAAACATGTTTCAGCCAGCATTTGGAATGCCACCTCCCCGCACCCCCTCCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
||
| CDS TCA 90 bp | TCTGTGATCTTCTCAAATTGTATGAGACGAACTCTCCGAGCCTCCTaGCCTTTGGCATGGGCAGGGCTACCTGGAGCAGGGGACCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: SVIFSNCMRRTLRAS*PLAWAGLPGAGDPL Trigger: CAATGGGTCCCCTGCTCCAGGTAGCCCTGCCCATGCCAAAGGTCAGGAGGCTCGGAGAGTTCGTCTCATACAATTTGAGAAGATCACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 |
||
| CDS TCA 90 bp | TTCTTCCCAAAGGGACTGCAACTTGGTGCTTCACTTGGAGCAGAGTaGGCCACGCTTGCCACTCTCCATTCCTGTAGCTCAGGAGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FFPKGLQLGASLGAE*ATLATLHSCSSGEG Trigger: CCCTTCTCCTGAGCTACAGGAATGGAGAGTGGCAAGCGTGGCTCACTCTGCTCCAAGTGAAGCACCAAGTTGCAGTCCCTTTGGGAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 ENSMUST00000132501.8 ENSMUST00000153318.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGAGGGGGTGCGGGGAGGTGGCATTCCAAATGCTGGCTGAAACATGTTTGCTTCAGTCCTGCCTCCTaGCAAGGAATAAGGTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KGGGAGRWHSKCWLKHVCFSPAS*QGIRLS Trigger: GGACAACCTTATTCCTTGCAAGGAGGCAGGACTGAA...GCAAACATGTTTCAGCCAGCATTTGGAATGCCACCTCCCCGCACCCCCTCCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
||
| CDS TCA 90 bp | GACCTAAAAGGTGTGGACCTCCACCCATGTGACCCCTTTCCCACCTaGGTGCCCTGGTCAGTAGGTGCGATGAACACAATGAAAGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: DLKGVDLHPCDPFPT*VPWSVGAMNTMKGE Trigger: TTCACCTTTCATTGTGTTCATCGCACCTACTGACCAGGGCACTCAGGTGGGAAAGGGGTCACATGGGTGGAGGTCCACACCTTTTAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114091.8 |
||
| CDS TCA 90 bp | TACGACCCACCCCACTGGCTCCGATCAACACCAAGGTCTTCCTCTTaGATGCAGGGAGCCGAACAACTTCCTCATAGGAAACAACATCCA | + |
|
Preference number: 5 (lower is better) Translates to: YDPPHWLRSTPRSSS*MQGAEQLPHRKQHP Trigger: TGGATGTTGTTTCCTATGAGGAAGTTGTTCGGCTCCCTGCATTCAAGAGGAAGACCTTGGTGTTGATCGGAGCCAGTGGGGTGGGTCGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 ENSMUST00000132501.8 |
||
| CDS TCA 90 bp | GGCCGTGTTGTATATGGGGCAGGGTACGCAAACTTCTCTGGATTGTaGCTGAGCAGACCATTCTTAATATGGCTACGACCCACCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GRVVYGAGYANFSGL*LSRPFLIWLRPTPL Trigger: CAGTGGGGTGGGTCGTAGCCATATTAAGAATGGTCTGCTCAGTCACAATCCAGAGAAGTTTGCGTACCCTGCCCCATATACAACACGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 ENSMUST00000132501.8 |
||
| CDS GCA 90 bp | ACCCACCCCACTGGCTCCGATCAACACCAAGGTCTTCCTCTTGAATaGAGGGAGCCGAACAACTTCCTCATAGGAAACAACATCCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: THPTGSDQHQGLPLE*REPNNFLIGNNIQL Trigger: CAGTTGGATGTTGTTTCCTATGAGGAAGTTGTTCGGCTCCCTGCATTCAAGAGGAAGACCTTGGTGTTGATCGGAGCCAGTGGGGTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 ENSMUST00000132501.8 |
||
| CDS-3UTR CAA 90 bp | CTTAAGCAAGGGAGGGGGTGCGGGGAGGTGGCATTCCAAATGCTGGCTGAAACAAACTCCAAGAACTCATaGGCAGAGATGTTCTTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: LKQGRGCGEVAFQMLAETNSKNS*AEMFFV Trigger: GACGAAGAACATCTCTGCCAATGAGTTCTTGGAGTT...TGTTTCAGCCAGCATTTGGAATGCCACCTCCCCGCACCCCCTCCCTTGCTTAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
||
| CDS-3UTR CAA 90 bp | CTTAAGCAAGGGAGGGGGTGCGGGGAGGTGGCATTCCAAATGCTGGCTGAAACACTTTGGTTTCCTTCATaGCCTTCTGCAACTGATCTA | + |
|
Preference number: 5 (lower is better) Translates to: LKQGRGCGEVAFQMLAETLWFPS*PSATDL Trigger: TAGATCAGTTGCAGAAGGCAATGAAGGAAACCAAAG...TGTTTCAGCCAGCATTTGGAATGCCACCTCCCCGCACCCCCTCCCTTGCTTAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
||
| CDS-3UTR CAA 90 bp | ATTGGCACTGGGGCCTATCTGCTCTCAAGGGAGATCATTACTAATCCAGGGTTAAACTTGGTGCTTCACTaGGAGCAGAGTGAGCCACGC | + |
|
Preference number: 5 (lower is better) Translates to: IGTGAYLLSREIITNPGLNLVLH*EQSEPR Trigger: GCGTGGCTCACTCTGCTCCAAGTGAAGCACCAAGTT...TAACCCTGGATTAGTAATGATCTCCCTTGAGAGCAGATAGGCCCCAGTGCCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
||
| CDS GCA 90 bp | GGGATTAATCCTGCAGACTCTTTGGAGGAGCCCTCCACCCGCCCCTaGCACCAATTGCTGTCATCTTTGTTGATTATCTGGATAATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GINPADSLEEPSTRP*HQLLSSLLIIWIMS Trigger: AGACATTATCCAGATAATCAACAAAGATGACAGCAATTGGTGGCAGGGGCGGGTGGAGGGCTCCTCCAAAGAGTCTGCAGGATTAATCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 ENSMUST00000132501.8 ENSMUST00000153318.8 |
||
| CDS GCA 90 bp | CTTGTCTTTACACTTCTTCTTCTTCCCAAAGGGACTGCAACTTGGTaGTTCACTTGGAGCAGAGTGAGCCACGCTTGCCACTCTCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: LVFTLLLLPKGTATW*FTWSRVSHACHSPF Trigger: GAATGGAGAGTGGCAAGCGTGGCTCACTCTGCTCCAAGTGAAGCACCAAGTTGCAGTCCCTTTGGGAAGAAGAAGAAGTGTAAAGACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 ENSMUST00000132501.8 ENSMUST00000153318.8 |
||
| CDS-3UTR CAA 90 bp | AGTTTTGGTGTTGACTGCAGAGGGAGCAGGGAACTTTGCTTAAATATGTGCCCAGGAGCAGGGGACCCATaGGTGTACATGTCCTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SFGVDCRGSRELCLNMCPGAGDP*VYMSSV Trigger: TACTGAGGACATGTACACCAATGGGTCCCCTGCTCC...TGGGCACATATTTAAGCAAAGTTCCCTGCTCCCTCTGCAGTCAACACCAAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
||
| CDS-3UTR CAA 90 bp | TTTATATTGTACTGGGCTTGTGAAGAGGTTGGAGGTACTCCAGGTAGGAAACTGTCTTTGGTGGCCGTGTaGTATATGGGGCAGGGTACG | + |
|
Preference number: 5 (lower is better) Translates to: FILYWACEEVGGTPGRKLSLVAV*YMGQGT Trigger: CGTACCCTGCCCCATATACAACACGGCCACCAAAGA...CAGTTTCCTACCTGGAGTACCTCCAACCTCTTCACAAGCCCAGTACAATATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
||
| CDS TCA 90 bp | AGGGTCTGGGGCTCAATGTCAAGGATGGCAATCTTGTCCTGCTTATaGATCTGGTGCACTGTTTCAAATTTGGTGCCAAACATGTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RVWGSMSRMAILSCL*IWCTVSNLVPNMLP Trigger: GGGCAACATGTTTGGCACCAAATTTGAAACAGTGCACCAGATTCATAAGCAGGACAAGATTGCCATCCTTGACATTGAGCCCCAGACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 |
||
| CDS CCA 90 bp | GCAGGGGACCCATTGGTGTACATGTCCTCAGTAGTAACATTTGACTaGTTCAATGAAGTCTCAGGTCGGTTACGCTTCTGTAGTAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: AGDPLVYMSSVVTFD*FNEVSGRLRFCSKC Trigger: GCACTTACTACAGAAGCGTAACCGACCTGAGACTTCATTGAACCAGTCAAATGTTACTACTGAGGACATGTACACCAATGGGTCCCCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 ENSMUST00000155742.2 |
||
| CDS CCA 90 bp | CAGCTGTCCGAACAGTCTTTAGGGTCTGGGGCTCAATGTCAAGGATaGCAATCTTGTCCTGCTTATGAATCTGGTGCACTGTTTCAAATT | + |
|
Preference number: 5 (lower is better) Translates to: QLSEQSLGSGAQCQG*QSCPAYESGALFQI Trigger: AATTTGAAACAGTGCACCAGATTCATAAGCAGGACAAGATTGCCATCCTTGACATTGAGCCCCAGACCCTAAAGACTGTTCGGACAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 |
||
| CDS-3UTR CAA 90 bp | TTTATATTGTACTGGGCTTGTGAAGAGGTTGGAGGTACTCCAGGTAGGAAACTGCGCCCCTGCCACCAATaGCTGTCATCTTTGTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: FILYWACEEVGGTPGRKLRPCHQ*LSSLLI Trigger: AATCAACAAAGATGACAGCAATTGGTGGCAGGGGCG...CAGTTTCCTACCTGGAGTACCTCCAACCTCTTCACAAGCCCAGTACAATATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
||
| CDS-3UTR CAA 90 bp | AGGGTTAAGAGGAAAGGGGTAGATGCATTTATATTGTACTGGGCTTGTGAAGAGACCAAGGTCTTCCTCTaGAATGCAGGGAGCCGAACA | + |
|
Preference number: 5 (lower is better) Translates to: RVKRKGVDAFILYWACEETKVFL*NAGSRT Trigger: TGTTCGGCTCCCTGCATTCAAGAGGAAGACCTTGGT...CTCTTCACAAGCCCAGTACAATATAAATGCATCTACCCCTTTCCTCTTAACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
||
| CDS TCA 90 bp | ACAAACTTCAGTCCTGCCTCCTGTAGCGCAGGAAGGCGACTCTGCTaGTTAGCAATGACTTTTAATGAGATCATTCCTTTGGTTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TNFSPASCSAGRRLC*LAMTFNEIIPLVSF Trigger: GAAGGAAACCAAAGGAATGATCTCATTAAAAGTCATTGCTAATCAGCAGAGTCGCCTTCCTGCGCTACAGGAGGCAGGACTGAAGTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114092.8 |
||
| CDS GCA 90 bp | GGTGCACTGTTTCAAATTTGGTGCCAAACATGTTGCCCTGATAGCTaGCAAACTCCAAGAACTCATTGGCAGAGATGTTCTTCGTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: GALFQIWCQTCCPDS*QTPRTHWQRCSSSS Trigger: AGATGACGAAGAACATCTCTGCCAATGAGTTCTTGGAGTTTGGCAGCTATCAGGGCAACATGTTTGGCACCAAATTTGAAACAGTGCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 |
||
| CDS-3UTR CAA 90 bp | ATATTGTACTGGGCTTGTGAAGAGGTTGGAGGTACTCCAGGTAGGAAACTGCCATGTGATCTTCTCAAATaGTATGAGACGAACTCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: ILYWACEEVGGTPGRKLPCDLLK*YETNSP Trigger: CGGAGAGTTCGTCTCATACAATTTGAGAAGATCACA...TGGCAGTTTCCTACCTGGAGTACCTCCAACCTCTTCACAAGCCCAGTACAATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
||
| CDS-3UTR CAA 90 bp | GAAGAGGTTGGAGGTACTCCAGGTAGGAAACTGCCAGTTTTGGTGTTGACTGCACTGGTCAAAGGCTTCTaGCAATTTCTTAAGAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: EEVGGTPGRKLPVLVLTALVKGF*QFLKSF Trigger: GAAACTCTTAAGAAATTGCAAGAAGCCTTTGACCAG...TGCAGTCAACACCAAAACTGGCAGTTTCCTACCTGGAGTACCTCCAACCTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
||
| CDS GCA 90 bp | GCTTATGAATCTGGTGCACTGTTTCAAATTTGGTGCCAAACATGTTaGCCTGATAGCTGCCAAACTCCAAGAACTCATTGGCAGAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: AYESGALFQIWCQTC*PDSCQTPRTHWQRC Trigger: ACATCTCTGCCAATGAGTTCTTGGAGTTTGGCAGCTATCAGGGCAACATGTTTGGCACCAAATTTGAAACAGTGCACCAGATTCATAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 |
||
| CDS-3UTR CAA 90 bp | TCTTACATTGGCACTGGGGCCTATCTGCTCTCAAGGGAGATCATTACTAATCCATGCTTAGCCAGGTACTaGTCTTTACACTTCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SYIGTGAYLLSREIITNPCLARY*SLHFFF Trigger: GAAGAAGAAGTGTAAAGACAAGTACCTGGCTAAGCA...TGGATTAGTAATGATCTCCCTTGAGAGCAGATAGGCCCCAGTGCCAATGTAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
||
| CDS-3UTR CAA 90 bp | AGGGTTAAGAGGAAAGGGGTAGATGCATTTATATTGTACTGGGCTTGTGAAGAGCTTCCTCACTCTTCTTaGGTGGCCGTGTTGTATATG | + |
|
Preference number: 5 (lower is better) Translates to: RVKRKGVDAFILYWACEELPHSS*VAVLYM Trigger: CATATACAACACGGCCACCAAAGAAGAGTGAGGAAG...CTCTTCACAAGCCCAGTACAATATAAATGCATCTACCCCTTTCCTCTTAACCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
||
| CDS-3UTR CAA 90 bp | TTTATATTGTACTGGGCTTGTGAAGAGGTTGGAGGTACTCCAGGTAGGAAACTGTGCACTGTTTCAAATTaGGTGCCAAACATGTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: FILYWACEEVGGTPGRKLCTVSN*VPNMLP Trigger: GGGCAACATGTTTGGCACCAAATTTGAAACAGTGCA...CAGTTTCCTACCTGGAGTACCTCCAACCTCTTCACAAGCCCAGTACAATATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
||
| CDS TCA 90 bp | AACTGTGCTCTCATGAACATCTGTAGCGCAGGAAGGCGACTCTGCTaGTTAGCAATGACTTTTAATGAGATCATTCCTTTGGTTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NCALMNICSAGRRLC*LAMTFNEIIPLVSF Trigger: GAAGGAAACCAAAGGAATGATCTCATTAAAAGTCATTGCTAATCAGCAGAGTCGCCTTCCTGCGCTACAGATGTTCATGAGAGCACAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000153318.8 |
||
| CDS-3UTR CAA 90 bp | TTTATATTGTACTGGGCTTGTGAAGAGGTTGGAGGTACTCCAGGTAGGAAACTGAATAAGGTTGTCCTTTaGGGGATCATAGTCAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: FILYWACEEVGGTPGRKLNKVVL*GIIVKL Trigger: CAGTTTGACTATGATCCCCAAAAGGACAACCTTATT...CAGTTTCCTACCTGGAGTACCTCCAACCTCTTCACAAGCCCAGTACAATATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033775.9 |
||
| CDS GCA 90 bp | TTTGTTGATTATCTGGATAATGTCTCCAGTAACAAACTTCAGTCCTaGCTCCTTGCAAGGAATAAGGTTGTCCTTTTGGGGATCATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: FVDYLDNVSSNKLQS*LLARNKVVLLGIIV Trigger: GACTATGATCCCCAAAAGGACAACCTTATTCCTTGCAAGGAGGCAGGACTGAAGTTTGTTACTGGAGACATTATCCAGATAATCAACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000132501.8 ENSMUST00000153318.8 |
||
| CDS CCA 72 bp | CCGAGCCTCCTGACCTTTGGCATGGGCAGGGCTACCTaGAGCAGGGGACCCATTGGTGTACATGTCCTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: PSLLTFGMGRAT*SRGPIGVHVLS Trigger: ACTGAGGACATGTACACCAATGGGTCCCCTGCTCCAGGTAGCCCTGCCCATGCCAAAGGTCAGGAGGCTCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 |
||
| CDS GCA 72 bp | GTAGTAAGTGCTCCAGGTAGAGGTCCGAAAGTGCGGTaGGCATGCTGTTCCCTCCCTCGCCTTCGCTCGACT | + |
|
Preference number: 6 (lower is better) Translates to: VVSAPGRGPKVR*ACCSLPRLRST Trigger: AGTCGAGCGAAGGCGAGGGAGGGAACAGCATGCGCACCGCACTTTCGGACCTCTACCTGGAGCACTTACTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 ENSMUST00000127023.2 ENSMUST00000132501.8 ENSMUST00000153318.8 ENSMUST00000155742.2 |
||
| CDS CCA 72 bp | GATCCCCTCCTGACCTTTGGCATGGGCAGGGCTACCTaGAGCAGGGGACCCATTGGTGTACATGTCCTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: DPLLTFGMGRAT*SRGPIGVHVLS Trigger: ACTGAGGACATGTACACCAATGGGTCCCCTGCTCCAGGTAGCCCTGCCCATGCCAAAGGTCAGGAGGGGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155742.2 |
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| CDS TCA 72 bp | GGTGTGGACCTCCACCCATGTGACCCCTTTCCCACCTaGGTGCCCTGGTCAGTAGGTGCGATGAACACAATG | + |
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Preference number: 6 (lower is better) Translates to: GVDLHPCDPFPT*VPWSVGAMNTM Trigger: CATTGTGTTCATCGCACCTACTGACCAGGGCACTCAGGTGGGAAAGGGGTCACATGGGTGGAGGTCCACACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114091.8 |
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| CDS CCA 72 bp | GTAGCTCAGGAGAAGGGATTAATCCTGCAGACTCTTTaGAGGAGCCCTCCACCCGCCCCTGCCACCAATTGC | + |
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Preference number: 6 (lower is better) Translates to: VAQEKGLILQTL*RSPPPAPATNC Trigger: GCAATTGGTGGCAGGGGCGGGTGGAGGGCTCCTCCAAAGAGTCTGCAGGATTAATCCCTTCTCCTGAGCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 ENSMUST00000132501.8 ENSMUST00000153318.8 |
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| CDS TCA 72 bp | TTCTCAAATTGTATGAGACGAACTCTCCGAGCCTCCTaGCCTTTGGCATGGGCAGGGCTACCTGGAGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: FSNCMRRTLRAS*PLAWAGLPGAG Trigger: CCCTGCTCCAGGTAGCCCTGCCCATGCCAAAGGTCAGGAGGCTCGGAGAGTTCGTCTCATACAATTTGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 |
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| CDS GCA 72 bp | CCTGCAGACTCTTTGGAGGAGCCCTCCACCCGCCCCTaGCACCAATTGCTGTCATCTTTGTTGATTATCTGG | + |
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Preference number: 6 (lower is better) Translates to: PADSLEEPSTRP*HQLLSSLLIIW Trigger: CCAGATAATCAACAAAGATGACAGCAATTGGTGGCAGGGGCGGGTGGAGGGCTCCTCCAAAGAGTCTGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 ENSMUST00000132501.8 ENSMUST00000153318.8 |
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| CDS TCA 72 bp | AAGGGACTGCAACTTGGTGCTTCACTTGGAGCAGAGTaGGCCACGCTTGCCACTCTCCATTCCTGTAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: KGLQLGASLGAE*ATLATLHSCSS Trigger: TGAGCTACAGGAATGGAGAGTGGCAAGCGTGGCTCACTCTGCTCCAAGTGAAGCACCAAGTTGCAGTCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 ENSMUST00000132501.8 ENSMUST00000153318.8 |
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| CDS CCA 72 bp | CTTCTTCCCAAAGGGACTGCAACTTGGTGCTTCACTTaGAGCAGAGTGAGCCACGCTTGCCACTCTCCATTC | + |
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Preference number: 6 (lower is better) Translates to: LLPKGTATWCFT*SRVSHACHSPF Trigger: GAATGGAGAGTGGCAAGCGTGGCTCACTCTGCTCCAAGTGAAGCACCAAGTTGCAGTCCCTTTGGGAAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 ENSMUST00000132501.8 ENSMUST00000153318.8 |
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| CDS CAA 72 bp | TTGGCATGGGCAGGGCTACCTGGAGCAGGGGACCCATaGGTGTACATGTCCTCAGTAGTAACATTTGACTGG | + |
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Preference number: 6 (lower is better) Translates to: LAWAGLPGAGDP*VYMSSVVTFDW Trigger: CCAGTCAAATGTTACTACTGAGGACATGTACACCAATGGGTCCCCTGCTCCAGGTAGCCCTGCCCATGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 ENSMUST00000155742.2 |
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| CDS CAA 90 bp | AGGGACTGCAACTTGGTGCTTCACTTGGAGCAGAGTGAGCCACGCTaGCCACTCTCCATTCCTGTAGCTCAGGAGAAGGGATTAATCCTG | + |
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Preference number: 6 (lower is better) Translates to: RDCNLVLHLEQSEPR*PLSIPVAQEKGLIL Trigger: CAGGATTAATCCCTTCTCCTGAGCTACAGGAATGGAGAGTGGCAAGCGTGGCTCACTCTGCTCCAAGTGAAGCACCAAGTTGCAGTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 ENSMUST00000132501.8 ENSMUST00000153318.8 |
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| CDS GCA 72 bp | CATCCCCAACATGAAGGGAGCCTTGTCTATGAATCATaGCGCCATGGAGAATTCTGGCCACGGTACACGACT | + |
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Preference number: 6 (lower is better) Translates to: HPQHEGSLVYES*RHGEFWPRYTT Trigger: AGTCGTGTACCGTGGCCAGAATTCTCCATGGCGGCATGATTCATAGACAAGGCTCCCTTCATGTTGGGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 ENSMUST00000155742.2 |
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| CDS CAA 72 bp | TCTTCTTCCCAAAGGGACTGCAACTTGGTGCTTCACTaGGAGCAGAGTGAGCCACGCTTGCCACTCTCCATT | + |
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Preference number: 6 (lower is better) Translates to: SSSQRDCNLVLH*EQSEPRLPLSI Trigger: AATGGAGAGTGGCAAGCGTGGCTCACTCTGCTCCAAGTGAAGCACCAAGTTGCAGTCCCTTTGGGAAGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 ENSMUST00000132501.8 ENSMUST00000153318.8 |
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| CDS CAA 90 bp | CAGCTTCAAAGTGATCCCCATGGGCTCTTCTGTGATCTTCTCAAATaGTATGAGACGAACTCTCCGAGCCTCCTGACCTTTGGCATGGGC | + |
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Preference number: 6 (lower is better) Translates to: QLQSDPHGLFCDLLK*YETNSPSLLTFGMG Trigger: GCCCATGCCAAAGGTCAGGAGGCTCGGAGAGTTCGTCTCATACAATTTGAGAAGATCACAGAAGAGCCCATGGGGATCACTTTGAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 |
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| CDS CAA 90 bp | TACACTTCTTCTTCTTCCCAAAGGGACTGCAACTTGGTGCTTCACTaGGAGCAGAGTGAGCCACGCTTGCCACTCTCCATTCCTGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: YTSSSSQRDCNLVLH*EQSEPRLPLSIPVA Trigger: AGCTACAGGAATGGAGAGTGGCAAGCGTGGCTCACTCTGCTCCAAGTGAAGCACCAAGTTGCAGTCCCTTTGGGAAGAAGAAGAAGTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 ENSMUST00000132501.8 ENSMUST00000153318.8 |
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| CDS CAA 90 bp | GGTACTTGTCTTTACACTTCTTCTTCTTCCCAAAGGGACTGCAACTaGGTGCTTCACTTGGAGCAGAGTGAGCCACGCTTGCCACTCTCC | + |
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Preference number: 6 (lower is better) Translates to: GTCLYTSSSSQRDCN*VLHLEQSEPRLPLS Trigger: GGAGAGTGGCAAGCGTGGCTCACTCTGCTCCAAGTGAAGCACCAAGTTGCAGTCCCTTTGGGAAGAAGAAGAAGTGTAAAGACAAGTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 ENSMUST00000132501.8 ENSMUST00000153318.8 |
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| CDS CAA 72 bp | CCTTCCCATCTTCCTCACTCTTCTTTGGTGGCCGTGTaGTATATGGGGCAGGGTACGCAAACTTCTCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: PSHLPHSSLVAV*YMGQGTQTSLD Trigger: ATCCAGAGAAGTTTGCGTACCCTGCCCCATATACAACACGGCCACCAAAGAAGAGTGAGGAAGATGGGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 ENSMUST00000132501.8 |
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| CDS GCA 72 bp | ACTGGCTCCGATCAACACCAAGGTCTTCCTCTTGAATaGAGGGAGCCGAACAACTTCCTCATAGGAAACAAC | + |
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Preference number: 6 (lower is better) Translates to: TGSDQHQGLPLE*REPNNFLIGNN Trigger: GTTGTTTCCTATGAGGAAGTTGTTCGGCTCCCTGCATTCAAGAGGAAGACCTTGGTGTTGATCGGAGCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 ENSMUST00000132501.8 |
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| CDS CAA 72 bp | TCTTTGGAGGAGCCCTCCACCCGCCCCTGCCACCAATaGCTGTCATCTTTGTTGATTATCTGGATAATGTCT | + |
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Preference number: 6 (lower is better) Translates to: SLEEPSTRPCHQ*LSSLLIIWIMS Trigger: AGACATTATCCAGATAATCAACAAAGATGACAGCAATTGGTGGCAGGGGCGGGTGGAGGGCTCCTCCAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 ENSMUST00000132501.8 ENSMUST00000153318.8 |
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| CDS TCA 72 bp | TGTCCTTTTGGGGATCATAGTCAAACTGTGCTCTCATaGACATCTGTAGCGCAGGAAGGCGACTCTGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: CPFGDHSQTVLS*TSVAQEGDSAD Trigger: ATCAGCAGAGTCGCCTTCCTGCGCTACAGATGTTCATGAGAGCACAGTTTGACTATGATCCCCAAAAGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000153318.8 |
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| CDS CCA 72 bp | ATCTTCCTCACTCTTCTTTGGTGGCCGTGTTGTATATaGGGCAGGGTACGCAAACTTCTCTGGATTGTGACT | + |
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Preference number: 6 (lower is better) Translates to: IFLTLLWWPCCI*GRVRKLLWIVT Trigger: AGTCACAATCCAGAGAAGTTTGCGTACCCTGCCCCATATACAACACGGCCACCAAAGAAGAGTGAGGAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 ENSMUST00000132501.8 |
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| CDS CCA 72 bp | CAGGAGACAGGCACCCACTGTGGAGAACTGCAAGCCTaGTCAAAGGCTTCTTGCAATTTCTTAAGAGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: QETGTHCGELQA*SKASCNFLRVS Trigger: TGAAACTCTTAAGAAATTGCAAGAAGCCTTTGACCAGGCTTGCAGTTCTCCACAGTGGGTGCCTGTCTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033775.9 ENSMUST00000114092.8 |
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| CDS TCA 72 bp | AGTCCTGCCTCCTGTAGCGCAGGAAGGCGACTCTGCTaGTTAGCAATGACTTTTAATGAGATCATTCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: SPASCSAGRRLC*LAMTFNEIIPL Trigger: CAAAGGAATGATCTCATTAAAAGTCATTGCTAATCAGCAGAGTCGCCTTCCTGCGCTACAGGAGGCAGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114092.8 |
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| CDS CCA 72 bp | CCGTGTTGTATATGGGGCAGGGTACGCAAACTTCTCTaGATTGTGACTGAGCAGACCATTCTTAATATGGCT | + |
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Preference number: 6 (lower is better) Translates to: PCCIWGRVRKLL*IVTEQTILNMA Trigger: AGCCATATTAAGAATGGTCTGCTCAGTCACAATCCAGAGAAGTTTGCGTACCCTGCCCCATATACAACACGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 ENSMUST00000132501.8 |
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| CDS CCA 72 bp | TGTTGCCCTGATAGCTGCCAAACTCCAAGAACTCATTaGCAGAGATGTTCTTCGTCATCTCCTCTGTTGAGA | + |
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Preference number: 6 (lower is better) Translates to: CCPDSCQTPRTH*QRCSSSSPLLR Trigger: TCTCAACAGAGGAGATGACGAAGAACATCTCTGCCAATGAGTTCTTGGAGTTTGGCAGCTATCAGGGCAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 |
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| CDS GCA 72 bp | TCTGGTGCACTGTTTCAAATTTGGTGCCAAACATGTTaGCCTGATAGCTGCCAAACTCCAAGAACTCATTGG | + |
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Preference number: 6 (lower is better) Translates to: SGALFQIWCQTC*PDSCQTPRTHW Trigger: CCAATGAGTTCTTGGAGTTTGGCAGCTATCAGGGCAACATGTTTGGCACCAAATTTGAAACAGTGCACCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 |
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| CDS TCA 72 bp | TGGCAGAGATGTTCTTCGTCATCTCCTCTGTTGAGATaGAATGATACTCCTTCCCATCTTCCTCACTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: WQRCSSSSPLLR*NDTPSHLPHSS Trigger: AGAAGAGTGAGGAAGATGGGAAGGAGTATCATTTCATCTCAACAGAGGAGATGACGAAGAACATCTCTGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 |
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| CDS TCA 72 bp | GGCTCAATGTCAAGGATGGCAATCTTGTCCTGCTTATaGATCTGGTGCACTGTTTCAAATTTGGTGCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: GSMSRMAILSCL*IWCTVSNLVPN Trigger: GTTTGGCACCAAATTTGAAACAGTGCACCAGATTCATAAGCAGGACAAGATTGCCATCCTTGACATTGAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 |
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| CDS TCA 72 bp | TGTCCTTTTGGGGATCATAGTCAAACTGTGCTCTCATaGACATCTCAGGTCGGTTACGCTTCTGTAGTAAGT | + |
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Preference number: 6 (lower is better) Translates to: CPFGDHSQTVLS*TSQVGYASVVS Trigger: ACTTACTACAGAAGCGTAACCGACCTGAGATGTTCATGAGAGCACAGTTTGACTATGATCCCCAAAAGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132501.8 |
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| CDS GCA 72 bp | TATCTGGATAATGTCTCCAGTAACAAACTTCAGTCCTaGCTCCTTGCAAGGAATAAGGTTGTCCTTTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: YLDNVSSNKLQS*LLARNKVVLLG Trigger: CCCCAAAAGGACAACCTTATTCCTTGCAAGGAGGCAGGACTGAAGTTTGTTACTGGAGACATTATCCAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000132501.8 ENSMUST00000153318.8 |
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| CDS CCA 72 bp | CCATTGGTGTACATGTCCTCAGTAGTAACATTTGACTaGTTCAATGAAGTCTCAGGTCGGTTACGCTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: PLVYMSSVVTFD*FNEVSGRLRFC Trigger: ACAGAAGCGTAACCGACCTGAGACTTCATTGAACCAGTCAAATGTTACTACTGAGGACATGTACACCAATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 ENSMUST00000155742.2 |
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| CDS CAA 90 bp | ACAACATCCAACTGGTCAAAAATGGAACTGTGCTTAGCCAGGTACTaGTCTTTACACTTCTTCTTCTTCCCAAAGGGACTGCAACTTGGT | + |
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Preference number: 6 (lower is better) Translates to: TTSNWSKMELCLARY*SLHFFFFPKGLQLG Trigger: ACCAAGTTGCAGTCCCTTTGGGAAGAAGAAGAAGTGTAAAGACAAGTACCTGGCTAAGCACAGTTCCATTTTTGACCAGTTGGATGTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 ENSMUST00000132501.8 |
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| CDS TCA 72 bp | CTCATGAACATCTGTAGCGCAGGAAGGCGACTCTGCTaGTTAGCAATGACTTTTAATGAGATCATTCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: LMNICSAGRRLC*LAMTFNEIIPL Trigger: CAAAGGAATGATCTCATTAAAAGTCATTGCTAATCAGCAGAGTCGCCTTCCTGCGCTACAGATGTTCATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000153318.8 |
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| CDS GCA 72 bp | TTTCAAATTTGGTGCCAAACATGTTGCCCTGATAGCTaGCAAACTCCAAGAACTCATTGGCAGAGATGTTCT | + |
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Preference number: 6 (lower is better) Translates to: FQIWCQTCCPDS*QTPRTHWQRCS Trigger: AGAACATCTCTGCCAATGAGTTCTTGGAGTTTGGCAGCTATCAGGGCAACATGTTTGGCACCAAATTTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 |
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| CDS CAA 72 bp | AACTGGTCAAAAATGGAACTGTGCTTAGCCAGGTACTaGTCTTTACACTTCTTCTTCTTCCCAAAGGGACTG | + |
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Preference number: 6 (lower is better) Translates to: NWSKMELCLARY*SLHFFFFPKGL Trigger: CAGTCCCTTTGGGAAGAAGAAGAAGTGTAAAGACAAGTACCTGGCTAAGCACAGTTCCATTTTTGACCAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033775.9 ENSMUST00000114091.8 ENSMUST00000114092.8 ENSMUST00000132501.8 |
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