Pregenerated sensors for MPND (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003199Ensembl transcript IDs: ENSMUST00000133998.8, ENSMUST00000149441.8, ENSMUST00000153197.2, ENSMUST00000159340.8, ENSMUST00000159996.8, ENSMUST00000162883.8
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | CAACTGCCATCCCACCCCAGCCACAGGCTTGTGCTGTaGGCACTCAGAGACTTTATTACCCAGCCTGTCCCA | + |
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Preference number: 3 (lower is better) Translates to: QLPSHPSHRLVL*ALRDFITQPVP Trigger: TGGGACAGGCTGGGTAATAAAGTCTCTGAGTGCCCACAGCACAAGCCTGTGGCTGGGGTGGGATGGCAGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR GCA 90 bp | CAACAACTGCCATCCCACCCCAGCCACAGGCTTGTGCTGTGGGCACTCAGAGACCCAGCACGTGGCACATaGCCTGGTCCTTCGGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: QQLPSHPSHRLVLWALRDPARGT*PGPSGS Trigger: GGACCCCGAAGGACCAGGGCATGTGCCACGTGCTGG...GTCTCTGAGTGCCCACAGCACAAGCCTGTGGCTGGGGTGGGATGGCAGTTGTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR GCA 90 bp | CAACTGCCATCCCACCCCAGCCACAGGCTTGTGCTGTGGGCACTCAGAGACTTTACTCAGGGCCTGGGTTaGCAGAGTAGTAGGGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: QLPSHPSHRLVLWALRDFTQGLG*QSSRGS Trigger: GCTCCCCCTACTACTCTGGCAACCCAGGCCCTGAGT...AAAGTCTCTGAGTGCCCACAGCACAAGCCTGTGGCTGGGGTGGGATGGCAGTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR CCA 90 bp | AACTGCCATCCCACCCCAGCCACAGGCTTGTGCTGTGGGCACTCAGAGACTTTATGGGGGTGTGGCCTCTaGCTCCAAGGAACCCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: NCHPTPATGLCCGHSETLWGCGL*LQGTLP Trigger: GGGAAGGGTTCCTTGGAGCCAGAGGCCACACCCCCA...TAAAGTCTCTGAGTGCCCACAGCACAAGCCTGTGGCTGGGGTGGGATGGCAGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR CCA 90 bp | CTGCCATCCCACCCCAGCCACAGGCTTGTGCTGTGGGCACTCAGAGACTTTATTGCTTCCCTGGGGGTGTaGCCTCTGGCTCCAAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: LPSHPSHRLVLWALRDFIASLGV*PLAPRN Trigger: GTTCCTTGGAGCCAGAGGCCACACCCCCAGGGAAGC...AATAAAGTCTCTGAGTGCCCACAGCACAAGCCTGTGGCTGGGGTGGGATGGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR CCA 90 bp | CTGCCATCCCACCCCAGCCACAGGCTTGTGCTGTGGGCACTCAGAGACTTTATTGTCCATACGCTTCCCTaGGGGTGTGGCCTCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: LPSHPSHRLVLWALRDFIVHTLP*GCGLWL Trigger: GAGCCAGAGGCCACACCCCCAGGGAAGCGTATGGAC...AATAAAGTCTCTGAGTGCCCACAGCACAAGCCTGTGGCTGGGGTGGGATGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR CCA 90 bp | CTCTTTCTATATAGCCACTGTCCCATCTTCATTCAGGGAAGCCCTGTTCCCCCGGCGCCTCCTCGGCCGTaGCCCCGGGAGACAGAGACT | + |
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Preference number: 4 (lower is better) Translates to: LFLYSHCPIFIQGSPVPPAPPRP*PRETET Trigger: AGTCTCTGTCTCCCGGGGCCACGGCCGAGGAGGCGC...CGGGGGAACAGGGCTTCCCTGAATGAAGATGGGACAGTGGCTATATAGAAAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR CCA 90 bp | CCAACAACTGCCATCCCACCCCAGCCACAGGCTTGTGCTGTGGGCACTCAGAGATGCCCAGGTAGTAGATaGATAGCACCCCCTCACCGG | + |
|
Preference number: 4 (lower is better) Translates to: PTTAIPPQPQACAVGTQRCPGSR*IAPPHR Trigger: CCGGTGAGGGGGTGCTATCCATCTACTACCTGGGCA...TCTCTGAGTGCCCACAGCACAAGCCTGTGGCTGGGGTGGGATGGCAGTTGTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR CCA 90 bp | CAACTGCCATCCCACCCCAGCCACAGGCTTGTGCTGTGGGCACTCAGAGACTTTACCTGCTCCAGCACGTaGCACATGCCCTGGTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: QLPSHPSHRLVLWALRDFTCSST*HMPWSF Trigger: GAAGGACCAGGGCATGTGCCACGTGCTGGAGCAGGT...AAAGTCTCTGAGTGCCCACAGCACAAGCCTGTGGCTGGGGTGGGATGGCAGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR TCA 90 bp | CTGCCATCCCACCCCAGCCACAGGCTTGTGCTGTGGGCACTCAGAGACTTTATTGGCCCAGGCGCTGGGTaGGTTGAAGACTTGTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: LPSHPSHRLVLWALRDFIGPGAG*VEDLSS Trigger: ACTGGACAAGTCTTCAACTCACCCAGCGCCTGGGCC...AATAAAGTCTCTGAGTGCCCACAGCACAAGCCTGTGGCTGGGGTGGGATGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR GCA 90 bp | AACTGCCATCCCACCCCAGCCACAGGCTTGTGCTGTGGGCACTCAGAGACTTTATGGCGGAGTCTCGGCTaGCCAGCATGCAGTAACGGA | + |
|
Preference number: 4 (lower is better) Translates to: NCHPTPATGLCCGHSETLWRSLG*PACSNG Trigger: TCCGTTACTGCATGCTGGGCAGCCGAGACTCCGCCA...TAAAGTCTCTGAGTGCCCACAGCACAAGCCTGTGGCTGGGGTGGGATGGCAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR GCA 90 bp | CTGCCATCCCACCCCAGCCACAGGCTTGTGCTGTGGGCACTCAGAGACTTTATTCTGCAAGGAGGGTACTaGAGGGCTGTGTGGGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: LPSHPSHRLVLWALRDFILQGGY*RAVWVA Trigger: AGCCACCCACACAGCCCTGCAGTACCCTCCTTGCAG...AATAAAGTCTCTGAGTGCCCACAGCACAAGCCTGTGGCTGGGGTGGGATGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR CCA 90 bp | CAACAACTGCCATCCCACCCCAGCCACAGGCTTGTGCTGTGGGCACTCAGAGACACTTCTACCAGAGTGTaGGGGTTCCTGGCGGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: QQLPSHPSHRLVLWALRDTSTRV*GFLAES Trigger: AGACTCCGCCAGGAACCCCCACACTCTGGTAGAAGT...GTCTCTGAGTGCCCACAGCACAAGCCTGTGGCTGGGGTGGGATGGCAGTTGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR CCA 90 bp | AACTGCCATCCCACCCCAGCCACAGGCTTGTGCTGTGGGCACTCAGAGACTTTAGGGCTCCAGGCCTCTTaGAACTTCACCAGGTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: NCHPTPATGLCCGHSETLGLQAS*NFTRSG Trigger: CCCTGACCTGGTGAAGTTCCAAGAGGCCTGGAGCCC...TAAAGTCTCTGAGTGCCCACAGCACAAGCCTGTGGCTGGGGTGGGATGGCAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR CCA 90 bp | CTCTTTCTATATAGCCACTGTCCCATCTTCATTCAGGGAAGCCCTGTTCCCCCGGAGTGTGGGGGTTCCTaGCGGAGTCTCGGCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFLYSHCPIFIQGSPVPPECGGS*RSLGCP Trigger: TGGGCAGCCGAGACTCCGCCAGGAACCCCCACACTC...CGGGGGAACAGGGCTTCCCTGAATGAAGATGGGACAGTGGCTATATAGAAAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR CCA 90 bp | CAACTGCCATCCCACCCCAGCCACAGGCTTGTGCTGTGGGCACTCAGAGACTTTAGAAAGGGCAGATCTTaGACTCAGGGCCTGGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QLPSHPSHRLVLWALRDFRKGRS*TQGLGC Trigger: GCAACCCAGGCCCTGAGTCCAAGATCTGCCCTTTCT...AAAGTCTCTGAGTGCCCACAGCACAAGCCTGTGGCTGGGGTGGGATGGCAGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR TCA 90 bp | GCACTCAGAGACTTTATTACCCAGCCTGTCCCAGGACAGCAAAGCCTATGCAGCTCTGGCCCTTGTACTTaGCAGAGGCCCAGCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: ALRDFITQPVPGQQSLCSSGPCT*QRPSHS Trigger: GCTGTGGCTGGGCCTCTGTCAAGTACAAGGGCCAGA...GCTGCATAGGCTTTGCTGTCCTGGGACAGGCTGGGTAATAAAGTCTCTGAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR GCA 90 bp | TTCTATATAGCCACTGTCCCATCTTCATTCAGGGAAGCCCTGTTCCCCCGAAAACCCCCAGCCGACTCCTaGAGGGGAAGGCTCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FYIATVPSSFREALFPRKPPADS*RGRLSA Trigger: TGCTGAGAGCCTTCCCCTGCAGGAGTCGGCTGGGGG...TTTTCGGGGGAACAGGGCTTCCCTGAATGAAGATGGGACAGTGGCTATATAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR CCA 90 bp | CTCTTTCTATATAGCCACTGTCCCATCTTCATTCAGGGAAGCCCTGTTCCCCCGGCTTCTTGCAGTGTGTaGCCCAGGCGCTGGGTGAGT | + |
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Preference number: 4 (lower is better) Translates to: LFLYSHCPIFIQGSPVPPASCSV*PRRWVS Trigger: ACTCACCCAGCGCCTGGGCCACACACTGCAAGAAGC...CGGGGGAACAGGGCTTCCCTGAATGAAGATGGGACAGTGGCTATATAGAAAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR TCA 90 bp | AACTGCCATCCCACCCCAGCCACAGGCTTGTGCTGTGGGCACTCAGAGACTTTAATTTCTTGGCTGGGTTaGCGAGCTTCTTGCAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: NCHPTPATGLCCGHSETLISWLG*RASCSV Trigger: CACACTGCAAGAAGCTCGTCAACCCAGCCAAGAAAT...TAAAGTCTCTGAGTGCCCACAGCACAAGCCTGTGGCTGGGGTGGGATGGCAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR TCA 90 bp | GCACTCAGAGACTTTATTACCCAGCCTGTCCCAGGACAGCAAAGCCTATGCAGCTCACTCCGAGTCAGGTaGCAGTGGAAGTCCAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALRDFITQPVPGQQSLCSSLRVR*QWKSKR Trigger: CCTCTTGGACTTCCACTGTCACCTGACTCGGAGTGA...GCTGCATAGGCTTTGCTGTCCTGGGACAGGCTGGGTAATAAAGTCTCTGAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR TCA 90 bp | CTGCCATCCCACCCCAGCCACAGGCTTGTGCTGTGGGCACTCAGAGACTTTATTTCAGCATCTGATTGTTaGTGTCCCAGCGACCACCAA | + |
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Preference number: 4 (lower is better) Translates to: LPSHPSHRLVLWALRDFISASDC*CPSDHQ Trigger: TTGGTGGTCGCTGGGACATCAACAATCAGATGCTGA...AATAAAGTCTCTGAGTGCCCACAGCACAAGCCTGTGGCTGGGGTGGGATGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR GCA 90 bp | GCACTCAGAGACTTTATTACCCAGCCTGTCCCAGGACAGCAAAGCCTATGCAGCAGGGCTGGAAGCCATTaGTGGAGCCTTGCAGTCTCA | + |
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Preference number: 4 (lower is better) Translates to: ALRDFITQPVPGQQSLCSRAGSH*WSLAVS Trigger: TGAGACTGCAAGGCTCCAGCAATGGCTTCCAGCCCT...GCTGCATAGGCTTTGCTGTCCTGGGACAGGCTGGGTAATAAAGTCTCTGAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR CCA 90 bp | CCATCCCACCCCAGCCACAGGCTTGTGCTGTGGGCACTCAGAGACTTTATTACCGCCACGTTGAATGGCTaGAACTTGTTGATGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PSHPSHRLVLWALRDFITATLNG*NLLMAA Trigger: TGCTGCCATCAACAAGTTCCAGCCATTCAACGTGGC...GGTAATAAAGTCTCTGAGTGCCCACAGCACAAGCCTGTGGCTGGGGTGGGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR CCA 90 bp | CTGCCATCCCACCCCAGCCACAGGCTTGTGCTGTGGGCACTCAGAGACTTTATTAACGGCCACGTTGAATaGCTGGAACTTGTTGATGGC | + |
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Preference number: 4 (lower is better) Translates to: LPSHPSHRLVLWALRDFINGHVE*LELVDG Trigger: GCCATCAACAAGTTCCAGCCATTCAACGTGGCCGTT...AATAAAGTCTCTGAGTGCCCACAGCACAAGCCTGTGGCTGGGGTGGGATGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR CCA 90 bp | CTGCCATCCCACCCCAGCCACAGGCTTGTGCTGTGGGCACTCAGAGACTTTATTCCTTGCAGTCTCAACTaGTACTCCATCTGTGCGTCA | + |
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Preference number: 4 (lower is better) Translates to: LPSHPSHRLVLWALRDFIPCSLN*YSICAS Trigger: TGACGCACAGATGGAGTACCAGTTGAGACTGCAAGG...AATAAAGTCTCTGAGTGCCCACAGCACAAGCCTGTGGCTGGGGTGGGATGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR CCA 90 bp | TTCTATATAGCCACTGTCCCATCTTCATTCAGGGAAGCCCTGTTCCCCCGAAAACTGTGTGGGTGGCTGTaGTACCAGCCCACCAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: FYIATVPSSFREALFPRKLCGWL*YQPTRD Trigger: GTCCCTGGTGGGCTGGTACCACAGCCACCCACACAG...TTTTCGGGGGAACAGGGCTTCCCTGAATGAAGATGGGACAGTGGCTATATAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR GCA 90 bp | GCACTCAGAGACTTTATTACCCAGCCTGTCCCAGGACAGCAAAGCCTATGCAGCCCATTGCTGGAGCCTTaGAGTCTCAACTGGTACTCC | + |
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Preference number: 4 (lower is better) Translates to: ALRDFITQPVPGQQSLCSPLLEP*SLNWYS Trigger: GGAGTACCAGTTGAGACTGCAAGGCTCCAGCAATGG...GCTGCATAGGCTTTGCTGTCCTGGGACAGGCTGGGTAATAAAGTCTCTGAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR CCA 90 bp | GCACTCAGAGACTTTATTACCCAGCCTGTCCCAGGACAGCAAAGCCTATGCAGCGCTGGAAGCCATTGCTaGAGCCTTGCAGTCTCAACT | + |
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Preference number: 4 (lower is better) Translates to: ALRDFITQPVPGQQSLCSAGSHC*SLAVST Trigger: AGTTGAGACTGCAAGGCTCCAGCAATGGCTTCCAGC...GCTGCATAGGCTTTGCTGTCCTGGGACAGGCTGGGTAATAAAGTCTCTGAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR CCA 90 bp | CTGCCATCCCACCCCAGCCACAGGCTTGTGCTGTGGGCACTCAGAGACTTTATTTATTTGTCCAGCTTCTaGCCCTTGTACTTGACAGAG | + |
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Preference number: 4 (lower is better) Translates to: LPSHPSHRLVLWALRDFIYLSSF*PLYLTE Trigger: CTCTGTCAAGTACAAGGGCCAGAAGCTGGACAAATA...AATAAAGTCTCTGAGTGCCCACAGCACAAGCCTGTGGCTGGGGTGGGATGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR CCA 90 bp | TCTTTCTATATAGCCACTGTCCCATCTTCATTCAGGGAAGCCCTGTTCCCCCGAGGATTCCATAGTCACTaGGCCTTTGCTCAGGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: SFYIATVPSSFREALFPRGFHSH*AFAQGE Trigger: CTCCCCCTGAGCAAAGGCCCAGTGACTATGGAATCC...TCGGGGGAACAGGGCTTCCCTGAATGAAGATGGGACAGTGGCTATATAGAAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR CCA 90 bp | CTCTTTCTATATAGCCACTGTCCCATCTTCATTCAGGGAAGCCCTGTTCCCCCGCCATCTCTACGTCCATaGGGATTCCATAGTCACTGG | + |
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Preference number: 4 (lower is better) Translates to: LFLYSHCPIFIQGSPVPPPSLRP*GFHSHW Trigger: CCAGTGACTATGGAATCCCCATGGACGTAGAGATGG...CGGGGGAACAGGGCTTCCCTGAATGAAGATGGGACAGTGGCTATATAGAAAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR CCA 90 bp | TTTCTATATAGCCACTGTCCCATCTTCATTCAGGGAAGCCCTGTTCCCCCGAAAGCCAGATTTCTTGGCTaGGTTGACGAGCTTCTTGCA | + |
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Preference number: 4 (lower is better) Translates to: FLYSHCPIFIQGSPVPPKARFLG*VDELLA Trigger: TGCAAGAAGCTCGTCAACCCAGCCAAGAAATCTGGC...TTTCGGGGGAACAGGGCTTCCCTGAATGAAGATGGGACAGTGGCTATATAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR TCA 90 bp | TTCTATATAGCCACTGTCCCATCTTCATTCAGGGAAGCCCTGTTCCCCCGAAAAATGGCTGGAACTTGTTaGTGGCAGCAAAGGATGTTA | + |
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Preference number: 4 (lower is better) Translates to: FYIATVPSSFREALFPRKMAGTC*WQQRML Trigger: TAACATCCTTTGCTGCCATCAACAAGTTCCAGCCAT...TTTTCGGGGGAACAGGGCTTCCCTGAATGAAGATGGGACAGTGGCTATATAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS CCA 90 bp | GGGGGTTCCTGGCGGAGTCTCGGCTGCCCAGCATGCAGTAACGGATaGGCACTGGCACCTTGTCCATACGCTTCCCTGGGGGTGTGGCCT | + |
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Preference number: 5 (lower is better) Translates to: GGSWRSLGCPACSNG*ALAPCPYASLGVWP Trigger: AGGCCACACCCCCAGGGAAGCGTATGGACAAGGTGCCAGTGCCCATCCGTTACTGCATGCTGGGCAGCCGAGACTCCGCCAGGAACCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000153197.2 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS CCA 90 bp | AACGGATGGGCACTGGCACCTTGTCCATACGCTTCCCTGGGGGTGTaGCCTCTGGCTCCAAGGAACCCTTCCCAGGGGGTCTGTGGCCTT | + |
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Preference number: 5 (lower is better) Translates to: NGWALAPCPYASLGV*PLAPRNPSQGVCGL Trigger: AAGGCCACAGACCCCCTGGGAAGGGTTCCTTGGAGCCAGAGGCCACACCCCCAGGGAAGCGTATGGACAAGGTGCCAGTGCCCATCCGTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000153197.2 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS GCA 90 bp | CTACCAGAGTGTGGGGGTTCCTGGCGGAGTCTCGGCTGCCCAGCATaGAGTAACGGATGGGCACTGGCACCTTGTCCATACGCTTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: LPECGGSWRSLGCPA*SNGWALAPCPYASL Trigger: CAGGGAAGCGTATGGACAAGGTGCCAGTGCCCATCCGTTACTGCATGCTGGGCAGCCGAGACTCCGCCAGGAACCCCCACACTCTGGTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000153197.2 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS GCA 90 bp | GCCTCGAAGGAACAGGACCTGGTAGATCTCCTCCTCAACCGTGGCTaGAGTATCAGTGTCCCCCAGCCGACTCCTGCAGGGGAAGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: ASKEQDLVDLLLNRG*SISVPQPTPAGEGS Trigger: AGAGCCTTCCCCTGCAGGAGTCGGCTGGGGGACACTGATACTGCAGCCACGGTTGAGGAGGAGATCTACCAGGTCCTGTTCCTTCGAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000149441.8 ENSMUST00000153197.2 ENSMUST00000159996.8 |
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| CDS CCA 90 bp | TGGGCCTTTGCTCAGGGGGAGGCATCACCCAGAAAGGGCAGATCTTaGACTCAGGGCCTGGGTTGCCAGAGTAGTAGGGGGAGCACAGCA | + |
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Preference number: 5 (lower is better) Translates to: WAFAQGEASPRKGRS*TQGLGCQSSRGSTA Trigger: TGCTGTGCTCCCCCTACTACTCTGGCAACCCAGGCCCTGAGTCCAAGATCTGCCCTTTCTGGGTGATGCCTCCCCCTGAGCAAAGGCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000149441.8 ENSMUST00000153197.2 ENSMUST00000159340.8 ENSMUST00000162883.8 |
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| CDS CCA 90 bp | ACAGGCCTCGAAGGAACAGGACCTGGTAGATCTCCTCCTCAACCGTaGCTGCAGTATCAGTGTCCCCCAGCCGACTCCTGCAGGGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: TGLEGTGPGRSPPQP*LQYQCPPADSCRGR Trigger: CCTTCCCCTGCAGGAGTCGGCTGGGGGACACTGATACTGCAGCCACGGTTGAGGAGGAGATCTACCAGGTCCTGTTCCTTCGAGGCCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000149441.8 ENSMUST00000153197.2 ENSMUST00000159996.8 |
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| CDS CCA 90 bp | CCAGCATCACCTCAGGGGGAGGCATCACCCAGAAAGGGCAGATCTTaGACTCAGGGCCTGGGTTGCCAGAGTAGTAGGGGGAGCACAGCA | + |
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Preference number: 5 (lower is better) Translates to: PASPQGEASPRKGRS*TQGLGCQSSRGSTA Trigger: TGCTGTGCTCCCCCTACTACTCTGGCAACCCAGGCCCTGAGTCCAAGATCTGCCCTTTCTGGGTGATGCCTCCCCCTGAGGTGATGCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000159996.8 |
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| CDS CCA 90 bp | CCAGCCGACTCCTGCAGGGGAAGGCTCTCAGCACGGTCAGCACTGTaGGGTACCAACAAGAAGCCATCAGTCCTGCCCCAGTTACACCCT | + |
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Preference number: 5 (lower is better) Translates to: PADSCRGRLSARSAL*GTNKKPSVLPQLHP Trigger: AGGGTGTAACTGGGGCAGGACTGATGGCTTCTTGTTGGTACCCCACAGTGCTGACCGTGCTGAGAGCCTTCCCCTGCAGGAGTCGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153197.2 |
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| CDS TCA 90 bp | GGCACATGCCCTGGTCCTTCGGGGTCCTGCTGGCCAAGGACATCTTaGGTTTGTCCAGGTAGGTATGCTCTGGGCTCCAGGCCTCTTGGA | + |
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Preference number: 5 (lower is better) Translates to: GTCPGPSGSCWPRTS*VCPGRYALGSRPLG Trigger: TCCAAGAGGCCTGGAGCCCAGAGCATACCTACCTGGACAAACTCAAGATGTCCTTGGCCAGCAGGACCCCGAAGGACCAGGGCATGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS CCA 90 bp | TGCTTGAGCACACTGCAGACCTGCTCCAGCACGTGGCACATGCCCTaGTCCTTCGGGGTCCTGCTGGCCAAGGACATCTTGAGTTTGTCC | + |
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Preference number: 5 (lower is better) Translates to: CLSTLQTCSSTWHMP*SFGVLLAKDILSLS Trigger: GGACAAACTCAAGATGTCCTTGGCCAGCAGGACCCCGAAGGACCAGGGCATGTGCCACGTGCTGGAGCAGGTCTGCAGTGTGCTCAAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS TCA 90 bp | GGCTGGGTTGACGAGCTTCTTGCAGTGTGTGGCCCAGGCGCTGGGTaGGTTGAAGACTTGTCCAGTTTCCTGCCACACGATCCTGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: GWVDELLAVCGPGAG*VEDLSSFLPHDPAI Trigger: GATGGCAGGATCGTGTGGCAGGAAACTGGACAAGTCTTCAACTCACCCAGCGCCTGGGCCACACACTGCAAGAAGCTCGTCAACCCAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
||
| CDS TCA 90 bp | CAGTTACACCCTTGTCCACCCAGGCCCAGTACCCACTCTGATTGTTaGTGTCCCAGCGACCACCAAGGTAGCCCACGACCTCACTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: QLHPCPPRPSTHSDC*CPSDHQGSPRPHSE Trigger: CTCGGAGTGAGGTCGTGGGCTACCTTGGTGGTCGCTGGGACATCAACAATCAGAGTGGGTACTGGGCCTGGGTGGACAAGGGTGTAACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153197.2 |
||
| CDS CCA 90 bp | AGCTGGTGCCGGCGAAGCCAGGCGGCCTTGTATTTGTCCAGCTTCTaGCCCTTGTACTTGACAGAGGCCCAGCCACAGCCAGATTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SWCRRSQAALYLSSF*PLYLTEAQPQPDFL Trigger: CAAGAAATCTGGCTGTGGCTGGGCCTCTGTCAAGTACAAGGGCCAGAAGCTGGACAAATACAAGGCCGCCTGGCTTCGCCGGCACCAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS CCA 90 bp | TCAACTGGTACTCCATCTGTGCGTCAATGTCCTCCTCCTCAACCGTaGCTGCAGTATCAGTGTCCCCCAGCCGACTCCTGCAGGGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: STGTPSVRQCPPPQP*LQYQCPPADSCRGR Trigger: CCTTCCCCTGCAGGAGTCGGCTGGGGGACACTGATACTGCAGCCACGGTTGAGGAGGAGGACATTGACGCACAGATGGAGTACCAGTTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159340.8 |
||
| CDS CCA 90 bp | GCCAGGCAGGGCTGGAAGCCATTGCTGGAGCCTTGCAGTCTCAACTaGTACTCCATCTGTGCGTCAATGTCCTCCTCCTCAACCGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ARQGWKPLLEPCSLN*YSICASMSSSSTVA Trigger: AGCCACGGTTGAGGAGGAGGACATTGACGCACAGATGGAGTACCAGTTGAGACTGCAAGGCTCCAGCAATGGCTTCCAGCCCTGCCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159340.8 |
||
| CDS-3UTR CAA 90 bp | CAACAACTGCCATCCCACCCCAGCCACAGGCTTGTGCTGTGGGCACTCAGAGACCAGGCGCTGGGTGAGTaGAAGACTTGTCCAGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QQLPSHPSHRLVLWALRDQALGE*KTCPVS Trigger: GGAAACTGGACAAGTCTTCAACTCACCCAGCGCCTG...GTCTCTGAGTGCCCACAGCACAAGCCTGTGGCTGGGGTGGGATGGCAGTTGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS GCA 90 bp | TGTGTGGCCCAGGCGCTGGGTGAGTTGAAGACTTGTCCAGTTTCCTaGCACACGATCCTGCCATCCAGCTGCAGGTCCCCAGTAAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: CVAQALGELKTCPVS*HTILPSSCRSPVNF Trigger: GAAGTTTACTGGGGACCTGCAGCTGGATGGCAGGATCGTGTGGCAGGAAACTGGACAAGTCTTCAACTCACCCAGCGCCTGGGCCACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
||
| CDS CCA 90 bp | GCCAGGCAGGGCTGGAAGCCATTGCTGGAGCCTTGCAGTCTCAACTaGTACTCCATCTGTGCGTCAATGTCCTGCAAGGAGGGTACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ARQGWKPLLEPCSLN*YSICASMSCKEGTA Trigger: TGCAGTACCCTCCTTGCAGGACATTGACGCACAGATGGAGTACCAGTTGAGACTGCAAGGCTCCAGCAATGGCTTCCAGCCCTGCCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000149441.8 ENSMUST00000153197.2 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS-3UTR CAA 90 bp | AACTGCCATCCCACCCCAGCCACAGGCTTGTGCTGTGGGCACTCAGAGACTTTATTCTGGCCCTTGTACTaGACAGAGGCCCAGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: NCHPTPATGLCCGHSETLFWPLY*TEAQPQ Trigger: CTGTGGCTGGGCCTCTGTCAAGTACAAGGGCCAGAA...TAAAGTCTCTGAGTGCCCACAGCACAAGCCTGTGGCTGGGGTGGGATGGCAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCATCCCACCCCAGCCACAGGCTTGTGCTGTGGGCACTCAGAGACTTTATTATAGTCACTGGGCCTTaGCTCAGGGGGAGGCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: LPSHPSHRLVLWALRDFIIVTGP*LRGRHH Trigger: GTGATGCCTCCCCCTGAGCAAAGGCCCAGTGACTAT...AATAAAGTCTCTGAGTGCCCACAGCACAAGCCTGTGGCTGGGGTGGGATGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
||
| CDS-3UTR CAA 90 bp | GCACTCAGAGACTTTATTACCCAGCCTGTCCCAGGACAGCAAAGCCTATGCAGCCAGGGCTGGAAGCCATaGCTGGAGCCTTGCAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ALRDFITQPVPGQQSLCSQGWKP*LEPCSL Trigger: GAGACTGCAAGGCTCCAGCAATGGCTTCCAGCCCTG...GCTGCATAGGCTTTGCTGTCCTGGGACAGGCTGGGTAATAAAGTCTCTGAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
||
| CDS GCA 90 bp | GAAGCCATTGCTGGAGCCTTGCAGTCTCAACTGGTACTCCATCTGTaGGTCAATGTCCTCCTCCTCAACCGTGGCTGCAGTATCAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: EAIAGALQSQLVLHL*VNVLLLNRGCSISV Trigger: GACACTGATACTGCAGCCACGGTTGAGGAGGAGGACATTGACGCACAGATGGAGTACCAGTTGAGACTGCAAGGCTCCAGCAATGGCTTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159340.8 |
||
| CDS-3UTR CAA 90 bp | TTTCTATATAGCCACTGTCCCATCTTCATTCAGGGAAGCCCTGTTCCCCCGAAAGGGTTGACGAGCTTCTaGCAGTGTGTGGCCCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: FLYSHCPIFIQGSPVPPKGLTSF*QCVAQA Trigger: CGCCTGGGCCACACACTGCAAGAAGCTCGTCAACCC...TTTCGGGGGAACAGGGCTTCCCTGAATGAAGATGGGACAGTGGCTATATAGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
||
| CDS CCA 90 bp | CGTTGGTCAAGAAGCTATCTTGGACATACGCCATCTCTACGTCCATaGGGATTCCATAGTCACTGGGCCTTTGCTCAGGGGGAGGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: RWSRSYLGHTPSLRP*GFHSHWAFAQGEAS Trigger: TGATGCCTCCCCCTGAGCAAAGGCCCAGTGACTATGGAATCCCCATGGACGTAGAGATGGCGTATGTCCAAGATAGCTTCTTGACCAACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000162883.8 |
||
| CDS-3UTR CAA 90 bp | GCACTCAGAGACTTTATTACCCAGCCTGTCCCAGGACAGCAAAGCCTATGCAGCCTGGAAACGGCCACGTaGAATGGCTGGAACTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ALRDFITQPVPGQQSLCSLETAT*NGWNLL Trigger: CAACAAGTTCCAGCCATTCAACGTGGCCGTTTCCAG...GCTGCATAGGCTTTGCTGTCCTGGGACAGGCTGGGTAATAAAGTCTCTGAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTCTATATAGCCACTGTCCCATCTTCATTCAGGGAAGCCCTGTTCCCCCGACAGAAAGGGCAGATCTaGGACTCAGGGCCTGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SFYIATVPSSFREALFPRQKGQI*DSGPGL Trigger: CAACCCAGGCCCTGAGTCCAAGATCTGCCCTTTCTG...TCGGGGGAACAGGGCTTCCCTGAATGAAGATGGGACAGTGGCTATATAGAAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR CAA 90 bp | TTCTATATAGCCACTGTCCCATCTTCATTCAGGGAAGCCCTGTTCCCCCGAAAATCCAGCTTCTGGCCCTaGTACTTGACAGAGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FYIATVPSSFREALFPRKSSFWP*YLTEAQ Trigger: CTGGGCCTCTGTCAAGTACAAGGGCCAGAAGCTGGA...TTTTCGGGGGAACAGGGCTTCCCTGAATGAAGATGGGACAGTGGCTATATAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS-3UTR CAA 90 bp | TTTCTATATAGCCACTGTCCCATCTTCATTCAGGGAAGCCCTGTTCCCCCGAAACCACAGCCAGATTTCTaGGCTGGGTTGACGAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLYSHCPIFIQGSPVPPKPQPDF*AGLTSF Trigger: GAAGCTCGTCAACCCAGCCAAGAAATCTGGCTGTGG...TTTCGGGGGAACAGGGCTTCCCTGAATGAAGATGGGACAGTGGCTATATAGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTCTATATAGCCACTGTCCCATCTTCATTCAGGGAAGCCCTGTTCCCCCGAGATTTCTTGGCTGGGTaGACGAGCTTCTTGCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SFYIATVPSSFREALFPRDFLAG*TSFLQC Trigger: ACACTGCAAGAAGCTCGTCAACCCAGCCAAGAAATC...TCGGGGGAACAGGGCTTCCCTGAATGAAGATGGGACAGTGGCTATATAGAAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149441.8 |
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| CDS CCA 90 bp | CCTTGTAGAACTCAGCCAGCATCACCATCTCCTGAAGAACATCGTTaGTCAAGAAGCTATCTTGGACATACGCCATCTCTACGTCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: PCRTQPASPSPEEHR*SRSYLGHTPSLRPW Trigger: CCATGGACGTAGAGATGGCGTATGTCCAAGATAGCTTCTTGACCAACGATGTTCTTCAGGAGATGGTGATGCTGGCTGAGTTCTACAAGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000162883.8 |
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| CDS CCA 90 bp | TCCAAGAGGAACAGCACATTACTGGAAACGGCCACGTTGAATGGCTaGAACTTGTTGATGGCAGCAAAGGATGTTACTTCTACCAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SKRNSTLLETATLNG*NLLMAAKDVTSTRV Trigger: CACTCTGGTAGAAGTAACATCCTTTGCTGCCATCAACAAGTTCCAGCCATTCAACGTGGCCGTTTCCAGTAATGTGCTGTTCCTCTTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000149441.8 ENSMUST00000153197.2 ENSMUST00000159340.8 ENSMUST00000159996.8 |
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| CDS CCA 90 bp | ATCAAGAGGAACAGCACATTACTGGAAACGGCCACGTTGAATGGCTaGAACTTGTTGATGGCAGCAAAGGATGTTACTTCTACCAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: IKRNSTLLETATLNG*NLLMAAKDVTSTRV Trigger: CACTCTGGTAGAAGTAACATCCTTTGCTGCCATCAACAAGTTCCAGCCATTCAACGTGGCCGTTTCCAGTAATGTGCTGTTCCTCTTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162883.8 |
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| CDS CCA 90 bp | GTAGATCAAGAGGAACAGCACATTACTGGAAACGGCCACGTTGAATaGCTGGAACTTGTTGATGGCAGCAAAGGATGTTACTTCTACCAG | + |
|
Preference number: 5 (lower is better) Translates to: VDQEEQHITGNGHVE*LELVDGSKGCYFYQ Trigger: CTGGTAGAAGTAACATCCTTTGCTGCCATCAACAAGTTCCAGCCATTCAACGTGGCCGTTTCCAGTAATGTGCTGTTCCTCTTGATCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162883.8 |
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| CDS GCA 72 bp | CTAGGGCCATCCCAGGCCCTGCCGTGCCGCCTCCGCTaGCACCGAGGCTGCCGCTGCGCCCTCCGCTACCCG | + |
|
Preference number: 6 (lower is better) Translates to: LGPSQALPCRLR*HRGCRCALRYP Trigger: CGGGTAGCGGAGGGCGCAGCGGCAGCCTCGGTGGCAGCGGAGGCGGCACGGCAGGGCCTGGGATGGCCCTAG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS CAA 72 bp | GATAGCACCCCCTCACCGGGCTCCAGCAGCTCGTCTTaGAGCAGCACCCGAAGCGTGACCGCGCGCCTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: DSTPSPGSSSSS*SSTRSVTARLV Trigger: CACGAGGCGCGCGGTCACGCTTCGGGTGCTGCTCAAAGACGAGCTGCTGGAGCCCGGTGAGGGGGTGCTATC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS GCA 72 bp | CTACCAGAGTGTGGGGGTTCCTGGCGGAGTCTCGGCTaGCCAGCATGCAGTAACGGATGGGCACTGGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: LPECGGSWRSLG*PACSNGWALAP Trigger: AGGTGCCAGTGCCCATCCGTTACTGCATGCTGGGCAGCCGAGACTCCGCCAGGAACCCCCACACTCTGGTAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000153197.2 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS GCA 72 bp | CCCAGAAAGGGCAGATCTTGGACTCAGGGCCTGGGTTaGCAGAGTAGTAGGGGGAGCACAGCAGGGCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PRKGRSWTQGLG*QSSRGSTAGPG Trigger: GCCTGGCCCTGCTGTGCTCCCCCTACTACTCTGGCAACCCAGGCCCTGAGTCCAAGATCTGCCCTTTCTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000149441.8 ENSMUST00000153197.2 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS TCA 72 bp | CAGAGGCCCAGCCACAGCCAGATTTCTTGGCTGGGTTaGCGAGCTTCTTGCAGTGTGTGGCCCAGGCGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QRPSHSQISWLG*RASCSVWPRRW Trigger: CCAGCGCCTGGGCCACACACTGCAAGAAGCTCGTCAACCCAGCCAAGAAATCTGGCTGTGGCTGGGCCTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS GCA 72 bp | TGTGGGGGTTCCTGGCGGAGTCTCGGCTGCCCAGCATaGAGTAACGGATGGGCACTGGCACCTTGTCCATAC | + |
|
Preference number: 6 (lower is better) Translates to: CGGSWRSLGCPA*SNGWALAPCPY Trigger: GTATGGACAAGGTGCCAGTGCCCATCCGTTACTGCATGCTGGGCAGCCGAGACTCCGCCAGGAACCCCCACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000153197.2 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS CCA 72 bp | ACACTGCAGACCTGCTCCAGCACGTGGCACATGCCCTaGTCCTTCGGGGTCCTGCTGGCCAAGGACATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TLQTCSSTWHMP*SFGVLLAKDIL Trigger: CAAGATGTCCTTGGCCAGCAGGACCCCGAAGGACCAGGGCATGTGCCACGTGCTGGAGCAGGTCTGCAGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS CAA 90 bp | GTGGCCTCTGGCTCCAAGGAACCCTTCCCAGGGGGTCTGTGGCCTTaGTCCTCTGATGAGACCCCAGCCAGCACATCTTCTTCCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VASGSKEPFPGGLWP*SSDETPASTSSSSS Trigger: GGAGGAGGAAGAAGATGTGCTGGCTGGGGTCTCATCAGAGGACAAAGGCCACAGACCCCCTGGGAAGGGTTCCTTGGAGCCAGAGGCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000153197.2 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS GCA 72 bp | CTCCATCTGTGCGTCAATGTCCTGCAAGGAGGGTACTaGAGGGCTGTGTGGGTGGCTGTGGTACCAGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LHLCVNVLQGGY*RAVWVAVVPAH Trigger: GTGGGCTGGTACCACAGCCACCCACACAGCCCTGCAGTACCCTCCTTGCAGGACATTGACGCACAGATGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000149441.8 ENSMUST00000153197.2 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS CCA 72 bp | CGGCGAAGCCAGGCGGCCTTGTATTTGTCCAGCTTCTaGCCCTTGTACTTGACAGAGGCCCAGCCACAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RRSQAALYLSSF*PLYLTEAQPQP Trigger: TGGCTGTGGCTGGGCCTCTGTCAAGTACAAGGGCCAGAAGCTGGACAAATACAAGGCCGCCTGGCTTCGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS CCA 72 bp | TCCTGCAGGGGAAGGCTCTCAGCACGGTCAGCACTGTaGGGTACCAACAAGAAGCCATCAGTCCTGCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SCRGRLSARSAL*GTNKKPSVLPQ Trigger: CTGGGGCAGGACTGATGGCTTCTTGTTGGTACCCCACAGTGCTGACCGTGCTGAGAGCCTTCCCCTGCAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153197.2 |
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| CDS CAA 72 bp | ACAGAGGCCCAGCCACAGCCAGATTTCTTGGCTGGGTaGACGAGCTTCTTGCAGTGTGTGGCCCAGGCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TEAQPQPDFLAG*TSFLQCVAQAL Trigger: CAGCGCCTGGGCCACACACTGCAAGAAGCTCGTCAACCCAGCCAAGAAATCTGGCTGTGGCTGGGCCTCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS CAA 90 bp | TGCCGGCGAAGCCAGGCGGCCTTGTATTTGTCCAGCTTCTGGCCCTaGTACTTGACAGAGGCCCAGCCACAGCCAGATTTCTTGGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: CRRSQAALYLSSFWP*YLTEAQPQPDFLAG Trigger: CCCAGCCAAGAAATCTGGCTGTGGCTGGGCCTCTGTCAAGTACAAGGGCCAGAAGCTGGACAAATACAAGGCCGCCTGGCTTCGCCGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS TCA 72 bp | CCTGGTCCTTCGGGGTCCTGCTGGCCAAGGACATCTTaGGTTTGTCCAGGTAGGTATGCTCTGGGCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PGPSGSCWPRTS*VCPGRYALGSR Trigger: CCTGGAGCCCAGAGCATACCTACCTGGACAAACTCAAGATGTCCTTGGCCAGCAGGACCCCGAAGGACCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS TCA 72 bp | CCTTGTCCACCCAGGCCCAGTACCCACTCTGATTGTTaGTGTCCCAGCGACCACCAAGGTAGCCCACGACCT | + |
|
Preference number: 6 (lower is better) Translates to: PCPPRPSTHSDC*CPSDHQGSPRP Trigger: AGGTCGTGGGCTACCTTGGTGGTCGCTGGGACATCAACAATCAGAGTGGGTACTGGGCCTGGGTGGACAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153197.2 |
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| CDS GCA 72 bp | TGTCCAGTTTCCTGCCACACGATCCTGCCATCCAGCTaGAGGTCCCCAGTAAACTTCCTGCCTGCTGCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: CPVSCHTILPSS*RSPVNFLPAAV Trigger: GACCGCAGCAGGCAGGAAGTTTACTGGGGACCTGCAGCTGGATGGCAGGATCGTGTGGCAGGAAACTGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133998.8 |
||
| CDS GCA 72 bp | CAGGCGCTGGGTGAGTTGAAGACTTGTCCAGTTTCCTaGCACACGATCCTGCCATCCAGCTGCAGGTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: QALGELKTCPVS*HTILPSSCRSP Trigger: TGGGGACCTGCAGCTGGATGGCAGGATCGTGTGGCAGGAAACTGGACAAGTCTTCAACTCACCCAGCGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
||
| CDS GCA 72 bp | CTCTCATCGGCCGTAGCTACAGGCATATGTAGCTGGTaGCGGCGAAGCCAGGCGGCCTTGTATTTGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LSSAVATGICSW*RRSQAALYLSS Trigger: GCTGGACAAATACAAGGCCGCCTGGCTTCGCCGGCACCAGCTACATATGCCTGTAGCTACGGCCGATGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000153197.2 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS CCA 72 bp | CTTGACAGAGGCCCAGCCACAGCCAGATTTCTTGGCTaGGTTGACGAGCTTCTTGCAGTGTGTGGCCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LDRGPATARFLG*VDELLAVCGPG Trigger: GCCTGGGCCACACACTGCAAGAAGCTCGTCAACCCAGCCAAGAAATCTGGCTGTGGCTGGGCCTCTGTCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
||
| CDS CCA 72 bp | GGACTCTCATCGGCCGTAGCTACAGGCATATGTAGCTaGTGCCGGCGAAGCCAGGCGGCCTTGTATTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GLSSAVATGICS*CRRSQAALYLS Trigger: GGACAAATACAAGGCCGCCTGGCTTCGCCGGCACCAGCTACATATGCCTGTAGCTACGGCCGATGAGAGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000153197.2 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS CCA 72 bp | GAAGGAACAGGACCTGGTAGATCTCCTCCTCAACCGTaGCTGCAGTATCAGTGTCCCCCAGCCGACTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: EGTGPGRSPPQP*LQYQCPPADSC Trigger: GCAGGAGTCGGCTGGGGGACACTGATACTGCAGCCACGGTTGAGGAGGAGATCTACCAGGTCCTGTTCCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000149441.8 ENSMUST00000153197.2 ENSMUST00000159996.8 |
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| CDS CAA 72 bp | TGTAGCTGGTGCCGGCGAAGCCAGGCGGCCTTGTATTaGTCCAGCTTCTGGCCCTTGTACTTGACAGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: CSWCRRSQAALY*SSFWPLYLTEA Trigger: GGCCTCTGTCAAGTACAAGGGCCAGAAGCTGGACAAATACAAGGCCGCCTGGCTTCGCCGGCACCAGCTACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS CAA 72 bp | GGCTCCAAGGAACCCTTCCCAGGGGGTCTGTGGCCTTaGTCCTCTGATGAGACCCCAGCCAGCACATCTTCT | + |
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Preference number: 6 (lower is better) Translates to: GSKEPFPGGLWP*SSDETPASTSS Trigger: AGAAGATGTGCTGGCTGGGGTCTCATCAGAGGACAAAGGCCACAGACCCCCTGGGAAGGGTTCCTTGGAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000153197.2 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS CAA 90 bp | GGGTTGACGAGCTTCTTGCAGTGTGTGGCCCAGGCGCTGGGTGAGTaGAAGACTTGTCCAGTTTCCTGCCACACGATCCTGCCATCCAGC | + |
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Preference number: 6 (lower is better) Translates to: GLTSFLQCVAQALGE*KTCPVSCHTILPSS Trigger: GCTGGATGGCAGGATCGTGTGGCAGGAAACTGGACAAGTCTTCAACTCACCCAGCGCCTGGGCCACACACTGCAAGAAGCTCGTCAACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS CAA 90 bp | GAGGCCCAGCCACAGCCAGATTTCTTGGCTGGGTTGACGAGCTTCTaGCAGTGTGTGGCCCAGGCGCTGGGTGAGTTGAAGACTTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: EAQPQPDFLAGLTSF*QCVAQALGELKTCP Trigger: TGGACAAGTCTTCAACTCACCCAGCGCCTGGGCCACACACTGCAAGAAGCTCGTCAACCCAGCCAAGAAATCTGGCTGTGGCTGGGCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS CAA 90 bp | TTCTGGCCCTTGTACTTGACAGAGGCCCAGCCACAGCCAGATTTCTaGGCTGGGTTGACGAGCTTCTTGCAGTGTGTGGCCCAGGCGCTG | + |
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Preference number: 6 (lower is better) Translates to: FWPLYLTEAQPQPDF*AGLTSFLQCVAQAL Trigger: CAGCGCCTGGGCCACACACTGCAAGAAGCTCGTCAACCCAGCCAAGAAATCTGGCTGTGGCTGGGCCTCTGTCAAGTACAAGGGCCAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS CAA 90 bp | ACAGGCATATGTAGCTGGTGCCGGCGAAGCCAGGCGGCCTTGTATTaGTCCAGCTTCTGGCCCTTGTACTTGACAGAGGCCCAGCCACAG | + |
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Preference number: 6 (lower is better) Translates to: TGICSWCRRSQAALY*SSFWPLYLTEAQPQ Trigger: CTGTGGCTGGGCCTCTGTCAAGTACAAGGGCCAGAAGCTGGACAAATACAAGGCCGCCTGGCTTCGCCGGCACCAGCTACATATGCCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS CAA 90 bp | TTGTACTTGACAGAGGCCCAGCCACAGCCAGATTTCTTGGCTGGGTaGACGAGCTTCTTGCAGTGTGTGGCCCAGGCGCTGGGTGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: LYLTEAQPQPDFLAG*TSFLQCVAQALGEL Trigger: CAACTCACCCAGCGCCTGGGCCACACACTGCAAGAAGCTCGTCAACCCAGCCAAGAAATCTGGCTGTGGCTGGGCCTCTGTCAAGTACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS CAA 90 bp | CGAAGCCAGGCGGCCTTGTATTTGTCCAGCTTCTGGCCCTTGTACTaGACAGAGGCCCAGCCACAGCCAGATTTCTTGGCTGGGTTGACG | + |
|
Preference number: 6 (lower is better) Translates to: RSQAALYLSSFWPLY*TEAQPQPDFLAGLT Trigger: CGTCAACCCAGCCAAGAAATCTGGCTGTGGCTGGGCCTCTGTCAAGTACAAGGGCCAGAAGCTGGACAAATACAAGGCCGCCTGGCTTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS CAA 90 bp | GTAGCTACAGGCATATGTAGCTGGTGCCGGCGAAGCCAGGCGGCCTaGTATTTGTCCAGCTTCTGGCCCTTGTACTTGACAGAGGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VATGICSWCRRSQAA*YLSSFWPLYLTEAQ Trigger: CTGGGCCTCTGTCAAGTACAAGGGCCAGAAGCTGGACAAATACAAGGCCGCCTGGCTTCGCCGGCACCAGCTACATATGCCTGTAGCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS TCA 72 bp | GCTTCTTGCAGTGTGTGGCCCAGGCGCTGGGTGAGTTaGAGACTTGTCCAGTTTCCTGCCACACGATCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ASCSVWPRRWVS*RLVQFPATRSC Trigger: GCAGGATCGTGTGGCAGGAAACTGGACAAGTCTTCAACTCACCCAGCGCCTGGGCCACACACTGCAAGAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS TCA 72 bp | AGGGGAAGGCTCTCAGCACGGTCAGCATCTGATTGTTaGTGTCCCAGCGACCACCAAGGTAGCCCACGACCT | + |
|
Preference number: 6 (lower is better) Translates to: RGRLSARSASDC*CPSDHQGSPRP Trigger: AGGTCGTGGGCTACCTTGGTGGTCGCTGGGACATCAACAATCAGATGCTGACCGTGCTGAGAGCCTTCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 |
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| CDS GCA 72 bp | CAGCACTGTGGGGTACCAACAAGAAGCCATCAGTCCTaGCCCAGTTACACCCTTGTCCACCCAGGCCCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: QHCGVPTRSHQS*PSYTLVHPGPV Trigger: TACTGGGCCTGGGTGGACAAGGGTGTAACTGGGGCAGGACTGATGGCTTCTTGTTGGTACCCCACAGTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153197.2 |
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| CDS CAA 72 bp | CCACAGCCAGATTTCTTGGCTGGGTTGACGAGCTTCTaGCAGTGTGTGGCCCAGGCGCTGGGTGAGTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PQPDFLAGLTSF*QCVAQALGELK Trigger: CTTCAACTCACCCAGCGCCTGGGCCACACACTGCAAGAAGCTCGTCAACCCAGCCAAGAAATCTGGCTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS GCA 72 bp | GCTGGAGCCTTGCAGTCTCAACTGGTACTCCATCTGTaGGTCAATGTCCTCCTCCTCAACCGTGGCTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: AGALQSQLVLHL*VNVLLLNRGCS Trigger: ACTGCAGCCACGGTTGAGGAGGAGGACATTGACGCACAGATGGAGTACCAGTTGAGACTGCAAGGCTCCAGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159340.8 |
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| CDS CCA 72 bp | ACGCCATCTCTACGTCCATGGGGATTCCATAGTCACTaGGCCTTTGCTCAGGGGGAGGCATCACCCAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: TPSLRPWGFHSH*AFAQGEASPRK Trigger: CTTTCTGGGTGATGCCTCCCCCTGAGCAAAGGCCCAGTGACTATGGAATCCCCATGGACGTAGAGATGGCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000162883.8 |
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| CDS CAA 72 bp | AGCTTCTTGCAGTGTGTGGCCCAGGCGCTGGGTGAGTaGAAGACTTGTCCAGTTTCCTGCCACACGATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SFLQCVAQALGE*KTCPVSCHTIL Trigger: CAGGATCGTGTGGCAGGAAACTGGACAAGTCTTCAACTCACCCAGCGCCTGGGCCACACACTGCAAGAAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS CAA 72 bp | AGCCAGGCGGCCTTGTATTTGTCCAGCTTCTGGCCCTaGTACTTGACAGAGGCCCAGCCACAGCCAGATTTC | + |
|
Preference number: 6 (lower is better) Translates to: SQAALYLSSFWP*YLTEAQPQPDF Trigger: GAAATCTGGCTGTGGCTGGGCCTCTGTCAAGTACAAGGGCCAGAAGCTGGACAAATACAAGGCCGCCTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS CAA 72 bp | GGCATATGTAGCTGGTGCCGGCGAAGCCAGGCGGCCTaGTATTTGTCCAGCTTCTGGCCCTTGTACTTGACA | + |
|
Preference number: 6 (lower is better) Translates to: GICSWCRRSQAA*YLSSFWPLYLT Trigger: TGTCAAGTACAAGGGCCAGAAGCTGGACAAATACAAGGCCGCCTGGCTTCGCCGGCACCAGCTACATATGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS CAA 90 bp | CATCTTGAGTTTGTCCAGGTAGGTATGCTCTGGGCTCCAGGCCTCTaGGAACTTCACCAGGTCAGGGGCACCCTTGTAGAACTCAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: HLEFVQVGMLWAPGL*ELHQVRGTLVELSQ Trigger: CTGGCTGAGTTCTACAAGGGTGCCCCTGACCTGGTGAAGTTCCAAGAGGCCTGGAGCCCAGAGCATACCTACCTGGACAAACTCAAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS TCA 72 bp | CGGCCTTGTATTTGTCCAGCTTCTGGCCCTTGTACTTaGCAGAGGCCCAGCCACAGCCAGATTTCTTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RPCICPASGPCT*QRPSHSQISWL Trigger: CAGCCAAGAAATCTGGCTGTGGCTGGGCCTCTGTCAAGTACAAGGGCCAGAAGCTGGACAAATACAAGGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS CCA 72 bp | GGCTGGAAGCCATTGCTGGAGCCTTGCAGTCTCAACTaGTACTCCATCTGTGCGTCAATGTCCTCCTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: GWKPLLEPCSLN*YSICASMSSSS Trigger: TGAGGAGGAGGACATTGACGCACAGATGGAGTACCAGTTGAGACTGCAAGGCTCCAGCAATGGCTTCCAGCC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159340.8 |
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| CDS CCA 72 bp | GGCTGGAAGCCATTGCTGGAGCCTTGCAGTCTCAACTaGTACTCCATCTGTGCGTCAATGTCCTGCAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: GWKPLLEPCSLN*YSICASMSCKE Trigger: CTCCTTGCAGGACATTGACGCACAGATGGAGTACCAGTTGAGACTGCAAGGCTCCAGCAATGGCTTCCAGCC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000149441.8 ENSMUST00000153197.2 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS CAA 72 bp | TTGTACTTGACAGAGGCCCAGCCACAGCCAGATTTCTaGGCTGGGTTGACGAGCTTCTTGCAGTGTGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LYLTEAQPQPDF*AGLTSFLQCVA Trigger: GGCCACACACTGCAAGAAGCTCGTCAACCCAGCCAAGAAATCTGGCTGTGGCTGGGCCTCTGTCAAGTACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS CAA 72 bp | GCGGCCTTGTATTTGTCCAGCTTCTGGCCCTTGTACTaGACAGAGGCCCAGCCACAGCCAGATTTCTTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: AALYLSSFWPLY*TEAQPQPDFLA Trigger: AGCCAAGAAATCTGGCTGTGGCTGGGCCTCTGTCAAGTACAAGGGCCAGAAGCTGGACAAATACAAGGCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000133998.8 ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS CCA 72 bp | AGAAGCTATCTTGGACATACGCCATCTCTACGTCCATaGGGATTCCATAGTCACTGGGCCTTTGCTCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RSYLGHTPSLRP*GFHSHWAFAQG Trigger: CCCCTGAGCAAAGGCCCAGTGACTATGGAATCCCCATGGACGTAGAGATGGCGTATGTCCAAGATAGCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000162883.8 |
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| CDS CAA 90 bp | AGGAACAGCACATTACTGGAAACGGCCACGTTGAATGGCTGGAACTaGTTGATGGCAGCAAAGGATGTTACTTCTACCAGAGTGTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RNSTLLETATLNGWN*LMAAKDVTSTRVWG Trigger: CCCCCACACTCTGGTAGAAGTAACATCCTTTGCTGCCATCAACAAGTTCCAGCCATTCAACGTGGCCGTTTCCAGTAATGTGCTGTTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000149441.8 ENSMUST00000153197.2 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS CCA 72 bp | GAGGAACAGCACATTACTGGAAACGGCCACGTTGAATaGCTGGAACTTGTTGATGGCAGCAAAGGATGTTAC | + |
|
Preference number: 6 (lower is better) Translates to: EEQHITGNGHVE*LELVDGSKGCY Trigger: GTAACATCCTTTGCTGCCATCAACAAGTTCCAGCCATTCAACGTGGCCGTTTCCAGTAATGTGCTGTTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000149441.8 ENSMUST00000153197.2 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS CAA 72 bp | TCCAAGAGGAACAGCACATTACTGGAAACGGCCACGTaGAATGGCTGGAACTTGTTGATGGCAGCAAAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SKRNSTLLETAT*NGWNLLMAAKD Trigger: ATCCTTTGCTGCCATCAACAAGTTCCAGCCATTCAACGTGGCCGTTTCCAGTAATGTGCTGTTCCTCTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000149441.8 ENSMUST00000153197.2 ENSMUST00000159340.8 ENSMUST00000159996.8 |
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| CDS CAA 72 bp | CATCTCCTGAAGAACATCGTTGGTCAAGAAGCTATCTaGGACATACGCCATCTCTACGTCCATGGGGATTCC | + |
|
Preference number: 6 (lower is better) Translates to: HLLKNIVGQEAI*DIRHLYVHGDS Trigger: GGAATCCCCATGGACGTAGAGATGGCGTATGTCCAAGATAGCTTCTTGACCAACGATGTTCTTCAGGAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000162883.8 |
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| CDS CAA 90 bp | CAGCATCACCATCTCCTGAAGAACATCGTTGGTCAAGAAGCTATCTaGGACATACGCCATCTCTACGTCCATGGGGATTCCATAGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: QHHHLLKNIVGQEAI*DIRHLYVHGDSIVT Trigger: AGTGACTATGGAATCCCCATGGACGTAGAGATGGCGTATGTCCAAGATAGCTTCTTGACCAACGATGTTCTTCAGGAGATGGTGATGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000162883.8 |
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| CDS CCA 72 bp | ACTCAGCCAGCATCACCATCTCCTGAAGAACATCGTTaGTCAAGAAGCTATCTTGGACATACGCCATCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: TQPASPSPEEHR*SRSYLGHTPSL Trigger: TAGAGATGGCGTATGTCCAAGATAGCTTCTTGACCAACGATGTTCTTCAGGAGATGGTGATGCTGGCTGAGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000149441.8 ENSMUST00000159340.8 ENSMUST00000162883.8 |
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| CDS CAA 72 bp | ATCAAGAGGAACAGCACATTACTGGAAACGGCCACGTaGAATGGCTGGAACTTGTTGATGGCAGCAAAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: IKRNSTLLETAT*NGWNLLMAAKD Trigger: ATCCTTTGCTGCCATCAACAAGTTCCAGCCATTCAACGTGGCCGTTTCCAGTAATGTGCTGTTCCTCTTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162883.8 |
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| CDS CCA 72 bp | AACAGCACATTACTGGAAACGGCCACGTTGAATGGCTaGAACTTGTTGATGGCAGCAAAGGATGTTACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: NSTLLETATLNG*NLLMAAKDVTS Trigger: AGAAGTAACATCCTTTGCTGCCATCAACAAGTTCCAGCCATTCAACGTGGCCGTTTCCAGTAATGTGCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000149441.8 ENSMUST00000153197.2 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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| CDS CAA 72 bp | ACATTACTGGAAACGGCCACGTTGAATGGCTGGAACTaGTTGATGGCAGCAAAGGATGTTACTTCTACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: TLLETATLNGWN*LMAAKDVTSTR Trigger: TCTGGTAGAAGTAACATCCTTTGCTGCCATCAACAAGTTCCAGCCATTCAACGTGGCCGTTTCCAGTAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000149441.8 ENSMUST00000153197.2 ENSMUST00000159340.8 ENSMUST00000159996.8 ENSMUST00000162883.8 |
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