Pregenerated sensors for MPLKIP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000012429Ensembl transcript IDs: ENSMUST00000049744.4, ENSMUST00000221480.2
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTTGTGGTATGGATATGAAGTGTCTGCCCAAATGGGTCATGTGTTaGAGGCTTGTCTGGTCACAGGGAAGTGATGAGATTGTCAGGGTA | + |
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Preference number: 1 (lower is better) Translates to: CCGMDMKCLPKWVMC*RLVWSQGSDEIVRV Trigger: TACCCTGACAATCTCATCACTTCCCTGTGACCAGACAAGCCTTCAACACATGACCCATTTGGGCAGACACTTCATATCCATACCACAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| 3UTR CCA 90 bp | TCGTTGTCATGGAAGTCATTTGAGATTACTATTAGTCATTTGTTGTaGTATGGATATGAAGTGTCTGCCCAAATGGGTCATGTGTTGAAG | + |
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Preference number: 1 (lower is better) Translates to: SLSWKSFEITISHLL*YGYEVSAQMGHVLK Trigger: CTTCAACACATGACCCATTTGGGCAGACACTTCATATCCATACCACAACAAATGACTAATAGTAATCTCAAATGACTTCCATGACAACGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| 3UTR CCA 90 bp | AGATATACCAAAGGTCTGCTAATCATTATTCAAAGTCATCATCCTTaGGTTCAACTCTTTTACACAAGTAAAAGTTCTGTCCAGGATGTT | + |
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Preference number: 1 (lower is better) Translates to: RYTKGLLIIIQSHHP*VQLFYTSKSSVQDV Trigger: AACATCCTGGACAGAACTTTTACTTGTGTAAAAGAGTTGAACCCAAGGATGATGACTTTGAATAATGATTAGCAGACCTTTGGTATATCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049744.4 ENSMUST00000221480.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTTCCAGTGGGTCCCCACCCCAATAACAAATAGTTATGGCTTACCTAGGTGGGAGGCCCCTTGCTCTTaGAAACTTTATATGCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: SFQWVPTPITNSYGLPRWEAPCS*KLYMPQ Trigger: CTGAGGCATATAAAGTTTGCAAGAGCAAGGGGCCTC...CCACCTAGGTAAGCCATAACTATTTGTTATTGGGGTGGGGACCCACTGGAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| 3UTR-3UTR TCA 90 bp | GCCATCACTGGGAAGAGAGGCCCCTTGCTCTTGCAAACTTTATATGCCTCAGTAGAAAACTGTGTTCTATaGTACACACTCCCAGATAGC | + |
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Preference number: 2 (lower is better) Translates to: AITGKRGPLLLQTLYASVENCVL*YTLPDS Trigger: GCTATCTGGGAGTGTGTATCATAGAACACAGTTTTC...TACTGAGGCATATAAAGTTTGCAAGAGCAAGGGGCCTCTCTTCCCAGTGATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| 3UTR-3UTR TCA 90 bp | TCCTTCCAGTGGGTCCCCACCCCAATAACAAATAGTTATGGCTTACCTAGGTGGTCCGCAGACATATTTTaGTTCACCTCAAGACCAACT | + |
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Preference number: 2 (lower is better) Translates to: SFQWVPTPITNSYGLPRWSADIF*FTSRPT Trigger: AGTTGGTCTTGAGGTGAATCAAAATATGTCTGCGGA...CCACCTAGGTAAGCCATAACTATTTGTTATTGGGGTGGGGACCCACTGGAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| 3UTR-3UTR CCA 90 bp | GTAGAGACAGGCAAAGTTGCTCTAGAAAGGCTCCTCTTATCCCTGGCCTCCTCCCAAAGTCATCATCCTTaGGTTCAACTCTTTTACACA | + |
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Preference number: 2 (lower is better) Translates to: VETGKVALERLLLSLASSQSHHP*VQLFYT Trigger: TGTGTAAAAGAGTTGAACCCAAGGATGATGACTTTG...GGAGGAGGCCAGGGATAAGAGGAGCCTTTCTAGAGCAACTTTGCCTGTCTCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| 3UTR-3UTR CCA 90 bp | TCGGCCATCACTGGGAAGAGAGGCCCCTTGCTCTTGCAAACTTTATATGCCTCAACCAAAGTCCCTCCTTaGTTTTCCTTTGGCATTTTA | + |
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Preference number: 2 (lower is better) Translates to: SAITGKRGPLLLQTLYASTKVPP*FSFGIL Trigger: TAAAATGCCAAAGGAAAACCAAGGAGGGACTTTGGT...TGAGGCATATAAAGTTTGCAAGAGCAAGGGGCCTCTCTTCCCAGTGATGGCCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| 3UTR CAA 90 bp | GGGTCATGTGTTGAAGGCTTGTCTGGTCACAGGGAAGTGATGAGATaGTCAGGGTATTTACTTCCTAAGTGGACTAATACCTTAATGGGT | + |
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Preference number: 2 (lower is better) Translates to: GSCVEGLSGHREVMR*SGYLLPKWTNTLMG Trigger: ACCCATTAAGGTATTAGTCCACTTAGGAAGTAAATACCCTGACAATCTCATCACTTCCCTGTGACCAGACAAGCCTTCAACACATGACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| 3UTR-3UTR CCA 90 bp | TCCTTCCAGTGGGTCCCCACCCCAATAACAAATAGTTATGGCTTACCTAGGTGGCAGCTGAACTTCCACTaGAACTTTAGAAACTATGAA | + |
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Preference number: 2 (lower is better) Translates to: SFQWVPTPITNSYGLPRWQLNFH*NFRNYE Trigger: TTCATAGTTTCTAAAGTTCCAGTGGAAGTTCAGCTG...CCACCTAGGTAAGCCATAACTATTTGTTATTGGGGTGGGGACCCACTGGAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| 3UTR-3UTR GCA 90 bp | TCCTTCCAGTGGGTCCCCACCCCAATAACAAATAGTTATGGCTTACCTAGGTGGGGCAGAGCACTGAACTaGATATATATAGTTTATTCT | + |
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Preference number: 2 (lower is better) Translates to: SFQWVPTPITNSYGLPRWGRALN*IYIVYS Trigger: AGAATAAACTATATATATGCAGTTCAGTGCTCTGCC...CCACCTAGGTAAGCCATAACTATTTGTTATTGGGGTGGGGACCCACTGGAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| 3UTR-3UTR TCA 90 bp | AAAGGTCTGCTAATCATTATTCAAAGTCATCATCCTTGGGTTCAACTCTTTTACTGTCCAGGATGTTCCTaGCACATGAAGCTTCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: KGLLIIIQSHHPWVQLFYCPGCS*HMKLPG Trigger: ACCTGGAAGCTTCATGTGTCAGGAACATCCTGGACA...GTAAAAGAGTTGAACCCAAGGATGATGACTTTGAATAATGATTAGCAGACCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049744.4 ENSMUST00000221480.2 |
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| 3UTR-3UTR TCA 90 bp | TTGTCCTATCATTTCCGCTGTTATCAACACTTGATAAAGTTGGAGATATACCAATGTCCAGGATGTTCCTaGCACATGAAGCTTCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: LSYHFRCYQHLIKLEIYQCPGCS*HMKLPG Trigger: ACCTGGAAGCTTCATGTGTCAGGAACATCCTGGACA...TTGGTATATCTCCAACTTTATCAAGTGTTGATAACAGCGGAAATGATAGGACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049744.4 ENSMUST00000221480.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGCTAATCATTATTCAAAGTCATCATCCTTGGGTTCAACTCTTTTACACAAGGATGTTCCTGACACATaGAGCTTCCAGGTGAATTTC | + |
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Preference number: 2 (lower is better) Translates to: SANHYSKSSSLGSTLLHKDVPDT*SFQVNF Trigger: GAAATTCACCTGGAAGCTTCATGTGTCAGGAACATC...CTTGTGTAAAAGAGTTGAACCCAAGGATGATGACTTTGAATAATGATTAGCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049744.4 ENSMUST00000221480.2 |
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| 3UTR CAA 90 bp | TTTATTTCGTTGTCATGGAAGTCATTTGAGATTACTATTAGTCATTaGTTGTGGTATGGATATGAAGTGTCTGCCCAAATGGGTCATGTG | + |
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Preference number: 2 (lower is better) Translates to: FISLSWKSFEITISH*LWYGYEVSAQMGHV Trigger: CACATGACCCATTTGGGCAGACACTTCATATCCATACCACAACAAATGACTAATAGTAATCTCAAATGACTTCCATGACAACGAAATAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| 3UTR CCA 72 bp | ATGCCTCAGTACAGGGGAACACCAGGGCCAAGAAGCTaGAGTGAGCTTCTTGTAGGGGAGCAGGGCTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: MPQYRGTPGPRS*SELLVGEQGWG Trigger: CCCCCAGCCCTGCTCCCCTACAAGAAGCTCACTCCAGCTTCTTGGCCCTGGTGTTCCCCTGTACTGAGGCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| 3UTR CCA 72 bp | AGAAGCTGGAGTGAGCTTCTTGTAGGGGAGCAGGGCTaGGGGGAGGGTATAGGGAACTTTCGGGATAGCATT | + |
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Preference number: 3 (lower is better) Translates to: RSWSELLVGEQG*GEGIGNFRDSI Trigger: AATGCTATCCCGAAAGTTCCCTATACCCTCCCCCCAGCCCTGCTCCCCTACAAGAAGCTCACTCCAGCTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| 3UTR GCA 72 bp | TGGCCTAGTCGGCCATCACTGGGAAGAGAGGCCCCTTaGTCTTGCAAACTTTATATGCCTCAGTACAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: WPSRPSLGREAP*SCKLYMPQYRG Trigger: TCCCCTGTACTGAGGCATATAAAGTTTGCAAGAGCAAGGGGCCTCTCTTCCCAGTGATGGCCGACTAGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| 3UTR GCA 72 bp | TGGGAAGAGAGGCCCCTTGCTCTTGCAAACTTTATATaGCTCAGTACAGGGGAACACCAGGGCCAAGAAGCT | + |
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Preference number: 3 (lower is better) Translates to: WEERPLALANFI*LSTGEHQGQEA Trigger: AGCTTCTTGGCCCTGGTGTTCCCCTGTACTGAGGCATATAAAGTTTGCAAGAGCAAGGGGCCTCTCTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| 3UTR GCA 72 bp | GAACTAACCAGTACCCCCACAGCTCGTGTCTCTAGCTaGATATGTAGCAGAAGATGGCCTAGTCGGCCATCA | + |
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Preference number: 3 (lower is better) Translates to: ELTSTPTARVSS*ICSRRWPSRPS Trigger: TGATGGCCGACTAGGCCATCTTCTGCTACATATGCAGCTAGAGACACGAGCTGTGGGGGTACTGGTTAGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| 3UTR CCA 72 bp | CTCTTATCCCTGGCCTCCTCCTGTCTTTCTGCAGCTTaGTTGCCAAAGGTGAACAGCTTTTGCCATATCCGC | + |
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Preference number: 3 (lower is better) Translates to: LLSLASSCLSAA*LPKVNSFCHIR Trigger: GCGGATATGGCAAAAGCTGTTCACCTTTGGCAACCAAGCTGCAGAAAGACAGGAGGAGGCCAGGGATAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| 3UTR GCA 72 bp | ATGATGTTATCACTGGGAGGTAGAGACAGGCAAAGTTaGTCTAGAAAGGCTCCTCTTATCCCTGGCCTCCTC | + |
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Preference number: 3 (lower is better) Translates to: MMLSLGGRDRQS*SRKAPLIPGLL Trigger: GAGGAGGCCAGGGATAAGAGGAGCCTTTCTAGAGCAACTTTGCCTGTCTCTACCTCCCAGTGATAACATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| 3UTR CCA 72 bp | GCATATGTAGCAGAAGATGGCCTAGTCGGCCATCACTaGGAAGAGAGGCCCCTTGCTCTTGCAAACTTTATA | + |
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Preference number: 3 (lower is better) Translates to: AYVAEDGLVGHH*EERPLALANFI Trigger: TATAAAGTTTGCAAGAGCAAGGGGCCTCTCTTCCCAGTGATGGCCGACTAGGCCATCTTCTGCTACATATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| 3UTR-3UTR CAA 90 bp | GCCATCACTGGGAAGAGAGGCCCCTTGCTCTTGCAAACTTTATATGCCTCAGTAAGGGAAGTGATGAGATaGTCAGGGTATTTACTTCCT | + |
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Preference number: 3 (lower is better) Translates to: AITGKRGPLLLQTLYASVREVMR*SGYLLP Trigger: AGGAAGTAAATACCCTGACAATCTCATCACTTCCCT...TACTGAGGCATATAAAGTTTGCAAGAGCAAGGGGCCTCTCTTCCCAGTGATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| 3UTR-3UTR CAA 90 bp | GCCATCACTGGGAAGAGAGGCCCCTTGCTCTTGCAAACTTTATATGCCTCAGTAACATACCACCTTCTTTaGCTTCAAGAGAAAGTAAGC | + |
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Preference number: 3 (lower is better) Translates to: AITGKRGPLLLQTLYASVTYHLL*LQEKVS Trigger: GCTTACTTTCTCTTGAAGCAAAAGAAGGTGGTATGT...TACTGAGGCATATAAAGTTTGCAAGAGCAAGGGGCCTCTCTTCCCAGTGATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| 3UTR TCA 72 bp | ATGGATATGAAGTGTCTGCCCAAATGGGTCATGTGTTaGAGGCTTGTCTGGTCACAGGGAAGTGATGAGATT | + |
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Preference number: 3 (lower is better) Translates to: MDMKCLPKWVMC*RLVWSQGSDEI Trigger: AATCTCATCACTTCCCTGTGACCAGACAAGCCTTCAACACATGACCCATTTGGGCAGACACTTCATATCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| 3UTR-3UTR CAA 90 bp | TCCTTCCAGTGGGTCCCCACCCCAATAACAAATAGTTATGGCTTACCTAGGTGGCAACACTTGATAAAGTaGGAGATATACCAAAGGTCT | + |
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Preference number: 3 (lower is better) Translates to: SFQWVPTPITNSYGLPRWQHLIK*EIYQRS Trigger: AGACCTTTGGTATATCTCCAACTTTATCAAGTGTTG...CCACCTAGGTAAGCCATAACTATTTGTTATTGGGGTGGGGACCCACTGGAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| 3UTR GCA 72 bp | CTTTCTGCAGCTTGGTTGCCAAAGGTGAACAGCTTTTaGCATATCCGCAGACATATTTTGATTCACCTCAAG | + |
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Preference number: 3 (lower is better) Translates to: LSAAWLPKVNSF*HIRRHILIHLK Trigger: CTTGAGGTGAATCAAAATATGTCTGCGGATATGGCAAAAGCTGTTCACCTTTGGCAACCAAGCTGCAGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| 3UTR CCA 72 bp | TGGAAGTCATTTGAGATTACTATTAGTCATTTGTTGTaGTATGGATATGAAGTGTCTGCCCAAATGGGTCAT | + |
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Preference number: 3 (lower is better) Translates to: WKSFEITISHLL*YGYEVSAQMGH Trigger: ATGACCCATTTGGGCAGACACTTCATATCCATACCACAACAAATGACTAATAGTAATCTCAAATGACTTCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| CDS-3UTR CCA 90 bp | GTAGAGACAGGCAAAGTTGCTCTAGAAAGGCTCCTCTTATCCCTGGCCTCCTCCCCGCAGGGCGGAGTGTaGTGCGGACTCCCGTACCCG | + |
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Preference number: 4 (lower is better) Translates to: VETGKVALERLLLSLASSPQGGV*CGLPYP Trigger: CGGGTACGGGAGTCCGCACCACACTCCGCCCTGCGG...GGAGGAGGCCAGGGATAAGAGGAGCCTTTCTAGAGCAACTTTGCCTGTCTCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| CDS-3UTR CCA 90 bp | TCGGCCATCACTGGGAAGAGAGGCCCCTTGCTCTTGCAAACTTTATATGCCTCAACCCCGCGGGGGACCTaGAGTAGGAGCCTGGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: SAITGKRGPLLLQTLYASTPRGT*SRSLGS Trigger: GCTACCCAGGCTCCTACTCCAGGTCCCCCGCGGGGT...TGAGGCATATAAAGTTTGCAAGAGCAAGGGGCCTCTCTTCCCAGTGATGGCCGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| CDS-3UTR CCA 90 bp | GTAGAGACAGGCAAAGTTGCTCTAGAAAGGCTCCTCTTATCCCTGGCCTCCTCCTGGTGTAGATGTCCTTaGAGAACCCTGGGGGTAGGT | + |
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Preference number: 4 (lower is better) Translates to: VETGKVALERLLLSLASSWCRCP*RTLGVG Trigger: ACCTACCCCCAGGGTTCTCCAAGGACATCTACACCA...GGAGGAGGCCAGGGATAAGAGGAGCCTTTCTAGAGCAACTTTGCCTGTCTCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| CDS-3UTR CCA 90 bp | GAAACTATGAACCAAAGTCCCTCCTTGGTTTTCCTTTGGCATTTTATCACAATGCCTGGAGTAGGAGCCTaGGTAGCCGCCCGGGGACGG | + |
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Preference number: 4 (lower is better) Translates to: ETMNQSPSLVFLWHFITMPGVGA*VAARGR Trigger: CCGTCCCCGGGCGGCTACCCAGGCTCCTACTCCAGG...CATTGTGATAAAATGCCAAAGGAAAACCAAGGAGGGACTTTGGTTCATAGTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| CDS-3UTR GCA 90 bp | TATCATTTCCGCTGTTATCAACACTTGATAAAGTTGGAGATATACCAAAGGTCTCAGGGCGGAGTGTGGTaGGGACTCCCGTACCCGTCC | + |
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Preference number: 4 (lower is better) Translates to: YHFRCYQHLIKLEIYQRSQGGVW*GLPYPS Trigger: GGACGGGTACGGGAGTCCGCACCACACTCCGCCCTG...AGACCTTTGGTATATCTCCAACTTTATCAAGTGTTGATAACAGCGGAAATGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| CDS-3UTR CCA 90 bp | TATCATTTCCGCTGTTATCAACACTTGATAAAGTTGGAGATATACCAAAGGTCTCCGTGCCGCGGAGACTaGCTGCTCCCGTACGGCCTA | + |
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Preference number: 4 (lower is better) Translates to: YHFRCYQHLIKLEIYQRSPCRGD*LLPYGL Trigger: TAGGCCGTACGGGAGCAGCCAGTCTCCGCGGCACGG...AGACCTTTGGTATATCTCCAACTTTATCAAGTGTTGATAACAGCGGAAATGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| CDS-3UTR CCA 90 bp | TATCATTTCCGCTGTTATCAACACTTGATAAAGTTGGAGATATACCAAAGGTCTCTCCTATCCCCGGGCTaGGGTACGGAGGAGTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: YHFRCYQHLIKLEIYQRSLLSPG*GTEELG Trigger: CCCCAACTCCTCCGTACCCCAGCCCGGGGATAGGAG...AGACCTTTGGTATATCTCCAACTTTATCAAGTGTTGATAACAGCGGAAATGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| CDS-3UTR CCA 90 bp | AAGTTGGAGATATACCAAAGGTCTGCTAATCATTATTCAAAGTCATCATCCTTGGGTCTGCTGCTGCCCTaGGGAGTAGCCGAACTGATG | + |
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Preference number: 4 (lower is better) Translates to: KLEIYQRSANHYSKSSSLGLLLP*GVAELM Trigger: CATCAGTTCGGCTACTCCCCAGGGCAGCAGCAGACC...CAAGGATGATGACTTTGAATAATGATTAGCAGACCTTTGGTATATCTCCAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| 3UTR CAA 72 bp | GTTGAAGGCTTGTCTGGTCACAGGGAAGTGATGAGATaGTCAGGGTATTTACTTCCTAAGTGGACTAATACC | + |
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Preference number: 4 (lower is better) Translates to: VEGLSGHREVMR*SGYLLPKWTNT Trigger: GGTATTAGTCCACTTAGGAAGTAAATACCCTGACAATCTCATCACTTCCCTGTGACCAGACAAGCCTTCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| CDS-3UTR TCA 90 bp | CATCATCCTTGGGTTCAACTCTTTTACACAAGTAAAAGTTCTGTCCAGGATGTTTTCTCTACCACGCCCTaGTCCAAATGGTGTAGATGT | + |
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Preference number: 4 (lower is better) Translates to: HHPWVQLFYTSKSSVQDVFSTTP*SKWCRC Trigger: ACATCTACACCATTTGGATCAGGGCGTGGTAGAGAA...AACATCCTGGACAGAACTTTTACTTGTGTAAAAGAGTTGAACCCAAGGATGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| CDS-3UTR GCA 90 bp | CTGCTAATCATTATTCAAAGTCATCATCCTTGGGTTCAACTCTTTTACACAAGTTTGCCTGTGAATGTTTaGGTATTGCTGTACTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: LLIIIQSHHPWVQLFYTSLPVNV*VLLYCW Trigger: CCAACAGTACAGCAATACGCAAACATTCACAGGCAA...ACTTGTGTAAAAGAGTTGAACCCAAGGATGATGACTTTGAATAATGATTAGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049744.4 ENSMUST00000221480.2 |
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| CDS-3UTR CCA 90 bp | TCTGCTAATCATTATTCAAAGTCATCATCCTTGGGTTCAACTCTTTTACACAAGGTATTGCTGTACTGTTaGCTTATATCCACTACAGAC | + |
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Preference number: 4 (lower is better) Translates to: SANHYSKSSSLGSTLLHKVLLYC*LISTTD Trigger: GTCTGTAGTGGATATAAGCCAACAGTACAGCAATAC...CTTGTGTAAAAGAGTTGAACCCAAGGATGATGACTTTGAATAATGATTAGCAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049744.4 ENSMUST00000221480.2 |
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| CDS-3UTR CCA 90 bp | CTGCTAATCATTATTCAAAGTCATCATCCTTGGGTTCAACTCTTTTACACAAGTGTATTGCTGTACTGTTaGCTTATATCCACTACAGAC | + |
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Preference number: 4 (lower is better) Translates to: LLIIIQSHHPWVQLFYTSVLLYC*LISTTD Trigger: GTCTGTAGTGGATATAAGCCAACAGTACAGCAATAC...ACTTGTGTAAAAGAGTTGAACCCAAGGATGATGACTTTGAATAATGATTAGCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049744.4 ENSMUST00000221480.2 |
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| CDS-3UTR TCA 90 bp | ATATACCAAAGGTCTGCTAATCATTATTCAAAGTCATCATCCTTGGGTTCAACTAGGGTCTTCAAGCATTaGAGGCTTAAAATAACTTTC | + |
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Preference number: 4 (lower is better) Translates to: IYQRSANHYSKSSSLGSTRVFKH*RLKITF Trigger: GAAAGTTATTTTAAGCCTTCAATGCTTGAAGACCCT...AGTTGAACCCAAGGATGATGACTTTGAATAATGATTAGCAGACCTTTGGTATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049744.4 ENSMUST00000221480.2 |
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| CDS-3UTR TCA 90 bp | TCTGCTAATCATTATTCAAAGTCATCATCCTTGGGTTCAACTCTTTTACACAAGAGGGTCTTCAAGCATTaGAGGCTTAAAATAACTTTC | + |
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Preference number: 4 (lower is better) Translates to: SANHYSKSSSLGSTLLHKRVFKH*RLKITF Trigger: GAAAGTTATTTTAAGCCTTCAATGCTTGAAGACCCT...CTTGTGTAAAAGAGTTGAACCCAAGGATGATGACTTTGAATAATGATTAGCAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049744.4 ENSMUST00000221480.2 |
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| 3UTR CAA 72 bp | TGTAAATTGTCCTATCATTTCCGCTGTTATCAACACTaGATAAAGTTGGAGATATACCAAAGGTCTGCTAAT | + |
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Preference number: 4 (lower is better) Translates to: CKLSYHFRCYQH*IKLEIYQRSAN Trigger: ATTAGCAGACCTTTGGTATATCTCCAACTTTATCAAGTGTTGATAACAGCGGAAATGATAGGACAATTTACA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049744.4 ENSMUST00000221480.2 |
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| 3UTR CAA 72 bp | TATGATACACACTCCCAGATAGCTAAATACTGTAAATaGTCCTATCATTTCCGCTGTTATCAACACTTGATA | + |
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Preference number: 4 (lower is better) Translates to: YDTHSQIAKYCK*SYHFRCYQHLI Trigger: TATCAAGTGTTGATAACAGCGGAAATGATAGGACAATTTACAGTATTTAGCTATCTGGGAGTGTGTATCATA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049744.4 ENSMUST00000221480.2 |
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| CDS CCA 90 bp | TGGCTGCTCCCGTACGGCCTAGCCCGGGGCCCGCAGGGCGGAGTGTaGTGCGGACTCCCGTACCCGTCCCGCGGGGAGGGCGGCCGCGGC | + |
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Preference number: 5 (lower is better) Translates to: WLLPYGLARGPQGGV*CGLPYPSRGEGGRG Trigger: GCCGCGGCCGCCCTCCCCGCGGGACGGGTACGGGAGTCCGCACCACACTCCGCCCTGCGGGCCCCGGGCTAGGCCGTACGGGAGCAGCCA 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| CDS CCA 90 bp | GACCCGAAGCGGGCCCCCGAGAAGTTGCCGCCGTGCCGCGGAGACTaGCTGCTCCCGTACGGCCTAGCCCGGGGCCCGCAGGGCGGAGTG | + |
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Preference number: 5 (lower is better) Translates to: DPKRAPEKLPPCRGD*LLPYGLARGPQGGV Trigger: CACTCCGCCCTGCGGGCCCCGGGCTAGGCCGTACGGGAGCAGCCAGTCTCCGCGGCACGGCGGCAACTTCTCGGGGGCCCGCTTCGGGTC 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| CDS-3UTR CAA 90 bp | TCCTTCCAGTGGGTCCCCACCCCAATAACAAATAGTTATGGCTTACCTAGGTGGTTTGCCTGTGAATGTTaGCGTATTGCTGTACTGTTG | + |
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Preference number: 5 (lower is better) Translates to: SFQWVPTPITNSYGLPRWFACEC*RIAVLL Trigger: CAACAGTACAGCAATACGCAAACATTCACAGGCAAA...CCACCTAGGTAAGCCATAACTATTTGTTATTGGGGTGGGGACCCACTGGAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| CDS-3UTR CAA 90 bp | TCTGCTAATCATTATTCAAAGTCATCATCCTTGGGTTCAACTCTTTTACACAAGCGTATTGCTGTACTGTaGGCTTATATCCACTACAGA | + |
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Preference number: 5 (lower is better) Translates to: SANHYSKSSSLGSTLLHKRIAVL*AYIHYR Trigger: TCTGTAGTGGATATAAGCCAACAGTACAGCAATACG...CTTGTGTAAAAGAGTTGAACCCAAGGATGATGACTTTGAATAATGATTAGCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049744.4 ENSMUST00000221480.2 |
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| CDS-3UTR CAA 90 bp | CTGCTAATCATTATTCAAAGTCATCATCCTTGGGTTCAACTCTTTTACACAAGTTTTGCCTGTGAATGTTaGCGTATTGCTGTACTGTTG | + |
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Preference number: 5 (lower is better) Translates to: LLIIIQSHHPWVQLFYTSFACEC*RIAVLL Trigger: CAACAGTACAGCAATACGCAAACATTCACAGGCAAA...ACTTGTGTAAAAGAGTTGAACCCAAGGATGATGACTTTGAATAATGATTAGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049744.4 ENSMUST00000221480.2 |
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| CDS-3UTR CAA 90 bp | CTGCTAATCATTATTCAAAGTCATCATCCTTGGGTTCAACTCTTTTACACAAGTGTGAATGTTTGCGTATaGCTGTACTGTTGGCTTATA | + |
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Preference number: 5 (lower is better) Translates to: LLIIIQSHHPWVQLFYTSVNVCV*LYCWLI Trigger: TATAAGCCAACAGTACAGCAATACGCAAACATTCAC...ACTTGTGTAAAAGAGTTGAACCCAAGGATGATGACTTTGAATAATGATTAGCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049744.4 ENSMUST00000221480.2 |
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| CDS-3UTR CAA 90 bp | ATATACCAAAGGTCTGCTAATCATTATTCAAAGTCATCATCCTTGGGTTCAACTGTGAATGTTTGCGTATaGCTGTACTGTTGGCTTATA | + |
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Preference number: 5 (lower is better) Translates to: IYQRSANHYSKSSSLGSTVNVCV*LYCWLI Trigger: TATAAGCCAACAGTACAGCAATACGCAAACATTCAC...AGTTGAACCCAAGGATGATGACTTTGAATAATGATTAGCAGACCTTTGGTATAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049744.4 ENSMUST00000221480.2 |
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| CDS-3UTR CAA 90 bp | ATATACCAAAGGTCTGCTAATCATTATTCAAAGTCATCATCCTTGGGTTCAACTAAGTATCTTCCTTTTTaGCCTGTGAATGTTTGCGTA | + |
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Preference number: 5 (lower is better) Translates to: IYQRSANHYSKSSSLGSTKYLPF*PVNVCV Trigger: TACGCAAACATTCACAGGCAAAAAAGGAAGATACTT...AGTTGAACCCAAGGATGATGACTTTGAATAATGATTAGCAGACCTTTGGTATAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049744.4 ENSMUST00000221480.2 |
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| CDS-3UTR CAA 90 bp | TATCATTTCCGCTGTTATCAACACTTGATAAAGTTGGAGATATACCAAAGGTCTAAGTATCTTCCTTTTTaGCCTGTGAATGTTTGCGTA | + |
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Preference number: 5 (lower is better) Translates to: YHFRCYQHLIKLEIYQRSKYLPF*PVNVCV Trigger: TACGCAAACATTCACAGGCAAAAAAGGAAGATACTT...AGACCTTTGGTATATCTCCAACTTTATCAAGTGTTGATAACAGCGGAAATGATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049744.4 ENSMUST00000221480.2 |
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| CDS GCA 72 bp | TACGGCCTAGCCCGGGGCCCGCAGGGCGGAGTGTGGTaGGGACTCCCGTACCCGTCCCGCGGGGAGGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: YGLARGPQGGVW*GLPYPSRGEGG Trigger: GCCGCCCTCCCCGCGGGACGGGTACGGGAGTCCGCACCACACTCCGCCCTGCGGGCCCCGGGCTAGGCCGTA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| CDS CCA 72 bp | CCGTACGGCCTAGCCCGGGGCCCGCAGGGCGGAGTGTaGTGCGGACTCCCGTACCCGTCCCGCGGGGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: PYGLARGPQGGV*CGLPYPSRGEG Trigger: GCCCTCCCCGCGGGACGGGTACGGGAGTCCGCACCACACTCCGCCCTGCGGGCCCCGGGCTAGGCCGTACGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| CDS CCA 72 bp | CGGGCCCCCGAGAAGTTGCCGCCGTGCCGCGGAGACTaGCTGCTCCCGTACGGCCTAGCCCGGGGCCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: RAPEKLPPCRGD*LLPYGLARGPQ Trigger: CTGCGGGCCCCGGGCTAGGCCGTACGGGAGCAGCCAGTCTCCGCGGCACGGCGGCAACTTCTCGGGGGCCCG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| CDS GCA 72 bp | CCGGGGACGGAGACCCGAAGCGGGCCCCCGAGAAGTTaGCGCCGTGCCGCGGAGACTGGCTGCTCCCGTACG | + |
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Preference number: 6 (lower is better) Translates to: PGTETRSGPPRS*RRAAETGCSRT Trigger: CGTACGGGAGCAGCCAGTCTCCGCGGCACGGCGGCAACTTCTCGGGGGCCCGCTTCGGGTCTCCGTCCCCGG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| CDS CAA 72 bp | CCCGGGGACGGAGACCCGAAGCGGGCCCCCGAGAAGTaGCCGCCGTGCCGCGGAGACTGGCTGCTCCCGTAC | + |
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Preference number: 6 (lower is better) Translates to: PGDGDPKRAPEK*PPCRGDWLLPY Trigger: GTACGGGAGCAGCCAGTCTCCGCGGCACGGCGGCAACTTCTCGGGGGCCCGCTTCGGGTCTCCGTCCCCGGG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| CDS CCA 72 bp | CCTTGGAGAACCCTGGGGGTAGGTCTGCTGCTGCCCTaGGGAGTAGCCGAACTGATGCTGGGACCCCGCGGG | + |
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Preference number: 6 (lower is better) Translates to: PWRTLGVGLLLP*GVAELMLGPRG Trigger: CCCGCGGGGTCCCAGCATCAGTTCGGCTACTCCCCAGGGCAGCAGCAGACCTACCCCCAGGGTTCTCCAAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049744.4 |
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| CDS CCA 72 bp | TTTTTGCCTGTGAATGTTTGCGTATTGCTGTACTGTTaGCTTATATCCACTACAGACACTGGTTCTAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: FLPVNVCVLLYC*LISTTDTGSRP Trigger: TGGCCTAGAACCAGTGTCTGTAGTGGATATAAGCCAACAGTACAGCAATACGCAAACATTCACAGGCAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049744.4 ENSMUST00000221480.2 |
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