Pregenerated sensors for MPIG6B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073414Ensembl transcript IDs: ENSMUST00000097337.8, ENSMUST00000174190.2
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAATGTTATCTGGTGGTAGGACATCACTGGCAACCTTTCAGTGGATaGGCAGCAGCAGCAGCCAATGAGCAGGGGGAGTGCAGTCAGACC | + |
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Preference number: 1 (lower is better) Translates to: ECYLVVGHHWQPFSG*AAAAANEQGECSQT Trigger: GGTCTGACTGCACTCCCCCTGCTCATTGGCTGCTGCTGCTGCTCATCCACTGAAAGGTTGCCAGTGATGTCCTACCACCAGATAACATTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR GCA 90 bp | TGGTGGCAGCATTGGACATGGAGAAAGGTACAGAGGACAGTGACCTaGTACAGACAAGGCCTTGTGTGGTTGGTGGTGCATGCTTGCAAT | + |
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Preference number: 1 (lower is better) Translates to: WWQHWTWRKVQRTVT*YRQGLVWLVVHACN Trigger: ATTGCAAGCATGCACCACCAACCACACAAGGCCTTGTCTGTAGCAGGTCACTGTCCTCTGTACCTTTCTCCATGTCCAATGCTGCCACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR CCA 90 bp | AGTCCTTGTGTGGGAGAGGAGATGGTGTACTCTGACCCCAGTTTCTaGCTTGGACAACTTGGGTTCTTCAAGAGCTTTCAGAGGAGGACC | + |
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Preference number: 1 (lower is better) Translates to: SPCVGEEMVYSDPSF*LGQLGFFKSFQRRT Trigger: GGTCCTCCTCTGAAAGCTCTTGAAGAACCCAAGTTGTCCAAGCCAGAAACTGGGGTCAGAGTACACCATCTCCTCTCCCACACAAGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR CCA 90 bp | GTTGGGAGGCAGAAGCAGATGAATTCTCTGAGTTCAAGGCCAGCTTaGTCTATGGTCTACGGAGTTCCAAGACAGCCAAGGCTATACAGA | + |
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Preference number: 1 (lower is better) Translates to: VGRQKQMNSLSSRPA*SMVYGVPRQPRLYR Trigger: TCTGTATAGCCTTGGCTGTCTTGGAACTCCGTAGACCATAGACCAAGCTGGCCTTGAACTCAGAGAATTCATCTGCTTCTGCCTCCCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR CCA 90 bp | GAGGGGTCTGTGGGTCATCATGAAGCAAATGATGACAGTACATTCTaGTGGCAGCATTGGACATGGAGAAAGGTACAGAGGACAGTGACC | + |
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Preference number: 1 (lower is better) Translates to: EGSVGHHEANDDSTF*WQHWTWRKVQRTVT Trigger: GGTCACTGTCCTCTGTACCTTTCTCCATGTCCAATGCTGCCACCAGAATGTACTGTCATCATTTGCTTCATGATGACCCACAGACCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR CCA 90 bp | TTGAAATGCTTCATTGGGCCAGGCAGTGCCTTTAAACTCAGAAGTTaGGAGGCAGAAGCAGATGAATTCTCTGAGTTCAAGGCCAGCTTG | + |
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Preference number: 1 (lower is better) Translates to: LKCFIGPGSAFKLRS*EAEADEFSEFKASL Trigger: CAAGCTGGCCTTGAACTCAGAGAATTCATCTGCTTCTGCCTCCCAACTTCTGAGTTTAAAGGCACTGCCTGGCCCAATGAAGCATTTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR CCA 90 bp | CATGAAGCAAATGATGACAGTACATTCTGGTGGCAGCATTGGACATaGAGAAAGGTACAGAGGACAGTGACCTGCTACAGACAAGGCCTT | + |
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Preference number: 1 (lower is better) Translates to: HEANDDSTFWWQHWT*RKVQRTVTCYRQGL Trigger: AAGGCCTTGTCTGTAGCAGGTCACTGTCCTCTGTACCTTTCTCCATGTCCAATGCTGCCACCAGAATGTACTGTCATCATTTGCTTCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR TCA 90 bp | ATCTGGCTTGGAAGGACTACTGTGTATCATTTGGGGGCTGAAGATTaGTTGGCCAGCTTCCTAGAAGAGTACGGAGGAGAAACAAAGAGA | + |
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Preference number: 1 (lower is better) Translates to: IWLGRTTVYHLGAED*LASFLEEYGGETKR Trigger: TCTCTTTGTTTCTCCTCCGTACTCTTCTAGGAAGCTGGCCAATCAATCTTCAGCCCCCAAATGATACACAGTAGTCCTTCCAAGCCAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR CAA 90 bp | GAGCCTGAACACAGAGCCCACGCTCACAGCCCCAGAGCTGAAACCTaGGGAAAGAACCAGTGGTTGATCCTGGGAATCTTGCTGGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: EPEHRAHAHSPRAET*GKNQWLILGILLAL Trigger: CAAAGCCAGCAAGATTCCCAGGATCAACCACTGGTTCTTTCCCAAGGTTTCAGCTCTGGGGCTGTGAGCGTGGGCTCTGTGTTCAGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR-3UTR CCA 90 bp | TTGCTGGCTTTGAGTAGGAAGAGCAGGGCACGAGGATCAGAGGGGTCTGTGGGTAGACAAGGCCTTGTGTaGTTGGTGGTGCATGCTTGC | + |
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Preference number: 2 (lower is better) Translates to: LLALSRKSRARGSEGSVGRQGLV*LVVHAC Trigger: GCAAGCATGCACCACCAACCACACAAGGCCTTGTCT...ACCCACAGACCCCTCTGATCCTCGTGCCCTGCTCTTCCTACTCAAAGCCAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR CAA 90 bp | ACCTTGGGAAAGAACCAGTGGTTGATCCTGGGAATCTTGCTGGCTTaGAGTAGGAAGAGCAGGGCACGAGGATCAGAGGGGTCTGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: TLGKNQWLILGILLA*SRKSRARGSEGSVG Trigger: ACCCACAGACCCCTCTGATCCTCGTGCCCTGCTCTTCCTACTCAAAGCCAGCAAGATTCCCAGGATCAACCACTGGTTCTTTCCCAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR CAA 90 bp | CACGCTCACAGCCCCAGAGCTGAAACCTTGGGAAAGAACCAGTGGTaGATCCTGGGAATCTTGCTGGCTTTGAGTAGGAAGAGCAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: HAHSPRAETLGKNQW*ILGILLALSRKSRA Trigger: TGCCCTGCTCTTCCTACTCAAAGCCAGCAAGATTCCCAGGATCAACCACTGGTTCTTTCCCAAGGTTTCAGCTCTGGGGCTGTGAGCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGGTACAGAGGACAGTGACCTGCTACAGACAAGGCCTTGTGTGGTTGGTGGTCAGTGCCTCTGTCCATaGTGCCTGCCCCTTCTAGCT | + |
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Preference number: 2 (lower is better) Translates to: KGTEDSDLLQTRPCVVGGQCLCP*CLPLLA Trigger: AGCTAGAAGGGGCAGGCACCATGGACAGAGGCACTG...ACCACCAACCACACAAGGCCTTGTCTGTAGCAGGTCACTGTCCTCTGTACCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR CAA 90 bp | CTTGTGTGGGAGAGGAGATGGTGTACTCTGACCCCAGTTTCTGGCTaGGACAACTTGGGTTCTTCAAGAGCTTTCAGAGGAGGACCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LVWERRWCTLTPVSG*DNLGSSRAFRGGPR Trigger: CCTGGGTCCTCCTCTGAAAGCTCTTGAAGAACCCAAGTTGTCCAAGCCAGAAACTGGGGTCAGAGTACACCATCTCCTCTCCCACACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR CAA 90 bp | AGAGCTGAAACCTTGGGAAAGAACCAGTGGTTGATCCTGGGAATCTaGCTGGCTTTGAGTAGGAAGAGCAGGGCACGAGGATCAGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: RAETLGKNQWLILGI*LALSRKSRARGSEG Trigger: CCCCTCTGATCCTCGTGCCCTGCTCTTCCTACTCAAAGCCAGCAAGATTCCCAGGATCAACCACTGGTTCTTTCCCAAGGTTTCAGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR-3UTR TCA 90 bp | CCCAGAGCTGAAACCTTGGGAAAGAACCAGTGGTTGATCCTGGGAATCTTGCTGGGAGATGGTGTACTCTaGCCCCAGTTTCTGGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: PRAETLGKNQWLILGILLGDGVL*PQFLAW Trigger: CCAAGCCAGAAACTGGGGTCAGAGTACACCATCTCC...CAGCAAGATTCCCAGGATCAACCACTGGTTCTTTCCCAAGGTTTCAGCTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAGATGGTGTACTCTGACCCCAGTTTCTGGCTTGGACAACTTGGGTTCTTCACTGGCAACCTTTCAGTaGATGAGCAGCAGCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: RRWCTLTPVSGLDNLGSSLATFQ*MSSSSS Trigger: GCTGCTGCTGCTGCTCATCCACTGAAAGGTTGCCAG...TGAAGAACCCAAGTTGTCCAAGCCAGAAACTGGGGTCAGAGTACACCATCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCTTGGACAACTTGGGTTCTTCAAGAGCTTTCAGAGGAGGACCCAGGGGATGAGGTTTGACAAGCCTTaGGCAAAATGCCTGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: WLGQLGFFKSFQRRTQGMRFDKP*AKCLRP Trigger: TGGCCTCAGGCATTTTGCCCAAGGCTTGTCAAACCT...CATCCCCTGGGTCCTCCTCTGAAAGCTCTTGAAGAACCCAAGTTGTCCAAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR-3UTR TCA 90 bp | AGGAGATGGTGTACTCTGACCCCAGTTTCTGGCTTGGACAACTTGGGTTCTTCACAACCTTTCAGTGGATaGGCAGCAGCAGCAGCCAAT | + |
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Preference number: 2 (lower is better) Translates to: RRWCTLTPVSGLDNLGSSQPFSG*AAAAAN Trigger: ATTGGCTGCTGCTGCTGCTCATCCACTGAAAGGTTG...TGAAGAACCCAAGTTGTCCAAGCCAGAAACTGGGGTCAGAGTACACCATCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR CAA 90 bp | AGTTGGGAGGCAGAAGCAGATGAATTCTCTGAGTTCAAGGCCAGCTaGGTCTATGGTCTACGGAGTTCCAAGACAGCCAAGGCTATACAG | + |
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Preference number: 2 (lower is better) Translates to: SWEAEADEFSEFKAS*VYGLRSSKTAKAIQ Trigger: CTGTATAGCCTTGGCTGTCTTGGAACTCCGTAGACCATAGACCAAGCTGGCCTTGAACTCAGAGAATTCATCTGCTTCTGCCTCCCAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR-3UTR CCA 90 bp | TTGCTGGCTTTGAGTAGGAAGAGCAGGGCACGAGGATCAGAGGGGTCTGTGGGTTTTAAACTCAGAAGTTaGGAGGCAGAAGCAGATGAA | + |
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Preference number: 2 (lower is better) Translates to: LLALSRKSRARGSEGSVGFKLRS*EAEADE Trigger: TTCATCTGCTTCTGCCTCCCAACTTCTGAGTTTAAA...ACCCACAGACCCCTCTGATCCTCGTGCCCTGCTCTTCCTACTCAAAGCCAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAGAGCTGAAACCTTGGGAAAGAACCAGTGGTTGATCCTGGGAATCTTGCTGGACAGTACATTCTGGTaGCAGCATTGGACATGGAGA | + |
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Preference number: 2 (lower is better) Translates to: PRAETLGKNQWLILGILLDSTFW*QHWTWR Trigger: TCTCCATGTCCAATGCTGCCACCAGAATGTACTGTC...CAGCAAGATTCCCAGGATCAACCACTGGTTCTTTCCCAAGGTTTCAGCTCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGCTACAGACAAGGCCTTGTGTGGTTGGTGGTGCATGCTTGCAATCACTTTTCCCCAGTTTCTGGCTTaGACAACTTGGGTTCTTCAA | + |
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Preference number: 2 (lower is better) Translates to: PATDKALCGWWCMLAITFPQFLA*TTWVLQ Trigger: TTGAAGAACCCAAGTTGTCCAAGCCAGAAACTGGGG...AAAAGTGATTGCAAGCATGCACCACCAACCACACAAGGCCTTGTCTGTAGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR-3UTR TCA 90 bp | AGGAGATGGTGTACTCTGACCCCAGTTTCTGGCTTGGACAACTTGGGTTCTTCAGGAGAAACAAAGAGATaGGCAGAACAGTGCTACTAC | + |
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Preference number: 2 (lower is better) Translates to: RRWCTLTPVSGLDNLGSSGETKR*AEQCYY Trigger: GTAGTAGCACTGTTCTGCTCATCTCTTTGTTTCTCC...TGAAGAACCCAAGTTGTCCAAGCCAGAAACTGGGGTCAGAGTACACCATCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGGTCCAAGGCTGAACTCATACTTCCTGATATTTTCTTATAAACTGACAGACAGTCGCCTCTATCAGTaGCTCTGTCCATGGTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: PGPRLNSYFLIFSYKLTDSRLYQ*LCPWCL Trigger: CAGGCACCATGGACAGAGGCACTGATAGAGGCGACT...GTCTGTCAGTTTATAAGAAAATATCAGGAAGTATGAGTTCAGCCTTGGACCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCAAATGATGACAGTACATTCTGGTGGCAGCATTGGACATGGAGAAAGGTACTCTGACCCCAGTTTCTaGCTTGGACAACTTGGGTTC | + |
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Preference number: 2 (lower is better) Translates to: KQMMTVHSGGSIGHGERYSDPSF*LGQLGF Trigger: GAACCCAAGTTGTCCAAGCCAGAAACTGGGGTCAGA...GTACCTTTCTCCATGTCCAATGCTGCCACCAGAATGTACTGTCATCATTTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGGTCCAAGGCTGAACTCATACTTCCTGATATTTTCTTATAAACTGACAGACGCCATCTGGACAGAGTaGACTAGGTCTGAGATCTGG | + |
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Preference number: 2 (lower is better) Translates to: PGPRLNSYFLIFSYKLTDAIWTE*TRSEIW Trigger: CCAGATCTCAGACCTAGTTCACTCTGTCCAGATGGC...GTCTGTCAGTTTATAAGAAAATATCAGGAAGTATGAGTTCAGCCTTGGACCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAATTTATTTCAAAGAGCCAACGAGTATTGTAGGGAGAACATTGTGGAGAAATGCCTCTGTCCATGGTaGCTGCCCCTTCTAGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: QNLFQRANEYCRENIVEKCLCPW*LPLLAE Trigger: CTCAGCTAGAAGGGGCAGGCACCATGGACAGAGGCA...TTTCTCCACAATGTTCTCCCTACAATACTCGTTGGCTCTTTGAAATAAATTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCAAATGATGACAGTACATTCTGGTGGCAGCATTGGACATGGAGAAAGGTACTGGTTTAAACAGGGGTaGATGTTATCTGGTGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: KQMMTVHSGGSIGHGERYWFKQG*MLSGGR Trigger: CCTACCACCAGATAACATTCACCCCTGTTTAAACCA...GTACCTTTCTCCATGTCCAATGCTGCCACCAGAATGTACTGTCATCATTTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAAAGTCTGCCTTTATTTGATAAAGAAGAAAGGGATGTTTTCCAGGACGCTCCCAGATAGAAAGGGTTaGCAGAACAAGGGCTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: FKVCLYLIKKKGMFSRTLPDRKG*QNKGFP Trigger: AGGGAAGCCCTTGTTCTGCCAACCCTTTCTATCTGG...GAGCGTCCTGGAAAACATCCCTTTCTTCTTTATCAAATAAAGGCAGACTTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCAAATGATGACAGTACATTCTGGTGGCAGCATTGGACATGGAGAAAGGTACTTGGTGGTGCATGCTTaGAATCACTTTTATCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: KQMMTVHSGGSIGHGERYLVVHA*NHFYPN Trigger: GTTTGGATAAAAGTGATTGCAAGCATGCACCACCAA...GTACCTTTCTCCATGTCCAATGCTGCCACCAGAATGTACTGTCATCATTTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAAAGTCTGCCTTTATTTGATAAAGAAGAAAGGGATGTTTTCCAGGACGCTCCTGGCTTGGACAACTTaGGTTCTTCAAGAGCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: FKVCLYLIKKKGMFSRTLLAWTT*VLQELS Trigger: TGAAAGCTCTTGAAGAACCCAAGTTGTCCAAGCCAG...GAGCGTCCTGGAAAACATCCCTTTCTTCTTTATCAAATAAAGGCAGACTTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAATTTATTTCAAAGAGCCAACGAGTATTGTAGGGAGAACATTGTGGAGAAATTGTGTGGTTGGTGGTaGATGCTTGCAATCACTTTT | + |
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Preference number: 2 (lower is better) Translates to: QNLFQRANEYCRENIVEKLCGWW*MLAITF Trigger: AAAAGTGATTGCAAGCATGCACCACCAACCACACAA...TTTCTCCACAATGTTCTCCCTACAATACTCGTTGGCTCTTTGAAATAAATTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR TCA 72 bp | CTGGTGGTAGGACATCACTGGCAACCTTTCAGTGGATaGGCAGCAGCAGCAGCCAATGAGCAGGGGGAGTGC | + |
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Preference number: 3 (lower is better) Translates to: LVVGHHWQPFSG*AAAAANEQGEC Trigger: GCACTCCCCCTGCTCATTGGCTGCTGCTGCTGCTCATCCACTGAAAGGTTGCCAGTGATGTCCTACCACCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR GCA 72 bp | GTAGTCAGTCGCCTCTATCAGTGCCTCTGTCCATGGTaGCTGCCCCTTCTAGCTGAGGTTATACAGGGGAGC | + |
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Preference number: 3 (lower is better) Translates to: VVSRLYQCLCPW*LPLLAEVIQGS Trigger: GCTCCCCTGTATAACCTCAGCTAGAAGGGGCAGGCACCATGGACAGAGGCACTGATAGAGGCGACTGACTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR GCA 72 bp | CAGAACGCAAACCAGGTAGTCAGTCGCCTCTATCAGTaGCTCTGTCCATGGTGCCTGCCCCTTCTAGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: QNANQVVSRLYQ*LCPWCLPLLAE Trigger: CTCAGCTAGAAGGGGCAGGCACCATGGACAGAGGCACTGATAGAGGCGACTGACTACCTGGTTTGCGTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR CCA 72 bp | CAGGTAGTCAGTCGCCTCTATCAGTGCCTCTGTCCATaGTGCCTGCCCCTTCTAGCTGAGGTTATACAGGGG | + |
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Preference number: 3 (lower is better) Translates to: QVVSRLYQCLCP*CLPLLAEVIQG Trigger: CCCCTGTATAACCTCAGCTAGAAGGGGCAGGCACCATGGACAGAGGCACTGATAGAGGCGACTGACTACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR TCA 72 bp | GGCAGCATTGGACATGGAGAAAGGTACAGAGGACAGTaGCCTGCTACAGACAAGGCCTTGTGTGGTTGGTGG | + |
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Preference number: 3 (lower is better) Translates to: GSIGHGERYRGQ*PATDKALCGWW Trigger: CCACCAACCACACAAGGCCTTGTCTGTAGCAGGTCACTGTCCTCTGTACCTTTCTCCATGTCCAATGCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR TCA 72 bp | GCCTTGGGCAAAATGCCTGAGGCCATCTGGACAGAGTaGACTAGGTCTGAGATCTGGCTTGGAAGGACTACT | + |
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Preference number: 3 (lower is better) Translates to: ALGKMPEAIWTE*TRSEIWLGRTT Trigger: AGTAGTCCTTCCAAGCCAGATCTCAGACCTAGTTCACTCTGTCCAGATGGCCTCAGGCATTTTGCCCAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR CCA 72 bp | CACAGCCCCAGAGCTGAAACCTTGGGAAAGAACCAGTaGTTGATCCTGGGAATCTTGCTGGCTTTGAGTAGG | + |
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Preference number: 3 (lower is better) Translates to: HSPRAETLGKNQ*LILGILLALSR Trigger: CCTACTCAAAGCCAGCAAGATTCCCAGGATCAACCACTGGTTCTTTCCCAAGGTTTCAGCTCTGGGGCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR-3UTR CAA 90 bp | TTGCTGGCTTTGAGTAGGAAGAGCAGGGCACGAGGATCAGAGGGGTCTGTGGGTGTTGGTGGTGCATGCTaGCAATCACTTTTATCCAAA | + |
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Preference number: 3 (lower is better) Translates to: LLALSRKSRARGSEGSVGVGGAC*QSLLSK Trigger: TTTGGATAAAAGTGATTGCAAGCATGCACCACCAAC...ACCCACAGACCCCTCTGATCCTCGTGCCCTGCTCTTCCTACTCAAAGCCAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR GCA 72 bp | CATTGGACATGGAGAAAGGTACAGAGGACAGTGACCTaGTACAGACAAGGCCTTGTGTGGTTGGTGGTGCAT | + |
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Preference number: 3 (lower is better) Translates to: HWTWRKVQRTVT*YRQGLVWLVVH Trigger: ATGCACCACCAACCACACAAGGCCTTGTCTGTAGCAGGTCACTGTCCTCTGTACCTTTCTCCATGTCCAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR-3UTR CAA 90 bp | CCTGCTACAGACAAGGCCTTGTGTGGTTGGTGGTGCATGCTTGCAATCACTTTTACCCCAGTTTCTGGCTaGGACAACTTGGGTTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: PATDKALCGWWCMLAITFTPVSG*DNLGSS Trigger: TGAAGAACCCAAGTTGTCCAAGCCAGAAACTGGGGT...AAAAGTGATTGCAAGCATGCACCACCAACCACACAAGGCCTTGTCTGTAGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR TCA 72 bp | GATAAGTCCTTGTGTGGGAGAGGAGATGGTGTACTCTaGCCCCAGTTTCTGGCTTGGACAACTTGGGTTCTT | + |
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Preference number: 3 (lower is better) Translates to: DKSLCGRGDGVL*PQFLAWTTWVL Trigger: AAGAACCCAAGTTGTCCAAGCCAGAAACTGGGGTCAGAGTACACCATCTCCTCTCCCACACAAGGACTTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR CCA 72 bp | CAGAAGCAGATGAATTCTCTGAGTTCAAGGCCAGCTTaGTCTATGGTCTACGGAGTTCCAAGACAGCCAAGG | + |
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Preference number: 3 (lower is better) Translates to: QKQMNSLSSRPA*SMVYGVPRQPR Trigger: CCTTGGCTGTCTTGGAACTCCGTAGACCATAGACCAAGCTGGCCTTGAACTCAGAGAATTCATCTGCTTCTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR CCA 72 bp | CAGAGGACAGTGACCTGCTACAGACAAGGCCTTGTGTaGTTGGTGGTGCATGCTTGCAATCACTTTTATCCA | + |
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Preference number: 3 (lower is better) Translates to: QRTVTCYRQGLV*LVVHACNHFYP Trigger: TGGATAAAAGTGATTGCAAGCATGCACCACCAACCACACAAGGCCTTGTCTGTAGCAGGTCACTGTCCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR CCA 72 bp | GTAGGAAGAGCAGGGCACGAGGATCAGAGGGGTCTGTaGGTCATCATGAAGCAAATGATGACAGTACATTCT | + |
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Preference number: 3 (lower is better) Translates to: VGRAGHEDQRGL*VIMKQMMTVHS Trigger: AGAATGTACTGTCATCATTTGCTTCATGATGACCCACAGACCCCTCTGATCCTCGTGCCCTGCTCTTCCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR TCA 72 bp | GGAAGGACTACTGTGTATCATTTGGGGGCTGAAGATTaGTTGGCCAGCTTCCTAGAAGAGTACGGAGGAGAA | + |
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Preference number: 3 (lower is better) Translates to: GRTTVYHLGAED*LASFLEEYGGE Trigger: TTCTCCTCCGTACTCTTCTAGGAAGCTGGCCAATCAATCTTCAGCCCCCAAATGATACACAGTAGTCCTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR-3UTR CAA 90 bp | AATTCTCTGAGTTCAAGGCCAGCTTGGTCTATGGTCTACGGAGTTCCAAGACAGAGCTTAACAGGCAGCTaGATCATCTTTAGAGAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: NSLSSRPAWSMVYGVPRQSLTGS*IIFREG Trigger: GCCCTCTCTAAAGATGATCAAGCTGCCTGTTAAGCT...CTGTCTTGGAACTCCGTAGACCATAGACCAAGCTGGCCTTGAACTCAGAGAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR-3UTR CAA 90 bp | AAGCAAATGATGACAGTACATTCTGGTGGCAGCATTGGACATGGAGAAAGGTACGGTCTGAGATCTGGCTaGGAAGGACTACTGTGTATC | + |
|
Preference number: 3 (lower is better) Translates to: KQMMTVHSGGSIGHGERYGLRSG*EGLLCI Trigger: GATACACAGTAGTCCTTCCAAGCCAGATCTCAGACC...GTACCTTTCTCCATGTCCAATGCTGCCACCAGAATGTACTGTCATCATTTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR CCA 72 bp | TTCATTGGGCCAGGCAGTGCCTTTAAACTCAGAAGTTaGGAGGCAGAAGCAGATGAATTCTCTGAGTTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: FIGPGSAFKLRS*EAEADEFSEFK Trigger: CTTGAACTCAGAGAATTCATCTGCTTCTGCCTCCCAACTTCTGAGTTTAAAGGCACTGCCTGGCCCAATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR CCA 72 bp | AATGATGACAGTACATTCTGGTGGCAGCATTGGACATaGAGAAAGGTACAGAGGACAGTGACCTGCTACAGA | + |
|
Preference number: 3 (lower is better) Translates to: NDDSTFWWQHWT*RKVQRTVTCYR Trigger: TCTGTAGCAGGTCACTGTCCTCTGTACCTTTCTCCATGTCCAATGCTGCCACCAGAATGTACTGTCATCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR CCA 72 bp | GTGGGTCATCATGAAGCAAATGATGACAGTACATTCTaGTGGCAGCATTGGACATGGAGAAAGGTACAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: VGHHEANDDSTF*WQHWTWRKVQR Trigger: CCTCTGTACCTTTCTCCATGTCCAATGCTGCCACCAGAATGTACTGTCATCATTTGCTTCATGATGACCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR CCA 72 bp | GGTCATCATGAAGCAAATGATGACAGTACATTCTGGTaGCAGCATTGGACATGGAGAAAGGTACAGAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: GHHEANDDSTFW*QHWTWRKVQRT Trigger: TGTCCTCTGTACCTTTCTCCATGTCCAATGCTGCCACCAGAATGTACTGTCATCATTTGCTTCATGATGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR CCA 72 bp | TTCAAAGAGCCAACGAGTATTGTAGGGAGAACATTGTaGAGAAACTCTCTGAGGGCGTGTGCACACAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: FKEPTSIVGRTL*RNSLRACAHRK Trigger: TTTTCTGTGTGCACACGCCCTCAGAGAGTTTCTCCACAATGTTCTCCCTACAATACTCGTTGGCTCTTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR GCA 72 bp | TACAGACAAGGCCTTGTGTGGTTGGTGGTGCATGCTTaGAATCACTTTTATCCAAACACTGAAGGTAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: YRQGLVWLVVHA*NHFYPNTEGRH Trigger: ATGTCTACCTTCAGTGTTTGGATAAAAGTGATTGCAAGCATGCACCACCAACCACACAAGGCCTTGTCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR-3UTR CAA 90 bp | TTCAAAGTCTGCCTTTATTTGATAAAGAAGAAAGGGATGTTTTCCAGGACGCTCGGAAAGAACCAGTGGTaGATCCTGGGAATCTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: FKVCLYLIKKKGMFSRTLGKNQW*ILGILL Trigger: CAGCAAGATTCCCAGGATCAACCACTGGTTCTTTCC...GAGCGTCCTGGAAAACATCCCTTTCTTCTTTATCAAATAAAGGCAGACTTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR TCA 72 bp | AGCTTCCTAGAAGAGTACGGAGGAGAAACAAAGAGATaGGCAGAACAGTGCTACTACAAAGACAATAGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: SFLEEYGGETKR*AEQCYYKDNSN Trigger: GTTGCTATTGTCTTTGTAGTAGCACTGTTCTGCTCATCTCTTTGTTTCTCCTCCGTACTCTTCTAGGAAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR CCA 72 bp | AAAGAAGAAAGGGATGTTTTCCAGGACGCTCATTCCTaGTCCAAGGCTGAACTCATACTTCCTGATATTTTC | + |
|
Preference number: 3 (lower is better) Translates to: KEERDVFQDAHS*SKAELILPDIF Trigger: GAAAATATCAGGAAGTATGAGTTCAGCCTTGGACCAGGAATGAGCGTCCTGGAAAACATCCCTTTCTTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR CAA 72 bp | CACAGAGCCCACGCTCACAGCCCCAGAGCTGAAACCTaGGGAAAGAACCAGTGGTTGATCCTGGGAATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HRAHAHSPRAET*GKNQWLILGIL Trigger: CAAGATTCCCAGGATCAACCACTGGTTCTTTCCCAAGGTTTCAGCTCTGGGGCTGTGAGCGTGGGCTCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| CDS-3UTR CCA 90 bp | CCCAGAGCTGAAACCTTGGGAAAGAACCAGTGGTTGATCCTGGGAATCTTGCTGCGGCCAGAGAAATGCTaGAGCACAGTTGGGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PRAETLGKNQWLILGILLRPEKC*STVGVP Trigger: AGGGACCCCAACTGTGCTCCAGCATTTCTCTGGCCG...CAGCAAGATTCCCAGGATCAACCACTGGTTCTTTCCCAAGGTTTCAGCTCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| CDS-3UTR GCA 90 bp | CATGAAGCAAATGATGACAGTACATTCTGGTGGCAGCATTGGACATGGAGAAAGCCCGGTCCCCAGGGCTaGCCTCCAAAGAAACCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: HEANDDSTFWWQHWTWRKPGPQG*PPKKPR Trigger: CCGAGGTTTCTTTGGAGGGCAGCCCTGGGGACCGGG...CTTTCTCCATGTCCAATGCTGCCACCAGAATGTACTGTCATCATTTGCTTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| CDS-3UTR GCA 90 bp | CCCAGAGCTGAAACCTTGGGAAAGAACCAGTGGTTGATCCTGGGAATCTTGCTGACACTTGAAGCACTGTaGGACTCTCATTCTCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PRAETLGKNQWLILGILLTLEAL*DSHSRG Trigger: GCCACGAGAATGAGAGTCGCACAGTGCTTCAAGTGT...CAGCAAGATTCCCAGGATCAACCACTGGTTCTTTCCCAAGGTTTCAGCTCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| CDS-3UTR CCA 90 bp | AGCTTGATCATCTTTAGAGAGGGCAGCAGTGGAGAAGGAAAGATGTTACAGAAGATGCTGGAGCACAGTTaGGGTCCCTCTCGTCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLIIFREGSSGEGKMLQKMLEHS*GPSRRG Trigger: GCCTCGACGAGAGGGACCCCAACTGTGCTCCAGCAT...CTTCTGTAACATCTTTCCTTCTCCACTGCTGCCCTCTCTAAAGATGATCAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR CAA 72 bp | AGCCCCAGAGCTGAAACCTTGGGAAAGAACCAGTGGTaGATCCTGGGAATCTTGCTGGCTTTGAGTAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPRAETLGKNQW*ILGILLALSRK Trigger: CTTCCTACTCAAAGCCAGCAAGATTCCCAGGATCAACCACTGGTTCTTTCCCAAGGTTTCAGCTCTGGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR CAA 72 bp | GCAGAAGCAGATGAATTCTCTGAGTTCAAGGCCAGCTaGGTCTATGGTCTACGGAGTTCCAAGACAGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: AEADEFSEFKAS*VYGLRSSKTAK Trigger: CTTGGCTGTCTTGGAACTCCGTAGACCATAGACCAAGCTGGCCTTGAACTCAGAGAATTCATCTGCTTCTGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR CAA 72 bp | CCATCTGGACAGAGTGAACTAGGTCTGAGATCTGGCTaGGAAGGACTACTGTGTATCATTTGGGGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSGQSELGLRSG*EGLLCIIWGLK Trigger: CTTCAGCCCCCAAATGATACACAGTAGTCCTTCCAAGCCAGATCTCAGACCTAGTTCACTCTGTCCAGATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR CAA 72 bp | GAGAGGAGATGGTGTACTCTGACCCCAGTTTCTGGCTaGGACAACTTGGGTTCTTCAAGAGCTTTCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ERRWCTLTPVSG*DNLGSSRAFRG Trigger: TCCTCTGAAAGCTCTTGAAGAACCCAAGTTGTCCAAGCCAGAAACTGGGGTCAGAGTACACCATCTCCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| CDS-3UTR CCA 90 bp | AGGAGATGGTGTACTCTGACCCCAGTTTCTGGCTTGGACAACTTGGGTTCTTCACGACTCTCATTCTCGTaGCGTCCTTTGCAGAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RRWCTLTPVSGLDNLGSSRLSFS*RPLQKK Trigger: CTTTTTCTGCAAAGGACGCCACGAGAATGAGAGTCG...TGAAGAACCCAAGTTGTCCAAGCCAGAAACTGGGGTCAGAGTACACCATCTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| 3UTR CAA 72 bp | AGGACAGTGACCTGCTACAGACAAGGCCTTGTGTGGTaGGTGGTGCATGCTTGCAATCACTTTTATCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RTVTCYRQGLVW*VVHACNHFYPN Trigger: GTTTGGATAAAAGTGATTGCAAGCATGCACCACCAACCACACAAGGCCTTGTCTGTAGCAGGTCACTGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| CDS-3UTR GCA 90 bp | AATTCTCTGAGTTCAAGGCCAGCTTGGTCTATGGTCTACGGAGTTCCAAGACAGTCTCGTGGCGTCCTTTaGAGAAAAAGGTTCCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: NSLSSRPAWSMVYGVPRQSRGVL*RKRFQN Trigger: ATTCTGGAACCTTTTTCTGCAAAGGACGCCACGAGA...CTGTCTTGGAACTCCGTAGACCATAGACCAAGCTGGCCTTGAACTCAGAGAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| CDS CCA 90 bp | ACCCGGTCCCCAGGGCTGCCCTCCAAAGAAACCTCGGGATTCCCCTaGACCTTTGAGAGCAACAAAGGCAGCAGCGGCAGGACCAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TRSPGLPSKETSGFP*TFESNKGSSGRTKA Trigger: GGCCTTGGTCCTGCCGCTGCTGCCTTTGTTGCTCTCAAAGGTCCAGGGGAATCCCGAGGTTTCTTTGGAGGGCAGCCCTGGGGACCGGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097337.8 ENSMUST00000174190.2 |
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| CDS GCA 90 bp | AGCCGCTTGATACCATTGTCCAGGGAACGCAGGCGGCCAGAGAAATaGTGGAGCACAGTTGGGGTCCCTCTCGTCGAGGCCCACAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: SRLIPLSRERRRPEK*WSTVGVPLVEAHKI Trigger: GATCTTGTGGGCCTCGACGAGAGGGACCCCAACTGTGCTCCAGCATTTCTCTGGCCGCCTGCGTTCCCTGGACAATGGTATCAAGCGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097337.8 ENSMUST00000174190.2 |
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| CDS-3UTR CAA 90 bp | TTGCTGGCTTTGAGTAGGAAGAGCAGGGCACGAGGATCAGAGGGGTCTGTGGGTAGCCGCTTGATACCATaGTCCAGGGAACGCAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LLALSRKSRARGSEGSVGSRLIP*SRERRR Trigger: CCGCCTGCGTTCCCTGGACAATGGTATCAAGCGGCT...ACCCACAGACCCCTCTGATCCTCGTGCCCTGCTCTTCCTACTCAAAGCCAGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| CDS CCA 90 bp | ATACTACAACCGCATAGACAGTGGAGGCATCACCAGAAACCACTGTaGACATCCGGCGGTGCCTCCCGAGGACAGAGTGGTCCAGATCAG | + |
|
Preference number: 5 (lower is better) Translates to: ILQPHRQWRHHQKPL*TSGGASRGQSGPDQ Trigger: CTGATCTGGACCACTCTGTCCTCGGGAGGCACCGCCGGATGTCCACAGTGGTTTCTGGTGATGCCTCCACTGTCTATGCGGTTGTAGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174190.2 |
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| CDS GCA 90 bp | CTGCAGGCCGGCAACCTGCCTTGTCCCCTAACACTTGAAGCACTGTaGGACTCTCATTCTCGTGGCGTCCTTTGCAGAAAAAGGTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LQAGNLPCPLTLEAL*DSHSRGVLCRKRFQ Trigger: CTGGAACCTTTTTCTGCAAAGGACGCCACGAGAATGAGAGTCGCACAGTGCTTCAAGTGTTAGGGGACAAGGCAGGTTGCCGGCCTGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097337.8 ENSMUST00000174190.2 |
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| CDS-3UTR CAA 90 bp | CATGAAGCAAATGATGACAGTACATTCTGGTGGCAGCATTGGACATGGAGAAAGGATTCCCCTGGACCTTaGAGAGCAACAAAGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HEANDDSTFWWQHWTWRKDSPGP*RATKAA Trigger: TGCTGCCTTTGTTGCTCTCAAAGGTCCAGGGGAATC...CTTTCTCCATGTCCAATGCTGCCACCAGAATGTACTGTCATCATTTGCTTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| CDS-3UTR CAA 90 bp | CATGAAGCAAATGATGACAGTACATTCTGGTGGCAGCATTGGACATGGAGAAAGAGCAGCTCTAGCCGCTaGATACCATTGTCCAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: HEANDDSTFWWQHWTWRKSSSSR*IPLSRE Trigger: TTCCCTGGACAATGGTATCAAGCGGCTAGAGCTGCT...CTTTCTCCATGTCCAATGCTGCCACCAGAATGTACTGTCATCATTTGCTTCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097337.8 |
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| CDS CAA 72 bp | GGGAACGCAGGCGGCCAGAGAAATGCTGGAGCACAGTaGGGGTCCCTCTCGTCGAGGCCCACAAGATCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: GNAGGQRNAGAQ*GSLSSRPTRSD Trigger: GTCCGATCTTGTGGGCCTCGACGAGAGGGACCCCAACTGTGCTCCAGCATTTCTCTGGCCGCCTGCGTTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097337.8 ENSMUST00000174190.2 |
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| CDS GCA 72 bp | ATACCATTGTCCAGGGAACGCAGGCGGCCAGAGAAATaGTGGAGCACAGTTGGGGTCCCTCTCGTCGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: IPLSRERRRPEK*WSTVGVPLVEA Trigger: GGCCTCGACGAGAGGGACCCCAACTGTGCTCCAGCATTTCTCTGGCCGCCTGCGTTCCCTGGACAATGGTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097337.8 ENSMUST00000174190.2 |
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| CDS CCA 72 bp | CCGCATAGACAGTGGAGGCATCACCAGAAACCACTGTaGACATCCGGCGGTGCCTCCCGAGGACAGAGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: PHRQWRHHQKPL*TSGGASRGQSG Trigger: ACCACTCTGTCCTCGGGAGGCACCGCCGGATGTCCACAGTGGTTTCTGGTGATGCCTCCACTGTCTATGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097337.8 ENSMUST00000174190.2 |
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| CDS CAA 72 bp | TGCCCTCCAAAGAAACCTCGGGATTCCCCTGGACCTTaGAGAGCAACAAAGGCAGCAGCGGCAGGACCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: CPPKKPRDSPGP*RATKAAAAGPR Trigger: CCTTGGTCCTGCCGCTGCTGCCTTTGTTGCTCTCAAAGGTCCAGGGGAATCCCGAGGTTTCTTTGGAGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097337.8 ENSMUST00000174190.2 |
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| CDS GCA 72 bp | GAAGCACTGTGCGACTCTCATTCTCGTGGCGTCCTTTaGAGAAAAAGGTTCCAGAATCCCCGGCGCTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: EALCDSHSRGVL*RKRFQNPRRSA Trigger: TGCTGAGCGCCGGGGATTCTGGAACCTTTTTCTGCAAAGGACGCCACGAGAATGAGAGTCGCACAGTGCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097337.8 ENSMUST00000174190.2 |
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| CDS TCA 72 bp | ACTCCTGTTCTAAAGGCCTCTGTGGCTCAGCATTTATaGCTGGAGCAAATGTGGGTAGTGGTCCAGGCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: TPVLKASVAQHL*LEQMWVVVQAG Trigger: CCCCGCCTGGACCACTACCCACATTTGCTCCAGTCATAAATGCTGAGCCACAGAGGCCTTTAGAACAGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174190.2 |
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