Pregenerated sensors for MPI (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032306Ensembl transcript IDs: ENSMUST00000034856.15, ENSMUST00000156428.2
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GATGCATGCTTTGTTAGCCTAACACCTCAGCTAGGGCAGAGTGGTTaGCTCTTTGGTGGACACACTGGCTCAGAGGTAACAGTGTTGAGA | + |
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Preference number: 1 (lower is better) Translates to: DACFVSLTPQLGQSG*LFGGHTGSEVTVLR Trigger: TCTCAACACTGTTACCTCTGAGCCAGTGTGTCCACCAAAGAGGCAACCACTCTGCCCTAGCTGAGGTGTTAGGCTAACAAAGCATGCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| 3UTR-3UTR TCA 90 bp | ACACCTCAGCTAGGGCAGAGTGGTTGCCTCTTTGGTGGACACACTGGCTCAGAGGGATTGGGCTACACCTaGAATATGGAGCTGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: TPQLGQSGCLFGGHTGSEGLGYT*NMELAR Trigger: CCTGGCCAGCTCCATATTTCAGGTGTAGCCCAATCC...CTCTGAGCCAGTGTGTCCACCAAAGAGGCAACCACTCTGCCCTAGCTGAGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| 3UTR CAA 90 bp | AGTGGTTGCCTCTTTGGTGGACACACTGGCTCAGAGGTAACAGTGTaGAGAGGGTACAGAAGAGTGGCAGGCCTCAGGCTTCATGCATAC | + |
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Preference number: 2 (lower is better) Translates to: SGCLFGGHTGSEVTV*RGYRRVAGLRLHAY Trigger: GTATGCATGAAGCCTGAGGCCTGCCACTCTTCTGTACCCTCTCAACACTGTTACCTCTGAGCCAGTGTGTCCACCAAAGAGGCAACCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| 3UTR-3UTR GCA 90 bp | TTTGGTGGACACACTGGCTCAGAGGTAACAGTGTTGAGAGGGTACAGAAGAGTGAGGCCTCAGGCTTCATaGATACAGAAACCTTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: FGGHTGSEVTVLRGYRRVRPQAS*IQKPCP Trigger: AGGACAAGGTTTCTGTATGCATGAAGCCTGAGGCCT...CACTCTTCTGTACCCTCTCAACACTGTTACCTCTGAGCCAGTGTGTCCACCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGTTACTAATGCCAAATTTACTGCTTCTAATCCAGTATACATTCAAAGAGGCTACACCTGAAATATaGAGCTGGCCAGGATACAGT | + |
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Preference number: 2 (lower is better) Translates to: LELLMPNLLLLIQYTFKEATPEI*SWPGYS Trigger: ACTGTATCCTGGCCAGCTCCATATTTCAGGTGTAGC...CTCTTTGAATGTATACTGGATTAGAAGCAGTAAATTTGGCATTAGTAACTCCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| 3UTR TCA 72 bp | CAGGCCTCAGGCTTCATGCATACAGAAACCTTGTCCTaGAGATGGTCCAGCCTGGGCATGCTCCTGGAGTTA | + |
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Preference number: 3 (lower is better) Translates to: QASGFMHTETLS*RWSSLGMLLEL Trigger: TAACTCCAGGAGCATGCCCAGGCTGGACCATCTTCAGGACAAGGTTTCTGTATGCATGAAGCCTGAGGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| 3UTR GCA 72 bp | GAGAGGGTACAGAAGAGTGGCAGGCCTCAGGCTTCATaGATACAGAAACCTTGTCCTGAAGATGGTCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: ERVQKSGRPQAS*IQKPCPEDGPA Trigger: GGCTGGACCATCTTCAGGACAAGGTTTCTGTATGCATGAAGCCTGAGGCCTGCCACTCTTCTGTACCCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| 3UTR CCA 72 bp | CACAACAGGGACAGGGATTGGGCTACACCTGAAATATaGAGCTGGCCAGGATACAGTGGTAGGCAGAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: HNRDRDWATPEI*SWPGYSGRQRD Trigger: GTCTCTCTGCCTACCACTGTATCCTGGCCAGCTCCATATTTCAGGTGTAGCCCAATCCCTGTCCCTGTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| 3UTR CCA 72 bp | GCTAGGGCAGAGTGGTTGCCTCTTTGGTGGACACACTaGCTCAGAGGTAACAGTGTTGAGAGGGTACAGAAG | + |
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Preference number: 3 (lower is better) Translates to: ARAEWLPLWWTH*LRGNSVERVQK Trigger: CTTCTGTACCCTCTCAACACTGTTACCTCTGAGCCAGTGTGTCCACCAAAGAGGCAACCACTCTGCCCTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| 3UTR CCA 72 bp | AACACCTCAGCTAGGGCAGAGTGGTTGCCTCTTTGGTaGACACACTGGCTCAGAGGTAACAGTGTTGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: NTSARAEWLPLW*THWLRGNSVER Trigger: CCTCTCAACACTGTTACCTCTGAGCCAGTGTGTCCACCAAAGAGGCAACCACTCTGCCCTAGCTGAGGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| 3UTR CCA 72 bp | CCTAACACCTCAGCTAGGGCAGAGTGGTTGCCTCTTTaGTGGACACACTGGCTCAGAGGTAACAGTGTTGAG | + |
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Preference number: 3 (lower is better) Translates to: PNTSARAEWLPL*WTHWLRGNSVE Trigger: CTCAACACTGTTACCTCTGAGCCAGTGTGTCCACCAAAGAGGCAACCACTCTGCCCTAGCTGAGGTGTTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR GCA 90 bp | GTGCACAACAGGGACAGGGATTGGGCTACACCTGAAATATGGAGCTGGCCAGGACCGATATCACCTGGGTaGTGTTGGTGCAGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: VHNRDRDWATPEIWSWPGPISPG*CWCSCS Trigger: GCTGCAGCTGCACCAACAGCACCCAGGTGATATCGG...TCCTGGCCAGCTCCATATTTCAGGTGTAGCCCAATCCCTGTCCCTGTTGTGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR CCA 90 bp | TGGCTCAGAGGTAACAGTGTTGAGAGGGTACAGAAGAGTGGCAGGCCTCAGGCTTCACCTGGGTGCTGTTaGTGCAGCTGCAGCAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: WLRGNSVERVQKSGRPQASPGCC*CSCSKS Trigger: GCTCTTGCTGCAGCTGCACCAACAGCACCCAGGTGA...AGCCTGAGGCCTGCCACTCTTCTGTACCCTCTCAACACTGTTACCTCTGAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR TCA 90 bp | GTGCACAACAGGGACAGGGATTGGGCTACACCTGAAATATGGAGCTGGCCAGGACCCCAGGCTTCAAGGTaGGCAGGTTCAGGAAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: VHNRDRDWATPEIWSWPGPQASR*AGSGSR Trigger: TCTACTTCCTGAACCTGCTCACCTTGAAGCCTGGGG...TCCTGGCCAGCTCCATATTTCAGGTGTAGCCCAATCCCTGTCCCTGTTGTGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR GCA 90 bp | GCAGCTTCTCTGCCAGCTCCTCTGGCAATGATCGCAGTCAAGGCATCATGCAGAACCCTTGTTAGGGTGTaGCTGGATAGACAGGGCCGT | + |
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Preference number: 4 (lower is better) Translates to: AASLPAPLAMIAVKASCRTLVRV*LDRQGR Trigger: ACGGCCCTGTCTATCCAGGCACACCCTAACAAGGGT...TCTGCATGATGCCTTGACTGCGATCATTGCCAGAGGAGCTGGCAGAGAAGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156428.2 |
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| CDS-3UTR CCA 90 bp | AGCCTAACACCTCAGCTAGGGCAGAGTGGTTGCCTCTTTGGTGGACACACTGGCATCAGGGTAGTGCTCTaGAGCCTGGAGATGCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: SLTPQLGQSGCLFGGHTGIRVVL*SLEMQL Trigger: AAGCTGCATCTCCAGGCTCCAGAGCACTACCCTGAT...GCCAGTGTGTCCACCAAAGAGGCAACCACTCTGCCCTAGCTGAGGTGTTAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR GCA 90 bp | TCAGAGGTAACAGTGTTGAGAGGGTACAGAAGAGTGGCAGGCCTCAGGCTTCATCCTGGGTGCTGTTGGTaGAGCTGCAGCAAGAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SEVTVLRGYRRVAGLRLHPGCCW*SCSKSF Trigger: GAAGCTCTTGCTGCAGCTGCACCAACAGCACCCAGG...ATGAAGCCTGAGGCCTGCCACTCTTCTGTACCCTCTCAACACTGTTACCTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR CCA 90 bp | AGCTTCTCTGCCAGCTCCTCTGGCAATGATCGCAGTCAAGGCATCATGCAGAAAGGTTGTCAAGGATCTTaGCATCTCCCCGGGGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: SFSASSSGNDRSQGIMQKGCQGS*HLPGGV Trigger: CACACCCCCGGGGAGATGCCAAGATCCTTGACAACC...TTTCTGCATGATGCCTTGACTGCGATCATTGCCAGAGGAGCTGGCAGAGAAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156428.2 |
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| CDS-3UTR CCA 90 bp | TGCATACAGAAACCTTGTCCTGAAGATGGTCCAGCCTGGGCATGCTCCTGGAGTTCAGAGCAGAAGCCATaGCCTCAGTATCCCCACCCA | + |
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Preference number: 4 (lower is better) Translates to: CIQKPCPEDGPAWACSWSSEQKP*PQYPHP Trigger: TGGGTGGGGATACTGAGGCCATGGCTTCTGCTCTGA...ACTCCAGGAGCATGCCCAGGCTGGACCATCTTCAGGACAAGGTTTCTGTATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR CCA 90 bp | GTGCACAACAGGGACAGGGATTGGGCTACACCTGAAATATGGAGCTGGCCAGGATGGCATCCAGAAACATaGCTTCCCCAGGCTTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: VHNRDRDWATPEIWSWPGWHPET*LPQASR Trigger: CCTTGAAGCCTGGGGAAGCCATGTTTCTGGATGCCA...TCCTGGCCAGCTCCATATTTCAGGTGTAGCCCAATCCCTGTCCCTGTTGTGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| 3UTR CAA 72 bp | CTCTTTGGTGGACACACTGGCTCAGAGGTAACAGTGTaGAGAGGGTACAGAAGAGTGGCAGGCCTCAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LFGGHTGSEVTV*RGYRRVAGLRL Trigger: AAGCCTGAGGCCTGCCACTCTTCTGTACCCTCTCAACACTGTTACCTCTGAGCCAGTGTGTCCACCAAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| 3UTR CAA 72 bp | CTGGCAATGATCGCAGTCAAGGCATCATGCAGAAACTaGGAGTTCAGCCTACCCAGGGCAGAAACATGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LAMIAVKASCRN*EFSLPRAETWA Trigger: GGCCCATGTTTCTGCCCTGGGTAGGCTGAACTCCAAGTTTCTGCATGATGCCTTGACTGCGATCATTGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156428.2 |
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| CDS-3UTR TCA 90 bp | GCAGCTTCTCTGCCAGCTCCTCTGGCAATGATCGCAGTCAAGGCATCATGCAGAATATGGCTTGTCCTCTaGAATCTGGGCCAGTGGATC | + |
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Preference number: 4 (lower is better) Translates to: AASLPAPLAMIAVKASCRIWLVL*NLGQWI Trigger: GATCCACTGGCCCAGATTTCAGAGGACAAGCCATAT...TCTGCATGATGCCTTGACTGCGATCATTGCCAGAGGAGCTGGCAGAGAAGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156428.2 |
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| CDS-3UTR TCA 90 bp | GAGGGAATACGCTTCATTAGTCCACTGGCCTACCCCTTCCCTTCCTTCCCTTCCCCACTGACAGTACTTTaGAGAGGAAGGGCAGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: EGIRFISPLAYPFPSFPSPLTVL*RGRAAF Trigger: GAAAGCTGCCCTTCCTCTTCAAAGTACTGTCAGTGG...GGAAGGGAAGGAAGGGAAGGGGTAGGCCAGTGGACTAATGAAGCGTATTCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR TCA 90 bp | GCAGCTTCTCTGCCAGCTCCTCTGGCAATGATCGCAGTCAAGGCATCATGCAGACCACTGACAGTACTTTaGAGAGGAAGGGCAGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: AASLPAPLAMIAVKASCRPLTVL*RGRAAF Trigger: GAAAGCTGCCCTTCCTCTTCAAAGTACTGTCAGTGG...TCTGCATGATGCCTTGACTGCGATCATTGCCAGAGGAGCTGGCAGAGAAGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156428.2 |
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| CDS-3UTR GCA 90 bp | TCTGGCAATGATCGCAGTCAAGGCATCATGCAGAAACTTGGAGTTCAGCCTACCCCCCAGGCATACTGCTaGACCACACAGGAAAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: SGNDRSQGIMQKLGVQPTPQAYC*TTQESG Trigger: CCCACTTTCCTGTGTGGTGCAGCAGTATGCCTGGGG...GGTAGGCTGAACTCCAAGTTTCTGCATGATGCCTTGACTGCGATCATTGCCAGA 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000156428.2 |
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| CDS-3UTR CCA 90 bp | AGCTTCTCTGCCAGCTCCTCTGGCAATGATCGCAGTCAAGGCATCATGCAGAAAATGCCACTTCACTTTTaGAGCCCACCTTCCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SFSASSSGNDRSQGIMQKMPLHF*SPPSPR Trigger: CCTGGGGGAAGGTGGGCTCCAAAAGTGAAGTGGCAT...TTTCTGCATGATGCCTTGACTGCGATCATTGCCAGAGGAGCTGGCAGAGAAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000156428.2 |
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| CDS-3UTR CCA 90 bp | AGCTTCTCTGCCAGCTCCTCTGGCAATGATCGCAGTCAAGGCATCATGCAGAAATTGTTAGGGTGTGCCTaGATAGACAGGGCCGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: SFSASSSGNDRSQGIMQKLLGCA*IDRAVS Trigger: GGACACGGCCCTGTCTATCCAGGCACACCCTAACAA...TTTCTGCATGATGCCTTGACTGCGATCATTGCCAGAGGAGCTGGCAGAGAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156428.2 |
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| CDS-3UTR CCA 90 bp | GTGCACAACAGGGACAGGGATTGGGCTACACCTGAAATATGGAGCTGGCCAGGATTTCTGGCTTGTGGTTaGCATCAGGGTAGTGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: VHNRDRDWATPEIWSWPGFLACG*HQGSAL Trigger: CAGAGCACTACCCTGATGCCAACCACAAGCCAGAAA...TCCTGGCCAGCTCCATATTTCAGGTGTAGCCCAATCCCTGTCCCTGTTGTGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR CCA 90 bp | GGCTCAGAGGTAACAGTGTTGAGAGGGTACAGAAGAGTGGCAGGCCTCAGGCTTAAACCACACAAGCCCTaGAAGGAGGTAAGGGCAATG | + |
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Preference number: 4 (lower is better) Translates to: GSEVTVLRGYRRVAGLRLKPHKP*KEVRAM Trigger: CATTGCCCTTACCTCCTTCCAGGGCTTGTGTGGTTT...AAGCCTGAGGCCTGCCACTCTTCTGTACCCTCTCAACACTGTTACCTCTGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR CCA 90 bp | GTGCACAACAGGGACAGGGATTGGGCTACACCTGAAATATGGAGCTGGCCAGGACCTTCAGCTGTGCTGTaGCATCATCTCCAATCAGCA | + |
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Preference number: 4 (lower is better) Translates to: VHNRDRDWATPEIWSWPGPSAVL*HHLQSA Trigger: TGCTGATTGGAGATGATGCCACAGCACAGCTGAAGG...TCCTGGCCAGCTCCATATTTCAGGTGTAGCCCAATCCCTGTCCCTGTTGTGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR CCA 90 bp | GGCTCAGAGGTAACAGTGTTGAGAGGGTACAGAAGAGTGGCAGGCCTCAGGCTTAGGCATGGGGTACGTTaGCATCCAGAAACATGGCTT | + |
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Preference number: 4 (lower is better) Translates to: GSEVTVLRGYRRVAGLRLRHGVR*HPETWL Trigger: AAGCCATGTTTCTGGATGCCAACGTACCCCATGCCT...AAGCCTGAGGCCTGCCACTCTTCTGTACCCTCTCAACACTGTTACCTCTGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR TCA 90 bp | TGCATACAGAAACCTTGTCCTGAAGATGGTCCAGCCTGGGCATGCTCCTGGAGTATATGGCTTGTCCTCTaGAATCTGGGCCAGTGGATC | + |
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Preference number: 4 (lower is better) Translates to: CIQKPCPEDGPAWACSWSIWLVL*NLGQWI Trigger: GATCCACTGGCCCAGATTTCAGAGGACAAGCCATAT...ACTCCAGGAGCATGCCCAGGCTGGACCATCTTCAGGACAAGGTTTCTGTATGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR GCA 90 bp | TTTGGTGGACACACTGGCTCAGAGGTAACAGTGTTGAGAGGGTACAGAAGAGTGGCTAGCCAGCAGGCATaGCACTTCACTTTTGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: FGGHTGSEVTVLRGYRRVASQQA*HFTFGA Trigger: GGCTCCAAAAGTGAAGTGGCATGCCTGCTGGCTAGC...CACTCTTCTGTACCCTCTCAACACTGTTACCTCTGAGCCAGTGTGTCCACCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR GCA 90 bp | TCTGGCAATGATCGCAGTCAAGGCATCATGCAGAAACTTGGAGTTCAGCCTACCGCTAGCCAGCAGGCATaGCACTTCACTTTTGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: SGNDRSQGIMQKLGVQPTASQQA*HFTFGA Trigger: GGCTCCAAAAGTGAAGTGGCATGCCTGCTGGCTAGC...GGTAGGCTGAACTCCAAGTTTCTGCATGATGCCTTGACTGCGATCATTGCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156428.2 |
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| CDS-3UTR CCA 90 bp | ATCCAGTATACATTCAAAGAGTGCACAACAGGGACAGGGATTGGGCTACACCTGGGTTGTCAAGGATCTTaGCATCTCCCCGGGGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: IQYTFKECTTGTGIGLHLGCQGS*HLPGGV Trigger: CACACCCCCGGGGAGATGCCAAGATCCTTGACAACC...CAGGTGTAGCCCAATCCCTGTCCCTGTTGTGCACTCTTTGAATGTATACTGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR CCA 90 bp | AGAGGGTACAGAAGAGTGGCAGGCCTCAGGCTTCATGCATACAGAAACCTTGTCACATCCGATATCACCTaGGTGCTGTTGGTGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: RGYRRVAGLRLHAYRNLVTSDIT*VLLVQL Trigger: CAGCTGCACCAACAGCACCCAGGTGATATCGGATGT...GACAAGGTTTCTGTATGCATGAAGCCTGAGGCCTGCCACTCTTCTGTACCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR CCA 90 bp | TCTGGCAATGATCGCAGTCAAGGCATCATGCAGAAACTTGGAGTTCAGCCTACCTTAAGAGGCCTGGCCTaGGGCCAGGAACCCTTGTTA | + |
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Preference number: 4 (lower is better) Translates to: SGNDRSQGIMQKLGVQPTLRGLA*GQEPLL Trigger: TAACAAGGGTTCCTGGCCCCAGGCCAGGCCTCTTAA...GGTAGGCTGAACTCCAAGTTTCTGCATGATGCCTTGACTGCGATCATTGCCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156428.2 |
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| CDS-3UTR GCA 90 bp | TACAGAAACCTTGTCCTGAAGATGGTCCAGCCTGGGCATGCTCCTGGAGTTACTGCTCTCCTTCAGCTGTaGTGTGGCATCATCTCCAAT | + |
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Preference number: 4 (lower is better) Translates to: YRNLVLKMVQPGHAPGVTALLQL*CGIISN Trigger: ATTGGAGATGATGCCACAGCACAGCTGAAGGAGAGC...AGTAACTCCAGGAGCATGCCCAGGCTGGACCATCTTCAGGACAAGGTTTCTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR CCA 90 bp | ATCCAGTATACATTCAAAGAGTGCACAACAGGGACAGGGATTGGGCTACACCTGATGCCACTTCACTTTTaGAGCCCACCTTCCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: IQYTFKECTTGTGIGLHLMPLHF*SPPSPR Trigger: CCTGGGGGAAGGTGGGCTCCAAAAGTGAAGTGGCAT...CAGGTGTAGCCCAATCCCTGTCCCTGTTGTGCACTCTTTGAATGTATACTGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR CCA 90 bp | GGTTGCCTCTTTGGTGGACACACTGGCTCAGAGGTAACAGTGTTGAGAGGGTACTGGCCTAAGGTCTTCTaGGAAATACGGTTGTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: GCLFGGHTGSEVTVLRGYWPKVF*EIRLSR Trigger: CCTTGACAACCGTATTTCCCAGAAGACCTTAGGCCA...GTACCCTCTCAACACTGTTACCTCTGAGCCAGTGTGTCCACCAAAGAGGCAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR CCA 90 bp | GCAGCTTCTCTGCCAGCTCCTCTGGCAATGATCGCAGTCAAGGCATCATGCAGATTTTCAGCAATCCACTaGCCTAAGGTCTTCTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: AASLPAPLAMIAVKASCRFSAIH*PKVFWE Trigger: TTCCCAGAAGACCTTAGGCCAGTGGATTGCTGAAAA...TCTGCATGATGCCTTGACTGCGATCATTGCCAGAGGAGCTGGCAGAGAAGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156428.2 |
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| CDS-3UTR CCA 90 bp | GTGCACAACAGGGACAGGGATTGGGCTACACCTGAAATATGGAGCTGGCCAGGAGGTTCAGGAAGTAGATaGCGAAACATCCGATATCAC | + |
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Preference number: 4 (lower is better) Translates to: VHNRDRDWATPEIWSWPGGSGSR*RNIRYH Trigger: GTGATATCGGATGTTTCGCCATCTACTTCCTGAACC...TCCTGGCCAGCTCCATATTTCAGGTGTAGCCCAATCCCTGTCCCTGTTGTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR CCA 90 bp | AGCCTAACACCTCAGCTAGGGCAGAGTGGTTGCCTCTTTGGTGGACACACTGGCCATAACAGTGAAGTCTaGCACAGGAGGATCATAGAT | + |
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Preference number: 4 (lower is better) Translates to: SLTPQLGQSGCLFGGHTGHNSEV*HRRIID Trigger: ATCTATGATCCTCCTGTGCCAGACTTCACTGTTATG...GCCAGTGTGTCCACCAAAGAGGCAACCACTCTGCCCTAGCTGAGGTGTTAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR TCA 90 bp | TACAGAAACCTTGTCCTGAAGATGGTCCAGCCTGGGCATGCTCCTGGAGTTACTGATTTCTGCATGGGCTaGAGGTATGATAGCTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: YRNLVLKMVQPGHAPGVTDFCMG*RYDSCH Trigger: GTGACAGCTATCATACCTTCAGCCCATGCAGAAATC...AGTAACTCCAGGAGCATGCCCAGGCTGGACCATCTTCAGGACAAGGTTTCTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR CCA 90 bp | CCAGTATACATTCAAAGAGTGCACAACAGGGACAGGGATTGGGCTACACCTGAAGCTGTCACTGTCCCTTaGACCATCAGAAGGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: PVYIQRVHNRDRDWATPEAVTVP*TIRRML Trigger: CAGCATCCTTCTGATGGTCCAAGGGACAGTGACAGC...TTCAGGTGTAGCCCAATCCCTGTCCCTGTTGTGCACTCTTTGAATGTATACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR GCA 90 bp | CCAGTATACATTCAAAGAGTGCACAACAGGGACAGGGATTGGGCTACACCTGAAGTCATCTTGACTCTGTaGTGGGGCAAACAGCCTGTT | + |
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Preference number: 4 (lower is better) Translates to: PVYIQRVHNRDRDWATPEVILTL*WGKQPV Trigger: AACAGGCTGTTTGCCCCAGCACAGAGTCAAGATGAC...TTCAGGTGTAGCCCAATCCCTGTCCCTGTTGTGCACTCTTTGAATGTATACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR CCA 90 bp | TCTAATCCAGTATACATTCAAAGAGTGCACAACAGGGACAGGGATTGGGCTACATTGTTAGGGTGTGCCTaGATAGACAGGGCCGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SNPVYIQRVHNRDRDWATLLGCA*IDRAVS Trigger: GGACACGGCCCTGTCTATCCAGGCACACCCTAACAA...TGTAGCCCAATCCCTGTCCCTGTTGTGCACTCTTTGAATGTATACTGGATTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR CCA 90 bp | GTATACATTCAAAGAGTGCACAACAGGGACAGGGATTGGGCTACACCTGAAATAGGCAATGGCCATTTCTaGCTTGTGGTTGGCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VYIQRVHNRDRDWATPEIGNGHF*LVVGIR Trigger: CCTGATGCCAACCACAAGCCAGAAATGGCCATTGCC...TATTTCAGGTGTAGCCCAATCCCTGTCCCTGTTGTGCACTCTTTGAATGTATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR GCA 90 bp | AGCCTGGGCATGCTCCTGGAGTTACTAATGCCAAATTTACTGCTTCTAATCCAGTTTCCGTCAAATACTTaGTGGGAGATCCGTTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: SLGMLLELLMPNLLLLIQFPSNT*WEIRFT Trigger: GGTGAAACGGATCTCCCAGCAAGTATTTGACGGAAA...CTGGATTAGAAGCAGTAAATTTGGCATTAGTAACTCCAGGAGCATGCCCAGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR GCA 90 bp | TATACATTCAAAGAGTGCACAACAGGGACAGGGATTGGGCTACACCTGAAATATGACACTCTCATTGGCTaGAATGAAGAGCACTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: YTFKECTTGTGIGLHLKYDTLIG*NEEHST Trigger: GGTGGAGTGCTCTTCATTGCAGCCAATGAGAGTGTC...ATATTTCAGGTGTAGCCCAATCCCTGTCCCTGTTGTGCACTCTTTGAATGTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR CCA 90 bp | TCTAATCCAGTATACATTCAAAGAGTGCACAACAGGGACAGGGATTGGGCTACATCTCCAATCAGCAACTaGAACTCAGGCACCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SNPVYIQRVHNRDRDWATSPISN*NSGTFF Trigger: GAAGAAGGTGCCTGAGTTCCAGTTGCTGATTGGAGA...TGTAGCCCAATCCCTGTCCCTGTTGTGCACTCTTTGAATGTATACTGGATTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR GCA 90 bp | CCTGGAGTTACTAATGCCAAATTTACTGCTTCTAATCCAGTATACATTCAAAGACCCCAGGCATACTGCTaGACCACACAGGAAAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGVTNAKFTASNPVYIQRPQAYC*TTQESG Trigger: CCCACTTTCCTGTGTGGTGCAGCAGTATGCCTGGGG...TCTTTGAATGTATACTGGATTAGAAGCAGTAAATTTGGCATTAGTAACTCCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR CCA 90 bp | TCTAATCCAGTATACATTCAAAGAGTGCACAACAGGGACAGGGATTGGGCTACATTTTCAGCAATCCACTaGCCTAAGGTCTTCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SNPVYIQRVHNRDRDWATFSAIH*PKVFWE Trigger: TTCCCAGAAGACCTTAGGCCAGTGGATTGCTGAAAA...TGTAGCCCAATCCCTGTCCCTGTTGTGCACTCTTTGAATGTATACTGGATTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR CCA 90 bp | GCTCCTGGAGTTACTAATGCCAAATTTACTGCTTCTAATCCAGTATACATTCAACACAATCTCCTCCACTaGCCGGAAACCACACAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: APGVTNAKFTASNPVYIQHNLLH*PETTQA Trigger: GGCTTGTGTGGTTTCCGGCCAGTGGAGGAGATTGTG...TTGAATGTATACTGGATTAGAAGCAGTAAATTTGGCATTAGTAACTCCAGGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR GCA 90 bp | GCTCCTGGAGTTACTAATGCCAAATTTACTGCTTCTAATCCAGTATACATTCAAACCAACAGGTTAAGCTaGTCCACCACCACCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: APGVTNAKFTASNPVYIQTNRLS*STTTFF Trigger: GAAGAAGGTGGTGGTGGAGCAGCTTAACCTGTTGGT...TTGAATGTATACTGGATTAGAAGCAGTAAATTTGGCATTAGTAACTCCAGGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR GCA 90 bp | CTGGAGTTACTAATGCCAAATTTACTGCTTCTAATCCAGTATACATTCAAAGAGTGTCCGAACATGCCATaGATTCCACGCAGTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LELLMPNLLLLIQYTFKECPNMP*IPRSLP Trigger: AGGGAGACTGCGTGGAATGCATGGCATGTTCGGACA...CTCTTTGAATGTATACTGGATTAGAAGCAGTAAATTTGGCATTAGTAACTCCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR GCA 90 bp | CCTGGAGTTACTAATGCCAAATTTACTGCTTCTAATCCAGTATACATTCAAAGAGGTATTGTCCGAACATaGCATGCATTCCACGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGVTNAKFTASNPVYIQRGIVRT*HAFHAV Trigger: GACTGCGTGGAATGCATGGCATGTTCGGACAATACC...TCTTTGAATGTATACTGGATTAGAAGCAGTAAATTTGGCATTAGTAACTCCAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR CCA 90 bp | CCTGGAGTTACTAATGCCAAATTTACTGCTTCTAATCCAGTATACATTCAAAGATCACTCTTCATCAGGTaGGAAAAGCAGTTCCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGVTNAKFTASNPVYIQRSLFIR*EKQFLR Trigger: TCTGAGGAACTGCTTTTCCCACCTGATGAAGAGTGA...TCTTTGAATGTATACTGGATTAGAAGCAGTAAATTTGGCATTAGTAACTCCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS CCA 90 bp | GGCAATGGCCATTTCTGGCTTGTGGTTGGCATCAGGGTAGTGCTCTaGAGCCTGGAGATGCAGCTTCTCTGCCAGCTCCTTGTTAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GNGHFWLVVGIRVVL*SLEMQLLCQLLVRV Trigger: CACCCTAACAAGGAGCTGGCAGAGAAGCTGCATCTCCAGGCTCCAGAGCACTACCCTGATGCCAACCACAAGCCAGAAATGGCCATTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS CCA 90 bp | CACTCTTCATCAGGTGGGAAAAGCAGTTCCTCAGAGCAGAAGCCATaGCCTCAGTATCCCCACCCACGCTCTCCTTCAGCTGTGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HSSSGGKSSSSEQKP*PQYPHPRSPSAVLW Trigger: CCACAGCACAGCTGAAGGAGAGCGTGGGTGGGGATACTGAGGCCATGGCTTCTGCTCTGAGGAACTGCTTTTCCCACCTGATGAAGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS CCA 90 bp | TTAAGAGGCCTGGCCTGGGGCCAGGAACCCTTGTTAGGGTGTGCCTaGATAGACAGGGCCGTGTCCACTGACAGTACTTTGAAGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LRGLAWGQEPLLGCA*IDRAVSTDSTLKRK Trigger: CTTCCTCTTCAAAGTACTGTCAGTGGACACGGCCCTGTCTATCCAGGCACACCCTAACAAGGGTTCCTGGCCCCAGGCCAGGCCTCTTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156428.2 |
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| CDS CCA 90 bp | GAAACCACACAAGCCCTGGAAGGAGGTAAGGGCAATGGCCATTTCTaGCTTGTGGTTGGCATCAGGGTAGTGCTCTGGAGCCTGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: ETTQALEGGKGNGHF*LVVGIRVVLWSLEM Trigger: CATCTCCAGGCTCCAGAGCACTACCCTGATGCCAACCACAAGCCAGAAATGGCCATTGCCCTTACCTCCTTCCAGGGCTTGTGTGGTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR CAA 90 bp | AGCCTAACACCTCAGCTAGGGCAGAGTGGTTGCCTCTTTGGTGGACACACTGGCAGCTGTCACTGTCCCTaGGACCATCAGAAGGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLTPQLGQSGCLFGGHTGSCHCP*DHQKDA Trigger: AGCATCCTTCTGATGGTCCAAGGGACAGTGACAGCT...GCCAGTGTGTCCACCAAAGAGGCAACCACTCTGCCCTAGCTGAGGTGTTAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS CCA 90 bp | TGTGTCCCCATCCACAGCTCTGCATATGGCTTGTCCTCTGAAATCTaGGCCAGTGGATCACTGCTAGCCAGCAGGCATGCCACTTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: CVPIHSSAYGLSSEI*ASGSLLASRHATSL Trigger: AAGTGAAGTGGCATGCCTGCTGGCTAGCAGTGATCCACTGGCCCAGATTTCAGAGGACAAGCCATATGCAGAGCTGTGGATGGGGACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034856.15 ENSMUST00000156428.2 |
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| CDS CCA 90 bp | CTGGAACTCAGGCACCTTCTTCATAAAGGTCACAATCTCCTCCACTaGCCGGAAACCACACAAGCCCTGGAAGGAGGTAAGGGCAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: LELRHLLHKGHNLLH*PETTQALEGGKGNG Trigger: GCCATTGCCCTTACCTCCTTCCAGGGCTTGTGTGGTTTCCGGCCAGTGGAGGAGATTGTGACCTTTATGAAGAAGGTGCCTGAGTTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS TCA 90 bp | GGGGTACGTTGGCATCCAGAAACATGGCTTCCCCAGGCTTCAAGGTaGGCAGGTTCAGGAAGTAGATGGCGAAACATCCGATATCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: GVRWHPETWLPQASR*AGSGSRWRNIRYHL Trigger: CAGGTGATATCGGATGTTTCGCCATCTACTTCCTGAACCTGCTCACCTTGAAGCCTGGGGAAGCCATGTTTCTGGATGCCAACGTACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS CCA 90 bp | ATAAAGGTCACAATCTCCTCCACTGGCCGGAAACCACACAAGCCCTaGAAGGAGGTAAGGGCAATGGCCATTTCTGGCTTGTGGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: IKVTISSTGRKPHKP*KEVRAMAISGLWLA Trigger: TGCCAACCACAAGCCAGAAATGGCCATTGCCCTTACCTCCTTCCAGGGCTTGTGTGGTTTCCGGCCAGTGGAGGAGATTGTGACCTTTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR CAA 90 bp | TCTGGCAATGATCGCAGTCAAGGCATCATGCAGAAACTTGGAGTTCAGCCTACCTGGGGCCAGGAACCCTaGTTAGGGTGTGCCTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: SGNDRSQGIMQKLGVQPTWGQEP*LGCAWI Trigger: TATCCAGGCACACCCTAACAAGGGTTCCTGGCCCCA...GGTAGGCTGAACTCCAAGTTTCTGCATGATGCCTTGACTGCGATCATTGCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156428.2 |
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| CDS CCA 90 bp | AGGTTAAGCTGCTCCACCACCACCTTCTTCTCACTCTTCATCAGGTaGGAAAAGCAGTTCCTCAGAGCAGAAGCCATGGCCTCAGTATCC | + |
|
Preference number: 5 (lower is better) Translates to: RLSCSTTTFFSLFIR*EKQFLRAEAMASVS Trigger: GGATACTGAGGCCATGGCTTCTGCTCTGAGGAACTGCTTTTCCCACCTGATGAAGAGTGAGAAGAAGGTGGTGGTGGAGCAGCTTAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS CCA 90 bp | GCTGCAATGAAGAGCACTCCACCACGGTACAGAGGGATTTCTGCATaGGCTGAAGGTATGATAGCTGTCACTGTCCCTTGGACCATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: AAMKSTPPRYRGISA*AEGMIAVTVPWTIR Trigger: TCTGATGGTCCAAGGGACAGTGACAGCTATCATACCTTCAGCCCATGCAGAAATCCCTCTGTACCGTGGTGGAGTGCTCTTCATTGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS TCA 90 bp | CAGCTCCTTGTTAGGGTGTGCCTGGATAGACAGGGCCGTGTCCACTaGCAGTACTTTGAAGAGGAAGGGCAGCTTTCCATTAAAGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: QLLVRVCLDRQGRVH*QYFEEEGQLSIKGV Trigger: AACACCTTTAATGGAAAGCTGCCCTTCCTCTTCAAAGTACTGTCAGTGGACACGGCCCTGTCTATCCAGGCACACCCTAACAAGGAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS TCA 90 bp | GGAACCCTTGTTAGGGTGTGCCTGGATAGACAGGGCCGTGTCCACTaGCAGTACTTTGAAGAGGAAGGGCAGCTTTCCATTAAAGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GTLVRVCLDRQGRVH*QYFEEEGQLSIKGV Trigger: AACACCTTTAATGGAAAGCTGCCCTTCCTCTTCAAAGTACTGTCAGTGGACACGGCCCTGTCTATCCAGGCACACCCTAACAAGGGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156428.2 |
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| CDS CCA 90 bp | GTTGTTGCTGGGGCTAGGTGTGTAGTTGAGCATTTCACACAGGGTTaGCACATCAATGAATTTGGGTGTCAGGCCAGCACGCACGGTATT | + |
|
Preference number: 5 (lower is better) Translates to: VVAGARCVVEHFTQG*HINEFGCQASTHGI Trigger: AATACCGTGCGTGCTGGCCTGACACCCAAATTCATTGATGTGCCAACCCTGTGTGAAATGCTCAACTACACACCTAGCCCCAGCAACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR CAA 90 bp | TCTGGCAATGATCGCAGTCAAGGCATCATGCAGAAACTTGGAGTTCAGCCTACCAGCTCTGCATATGGCTaGTCCTCTGAAATCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SGNDRSQGIMQKLGVQPTSSAYG*SSEIWA Trigger: GGCCCAGATTTCAGAGGACAAGCCATATGCAGAGCT...GGTAGGCTGAACTCCAAGTTTCTGCATGATGCCTTGACTGCGATCATTGCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156428.2 |
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| CDS TCA 90 bp | AATGAAGAGCACTCCACCACGGTACAGAGGGATTTCTGCATGGGCTaGAGGTATGATAGCTGTCACTGTCCCTTGGACCATCAGAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: NEEHSTTVQRDFCMG*RYDSCHCPLDHQKD Trigger: ATCCTTCTGATGGTCCAAGGGACAGTGACAGCTATCATACCTTCAGCCCATGCAGAAATCCCTCTGTACCGTGGTGGAGTGCTCTTCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS CCA 90 bp | ACGCTCTCCTTCAGCTGTGCTGTGGCATCATCTCCAATCAGCAACTaGAACTCAGGCACCTTCTTCATAAAGGTCACAATCTCCTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: TLSFSCAVASSPISN*NSGTFFIKVTISST Trigger: AGTGGAGGAGATTGTGACCTTTATGAAGAAGGTGCCTGAGTTCCAGTTGCTGATTGGAGATGATGCCACAGCACAGCTGAAGGAGAGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS CCA 90 bp | GGGATTTCTGCATGGGCTGAAGGTATGATAGCTGTCACTGTCCCTTaGACCATCAGAAGGATGCTGGCAGAGTCTAGTGTTGAGACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GISAWAEGMIAVTVP*TIRRMLAESSVETL Trigger: CAAAGTCTCAACACTAGACTCTGCCAGCATCCTTCTGATGGTCCAAGGGACAGTGACAGCTATCATACCTTCAGCCCATGCAGAAATCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR CAA 90 bp | CTCAGAGGTAACAGTGTTGAGAGGGTACAGAAGAGTGGCAGGCCTCAGGCTTCACCATTAAAGGTGTTTTaGACCTTTGAGCCCAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LRGNSVERVQKSGRPQASPLKVF*TFEPKQ Trigger: CTGCTTGGGCTCAAAGGTCAAAAACACCTTTAATGG...TGAAGCCTGAGGCCTGCCACTCTTCTGTACCCTCTCAACACTGTTACCTCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR CAA 90 bp | AGCTTCTCTGCCAGCTCCTCTGGCAATGATCGCAGTCAAGGCATCATGCAGAAATCCACTGACAGTACTTaGAAGAGGAAGGGCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SFSASSSGNDRSQGIMQKSTDST*KRKGSF Trigger: AAAGCTGCCCTTCCTCTTCAAAGTACTGTCAGTGGA...TTTCTGCATGATGCCTTGACTGCGATCATTGCCAGAGGAGCTGGCAGAGAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156428.2 |
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| CDS-3UTR CAA 90 bp | CCAGTATACATTCAAAGAGTGCACAACAGGGACAGGGATTGGGCTACACCTGAATTCTCTGCCAGCTCCTaGTTAGGGTGTGCCTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: PVYIQRVHNRDRDWATPEFSASS*LGCAWI Trigger: TATCCAGGCACACCCTAACAAGGAGCTGGCAGAGAA...TTCAGGTGTAGCCCAATCCCTGTCCCTGTTGTGCACTCTTTGAATGTATACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS CCA 90 bp | TTTTTGACCTTTGAGCCCAAGCAGTCCGGGTTTTCAGCAATCCACTaGCCTAAGGTCTTCTGGGAAATACGGTTGTCAAGGATCTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FLTFEPKQSGFSAIH*PKVFWEIRLSRILA Trigger: TGCCAAGATCCTTGACAACCGTATTTCCCAGAAGACCTTAGGCCAGTGGATTGCTGAAAACCCGGACTGCTTGGGCTCAAAGGTCAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034856.15 ENSMUST00000156428.2 |
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| CDS-3UTR CAA 90 bp | TACAGAAACCTTGTCCTGAAGATGGTCCAGCCTGGGCATGCTCCTGGAGTTACTAGTAAGACACTCTCATaGGCTGCAATGAAGAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: YRNLVLKMVQPGHAPGVTSKTLS*AAMKST Trigger: AGTGCTCTTCATTGCAGCCAATGAGAGTGTCTTACT...AGTAACTCCAGGAGCATGCCCAGGCTGGACCATCTTCAGGACAAGGTTTCTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR CAA 90 bp | GTATACATTCAAAGAGTGCACAACAGGGACAGGGATTGGGCTACACCTGAAATAAGCTCTGCATATGGCTaGTCCTCTGAAATCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VYIQRVHNRDRDWATPEISSAYG*SSEIWA Trigger: GGCCCAGATTTCAGAGGACAAGCCATATGCAGAGCT...TATTTCAGGTGTAGCCCAATCCCTGTCCCTGTTGTGCACTCTTTGAATGTATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR CAA 90 bp | TCTGGCAATGATCGCAGTCAAGGCATCATGCAGAAACTTGGAGTTCAGCCTACCTTCTGGGAAATACGGTaGTCAAGGATCTTGGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SGNDRSQGIMQKLGVQPTFWEIR*SRILAS Trigger: AGATGCCAAGATCCTTGACAACCGTATTTCCCAGAA...GGTAGGCTGAACTCCAAGTTTCTGCATGATGCCTTGACTGCGATCATTGCCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156428.2 |
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| CDS-3UTR CAA 90 bp | CTTGTCCTGAAGATGGTCCAGCCTGGGCATGCTCCTGGAGTTACTAATGCCAAAAATATCAGCAGATCCTaGGGCACAGTAATCTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LVLKMVQPGHAPGVTNAKNISRS*GTVIFS Trigger: ACTGAAGATTACTGTGCCCAAGGATCTGCTGATATT...TTTGGCATTAGTAACTCCAGGAGCATGCCCAGGCTGGACCATCTTCAGGACAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS CCA 90 bp | TTCAGTGACAGAGCTAGGGACCTCCATCTTCATAACAGTGAAGTCTaGCACAGGAGGATCATAGATAGAGAGATAGGGGTCATCTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: FSDRARDLHLHNSEV*HRRIIDREIGVILT Trigger: AGTCAAGATGACCCCTATCTCTCTATCTATGATCCTCCTGTGCCAGACTTCACTGTTATGAAGATGGAGGTCCCTAGCTCTGTCACTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR CAA 90 bp | TATACATTCAAAGAGTGCACAACAGGGACAGGGATTGGGCTACACCTGAAATATTTCTGGGAAATACGGTaGTCAAGGATCTTGGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: YTFKECTTGTGIGLHLKYFWEIR*SRILAS Trigger: AGATGCCAAGATCCTTGACAACCGTATTTCCCAGAA...ATATTTCAGGTGTAGCCCAATCCCTGTCCCTGTTGTGCACTCTTTGAATGTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR CAA 90 bp | GTATACATTCAAAGAGTGCACAACAGGGACAGGGATTGGGCTACACCTGAAATATCTAGTGTTGAGACTTaGTATTCAGTGACAGAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: VYIQRVHNRDRDWATPEISSVET*YSVTEL Trigger: TAGCTCTGTCACTGAATACAAAGTCTCAACACTAGA...TATTTCAGGTGTAGCCCAATCCCTGTCCCTGTTGTGCACTCTTTGAATGTATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS-3UTR CAA 90 bp | GCTCCTGGAGTTACTAATGCCAAATTTACTGCTTCTAATCCAGTATACATTCAATCCACTGACAGTACTTaGAAGAGGAAGGGCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: APGVTNAKFTASNPVYIQSTDST*KRKGSF Trigger: AAAGCTGCCCTTCCTCTTCAAAGTACTGTCAGTGGA...TTGAATGTATACTGGATTAGAAGCAGTAAATTTGGCATTAGTAACTCCAGGAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS GCA 72 bp | AATCTGGGCCAGTGGATCACTGCTAGCCAGCAGGCATaGCACTTCACTTTTGGAGCCCACCTTCCCCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: NLGQWITASQQA*HFTFGAHLPPG Trigger: GCCTGGGGGAAGGTGGGCTCCAAAAGTGAAGTGGCATGCCTGCTGGCTAGCAGTGATCCACTGGCCCAGATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034856.15 ENSMUST00000156428.2 |
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| CDS CCA 72 bp | CTGGCCTGGGGCCAGGAACCCTTGTTAGGGTGTGCCTaGATAGACAGGGCCGTGTCCACTGACAGTACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LAWGQEPLLGCA*IDRAVSTDSTL Trigger: CAAAGTACTGTCAGTGGACACGGCCCTGTCTATCCAGGCACACCCTAACAAGGGTTCCTGGCCCCAGGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156428.2 |
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| CDS GCA 72 bp | TCACTTTTGGAGCCCACCTTCCCCCAGGCATACTGCTaGACCACACAGGAAAGTGGGAACACTCGCGGACTC | + |
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Preference number: 6 (lower is better) Translates to: SLLEPTFPQAYC*TTQESGNTRGL Trigger: GAGTCCGCGAGTGTTCCCACTTTCCTGTGTGGTGCAGCAGTATGCCTGGGGGAAGGTGGGCTCCAAAAGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS CCA 72 bp | CCACGCAGTCTCCCTTCAGGTAGGCATGGGGTACGTTaGCATCCAGAAACATGGCTTCCCCAGGCTTCAAGG | + |
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Preference number: 6 (lower is better) Translates to: PRSLPSGRHGVR*HPETWLPQASR Trigger: CCTTGAAGCCTGGGGAAGCCATGTTTCTGGATGCCAACGTACCCCATGCCTACCTGAAGGGAGACTGCGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS GCA 72 bp | ACTTCACTTTTGGAGCCCACCTTCCCCCAGGCATACTaGTGCACCACACAGGAAAGTGGGAACACTCGCGGA | + |
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Preference number: 6 (lower is better) Translates to: TSLLEPTFPQAY*CTTQESGNTRG Trigger: TCCGCGAGTGTTCCCACTTTCCTGTGTGGTGCAGCAGTATGCCTGGGGGAAGGTGGGCTCCAAAAGTGAAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS CCA 72 bp | CAAGCCCTGGAAGGAGGTAAGGGCAATGGCCATTTCTaGCTTGTGGTTGGCATCAGGGTAGTGCTCTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: QALEGGKGNGHF*LVVGIRVVLWS Trigger: GCTCCAGAGCACTACCCTGATGCCAACCACAAGCCAGAAATGGCCATTGCCCTTACCTCCTTCCAGGGCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS CCA 72 bp | TCAGGTGGGAAAAGCAGTTCCTCAGAGCAGAAGCCATaGCCTCAGTATCCCCACCCACGCTCTCCTTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SGGKSSSSEQKP*PQYPHPRSPSA Trigger: AGCTGAAGGAGAGCGTGGGTGGGGATACTGAGGCCATGGCTTCTGCTCTGAGGAACTGCTTTTCCCACCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS CCA 72 bp | TGCAGCTTCTCTGCCAGCTCCTTGTTAGGGTGTGCCTaGATAGACAGGGCCGTGTCCACTGACAGTACTTTG | + |
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Preference number: 6 (lower is better) Translates to: CSFSASSLLGCA*IDRAVSTDSTL Trigger: CAAAGTACTGTCAGTGGACACGGCCCTGTCTATCCAGGCACACCCTAACAAGGAGCTGGCAGAGAAGCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS CCA 72 bp | ACAATCTCCTCCACTGGCCGGAAACCACACAAGCCCTaGAAGGAGGTAAGGGCAATGGCCATTTCTGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: TISSTGRKPHKP*KEVRAMAISGL Trigger: CAAGCCAGAAATGGCCATTGCCCTTACCTCCTTCCAGGGCTTGTGTGGTTTCCGGCCAGTGGAGGAGATTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS CCA 72 bp | CAGTATCCCCACCCACGCTCTCCTTCAGCTGTGCTGTaGCATCATCTCCAATCAGCAACTGGAACTCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: QYPHPRSPSAVL*HHLQSATGTQA Trigger: TGCCTGAGTTCCAGTTGCTGATTGGAGATGATGCCACAGCACAGCTGAAGGAGAGCGTGGGTGGGGATACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS CAA 72 bp | GCAATCCACTGGCCTAAGGTCTTCTGGGAAATACGGTaGTCAAGGATCTTGGCATCTCCCCGGGGGTGTGTC | + |
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Preference number: 6 (lower is better) Translates to: AIHWPKVFWEIR*SRILASPRGCV Trigger: GACACACCCCCGGGGAGATGCCAAGATCCTTGACAACCGTATTTCCCAGAAGACCTTAGGCCAGTGGATTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034856.15 ENSMUST00000156428.2 |
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| CDS CCA 72 bp | TGCTCCACCACCACCTTCTTCTCACTCTTCATCAGGTaGGAAAAGCAGTTCCTCAGAGCAGAAGCCATGGCC | + |
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Preference number: 6 (lower is better) Translates to: CSTTTFFSLFIR*EKQFLRAEAMA Trigger: GGCCATGGCTTCTGCTCTGAGGAACTGCTTTTCCCACCTGATGAAGAGTGAGAAGAAGGTGGTGGTGGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS CAA 72 bp | TCAATGAATTTGGGTGTCAGGCCAGCACGCACGGTATaGTCCGAACATGCCATGCATTCCACGCAGTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: SMNLGVRPARTV*SEHAMHSTQSP Trigger: GGGAGACTGCGTGGAATGCATGGCATGTTCGGACAATACCGTGCGTGCTGGCCTGACACCCAAATTCATTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS TCA 72 bp | GTTAGGGTGTGCCTGGATAGACAGGGCCGTGTCCACTaGCAGTACTTTGAAGAGGAAGGGCAGCTTTCCATT | + |
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Preference number: 6 (lower is better) Translates to: VRVCLDRQGRVH*QYFEEEGQLSI Trigger: AATGGAAAGCTGCCCTTCCTCTTCAAAGTACTGTCAGTGGACACGGCCCTGTCTATCCAGGCACACCCTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034856.15 ENSMUST00000156428.2 |
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| CDS TCA 72 bp | TGGCATCCAGAAACATGGCTTCCCCAGGCTTCAAGGTaGGCAGGTTCAGGAAGTAGATGGCGAAACATCCGA | + |
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Preference number: 6 (lower is better) Translates to: WHPETWLPQASR*AGSGSRWRNIR Trigger: TCGGATGTTTCGCCATCTACTTCCTGAACCTGCTCACCTTGAAGCCTGGGGAAGCCATGTTTCTGGATGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS CCA 72 bp | GGGGCTAGGTGTGTAGTTGAGCATTTCACACAGGGTTaGCACATCAATGAATTTGGGTGTCAGGCCAGCACG | + |
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Preference number: 6 (lower is better) Translates to: GARCVVEHFTQG*HINEFGCQAST Trigger: CGTGCTGGCCTGACACCCAAATTCATTGATGTGCCAACCCTGTGTGAAATGCTCAACTACACACCTAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS CCA 72 bp | TTTGAGCCCAAGCAGTCCGGGTTTTCAGCAATCCACTaGCCTAAGGTCTTCTGGGAAATACGGTTGTCAAGG | + |
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Preference number: 6 (lower is better) Translates to: FEPKQSGFSAIH*PKVFWEIRLSR Trigger: CCTTGACAACCGTATTTCCCAGAAGACCTTAGGCCAGTGGATTGCTGAAAACCCGGACTGCTTGGGCTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034856.15 ENSMUST00000156428.2 |
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| CDS CCA 72 bp | ATAGATAGAGAGATAGGGGTCATCTTGACTCTGTGCTaGGGCAAACAGCCTGTTGTTGCTGGGGCTAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: IDREIGVILTLC*GKQPVVAGARC Trigger: ACACCTAGCCCCAGCAACAACAGGCTGTTTGCCCCAGCACAGAGTCAAGATGACCCCTATCTCTCTATCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS CCA 72 bp | GCATGGGCTGAAGGTATGATAGCTGTCACTGTCCCTTaGACCATCAGAAGGATGCTGGCAGAGTCTAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: AWAEGMIAVTVP*TIRRMLAESSV Trigger: AACACTAGACTCTGCCAGCATCCTTCTGATGGTCCAAGGGACAGTGACAGCTATCATACCTTCAGCCCATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS CAA 72 bp | GCCTGGATAGACAGGGCCGTGTCCACTGACAGTACTTaGAAGAGGAAGGGCAGCTTTCCATTAAAGGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: AWIDRAVSTDST*KRKGSFPLKVF Trigger: AAACACCTTTAATGGAAAGCTGCCCTTCCTCTTCAAAGTACTGTCAGTGGACACGGCCCTGTCTATCCAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034856.15 ENSMUST00000156428.2 |
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| CDS CAA 72 bp | TTGAGCATTTCACACAGGGTTGGCACATCAATGAATTaGGGTGTCAGGCCAGCACGCACGGTATTGTCCGAA | + |
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Preference number: 6 (lower is better) Translates to: LSISHRVGTSMN*GVRPARTVLSE Trigger: TTCGGACAATACCGTGCGTGCTGGCCTGACACCCAAATTCATTGATGTGCCAACCCTGTGTGAAATGCTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS TCA 72 bp | GAAGGGCAGCTTTCCATTAAAGGTGTTTTTGACCTTTaGGCCCAAGCAGTCCGGGTTTTCAGCAATCCACTG | + |
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Preference number: 6 (lower is better) Translates to: EGQLSIKGVFDL*AQAVRVFSNPL Trigger: CAGTGGATTGCTGAAAACCCGGACTGCTTGGGCTCAAAGGTCAAAAACACCTTTAATGGAAAGCTGCCCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034856.15 ENSMUST00000156428.2 |
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| CDS CAA 72 bp | TCCTTGGGCACAGTAATCTTCAGTAAGACACTCTCATaGGCTGCAATGAAGAGCACTCCACCACGGTACAGA | + |
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Preference number: 6 (lower is better) Translates to: SLGTVIFSKTLS*AAMKSTPPRYR Trigger: TCTGTACCGTGGTGGAGTGCTCTTCATTGCAGCCAATGAGAGTGTCTTACTGAAGATTACTGTGCCCAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS CAA 72 bp | TACAGCAGACAGCAGGCCCGGAATATCAGCAGATCCTaGGGCACAGTAATCTTCAGTAAGACACTCTCATTG | + |
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Preference number: 6 (lower is better) Translates to: YSRQQARNISRS*GTVIFSKTLSL Trigger: CAATGAGAGTGTCTTACTGAAGATTACTGTGCCCAAGGATCTGCTGATATTCCGGGCCTGCTGTCTGCTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS CAA 90 bp | GACAGTACTTTGAAGAGGAAGGGCAGCTTTCCATTAAAGGTGTTTTaGACCTTTGAGCCCAAGCAGTCCGGGTTTTCAGCAATCCACTGG | + |
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Preference number: 6 (lower is better) Translates to: DSTLKRKGSFPLKVF*TFEPKQSGFSAIHW Trigger: CCAGTGGATTGCTGAAAACCCGGACTGCTTGGGCTCAAAGGTCAAAAACACCTTTAATGGAAAGCTGCCCTTCCTCTTCAAAGTACTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034856.15 ENSMUST00000156428.2 |
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| CDS CAA 90 bp | TTAGGGTGTGCCTGGATAGACAGGGCCGTGTCCACTGACAGTACTTaGAAGAGGAAGGGCAGCTTTCCATTAAAGGTGTTTTTGACCTTT | + |
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Preference number: 6 (lower is better) Translates to: LGCAWIDRAVSTDST*KRKGSFPLKVFLTF Trigger: AAAGGTCAAAAACACCTTTAATGGAAAGCTGCCCTTCCTCTTCAAAGTACTGTCAGTGGACACGGCCCTGTCTATCCAGGCACACCCTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034856.15 ENSMUST00000156428.2 |
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| CDS CAA 90 bp | CCTTGGACCATCAGAAGGATGCTGGCAGAGTCTAGTGTTGAGACTTaGTATTCAGTGACAGAGCTAGGGACCTCCATCTTCATAACAGTG | + |
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Preference number: 6 (lower is better) Translates to: PWTIRRMLAESSVET*YSVTELGTSIFITV Trigger: CACTGTTATGAAGATGGAGGTCCCTAGCTCTGTCACTGAATACAAAGTCTCAACACTAGACTCTGCCAGCATCCTTCTGATGGTCCAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS CAA 90 bp | ATCAGCAGATCCTTGGGCACAGTAATCTTCAGTAAGACACTCTCATaGGCTGCAATGAAGAGCACTCCACCACGGTACAGAGGGATTTCT | + |
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Preference number: 6 (lower is better) Translates to: ISRSLGTVIFSKTLS*AAMKSTPPRYRGIS Trigger: AGAAATCCCTCTGTACCGTGGTGGAGTGCTCTTCATTGCAGCCAATGAGAGTGTCTTACTGAAGATTACTGTGCCCAAGGATCTGCTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS CCA 72 bp | TTCAGCTGTGCTGTGGCATCATCTCCAATCAGCAACTaGAACTCAGGCACCTTCTTCATAAAGGTCACAATC | + |
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Preference number: 6 (lower is better) Translates to: FSCAVASSPISN*NSGTFFIKVTI Trigger: GATTGTGACCTTTATGAAGAAGGTGCCTGAGTTCCAGTTGCTGATTGGAGATGATGCCACAGCACAGCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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| CDS CAA 72 bp | TTGAAGAGGAAGGGCAGCTTTCCATTAAAGGTGTTTTaGACCTTTGAGCCCAAGCAGTCCGGGTTTTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LKRKGSFPLKVF*TFEPKQSGFSA Trigger: TGCTGAAAACCCGGACTGCTTGGGCTCAAAGGTCAAAAACACCTTTAATGGAAAGCTGCCCTTCCTCTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034856.15 ENSMUST00000156428.2 |
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| CDS CAA 72 bp | ATCAGAAGGATGCTGGCAGAGTCTAGTGTTGAGACTTaGTATTCAGTGACAGAGCTAGGGACCTCCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: IRRMLAESSVET*YSVTELGTSIF Trigger: GAAGATGGAGGTCCCTAGCTCTGTCACTGAATACAAAGTCTCAACACTAGACTCTGCCAGCATCCTTCTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034856.15 |
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