RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MPHOSPH9 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000038126

Ensembl transcript IDs: ENSMUST00000031344.13, ENSMUST00000130502.8, ENSMUST00000141203.8, ENSMUST00000147737.8, ENSMUST00000184951.8

Found 547 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTGCAGGGCCATGTGCCTGCACCACAGAGGCTGGGTGCTGCCCCTaGGAAGCTGCCCCCGGCTCCAAGGGCTCGGTGGGCTCCTTAGCC +
Preference number: 1 (lower is better)
Translates to: PAGPCACTTEAGCCP*EAAPGSKGSVGSLA
Trigger: GGCTAAGGAGCCCACCGAGCCCTTGGAGCCGGGGGCAGCTTCCCAGGGGCAGCACCCAGCCTCTGTGGTGCAGGCACATGGCCCTGCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR GCA 90 bp GCCATGTGCCTGCACCACAGAGGCTGGGTGCTGCCCCTGGGAAGCTaGCCCCGGCTCCAAGGGCTCGGTGGGCTCCTTAGCCTTGTGGGT +
Preference number: 1 (lower is better)
Translates to: AMCLHHRGWVLPLGS*PRLQGLGGLLSLVG
Trigger: ACCCACAAGGCTAAGGAGCCCACCGAGCCCTTGGAGCCGGGGGCAGCTTCCCAGGGGCAGCACCCAGCCTCTGTGGTGCAGGCACATGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR GCA 90 bp CTGTGTGAAGAAGTTTATGGCTGCTGCACCCCCTGCAGGGCCATGTaGCTGCACCACAGAGGCTGGGTGCTGCCCCTGGGAAGCTGCCCC +
Preference number: 1 (lower is better)
Translates to: LCEEVYGCCTPCRAM*LHHRGWVLPLGSCP
Trigger: GGGGCAGCTTCCCAGGGGCAGCACCCAGCCTCTGTGGTGCAGGCACATGGCCCTGCAGGGGGTGCAGCAGCCATAAACTTCTTCACACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR GCA 90 bp GGCACAAAGCTCTTCAGGGGTCTGTGTGAAGAAGTTTATGGCTGCTaGACCCCCTGCAGGGCCATGTGCCTGCACCACAGAGGCTGGGTG +
Preference number: 1 (lower is better)
Translates to: GTKLFRGLCEEVYGC*TPCRAMCLHHRGWV
Trigger: CACCCAGCCTCTGTGGTGCAGGCACATGGCCCTGCAGGGGGTGCAGCAGCCATAAACTTCTTCACACAGACCCCTGAAGAGCTTTGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR CCA 90 bp CGGATCTGCCTATGGAACTGCTCCTGCTGGGCGACAATCTGCTCCTaGCAGTGCTGCTCAACCACACTGAAGAGCTGCAACCACCTGGCC +
Preference number: 1 (lower is better)
Translates to: RICLWNCSCWATICS*QCCSTTLKSCNHLA
Trigger: GGCCAGGTGGTTGCAGCTCTTCAGTGTGGTTGAGCAGCACTGCCAGGAGCAGATTGTCGCCCAGCAGGAGCAGTTCCATAGGCAGATCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR CCA 90 bp CCTGGGGTCCAGAGGCTGCCCAGTAAAGATGGAGTACTCCGCTCCTaGAATCAGCCACTTCCTCCTGCTGACATCCGAGGTGGCTACGGA +
Preference number: 1 (lower is better)
Translates to: PGVQRLPSKDGVLRS*NQPLPPADIRGGYG
Trigger: TCCGTAGCCACCTCGGATGTCAGCAGGAGGAAGTGGCTGATTCCAGGAGCGGAGTACTCCATCTTTACTGGGCAGCCTCTGGACCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR GCA 90 bp AGAGGCACAAAGCTCTTCAGGGGTCTGTGTGAAGAAGTTTATGGCTaGTGCACCCCCTGCAGGGCCATGTGCCTGCACCACAGAGGCTGG +
Preference number: 1 (lower is better)
Translates to: RGTKLFRGLCEEVYG*CTPCRAMCLHHRGW
Trigger: CCAGCCTCTGTGGTGCAGGCACATGGCCCTGCAGGGGGTGCAGCAGCCATAAACTTCTTCACACAGACCCCTGAAGAGCTTTGTGCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR GCA 90 bp GAAAGCCATGGGCTTGGATCCCTGCGACATGCTCCTTTGGCTTCATaGGTATGGCTCCTGGATCAAGAGTCAGGACCTGGCTCAGGGGCC +
Preference number: 1 (lower is better)
Translates to: ESHGLGSLRHAPLAS*VWLLDQESGPGSGA
Trigger: GGCCCCTGAGCCAGGTCCTGACTCTTGATCCAGGAGCCATACGCATGAAGCCAAAGGAGCATGTCGCAGGGATCCAAGCCCATGGCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR GCA 90 bp CTATGGAACTGCTCCTGCTGGGCGACAATCTGCTCCTGGCAGTGCTaGTCAACCACACTGAAGAGCTGCAACCACCTGGCCTCGCAACTC +
Preference number: 1 (lower is better)
Translates to: LWNCSCWATICSWQC*STTLKSCNHLASQL
Trigger: GAGTTGCGAGGCCAGGTGGTTGCAGCTCTTCAGTGTGGTTGAGCAGCACTGCCAGGAGCAGATTGTCGCCCAGCAGGAGCAGTTCCATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR GCA 90 bp TGCCTATGGAACTGCTCCTGCTGGGCGACAATCTGCTCCTGGCAGTaGTGCTCAACCACACTGAAGAGCTGCAACCACCTGGCCTCGCAA +
Preference number: 1 (lower is better)
Translates to: CLWNCSCWATICSWQ*CSTTLKSCNHLASQ
Trigger: TTGCGAGGCCAGGTGGTTGCAGCTCTTCAGTGTGGTTGAGCAGCACTGCCAGGAGCAGATTGTCGCCCAGCAGGAGCAGTTCCATAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR GCA 90 bp CGGATCTCCTCCTGTATTCGCCGGATCTGCCTATGGAACTGCTCCTaGTGGGCGACAATCTGCTCCTGGCAGTGCTGCTCAACCACACTG +
Preference number: 1 (lower is better)
Translates to: RISSCIRRICLWNCS*WATICSWQCCSTTL
Trigger: CAGTGTGGTTGAGCAGCACTGCCAGGAGCAGATTGTCGCCCAGCAGGAGCAGTTCCATAGGCAGATCCGGCGAATACAGGAGGAGATCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR CCA 90 bp CATGGGCTTGGATCCCTGCGACATGCTCCTTTGGCTTCATGCGTATaGCTCCTGGATCAAGAGTCAGGACCTGGCTCAGGGGCCTCTCTG +
Preference number: 1 (lower is better)
Translates to: HGLGSLRHAPLASCV*LLDQESGPGSGASL
Trigger: CAGAGAGGCCCCTGAGCCAGGTCCTGACTCTTGATCCAGGAGCCATACGCATGAAGCCAAAGGAGCATGTCGCAGGGATCCAAGCCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR TCA 90 bp GCTCACTCACAGAGCTGCTGCTGCACGAAGGCCGGGAAGCATGGCTaGGCTGCAGTTTCACTAACTTCCGGATCTCCTCCTGTATTCGCC +
Preference number: 1 (lower is better)
Translates to: AHSQSCCCTKAGKHG*AAVSLTSGSPPVFA
Trigger: GGCGAATACAGGAGGAGATCCGGAAGTTAGTGAAACTGCAGCTCAGCCATGCTTCCCGGCCTTCGTGCAGCAGCAGCTCTGTGAGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR GCA 90 bp ATTCGCCGGATCTGCCTATGGAACTGCTCCTGCTGGGCGACAATCTaGTCCTGGCAGTGCTGCTCAACCACACTGAAGAGCTGCAACCAC +
Preference number: 1 (lower is better)
Translates to: IRRICLWNCSCWATI*SWQCCSTTLKSCNH
Trigger: GTGGTTGCAGCTCTTCAGTGTGGTTGAGCAGCACTGCCAGGAGCAGATTGTCGCCCAGCAGGAGCAGTTCCATAGGCAGATCCGGCGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR GCA 90 bp AACTTCCGGATCTCCTCCTGTATTCGCCGGATCTGCCTATGGAACTaGTCCTGCTGGGCGACAATCTGCTCCTGGCAGTGCTGCTCAACC +
Preference number: 1 (lower is better)
Translates to: NFRISSCIRRICLWN*SCWATICSWQCCST
Trigger: GGTTGAGCAGCACTGCCAGGAGCAGATTGTCGCCCAGCAGGAGCAGTTCCATAGGCAGATCCGGCGAATACAGGAGGAGATCCGGAAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR CCA 90 bp TCCTTTGGCTTCATGCGTATGGCTCCTGGATCAAGAGTCAGGACCTaGCTCAGGGGCCTCTCTGCTGGGGATGGTGCAAACGTCTTCTCC +
Preference number: 1 (lower is better)
Translates to: SFGFMRMAPGSRVRT*LRGLSAGDGANVFS
Trigger: GGAGAAGACGTTTGCACCATCCCCAGCAGAGAGGCCCCTGAGCCAGGTCCTGACTCTTGATCCAGGAGCCATACGCATGAAGCCAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR TCA 90 bp GCTCACTCACAGAGCTGCTGCTGCACGAAGGCCGGGAAGCATGGCTaGGCTGCAGTTTCACTAACTTCCGGATCTCCTCCTGTATTCGCT +
Preference number: 1 (lower is better)
Translates to: AHSQSCCCTKAGKHG*AAVSLTSGSPPVFA
Trigger: AGCGAATACAGGAGGAGATCCGGAAGTTAGTGAAACTGCAGCTCAGCCATGCTTCCCGGCCTTCGTGCAGCAGCAGCTCTGTGAGTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141203.8
3UTR GCA 90 bp TCCTCCAGCTGCTTATCTAGCTTCCTGTCCCTGGGGTCCAGAGGCTaGCCAGTAAAGATGGAGTACTCCGCTCCTGGAATCAGCCACTTC +
Preference number: 1 (lower is better)
Translates to: SSSCLSSFLSLGSRG*PVKMEYSAPGISHF
Trigger: GAAGTGGCTGATTCCAGGAGCGGAGTACTCCATCTTTACTGGGCAGCCTCTGGACCCCAGGGACAGGAAGCTAGATAAGCAGCTGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR GCA 90 bp CTCACAGAGCTGCTGCTGCACGAAGGCCGGGAAGCATGGCTGAGCTaGAGTTTCACTAACTTCCGGATCTCCTCCTGTATTCGCTCGCAA +
Preference number: 1 (lower is better)
Translates to: LTELLLHEGREAWLS*SFTNFRISSCIRSQ
Trigger: TTGCGAGCGAATACAGGAGGAGATCCGGAAGTTAGTGAAACTGCAGCTCAGCCATGCTTCCCGGCCTTCGTGCAGCAGCAGCTCTGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141203.8
3UTR CCA 90 bp GGCTCCTGGATCAAGAGTCAGGACCTGGCTCAGGGGCCTCTCTGCTaGGGATGGTGCAAACGTCTTCTCCAAAGTTTCAGGCAAAGAGTG +
Preference number: 1 (lower is better)
Translates to: GSWIKSQDLAQGPLC*GWCKRLLQSFRQRV
Trigger: CACTCTTTGCCTGAAACTTTGGAGAAGACGTTTGCACCATCCCCAGCAGAGAGGCCCCTGAGCCAGGTCCTGACTCTTGATCCAGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR CCA 90 bp TTCACTAACTTCCGGATCTCCTCCTGTATTCGCCGGATCTGCCTATaGAACTGCTCCTGCTGGGCGACAATCTGCTCCTGGCAGTGCTGC +
Preference number: 1 (lower is better)
Translates to: FTNFRISSCIRRICL*NCSCWATICSWQCC
Trigger: GCAGCACTGCCAGGAGCAGATTGTCGCCCAGCAGGAGCAGTTCCATAGGCAGATCCGGCGAATACAGGAGGAGATCCGGAAGTTAGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR TCA 90 bp GGAGCCACCCTGGGAACAGCCCAAGATGGGTCACAATGTAAAGCATaGATGACGCACGGGCAGAAAACCCAGCTATCCACCTGCCACTTC +
Preference number: 1 (lower is better)
Translates to: GATLGTAQDGSQCKA*MTHGQKTQLSTCHF
Trigger: GAAGTGGCAGGTGGATAGCTGGGTTTTCTGCCCGTGCGTCATTCATGCTTTACATTGTGACCCATCTTGGGCTGTTCCCAGGGTGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
ENSMUST00000184951.8
3UTR TCA 90 bp GCGACTCCTGGAGCCATCCCTCAAAGCTCCCGCAGAGTGGCTTTGTaGGAAGAGAGGGGCACAGCTCCACAGCTGGAGAGTTTATTTTCT +
Preference number: 1 (lower is better)
Translates to: ATPGAIPQSSRRVAL*EERGTAPQLESLFS
Trigger: AGAAAATAAACTCTCCAGCTGTGGAGCTGTGCCCCTCTCTTCTCACAAAGCCACTCTGCGGGAGCTTTGAGGGATGGCTCCAGGAGTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR GCA 90 bp TGCAGTTTCACTAACTTCCGGATCTCCTCCTGTATTCGCCGGATCTaGCTATGGAACTGCTCCTGCTGGGCGACAATCTGCTCCTGGCAG +
Preference number: 1 (lower is better)
Translates to: CSFTNFRISSCIRRI*LWNCSCWATICSWQ
Trigger: CTGCCAGGAGCAGATTGTCGCCCAGCAGGAGCAGTTCCATAGGCAGATCCGGCGAATACAGGAGGAGATCCGGAAGTTAGTGAAACTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR CCA 90 bp AGCATGCAGAAAGCCATGGGCTTGGATCCCTGCGACATGCTCCTTTaGCTTCATGCGTATGGCTCCTGGATCAAGAGTCAGGACCTGGCT +
Preference number: 1 (lower is better)
Translates to: SMQKAMGLDPCDMLL*LHAYGSWIKSQDLA
Trigger: AGCCAGGTCCTGACTCTTGATCCAGGAGCCATACGCATGAAGCCAAAGGAGCATGTCGCAGGGATCCAAGCCCATGGCTTTCTGCATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR CCA 90 bp ACCTGCTCACTCACAGAGCTGCTGCTGCACGAAGGCCGGGAAGCATaGCTGAGCTGCAGTTTCACTAACTTCCGGATCTCCTCCTGTATT +
Preference number: 1 (lower is better)
Translates to: TCSLTELLLHEGREA*LSCSFTNFRISSCI
Trigger: AATACAGGAGGAGATCCGGAAGTTAGTGAAACTGCAGCTCAGCCATGCTTCCCGGCCTTCGTGCAGCAGCAGCTCTGTGAGTGAGCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR GCA 90 bp TCACTGTTCTCAGAAAAGAAGCCCATTTGGGTTTCTGCAGACACCTaGTCACTCACAGAGCTGCTGCTGCACGAAGGCCGGGAAGCATGG +
Preference number: 1 (lower is better)
Translates to: SLFSEKKPIWVSADT*SLTELLLHEGREAW
Trigger: CCATGCTTCCCGGCCTTCGTGCAGCAGCAGCTCTGTGAGTGAGCAGGTGTCTGCAGAAACCCAAATGGGCTTCTTTTCTGAGAACAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR GCA 90 bp TCGCTCCCTGGCTTAGGTCCTGAGCAGTCATCCTCTGTATGTGCCTaGTTTGACTGGTTCTGCTTCAGCCTCTGTGCCCAGGATGTTACA +
Preference number: 1 (lower is better)
Translates to: SLPGLGPEQSSSVCA*FDWFCFSLCAQDVT
Trigger: TGTAACATCCTGGGCACAGAGGCTGAAGCAGAACCAGTCAAAGCAGGCACATACAGAGGATGACTGCTCAGGACCTAAGCCAGGGAGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR GCA 90 bp TATGGCTCCTGGATCAAGAGTCAGGACCTGGCTCAGGGGCCTCTCTaGTGGGGATGGTGCAAACGTCTTCTCCAAAGTTTCAGGCAAAGA +
Preference number: 1 (lower is better)
Translates to: YGSWIKSQDLAQGPL*WGWCKRLLQSFRQR
Trigger: TCTTTGCCTGAAACTTTGGAGAAGACGTTTGCACCATCCCCAGCAGAGAGGCCCCTGAGCCAGGTCCTGACTCTTGATCCAGGAGCCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR GCA 90 bp TCGTCAAGAGCATGCAGAAAGCCATGGGCTTGGATCCCTGCGACATaGTCCTTTGGCTTCATGCGTATGGCTCCTGGATCAAGAGTCAGG +
Preference number: 1 (lower is better)
Translates to: SSRACRKPWAWIPAT*SFGFMRMAPGSRVR
Trigger: CCTGACTCTTGATCCAGGAGCCATACGCATGAAGCCAAAGGAGCATGTCGCAGGGATCCAAGCCCATGGCTTTCTGCATGCTCTTGACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR GCA 90 bp GCACGAAGGTCGGCCACGTGTCGGGCATGCTTCTCCTTGAGGTTCTaGCTGATCTTAGACAACATCACAGGATCTTCCAGGGAAGCCAAT +
Preference number: 1 (lower is better)
Translates to: ARRSATCRACFSLRF*LILDNITGSSREAN
Trigger: ATTGGCTTCCCTGGAAGATCCTGTGATGTTGTCTAAGATCAGGCAGAACCTCAAGGAGAAGCATGCCCGACACGTGGCCGACCTTCGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
3UTR GCA 90 bp TTTTCTGGAGGAGAATGGTATCCAGGAACAAGGGCTTCCTCCAGCTaGTTATCTAGCTTCCTGTCCCTGGGGTCCAGAGGCTGCCCAGTA +
Preference number: 1 (lower is better)
Translates to: FSGGEWYPGTRASSS*LSSFLSLGSRGCPV
Trigger: TACTGGGCAGCCTCTGGACCCCAGGGACAGGAAGCTAGATAAGCAGCTGGAGGAAGCCCTTGTTCCTGGATACCATTCTCCTCCAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR CCA 90 bp GACGACGACCTTTGTGAAGCCGAAGTCTGTCTCTTCGGTCTCTGCTaGGCACATTTCTCTGGGGAACGGCCTGTATTGACTGAAGGCTCA +
Preference number: 1 (lower is better)
Translates to: DDDLCEAEVCLFGLC*AHFSGERPVLTEGS
Trigger: TGAGCCTTCAGTCAATACAGGCCGTTCCCCAGAGAAATGTGCCCAGCAGAGACCGAAGAGACAGACTTCGGCTTCACAAAGGTCGTCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR GCA 90 bp TCCAGAACGGAGTCTGGGGAAAAGGATATTCTGTCGTCAAGAGCATaGAGAAAGCCATGGGCTTGGATCCCTGCGACATGCTCCTTTGGC +
Preference number: 1 (lower is better)
Translates to: SRTESGEKDILSSRA*RKPWAWIPATCSFG
Trigger: GCCAAAGGAGCATGTCGCAGGGATCCAAGCCCATGGCTTTCTGCATGCTCTTGACGACAGAATATCCTTTTCCCCAGACTCCGTTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR CCA 90 bp TGTCTGCAGACTCAGAGCACAAATATGTGGGTGCTGGGTTCGCACTaGTCACCAGAAAGTGAGTGGGTGAGCAGCCCAGACATCACCAAT +
Preference number: 1 (lower is better)
Translates to: CLQTQSTNMWVLGSH*SPESEWVSSPDITN
Trigger: ATTGGTGATGTCTGGGCTGCTCACCCACTCACTTTCTGGTGACCAGTGCGAACCCAGCACCCACATATTTGTGCTCTGAGTCTGCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
ENSMUST00000184951.8
3UTR TCA 90 bp GGGAACACACATCCTCTGTCCATTACCAGGCAGGGTAGAGTGCTCTaGGCGCAGACCAATGGCTCTTACCGTGGAAGTGCTTTTCTCTTT +
Preference number: 1 (lower is better)
Translates to: GNTHPLSITRQGRVL*AQTNGSYRGSAFLF
Trigger: AAAGAGAAAAGCACTTCCACGGTAAGAGCCATTGGTCTGCGCTCAGAGCACTCTACCCTGCCTGGTAATGGACAGAGGATGTGTGTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
ENSMUST00000184951.8
3UTR GCA 90 bp TATTCTGTCGTCAAGAGCATGCAGAAAGCCATGGGCTTGGATCCCTaGGACATGCTCCTTTGGCTTCATGCGTATGGCTCCTGGATCAAG +
Preference number: 1 (lower is better)
Translates to: YSVVKSMQKAMGLDP*DMLLWLHAYGSWIK
Trigger: CTTGATCCAGGAGCCATACGCATGAAGCCAAAGGAGCATGTCGCAGGGATCCAAGCCCATGGCTTTCTGCATGCTCTTGACGACAGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR CCA 90 bp TGGATCAAGAGTCAGGACCTGGCTCAGGGGCCTCTCTGCTGGGGATaGTGCAAACGTCTTCTCCAAAGTTTCAGGCAAAGAGTGATACAT +
Preference number: 1 (lower is better)
Translates to: WIKSQDLAQGPLCWG*CKRLLQSFRQRVIH
Trigger: ATGTATCACTCTTTGCCTGAAACTTTGGAGAAGACGTTTGCACCATCCCCAGCAGAGAGGCCCCTGAGCCAGGTCCTGACTCTTGATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR TCA 90 bp TGGATGATGCTGGCTGTGTCTCGGGTTCCTTGGACGCTGGGGAACTaGCAACAGACTCATTTCTCTCACTGTTCTCAGAAAAGAAGCCCA +
Preference number: 1 (lower is better)
Translates to: WMMLAVSRVPWTLGN*QQTHFSHCSQKRSP
Trigger: TGGGCTTCTTTTCTGAGAACAGTGAGAGAAATGAGTCTGTTGTCAGTTCCCCAGCGTCCAAGGAACCCGAGACACAGCCAGCATCATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR TCA 90 bp GAAATGCATTCTGGGACACTGTTGGCTGTACCTGGAAGCTGGGACTaGCTGACTGAGGCCACTGTGACAGTGTTCTCTTCGTCTACAGTT +
Preference number: 1 (lower is better)
Translates to: EMHSGTLLAVPGSWD*LTEATVTVFSSSTV
Trigger: AACTGTAGACGAAGAGAACACTGTCACAGTGGCCTCAGTCAGTCAGTCCCAGCTTCCAGGTACAGCCAACAGTGTCCCAGAATGCATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR GCA 90 bp GAGGGTGAAACTGTTCCGACGATGACTTTGGGAGCTAAAGCTTTATaGTTAATGGAAACTGGAGCCACCCTGGGAACAGCCCAAGATGGG +
Preference number: 1 (lower is better)
Translates to: EGETVPTMTLGAKAL*LMETGATLGTAQDG
Trigger: CCCATCTTGGGCTGTTCCCAGGGTGGCTCCAGTTTCCATTAAGCATAAAGCTTTAGCTCCCAAAGTCATCGTCGGAACAGTTTCACCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
ENSMUST00000184951.8
3UTR CCA 90 bp GAAAAGGATATTCTGTCGTCAAGAGCATGCAGAAAGCCATGGGCTTaGATCCCTGCGACATGCTCCTTTGGCTTCATGCGTATGGCTCCT +
Preference number: 1 (lower is better)
Translates to: EKDILSSRACRKPWA*IPATCSFGFMRMAP
Trigger: AGGAGCCATACGCATGAAGCCAAAGGAGCATGTCGCAGGGATCCAAGCCCATGGCTTTCTGCATGCTCTTGACGACAGAATATCCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR CCA 90 bp TCTGGGGAAAAGGATATTCTGTCGTCAAGAGCATGCAGAAAGCCATaGGCTTGGATCCCTGCGACATGCTCCTTTGGCTTCATGCGTATG +
Preference number: 1 (lower is better)
Translates to: SGEKDILSSRACRKP*AWIPATCSFGFMRM
Trigger: CATACGCATGAAGCCAAAGGAGCATGTCGCAGGGATCCAAGCCCATGGCTTTCTGCATGCTCTTGACGACAGAATATCCTTTTCCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR CCA 90 bp GTCAGTGTCAGAGTGACGAGACAGGCTTGGTTCCAGAACGGAGTCTaGGGAAAAGGATATTCTGTCGTCAAGAGCATGCAGAAAGCCATG +
Preference number: 1 (lower is better)
Translates to: VSVRVTRQAWFQNGV*GKGYSVVKSMQKAM
Trigger: CATGGCTTTCTGCATGCTCTTGACGACAGAATATCCTTTTCCCCAGACTCCGTTCTGGAACCAAGCCTGTCTCGTCACTCTGACACTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR CCA 90 bp CGTGAAGGGATGGTGGAGCTGGTCCTACTTTCCCTTTGGAATGCATaGTTTTTCCAAGTGTCCACAGGTGATGCTCTCGTGGTTGAAGGA +
Preference number: 1 (lower is better)
Translates to: REGMVELVLLSLWNA*FFQVSTGDALVVEG
Trigger: TCCTTCAACCACGAGAGCATCACCTGTGGACACTTGGAAAAACCATGCATTCCAAAGGGAAAGTAGGACCAGCTCCACCATCCCTTCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR TCA 90 bp CTGCCTGATCTTAGACAACATCACAGGATCTTCCAGGGAAGCCAATaGAATGCATTCTGGGACACTGTTGGCTGTACCTGGAAGCTGGGA +
Preference number: 1 (lower is better)
Translates to: LPDLRQHHRIFQGSQ*NAFWDTVGCTWKLG
Trigger: TCCCAGCTTCCAGGTACAGCCAACAGTGTCCCAGAATGCATTTCATTGGCTTCCCTGGAAGATCCTGTGATGTTGTCTAAGATCAGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
3UTR CCA 90 bp CTCGCTGGTGAACTTCCAAGTGAAGAGTCCTTTTCTGGAGGAGAATaGTATCCAGGAACAAGGGCTTCCTCCAGCTGCTTATCTAGCTTC +
Preference number: 1 (lower is better)
Translates to: LAGELPSEESFSGGE*YPGTRASSSCLSSF
Trigger: GAAGCTAGATAAGCAGCTGGAGGAAGCCCTTGTTCCTGGATACCATTCTCCTCCAGAAAAGGACTCTTCACTTGGAAGTTCACCAGCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR TCA 90 bp TTCCTGAATCAGACAACCAAGAACTTGGGCTTTCGGCTGGCTTATTaGTGTAAAAGGCACAAGGACGTGCAGCATCGGCAGCAAGGTCAA +
Preference number: 1 (lower is better)
Translates to: FLNQTTKNLGFRLAY*CKRHKDVQHRQQGQ
Trigger: TTGACCTTGCTGCCGATGCTGCACGTCCTTGTGCCTTTTACATCAATAAGCCAGCCGAAAGCCCAAGTTCTTGGTTGTCTGATTCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR TCA 90 bp CAAACCAAAATCAAAAGCCTGAGCCCTGGCCCTGTAAATCAACTGTaGGAGCTCAGACGACTCTGTCTGCAGACTCAGAGCACAAATATG +
Preference number: 1 (lower is better)
Translates to: QTKIKSLSPGPVNQL*ELRRLCLQTQSTNM
Trigger: CATATTTGTGCTCTGAGTCTGCAGACAGAGTCGTCTGAGCTCTCACAGTTGATTTACAGGGCCAGGGCTCAGGCTTTTGATTTTGGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
3UTR TCA 90 bp CGCCCGTGTTCTTTGCCGAGGGATTCGTACTCTCCTAAGAGATCCTaGAACATCTTGTTTTCTTGTCTCAGCCTCGCTTCCTTATCATCT +
Preference number: 1 (lower is better)
Translates to: RPCSLPRDSYSPKRS*NILFSCLSLASLSS
Trigger: AGATGATAAGGAAGCGAGGCTGAGACAAGAAAACAAGATGTTTCAGGATCTCTTAGGAGAGTACGAATCCCTCGGCAAAGAACACGGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR TCA 90 bp TCTTCGGTCTCTGCTGGGCACATTTCTCTGGGGAACGGCCTGTATTaGCTGAAGGCTCAGTTTGCCGAGAATTCACTAATTTACTTGAAG +
Preference number: 1 (lower is better)
Translates to: SSVSAGHISLGNGLY*LKAQFAENSLIYLK
Trigger: CTTCAAGTAAATTAGTGAATTCTCGGCAAACTGAGCCTTCAGTCAATACAGGCCGTTCCCCAGAGAAATGTGCCCAGCAGAGACCGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR TCA 90 bp CTTCTCCCAGGCTTGTCTCGTGGACACTTTCTTCAGTCCATTTGGTaGGTGTTCAGGACAAGAGCTAGGATTAACAGGGTCATCACTGTT +
Preference number: 1 (lower is better)
Translates to: LLPGLSRGHFLQSIW*VFRTRARINRVITV
Trigger: AACAGTGATGACCCTGTTAATCCTAGCTCTTGTCCTGAACACTCACCAAATGGACTGAAGAAAGTGTCCACGAGACAAGCCTGGGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR CCA 90 bp TTTTCCAAGTGTCCACAGGTGATGCTCTCGTGGTTGAAGGATACTTaGAGAACCCAGACACCTGGGAAGGATTATGACTTGCTTGTGAAG +
Preference number: 1 (lower is better)
Translates to: FSKCPQVMLSWLKDT*RTQTPGKDYDLLVK
Trigger: CTTCACAAGCAAGTCATAATCCTTCCCAGGTGTCTGGGTTCTCCAAGTATCCTTCAACCACGAGAGCATCACCTGTGGACACTTGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR TCA 90 bp ATACATGTCCTTCTCCTCCAGTTTCCAGTAAGTCAGCCCTGTTCCTaGATCAGACAACCAAGAACTTGGGCTTTCGGCTGGCTTATTGAT +
Preference number: 1 (lower is better)
Translates to: IHVLLLQFPVSQPCS*IRQPRTWAFGWLID
Trigger: ATCAATAAGCCAGCCGAAAGCCCAAGTTCTTGGTTGTCTGATTCAGGAACAGGGCTGACTTACTGGAAACTGGAGGAGAAGGACATGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR TCA 90 bp TCTCGAAGGCTTCCTCCAGATCCTGCAGGCGACACTTTAGCCGAGTaGTGGTGTTATCTTTCTCCTTATTGCTTGTCCTCATTTCTTCAA +
Preference number: 1 (lower is better)
Translates to: SRRLPPDPAGDTLAE*WCYLSPYCLSSFLQ
Trigger: TTGAAGAAATGAGGACAAGCAATAAGGAGAAAGATAACACCATCACTCGGCTAAAGTGTCGCCTGCAGGATCTGGAGGAAGCCTTCGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR CCA 90 bp AGTGTGCGCACTCGACTAGTAGCTTCATTCAATGCACTATCCAGCTaGCCACACCTGTCCGCAAGAATTTCATTTTTCTTCTTCCACTCT +
Preference number: 1 (lower is better)
Translates to: SVRTRLVASFNALSS*PHLSARISFFFFHS
Trigger: AGAGTGGAAGAAGAAAAATGAAATTCTTGCGGACAGGTGTGGCCAGCTGGATAGTGCATTGAATGAAGCTACTAGTCGAGTGCGCACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
3UTR TCA 90 bp ACCTTAAACAGGTCTTCAGGCTTAGCGGCAAGCACTTTTACCTGCTaGACCTTCTTGCTGGCCCAATTATTCTACTATTCAAGGCATGTG +
Preference number: 1 (lower is better)
Translates to: TLNRSSGLAASTFTC*TFLLAQLFYYSRHV
Trigger: CACATGCCTTGAATAGTAGAATAATTGGGCCAGCAAGAAGGTTCAGCAGGTAAAAGTGCTTGCCGCTAAGCCTGAAGACCTGTTTAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
ENSMUST00000184951.8
3UTR TCA 90 bp TTTAATGGCTACCAGTCTCAAAGATTTGCAGAGCTGCGCAAAACATaGAACTTCTTGAGGGTCATTCGAACTGAGCCCAGTTCACGGTTG +
Preference number: 1 (lower is better)
Translates to: FNGYQSQRFAELRKT*NFLRVIRTEPSSRL
Trigger: CAACCGTGAACTGGGCTCAGTTCGAATGACCCTCAAGAAGTTTCATGTTTTGCGCAGCTCTGCAAATCTTTGAGACTGGTAGCCATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR TCA 90 bp ATATACATACTTAGACAACATCACAGGATCTTCCAGGGAAGCCAATaGAATGCATTCTGGGACACTGTTGGCTGTACCTGGAAGCTGGGA +
Preference number: 1 (lower is better)
Translates to: IYILRQHHRIFQGSQ*NAFWDTVGCTWKLG
Trigger: TCCCAGCTTCCAGGTACAGCCAACAGTGTCCCAGAATGCATTTCATTGGCTTCCCTGGAAGATCCTGTGATGTTGTCTAAGTATGTATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141203.8
3UTR GCA 90 bp GTTGTTCTTCTCAAGTGTGCGCACTCGACTAGTAGCTTCATTCAATaGACTATCCAGCTGGCCACACCTGTCCGCAAGAATTTCATTTTT +
Preference number: 1 (lower is better)
Translates to: VVLLKCAHSTSSFIQ*TIQLATPVRKNFIF
Trigger: AAAAATGAAATTCTTGCGGACAGGTGTGGCCAGCTGGATAGTGCATTGAATGAAGCTACTAGTCGAGTGCGCACACTTGAGAAGAACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
3UTR TCA 90 bp CTTCAATTCGTTCCTGCAAAACTTTGGAGGCACTGCTGGCTGCATTaGAGCGTTCTCTCAAGTCACTCACTTCTATTTCTAGCAAGTTGT +
Preference number: 1 (lower is better)
Translates to: LQFVPAKLWRHCWLH*SVLSSHSLLFLASC
Trigger: ACAACTTGCTAGAAATAGAAGTGAGTGACTTGAGAGAACGCTTCAATGCAGCCAGCAGTGCCTCCAAAGTTTTGCAGGAACGAATTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
3UTR GCA 90 bp CTGCTTCAGCCTCTGTGCCCAGGATGTTACAGACTTACCACTATTTaGTTTCCCACTGTACACTTCAGAGATCTTGTTTTCACCAAGAAA +
Preference number: 1 (lower is better)
Translates to: LLQPLCPGCYRLTTI*FPTVHFRDLVFTKK
Trigger: TTTCTTGGTGAAAACAAGATCTCTGAAGTGTACAGTGGGAAAGCAAATAGTGGTAAGTCTGTAACATCCTGGGCACAGAGGCTGAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR GCA 90 bp GCACATTTCTCTGGGGAACGGCCTGTATTGACTGAAGGCTCAGTTTaGCGAGAATTCACTAATTTACTTGAAGAATCCTCTTTCTCTGTC +
Preference number: 1 (lower is better)
Translates to: AHFSGERPVLTEGSV*REFTNLLEESSFSV
Trigger: GACAGAGAAAGAGGATTCTTCAAGTAAATTAGTGAATTCTCGGCAAACTGAGCCTTCAGTCAATACAGGCCGTTCCCCAGAGAAATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR CCA 90 bp CAATGTAGTGACTGTACAAAATCATCAACCTTAAAAAGAAATCACTaGGTTGGGAACATAGCTCAGTGGCAGAGTTGCCTAGCGTGTGCA +
Preference number: 1 (lower is better)
Translates to: QCSDCTKSSTLKRNH*VGNIAQWQSCLACA
Trigger: TGCACACGCTAGGCAACTCTGCCACTGAGCTATGTTCCCAACCCAGTGATTTCTTTTTAAGGTTGATGATTTTGTACAGTCACTACATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR CCA 90 bp TTTCTTCTGAGTCATCTAGCAGAAACTGGAGCTGCTTCTTTGCAGTaGTTTGTTGTAACGTGGACACAGGAACGGTATCTAAATCATCCA +
Preference number: 1 (lower is better)
Translates to: FLLSHLAETGAASLQ*FVVTWTQERYLNHP
Trigger: TGGATGATTTAGATACCGTTCCTGTGTCCACGTTACAACAAACCACTGCAAAGAAGCAGCTCCAGTTTCTGCTAGATGACTCAGAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR TCA 90 bp GAAAAATCAAGAATAAAGGCACTTGCTTCTAATGATAGGAAATCCTaGTTAAGCCAGCCTTCCCTAGTTACTGAAGAGGAGCTCAGGGGT +
Preference number: 1 (lower is better)
Translates to: EKSRIKALASNDRKS*LSQPSLVTEEELRG
Trigger: ACCCCTGAGCTCCTCTTCAGTAACTAGGGAAGGCTGGCTTAATCAGGATTTCCTATCATTAGAAGCAAGTGCCTTTATTCTTGATTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
3UTR CCA 90 bp CTAGCAGAAACTGGAGCTGCTTCTTTGCAGTGGTTTGTTGTAACGTaGACACAGGAACGGTATCTAAATCATCCAAAAGGATATCAAATC +
Preference number: 1 (lower is better)
Translates to: LAETGAASLQWFVVT*TQERYLNHPKGYQI
Trigger: GATTTGATATCCTTTTGGATGATTTAGATACCGTTCCTGTGTCCACGTTACAACAAACCACTGCAAAGAAGCAGCTCCAGTTTCTGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR CCA 90 bp GAATTTCATTTTTCTTCTTCCACTCTTCAACGGCAGAAATGTCTTTaGCCTCCAGTTTCTGTTTCAGACTACTTATCTCCGACTCATAAT +
Preference number: 1 (lower is better)
Translates to: EFHFSSSTLQRQKCL*PPVSVSDYLSPTHN
Trigger: ATTATGAGTCGGAGATAAGTAGTCTGAAACAGAAACTGGAGGCCAAAGACATTTCTGCCGTTGAAGAGTGGAAGAAGAAAAATGAAATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp GGTCTGTGTGAAGAAGTTTATGGCTGCTGCACCCCCTGCAGGGCCATGTGCCTGGCTGGGTGCTGCCCCTaGGAAGCTGCCCCCGGCTCC +
Preference number: 2 (lower is better)
Translates to: GLCEEVYGCCTPCRAMCLAGCCP*EAAPGS
Trigger: GGAGCCGGGGGCAGCTTCCCAGGGGCAGCACCCAGC...CAGGCACATGGCCCTGCAGGGGGTGCAGCAGCCATAAACTTCTTCACACAGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp TCTTCAGGGGTCTGTGTGAAGAAGTTTATGGCTGCTGCACCCCCTGCAGGGCCAACAGAGGCTGGGTGCTaGCCCTGGGAAGCTGCCCCC +
Preference number: 2 (lower is better)
Translates to: SSGVCVKKFMAAAPPAGPTEAGC*PWEAAP
Trigger: GGGGGCAGCTTCCCAGGGGCAGCACCCAGCCTCTGT...TGGCCCTGCAGGGGGTGCAGCAGCCATAAACTTCTTCACACAGACCCCTGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp CTTGGATCCCTGCGACATGCTCCTTTGGCTTCATGCGTATGGCTCCTGGATCAAGCTGGGTGCTGCCCCTaGGAAGCTGCCCCCGGCTCC +
Preference number: 2 (lower is better)
Translates to: LGSLRHAPLASCVWLLDQAGCCP*EAAPGS
Trigger: GGAGCCGGGGGCAGCTTCCCAGGGGCAGCACCCAGC...TTGATCCAGGAGCCATACGCATGAAGCCAAAGGAGCATGTCGCAGGGATCCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp TCTTCAGGGGTCTGTGTGAAGAAGTTTATGGCTGCTGCACCCCCTGCAGGGCCAACCACAGAGGCTGGGTaGTGCCCCTGGGAAGCTGCC +
Preference number: 2 (lower is better)
Translates to: SSGVCVKKFMAAAPPAGPTTEAG*CPWEAA
Trigger: GGCAGCTTCCCAGGGGCAGCACCCAGCCTCTGTGGT...TGGCCCTGCAGGGGGTGCAGCAGCCATAAACTTCTTCACACAGACCCCTGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp TCTTCAGGGGTCTGTGTGAAGAAGTTTATGGCTGCTGCACCCCCTGCAGGGCCACTGCACCACAGAGGCTaGGTGCTGCCCCTGGGAAGC +
Preference number: 2 (lower is better)
Translates to: SSGVCVKKFMAAAPPAGPLHHRG*VLPLGS
Trigger: GCTTCCCAGGGGCAGCACCCAGCCTCTGTGGTGCAG...TGGCCCTGCAGGGGGTGCAGCAGCCATAAACTTCTTCACACAGACCCCTGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR CAA 90 bp GGAATCAGCCACTTCCTCCTGCTGACATCCGAGGTGGCTACGGAGTaGGACCGGGACGGCCTCTCGGGAACTTTAGCGCCATTGCGAAGA +
Preference number: 2 (lower is better)
Translates to: GISHFLLLTSEVATE*DRDGLSGTLAPLRR
Trigger: TCTTCGCAATGGCGCTAAAGTTCCCGAGAGGCCGTCCCGGTCCAACTCCGTAGCCACCTCGGATGTCAGCAGGAGGAAGTGGCTGATTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR-3UTR TCA 90 bp ATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAGGGCCCTGGGGACAGGGTAGAGTGCTCTaGGCGCAGACCAATGGCTCT +
Preference number: 2 (lower is better)
Translates to: IREWHPGDGLKSAAGPWGQGRVL*AQTNGS
Trigger: AGAGCCATTGGTCTGCGCTCAGAGCACTCTACCCTG...TCCCCAGGGCCCTGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
ENSMUST00000184951.8
3UTR-3UTR GCA 90 bp TCTGTATGTGCCTGCTTTGACTGGTTCTGCTTCAGCCTCTGTGCCCAGGATGTTACAGAGGCTGGGTGCTaGCCCTGGGAAGCTGCCCCC +
Preference number: 2 (lower is better)
Translates to: SVCACFDWFCFSLCAQDVTEAGC*PWEAAP
Trigger: GGGGGCAGCTTCCCAGGGGCAGCACCCAGCCTCTGT...AACATCCTGGGCACAGAGGCTGAAGCAGAACCAGTCAAAGCAGGCACATACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp CTGTGTGAAGAAGTTTATGGCTGCTGCACCCCCTGCAGGGCCATGTGCCTGCACTGGAACTGCTCCTGCTaGGCGACAATCTGCTCCTGG +
Preference number: 2 (lower is better)
Translates to: LCEEVYGCCTPCRAMCLHWNCSC*ATICSW
Trigger: CCAGGAGCAGATTGTCGCCCAGCAGGAGCAGTTCCA...GTGCAGGCACATGGCCCTGCAGGGGGTGCAGCAGCCATAAACTTCTTCACACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR CAA 90 bp CTCTACACTGAGGAAAGCAGGCCTGAGCCAGGGTGTGGCCCGGGATaGTCTGGCTCCAAATCTCCCTTCTCTGGTCTCTATCAGCAGTGC +
Preference number: 2 (lower is better)
Translates to: LYTEESRPEPGCGPG*SGSKSPFSGLYQQC
Trigger: GCACTGCTGATAGAGACCAGAGAAGGGAGATTTGGAGCCAGACAATCCCGGGCCACACCCTGGCTCAGGCCTGCTTTCCTCAGTGTAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR-3UTR GCA 90 bp AGAGAGGCACAAAGCTCTTCAGGGGTCTGTGTGAAGAAGTTTATGGCTGCTGCAGGCTGCTGCACCCCCTaGAGGGCCATGTGCCTGCAC +
Preference number: 2 (lower is better)
Translates to: REAQSSSGVCVKKFMAAAGCCTP*RAMCLH
Trigger: GTGCAGGCACATGGCCCTGCAGGGGGTGCAGCAGCC...TGCAGCAGCCATAAACTTCTTCACACAGACCCCTGAAGAGCTTTGTGCCTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR CAA 90 bp GAGCATGCAGAAAGCCATGGGCTTGGATCCCTGCGACATGCTCCTTaGGCTTCATGCGTATGGCTCCTGGATCAAGAGTCAGGACCTGGC +
Preference number: 2 (lower is better)
Translates to: EHAESHGLGSLRHAP*ASCVWLLDQESGPG
Trigger: GCCAGGTCCTGACTCTTGATCCAGGAGCCATACGCATGAAGCCAAAGGAGCATGTCGCAGGGATCCAAGCCCATGGCTTTCTGCATGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp GGTCTGTGTGAAGAAGTTTATGGCTGCTGCACCCCCTGCAGGGCCATGTGCCTGGTTTCTGCAGACACCTaGTCACTCACAGAGCTGCTG +
Preference number: 2 (lower is better)
Translates to: GLCEEVYGCCTPCRAMCLVSADT*SLTELL
Trigger: CAGCAGCTCTGTGAGTGAGCAGGTGTCTGCAGAAAC...CAGGCACATGGCCCTGCAGGGGGTGCAGCAGCCATAAACTTCTTCACACAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp AGAGAGGCACAAAGCTCTTCAGGGGTCTGTGTGAAGAAGTTTATGGCTGCTGCAACCACAGAGGCTGGGTaGTGCCCCTGGGAAGCTGCC +
Preference number: 2 (lower is better)
Translates to: REAQSSSGVCVKKFMAAATTEAG*CPWEAA
Trigger: GGCAGCTTCCCAGGGGCAGCACCCAGCCTCTGTGGT...TGCAGCAGCCATAAACTTCTTCACACAGACCCCTGAAGAGCTTTGTGCCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp ACAGACAGGATACTTGCTGCTCCTAGCTGGGAACAGCTTCTCCTGCCCACACAGGAAGAAGTTTATGGCTaGTGCACCCCCTGCAGGGCC +
Preference number: 2 (lower is better)
Translates to: TDRILAAPSWEQLLLPTQEEVYG*CTPCRA
Trigger: GGCCCTGCAGGGGGTGCAGCAGCCATAAACTTCTTC...CTGTGTGGGCAGGAGAAGCTGTTCCCAGCTAGGAGCAGCAAGTATCCTGTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp TCCTATCCTTTGGTCTCTACACTGAGGAAAGCAGGCCTGAGCCAGGGTGTGGCCAAACTGGAGCCACCCTaGGAACAGCCCAAGATGGGT +
Preference number: 2 (lower is better)
Translates to: SYPLVSTLRKAGLSQGVAKLEPP*EQPKMG
Trigger: ACCCATCTTGGGCTGTTCCCAGGGTGGCTCCAGTTT...GGCCACACCCTGGCTCAGGCCTGCTTTCCTCAGTGTAGAGACCAAAGGATAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR-3UTR CCA 90 bp GTGCAAACGTCTTCTCCAAAGTTTCAGGCAAAGAGTGATACATGTCCTTCTCCTGCTGGGTGCTGCCCCTaGGAAGCTGCCCCCGGCTCC +
Preference number: 2 (lower is better)
Translates to: VQTSSPKFQAKSDTCPSPAGCCP*EAAPGS
Trigger: GGAGCCGGGGGCAGCTTCCCAGGGGCAGCACCCAGC...AGGAGAAGGACATGTATCACTCTTTGCCTGAAACTTTGGAGAAGACGTTTGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR TCA 90 bp GAGGGCCTAGGTTCAATTCCCAGCACTCACATGTCAGCTCACACCACCAATGCACAGGGTAGAGTGCTCTaGGCGCAGACCAATGGCTCT +
Preference number: 2 (lower is better)
Translates to: EGLGSIPSTHMSAHTTNAQGRVL*AQTNGS
Trigger: AGAGCCATTGGTCTGCGCTCAGAGCACTCTACCCTG...TGCATTGGTGGTGTGAGCTGACATGTGAGTGCTGGGAATTGAACCTAGGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR-3UTR TCA 90 bp GGTCTGTGTGAAGAAGTTTATGGCTGCTGCACCCCCTGCAGGGCCATGTGCCTGTGGACGCTGGGGAACTaGCAACAGACTCATTTCTCT +
Preference number: 2 (lower is better)
Translates to: GLCEEVYGCCTPCRAMCLWTLGN*QQTHFS
Trigger: AGAGAAATGAGTCTGTTGTCAGTTCCCCAGCGTCCA...CAGGCACATGGCCCTGCAGGGGGTGCAGCAGCCATAAACTTCTTCACACAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp GATGTGGATGATGCTGGCTGTGTCTCGGGTTCCTTGGACGCTGGGGAACTGACAGCCCATTTGGGTTTCTaGAGACACCTGCTCACTCAC +
Preference number: 2 (lower is better)
Translates to: DVDDAGCVSGSLDAGELTAHLGF*RHLLTH
Trigger: GTGAGTGAGCAGGTGTCTGCAGAAACCCAAATGGGC...TGTCAGTTCCCCAGCGTCCAAGGAACCCGAGACACAGCCAGCATCATCCACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp ACTTGGAGAACCCAGACACCTGGGAAGGATTATGACTTGCTTGTGAAGACGAGTGCAGGGCCATGTGCCTaGACCACAGAGGCTGGGTGC +
Preference number: 2 (lower is better)
Translates to: TWRTQTPGKDYDLLVKTSAGPCA*TTEAGC
Trigger: GCACCCAGCCTCTGTGGTGCAGGCACATGGCCCTGC...ACTCGTCTTCACAAGCAAGTCATAATCCTTCCCAGGTGTCTGGGTTCTCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp ACTTGGAGAACCCAGACACCTGGGAAGGATTATGACTTGCTTGTGAAGACGAGTCTGCACCACAGAGGCTaGGTGCTGCCCCTGGGAAGC +
Preference number: 2 (lower is better)
Translates to: TWRTQTPGKDYDLLVKTSLHHRG*VLPLGS
Trigger: GCTTCCCAGGGGCAGCACCCAGCCTCTGTGGTGCAG...ACTCGTCTTCACAAGCAAGTCATAATCCTTCCCAGGTGTCTGGGTTCTCCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp TGGGGAAAAGGATATTCTGTCGTCAAGAGCATGCAGAAAGCCATGGGCTTGGATCTGCACCACAGAGGCTaGGTGCTGCCCCTGGGAAGC +
Preference number: 2 (lower is better)
Translates to: WGKGYSVVKSMQKAMGLDLHHRG*VLPLGS
Trigger: GCTTCCCAGGGGCAGCACCCAGCCTCTGTGGTGCAG...ATCCAAGCCCATGGCTTTCTGCATGCTCTTGACGACAGAATATCCTTTTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp AGCCATGGGCTTGGATCCCTGCGACATGCTCCTTTGGCTTCATGCGTATGGCTCCCTCTCTGCTGGGGATaGTGCAAACGTCTTCTCCAA +
Preference number: 2 (lower is better)
Translates to: SHGLGSLRHAPLASCVWLPLCWG*CKRLLQ
Trigger: TTGGAGAAGACGTTTGCACCATCCCCAGCAGAGAGG...GAGCCATACGCATGAAGCCAAAGGAGCATGTCGCAGGGATCCAAGCCCATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR TCA 90 bp TTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAGGGGGGTGGGAAGGGATGTaGACGTGCCAGTGTGTATGT +
Preference number: 2 (lower is better)
Translates to: LQRIREWHPGDGLKSAAGGWEGM*TCQCVC
Trigger: ACATACACACTGGCACGTTCACATCCCTTCCCACCC...CCCTGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
ENSMUST00000184951.8
3UTR-3UTR TCA 90 bp TTCAGGGGTCTGTGTGAAGAAGTTTATGGCTGCTGCACCCCCTGCAGGGCCATGTGGACGCTGGGGAACTaGCAACAGACTCATTTCTCT +
Preference number: 2 (lower is better)
Translates to: FRGLCEEVYGCCTPCRAMWTLGN*QQTHFS
Trigger: AGAGAAATGAGTCTGTTGTCAGTTCCCCAGCGTCCA...CATGGCCCTGCAGGGGGTGCAGCAGCCATAAACTTCTTCACACAGACCCCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR TCA 90 bp CTCGGGTTCCTTGGACGCTGGGGAACTGACAACAGACTCATTTCTCTCACTGTTTGGGTAGGATGTGGATaGTGCTGGCTGTGTCTCGGG +
Preference number: 2 (lower is better)
Translates to: LGFLGRWGTDNRLISLTVWVGCG*CWLCLG
Trigger: CCCGAGACACAGCCAGCATCATCCACATCCTACCCA...AACAGTGAGAGAAATGAGTCTGTTGTCAGTTCCCCAGCGTCCAAGGAACCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR TCA 90 bp TCAGGGGTCTGTGTGAAGAAGTTTATGGCTGCTGCACCCCCTGCAGGGCCATGTCTTCAGGGGTCTGTGTaGAGAAGTTTATGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: SGVCVKKFMAAAPPAGPCLQGSV*RSLWLL
Trigger: CAGCAGCCATAAACTTCTTCACACAGACCCCTGAAG...ACATGGCCCTGCAGGGGGTGCAGCAGCCATAAACTTCTTCACACAGACCCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp GCTTGGATCCCTGCGACATGCTCCTTTGGCTTCATGCGTATGGCTCCTGGATCAGTTTCTGCAGACACCTaGTCACTCACAGAGCTGCTG +
Preference number: 2 (lower is better)
Translates to: AWIPATCSFGFMRMAPGSVSADT*SLTELL
Trigger: CAGCAGCTCTGTGAGTGAGCAGGTGTCTGCAGAAAC...TGATCCAGGAGCCATACGCATGAAGCCAAAGGAGCATGTCGCAGGGATCCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp CTACTTTCCCTTTGGAATGCATGGTTTTTCCAAGTGTCCACAGGTGATGCTCTCACCACAGAGGCTGGGTaGTGCCCCTGGGAAGCTGCC +
Preference number: 2 (lower is better)
Translates to: LLSLWNAWFFQVSTGDALTTEAG*CPWEAA
Trigger: GGCAGCTTCCCAGGGGCAGCACCCAGCCTCTGTGGT...GAGAGCATCACCTGTGGACACTTGGAAAAACCATGCATTCCAAAGGGAAAGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp CTGGGGATGGTGCAAACGTCTTCTCCAAAGTTTCAGGCAAAGAGTGATACATGTCCCTGCAGGGCCATGTaGCTGCACCACAGAGGCTGG +
Preference number: 2 (lower is better)
Translates to: LGMVQTSSPKFQAKSDTCPCRAM*LHHRGW
Trigger: CCAGCCTCTGTGGTGCAGGCACATGGCCCTGCAGGG...ACATGTATCACTCTTTGCCTGAAACTTTGGAGAAGACGTTTGCACCATCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp GAGCATGCAGAAAGCCATGGGCTTGGATCCCTGCGACATGCTCCTTTGGCTTCATGCTTTGACTGGTTCTaGTTCAGCCTCTGTGCCCAG +
Preference number: 2 (lower is better)
Translates to: EHAESHGLGSLRHAPLASCFDWF*FSLCAQ
Trigger: CTGGGCACAGAGGCTGAAGCAGAACCAGTCAAAGCA...TGAAGCCAAAGGAGCATGTCGCAGGGATCCAAGCCCATGGCTTTCTGCATGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp CTGTGTGAAGAAGTTTATGGCTGCTGCACCCCCTGCAGGGCCATGTGCCTGCACGAAAAGAAGCCCATTTaGGTTTCTGCAGACACCTGC +
Preference number: 2 (lower is better)
Translates to: LCEEVYGCCTPCRAMCLHEKKPI*VSADTC
Trigger: GCAGGTGTCTGCAGAAACCCAAATGGGCTTCTTTTC...GTGCAGGCACATGGCCCTGCAGGGGGTGCAGCAGCCATAAACTTCTTCACACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp TCAGGGGTCTGTGTGAAGAAGTTTATGGCTGCTGCACCCCCTGCAGGGCCATGTAGTCTGGGTAGGATGTaGATGATGCTGGCTGTGTCT +
Preference number: 2 (lower is better)
Translates to: SGVCVKKFMAAAPPAGPCSLGRM*MMLAVS
Trigger: AGACACAGCCAGCATCATCCACATCCTACCCAGACT...ACATGGCCCTGCAGGGGGTGCAGCAGCCATAAACTTCTTCACACAGACCCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp CGTTCCTGCAAAACTTTGGAGGCACTGCTGGCTGCATTGAAGCGTTCTCTCAAGCAGGGGCCTCTCTGCTaGGGATGGTGCAAACGTCTT +
Preference number: 2 (lower is better)
Translates to: RSCKTLEALLAALKRSLKQGPLC*GWCKRL
Trigger: AAGACGTTTGCACCATCCCCAGCAGAGAGGCCCCTG...CTTGAGAGAACGCTTCAATGCAGCCAGCAGTGCCTCCAAAGTTTTGCAGGAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
3UTR-3UTR TCA 90 bp GCTTTATGCTTAATGGAAACTGGAGCCACCCTGGGAACAGCCCAAGATGGGTCAGGGTGGGAAGGGATGTaGACGTGCCAGTGTGTATGT +
Preference number: 2 (lower is better)
Translates to: ALCLMETGATLGTAQDGSGWEGM*TCQCVC
Trigger: ACATACACACTGGCACGTTCACATCCCTTCCCACCC...TGACCCATCTTGGGCTGTTCCCAGGGTGGCTCCAGTTTCCATTAAGCATAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
ENSMUST00000184951.8
3UTR-3UTR TCA 90 bp GAGCATGCAGAAAGCCATGGGCTTGGATCCCTGCGACATGCTCCTTTGGCTTCATGGACGCTGGGGAACTaGCAACAGACTCATTTCTCT +
Preference number: 2 (lower is better)
Translates to: EHAESHGLGSLRHAPLASWTLGN*QQTHFS
Trigger: AGAGAAATGAGTCTGTTGTCAGTTCCCCAGCGTCCA...TGAAGCCAAAGGAGCATGTCGCAGGGATCCAAGCCCATGGCTTTCTGCATGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp TTGCTTGTGAAGACGAGTCAGTGTCAGAGTGACGAGACAGGCTTGGTTCCAGAAGAAGTTTATGGCTGCTaGACCCCCTGCAGGGCCATG +
Preference number: 2 (lower is better)
Translates to: LLVKTSQCQSDETGLVPEEVYGC*TPCRAM
Trigger: CATGGCCCTGCAGGGGGTGCAGCAGCCATAAACTTC...TTCTGGAACCAAGCCTGTCTCGTCACTCTGACACTGACTCGTCTTCACAAGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp AGAAAGCCATGGGCTTGGATCCCTGCGACATGCTCCTTTGGCTTCATGCGTATGTGGATCCCTGCGACATaGTCCTTTGGCTTCATGCGT +
Preference number: 2 (lower is better)
Translates to: RKPWAWIPATCSFGFMRMWIPAT*SFGFMR
Trigger: ACGCATGAAGCCAAAGGAGCATGTCGCAGGGATCCA...CATACGCATGAAGCCAAAGGAGCATGTCGCAGGGATCCAAGCCCATGGCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp CTCTTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCACTGGGGTCCAGAGGCTaGCCAGTAAAGATGGAGTAC +
Preference number: 2 (lower is better)
Translates to: LLQRIREWHPGDGLKSAALGSRG*PVKMEY
Trigger: GTACTCCATCTTTACTGGGCAGCCTCTGGACCCCAG...TGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp CGTTCCTGCAAAACTTTGGAGGCACTGCTGGCTGCATTGAAGCGTTCTCTCAAGAGAAAGCCATGGGCTTaGATCCCTGCGACATGCTCC +
Preference number: 2 (lower is better)
Translates to: RSCKTLEALLAALKRSLKRKPWA*IPATCS
Trigger: GGAGCATGTCGCAGGGATCCAAGCCCATGGCTTTCT...CTTGAGAGAACGCTTCAATGCAGCCAGCAGTGCCTCCAAAGTTTTGCAGGAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp CGTTCCTGCAAAACTTTGGAGGCACTGCTGGCTGCATTGAAGCGTTCTCTCAAGGTGACGAGACAGGCTTaGTTCCAGAACGGAGTCTGG +
Preference number: 2 (lower is better)
Translates to: RSCKTLEALLAALKRSLKVTRQA*FQNGVW
Trigger: CCAGACTCCGTTCTGGAACCAAGCCTGTCTCGTCAC...CTTGAGAGAACGCTTCAATGCAGCCAGCAGTGCCTCCAAAGTTTTGCAGGAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
3UTR CAA 90 bp GGAAAAGGATATTCTGTCGTCAAGAGCATGCAGAAAGCCATGGGCTaGGATCCCTGCGACATGCTCCTTTGGCTTCATGCGTATGGCTCC +
Preference number: 2 (lower is better)
Translates to: GKGYSVVKSMQKAMG*DPCDMLLWLHAYGS
Trigger: GGAGCCATACGCATGAAGCCAAAGGAGCATGTCGCAGGGATCCAAGCCCATGGCTTTCTGCATGCTCTTGACGACAGAATATCCTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR CAA 90 bp GCCACGGTCACTGGCGTTAGCATAATCTCTCTTTTTGTTGGAGTGTaGGCTTTCCGACTGGACGGTGGGAGAGACGACGACCTTTGTGAA +
Preference number: 2 (lower is better)
Translates to: ATVTGVSIISLFVGV*AFRLDGGRDDDLCE
Trigger: TTCACAAAGGTCGTCGTCTCTCCCACCGTCCAGTCGGAAAGCCAACACTCCAACAAAAAGAGAGATTATGCTAACGCCAGTGACCGTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR-3UTR TCA 90 bp CGGGCAGAAAACCCAGCTATCCACCTGCCACTTCCAGCTCTAATCATTTTCTTTCGCAGAGTGGCTTTGTaGGAAGAGAGGGGCACAGCT +
Preference number: 2 (lower is better)
Translates to: RAENPAIHLPLPALIIFFRRVAL*EERGTA
Trigger: AGCTGTGCCCCTCTCTTCTCACAAAGCCACTCTGCG...AAAGAAAATGATTAGAGCTGGAAGTGGCAGGTGGATAGCTGGGTTTTCTGCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR-3UTR TCA 90 bp TCAAATTCCCCAGGAAAAGTGGAGCCGTCTTCCTTTAGAGAGGCACAAAGCTCTGTAGCCACTGCTCACTaGGCTGCTGTCCACATGGCA +
Preference number: 2 (lower is better)
Translates to: SNSPGKVEPSSFREAQSSVATAH*AAVHMA
Trigger: TGCCATGTGGACAGCAGCTCAGTGAGCAGTGGCTAC...AGAGCTTTGTGCCTCTCTAAAGGAAGACGGCTCCACTTTTCCTGGGGAATTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR TCA 90 bp CTTGGATCCCTGCGACATGCTCCTTTGGCTTCATGCGTATGGCTCCTGGATCAACTTCAGGGGTCTGTGTaGAGAAGTTTATGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: LGSLRHAPLASCVWLLDQLQGSV*RSLWLL
Trigger: CAGCAGCCATAAACTTCTTCACACAGACCCCTGAAG...TTGATCCAGGAGCCATACGCATGAAGCCAAAGGAGCATGTCGCAGGGATCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR TCA 90 bp GCTTGGATCCCTGCGACATGCTCCTTTGGCTTCATGCGTATGGCTCCTGGATCAGTTTCAGGCAAAGAGTaGTACATGTCCTTCTCCTCC +
Preference number: 2 (lower is better)
Translates to: AWIPATCSFGFMRMAPGSVSGKE*YMSFSS
Trigger: GGAGGAGAAGGACATGTATCACTCTTTGCCTGAAAC...TGATCCAGGAGCCATACGCATGAAGCCAAAGGAGCATGTCGCAGGGATCCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR TCA 90 bp TCCTTGGACGCTGGGGAACTGACAACAGACTCATTTCTCTCACTGTTCTCAGAAGCTGCTCAACCACACTaGAGAGCTGCAACCACCTGG +
Preference number: 2 (lower is better)
Translates to: SLDAGELTTDSFLSLFSEAAQPH*RAATTW
Trigger: CCAGGTGGTTGCAGCTCTTCAGTGTGGTTGAGCAGC...TTCTGAGAACAGTGAGAGAAATGAGTCTGTTGTCAGTTCCCCAGCGTCCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp GCTTTATGCTTAATGGAAACTGGAGCCACCCTGGGAACAGCCCAAGATGGGTCAGCCCATTTGGGTTTCTaGAGACACCTGCTCACTCAC +
Preference number: 2 (lower is better)
Translates to: ALCLMETGATLGTAQDGSAHLGF*RHLLTH
Trigger: GTGAGTGAGCAGGTGTCTGCAGAAACCCAAATGGGC...TGACCCATCTTGGGCTGTTCCCAGGGTGGCTCCAGTTTCCATTAAGCATAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp CTTCTCAAGTGTGCGCACTCGACTAGTAGCTTCATTCAATGCACTATCCAGCTGCCAGGATGCAGAAGGTaGCGTAGCCACTGCTCACTG +
Preference number: 2 (lower is better)
Translates to: LLKCAHSTSSFIQCTIQLPGCRR*RSHCSL
Trigger: CAGTGAGCAGTGGCTACGGCACCTTCTGCATCCTGG...CAGCTGGATAGTGCATTGAATGAAGCTACTAGTCGAGTGCGCACACTTGAGAAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp CTCTGCTGGGGATGGTGCAAACGTCTTCTCCAAAGTTTCAGGCAAAGAGTGATACCAGGATGCAGAAGGTaGCGTAGCCACTGCTCACTG +
Preference number: 2 (lower is better)
Translates to: LCWGWCKRLLQSFRQRVIPGCRR*RSHCSL
Trigger: CAGTGAGCAGTGGCTACGGCACCTTCTGCATCCTGG...TATCACTCTTTGCCTGAAACTTTGGAGAAGACGTTTGCACCATCCCCAGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp ATTTCATTTTTCTTCTTCCACTCTTCAACGGCAGAAATGTCTTTGGCCTCCAGTACAGAGGCTGGGTGCTaGCCCTGGGAAGCTGCCCCC +
Preference number: 2 (lower is better)
Translates to: ISFFFFHSSTAEMSLASSTEAGC*PWEAAP
Trigger: GGGGGCAGCTTCCCAGGGGCAGCACCCAGCCTCTGT...ACTGGAGGCCAAAGACATTTCTGCCGTTGAAGAGTGGAAGAAGAAAAATGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp ATTTCATTTTTCTTCTTCCACTCTTCAACGGCAGAAATGTCTTTGGCCTCCAGTGGCTGCTGCACCCCCTaGAGGGCCATGTGCCTGCAC +
Preference number: 2 (lower is better)
Translates to: ISFFFFHSSTAEMSLASSGCCTP*RAMCLH
Trigger: GTGCAGGCACATGGCCCTGCAGGGGGTGCAGCAGCC...ACTGGAGGCCAAAGACATTTCTGCCGTTGAAGAGTGGAAGAAGAAAAATGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp GACAGGCTTGGTTCCAGAACGGAGTCTGGGGAAAAGGATATTCTGTCGTCAAGACTATGGAACTGCTCCTaGTGGGCGACAATCTGCTCC +
Preference number: 2 (lower is better)
Translates to: DRLGSRTESGEKDILSSRLWNCS*WATICS
Trigger: GGAGCAGATTGTCGCCCAGCAGGAGCAGTTCCATAG...TCTTGACGACAGAATATCCTTTTCCCCAGACTCCGTTCTGGAACCAAGCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp ACAGCGCTCTTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTAAACTGGAGCCACCCTaGGAACAGCCCAAGATGGGT +
Preference number: 2 (lower is better)
Translates to: TALLQRIREWHPGDGLKSKLEPP*EQPKMG
Trigger: ACCCATCTTGGGCTGTTCCCAGGGTGGCTCCAGTTT...AGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAAGAGCGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
ENSMUST00000184951.8
3UTR-3UTR CCA 90 bp CTCTTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAGTCCATATTTATGTCTaGCACTCGATGGCAGGCCCC +
Preference number: 2 (lower is better)
Translates to: LLQRIREWHPGDGLKSAAVHIYV*HSMAGP
Trigger: GGGGCCTGCCATCGAGTGCCAGACATAAATATGGAC...TGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR-3UTR CCA 90 bp GACATGCTCCTTTGGCTTCATGCGTATGGCTCCTGGATCAAGAGTCAGGACCTGGTCAAATGTGTCAGCTaGAGGCTTCCAGTTCAGCTC +
Preference number: 2 (lower is better)
Translates to: DMLLWLHAYGSWIKSQDLVKCVS*RLPVQL
Trigger: GAGCTGAACTGGAAGCCTCCAGCTGACACATTTGAC...CAGGTCCTGACTCTTGATCCAGGAGCCATACGCATGAAGCCAAAGGAGCATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp ACTTGGAGAACCCAGACACCTGGGAAGGATTATGACTTGCTTGTGAAGACGAGTTCAAGAGTCAGGACCTaGCTCAGGGGCCTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: TWRTQTPGKDYDLLVKTSSRVRT*LRGLSA
Trigger: AGCAGAGAGGCCCCTGAGCCAGGTCCTGACTCTTGA...ACTCGTCTTCACAAGCAAGTCATAATCCTTCCCAGGTGTCTGGGTTCTCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR TCA 90 bp CTACTTTCCCTTTGGAATGCATGGTTTTTCCAAGTGTCCACAGGTGATGCTCTCTGGGTAGGATGTGGATaGTGCTGGCTGTGTCTCGGG +
Preference number: 2 (lower is better)
Translates to: LLSLWNAWFFQVSTGDALWVGCG*CWLCLG
Trigger: CCCGAGACACAGCCAGCATCATCCACATCCTACCCA...GAGAGCATCACCTGTGGACACTTGGAAAAACCATGCATTCCAAAGGGAAAGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR TCA 90 bp TTTCAGGCAAAGAGTGATACATGTCCTTCTCCTCCAGTTTCCAGTAAGTCAGCCTGGGTAGGATGTGGATaGTGCTGGCTGTGTCTCGGG +
Preference number: 2 (lower is better)
Translates to: FQAKSDTCPSPPVSSKSAWVGCG*CWLCLG
Trigger: CCCGAGACACAGCCAGCATCATCCACATCCTACCCA...GGCTGACTTACTGGAAACTGGAGGAGAAGGACATGTATCACTCTTTGCCTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp GACTGCTCTTCCAGAGGGCCTAGGTTCAATTCCCAGCACTCACATGTCAGCTCATCACACTGGCCGATCTaGACTGAAAGGATTCTCCTA +
Preference number: 2 (lower is better)
Translates to: DCSSRGPRFNSQHSHVSSSHWPI*TERILL
Trigger: TAGGAGAATCCTTTCAGTGCAGATCGGCCAGTGTGA...TGAGCTGACATGTGAGTGCTGGGAATTGAACCTAGGCCCTCTGGAAGAGCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR-3UTR GCA 90 bp AGAAATGTCTTTGGCCTCCAGTTTCTGTTTCAGACTACTTATCTCCGACTCATACCCTGCAGGGCCATGTaGCTGCACCACAGAGGCTGG +
Preference number: 2 (lower is better)
Translates to: RNVFGLQFLFQTTYLRLIPCRAM*LHHRGW
Trigger: CCAGCCTCTGTGGTGCAGGCACATGGCCCTGCAGGG...TATGAGTCGGAGATAAGTAGTCTGAAACAGAAACTGGAGGCCAAAGACATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp TTGGCTTCATGCGTATGGCTCCTGGATCAAGAGTCAGGACCTGGCTCAGGGGCCAGACTTACCACTATTTaGTTTCCCACTGTACACTTC +
Preference number: 2 (lower is better)
Translates to: LASCVWLLDQESGPGSGARLTTI*FPTVHF
Trigger: GAAGTGTACAGTGGGAAAGCAAATAGTGGTAAGTCT...GGCCCCTGAGCCAGGTCCTGACTCTTGATCCAGGAGCCATACGCATGAAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp CGGGCAGAAAACCCAGCTATCCACCTGCCACTTCCAGCTCTAATCATTTTCTTTAAACTGGAGCCACCCTaGGAACAGCCCAAGATGGGT +
Preference number: 2 (lower is better)
Translates to: RAENPAIHLPLPALIIFFKLEPP*EQPKMG
Trigger: ACCCATCTTGGGCTGTTCCCAGGGTGGCTCCAGTTT...AAAGAAAATGATTAGAGCTGGAAGTGGCAGGTGGATAGCTGGGTTTTCTGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
ENSMUST00000184951.8
3UTR-3UTR CCA 90 bp CCTGGGAAGGATTATGACTTGCTTGTGAAGACGAGTCAGTGTCAGAGTGACGAGCCTCTCTGCTGGGGATaGTGCAAACGTCTTCTCCAA +
Preference number: 2 (lower is better)
Translates to: PGKDYDLLVKTSQCQSDEPLCWG*CKRLLQ
Trigger: TTGGAGAAGACGTTTGCACCATCCCCAGCAGAGAGG...CTCGTCACTCTGACACTGACTCGTCTTCACAAGCAAGTCATAATCCTTCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp CCTGGGAAGGATTATGACTTGCTTGTGAAGACGAGTCAGTGTCAGAGTGACGAGTGCGACATGCTCCTTTaGCTTCATGCGTATGGCTCC +
Preference number: 2 (lower is better)
Translates to: PGKDYDLLVKTSQCQSDECDMLL*LHAYGS
Trigger: GGAGCCATACGCATGAAGCCAAAGGAGCATGTCGCA...CTCGTCACTCTGACACTGACTCGTCTTCACAAGCAAGTCATAATCCTTCCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp TTGCTTGTGAAGACGAGTCAGTGTCAGAGTGACGAGACAGGCTTGGTTCCAGAATGCGACATGCTCCTTTaGCTTCATGCGTATGGCTCC +
Preference number: 2 (lower is better)
Translates to: LLVKTSQCQSDETGLVPECDMLL*LHAYGS
Trigger: GGAGCCATACGCATGAAGCCAAAGGAGCATGTCGCA...TTCTGGAACCAAGCCTGTCTCGTCACTCTGACACTGACTCGTCTTCACAAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp AAAAGGATATTCTGTCGTCAAGAGCATGCAGAAAGCCATGGGCTTGGATCCCTGGCATGCAGAAAGCCATaGGCTTGGATCCCTGCGACA +
Preference number: 2 (lower is better)
Translates to: KRIFCRQEHAESHGLGSLACRKP*AWIPAT
Trigger: TGTCGCAGGGATCCAAGCCCATGGCTTTCTGCATGC...CAGGGATCCAAGCCCATGGCTTTCTGCATGCTCTTGACGACAGAATATCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR CAA 90 bp GACTTGCTTGTGAAGACGAGTCAGTGTCAGAGTGACGAGACAGGCTaGGTTCCAGAACGGAGTCTGGGGAAAAGGATATTCTGTCGTCAA +
Preference number: 2 (lower is better)
Translates to: DLLVKTSQCQSDETG*VPERSLGKRIFCRQ
Trigger: TTGACGACAGAATATCCTTTTCCCCAGACTCCGTTCTGGAACCAAGCCTGTCTCGTCACTCTGACACTGACTCGTCTTCACAAGCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR TCA 90 bp GACTTGCTTGTGAAGACGAGTCAGTGTCAGAGTGACGAGACAGGCTTGGTTCCAAGTCAGCCCTGTTCCTaGATCAGACAACCAAGAACT +
Preference number: 2 (lower is better)
Translates to: DLLVKTSQCQSDETGLVPSQPCS*IRQPRT
Trigger: AGTTCTTGGTTGTCTGATTCAGGAACAGGGCTGACT...TGGAACCAAGCCTGTCTCGTCACTCTGACACTGACTCGTCTTCACAAGCAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp ATGCTCCTTTGGCTTCATGCGTATGGCTCCTGGATCAAGAGTCAGGACCTGGCTTCTTTACAAACAAGCTaGCTCCCCAGGTACATTTCC +
Preference number: 2 (lower is better)
Translates to: MLLWLHAYGSWIKSQDLASLQTS*LPRYIS
Trigger: GGAAATGTACCTGGGGAGGCAGCTTGTTTGTAAAGA...AGCCAGGTCCTGACTCTTGATCCAGGAGCCATACGCATGAAGCCAAAGGAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp GGAATGCATGGTTTTTCCAAGTGTCCACAGGTGATGCTCTCGTGGTTGAAGGATGTTTCTGCAGACACCTaGTCACTCACAGAGCTGCTG +
Preference number: 2 (lower is better)
Translates to: GMHGFSKCPQVMLSWLKDVSADT*SLTELL
Trigger: CAGCAGCTCTGTGAGTGAGCAGGTGTCTGCAGAAAC...ATCCTTCAACCACGAGAGCATCACCTGTGGACACTTGGAAAAACCATGCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp TCTAGCAAGTTGTTGTTCTTCTCAAGTGTGCGCACTCGACTAGTAGCTTCATTCGAAGTTTATGGCTGCTaGACCCCCTGCAGGGCCATG +
Preference number: 2 (lower is better)
Translates to: SSKLLFFSSVRTRLVASFEVYGC*TPCRAM
Trigger: CATGGCCCTGCAGGGGGTGCAGCAGCCATAAACTTC...GAATGAAGCTACTAGTCGAGTGCGCACACTTGAGAAGAACAACAACTTGCTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp TCTTCTCCAAAGTTTCAGGCAAAGAGTGATACATGTCCTTCTCCTCCAGTTTCCGAAGAAGTTTATGGCTaGTGCACCCCCTGCAGGGCC +
Preference number: 2 (lower is better)
Translates to: SSPKFQAKSDTCPSPPVSEEVYG*CTPCRA
Trigger: GGCCCTGCAGGGGGTGCAGCAGCCATAAACTTCTTC...GGAAACTGGAGGAGAAGGACATGTATCACTCTTTGCCTGAAACTTTGGAGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp GGAATGCATGGTTTTTCCAAGTGTCCACAGGTGATGCTCTCGTGGTTGAAGGATCTGTCGTCAAGAGCATaGAGAAAGCCATGGGCTTGG +
Preference number: 2 (lower is better)
Translates to: GMHGFSKCPQVMLSWLKDLSSRA*RKPWAW
Trigger: CCAAGCCCATGGCTTTCTGCATGCTCTTGACGACAG...ATCCTTCAACCACGAGAGCATCACCTGTGGACACTTGGAAAAACCATGCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp AAGGATATTCTGTCGTCAAGAGCATGCAGAAAGCCATGGGCTTGGATCCCTGCGGAAAAGAAGCCCATTTaGGTTTCTGCAGACACCTGC +
Preference number: 2 (lower is better)
Translates to: KDILSSRACRKPWAWIPAEKKPI*VSADTC
Trigger: GCAGGTGTCTGCAGAAACCCAAATGGGCTTCTTTTC...CGCAGGGATCCAAGCCCATGGCTTTCTGCATGCTCTTGACGACAGAATATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp AGCTGGGAACAGCTTCTCCTGCCCACACAGCGCTCTTACAGAGAATTAGGGAATGAAAAGAAGCCCATTTaGGTTTCTGCAGACACCTGC +
Preference number: 2 (lower is better)
Translates to: SWEQLLLPTQRSYRELGNEKKPI*VSADTC
Trigger: GCAGGTGTCTGCAGAAACCCAAATGGGCTTCTTTTC...ATTCCCTAATTCTCTGTAAGAGCGCTGTGTGGGCAGGAGAAGCTGTTCCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR CAA 90 bp GACAACAGACTCATTTCTCTCACTGTTCTCAGAAAAGAAGCCCATTaGGGTTTCTGCAGACACCTGCTCACTCACAGAGCTGCTGCTGCA +
Preference number: 2 (lower is better)
Translates to: DNRLISLTVLRKEAH*GFCRHLLTHRAAAA
Trigger: TGCAGCAGCAGCTCTGTGAGTGAGCAGGTGTCTGCAGAAACCCAAATGGGCTTCTTTTCTGAGAACAGTGAGAGAAATGAGTCTGTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR CAA 90 bp TTGAAGGATACTTGGAGAACCCAGACACCTGGGAAGGATTATGACTaGCTTGTGAAGACGAGTCAGTGTCAGAGTGACGAGACAGGCTTG +
Preference number: 2 (lower is better)
Translates to: LKDTWRTQTPGKDYD*LVKTSQCQSDETGL
Trigger: CAAGCCTGTCTCGTCACTCTGACACTGACTCGTCTTCACAAGCAAGTCATAATCCTTCCCAGGTGTCTGGGTTCTCCAAGTATCCTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR CAA 90 bp GGAATGCATGGTTTTTCCAAGTGTCCACAGGTGATGCTCTCGTGGTaGAAGGATACTTGGAGAACCCAGACACCTGGGAAGGATTATGAC +
Preference number: 2 (lower is better)
Translates to: GMHGFSKCPQVMLSW*KDTWRTQTPGKDYD
Trigger: GTCATAATCCTTCCCAGGTGTCTGGGTTCTCCAAGTATCCTTCAACCACGAGAGCATCACCTGTGGACACTTGGAAAAACCATGCATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR TCA 90 bp CAGACACCTGGGAAGGATTATGACTTGCTTGTGAAGACGAGTCAGTGTCAGAGTCTTCAGGGGTCTGTGTaGAGAAGTTTATGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: QTPGKDYDLLVKTSQCQSLQGSV*RSLWLL
Trigger: CAGCAGCCATAAACTTCTTCACACAGACCCCTGAAG...ACTCTGACACTGACTCGTCTTCACAAGCAAGTCATAATCCTTCCCAGGTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp GTCGCAACACAGACAGGATACTTGCTGCTCCTAGCTGGGAACAGCTTCTCCTGCCTGGCCTTTTCCCAGTaGATAATTGTTACATTAGTG +
Preference number: 2 (lower is better)
Translates to: VATQTGYLLLLAGNSFSCLAFSQ*IIVTLV
Trigger: CACTAATGTAACAATTATGCACTGGGAAAAGGCCAG...GCAGGAGAAGCTGTTCCCAGCTAGGAGCAGCAAGTATCCTGTCTGTGTTGCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
ENSMUST00000184951.8
3UTR-3UTR CCA 90 bp CGGGCAGAAAACCCAGCTATCCACCTGCCACTTCCAGCTCTAATCATTTTCTTTCAAAAGCCTGAGCCCTaGCCCTGTAAATCAACTGTG +
Preference number: 2 (lower is better)
Translates to: RAENPAIHLPLPALIIFFQKPEP*PCKSTV
Trigger: CACAGTTGATTTACAGGGCCAGGGCTCAGGCTTTTG...AAAGAAAATGATTAGAGCTGGAAGTGGCAGGTGGATAGCTGGGTTTTCTGCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp TTTAAGACTGCTACCCTGCCCACTTTTAGGCTGAGCTGCTTTTTAGCTGAGTGTCACGCTACCACCACGTaGACAACACTCTCAGCTTGT +
Preference number: 2 (lower is better)
Translates to: FKTATLPTFRLSCFLAECHATTT*TTLSAC
Trigger: ACAAGCTGAGAGTGTTGTCCACGTGGTGGTAGCGTG...ACACTCAGCTAAAAAGCAGCTCAGCCTAAAAGTGGGCAGGGTAGCAGTCTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp CTCTGCTGGGGATGGTGCAAACGTCTTCTCCAAAGTTTCAGGCAAAGAGTGATAAGTCTGGGTAGGATGTaGATGATGCTGGCTGTGTCT +
Preference number: 2 (lower is better)
Translates to: LCWGWCKRLLQSFRQRVISLGRM*MMLAVS
Trigger: AGACACAGCCAGCATCATCCACATCCTACCCAGACT...TATCACTCTTTGCCTGAAACTTTGGAGAAGACGTTTGCACCATCCCCAGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp TACTTTCCCTTTGGAATGCATGGTTTTTCCAAGTGTCCACAGGTGATGCTCTCGCCTCTCTGCTGGGGATaGTGCAAACGTCTTCTCCAA +
Preference number: 2 (lower is better)
Translates to: YFPFGMHGFSKCPQVMLSPLCWG*CKRLLQ
Trigger: TTGGAGAAGACGTTTGCACCATCCCCAGCAGAGAGG...CGAGAGCATCACCTGTGGACACTTGGAAAAACCATGCATTCCAAAGGGAAAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR CAA 90 bp CTCTTCGGTCTCTGCTGGGCACATTTCTCTGGGGAACGGCCTGTATaGACTGAAGGCTCAGTTTGCCGAGAATTCACTAATTTACTTGAA +
Preference number: 2 (lower is better)
Translates to: LFGLCWAHFSGERPV*TEGSVCREFTNLLE
Trigger: TTCAAGTAAATTAGTGAATTCTCGGCAAACTGAGCCTTCAGTCAATACAGGCCGTTCCCCAGAGAAATGTGCCCAGCAGAGACCGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR-3UTR TCA 90 bp TCAGGGGCCTCTCTGCTGGGGATGGTGCAAACGTCTTCTCCAAAGTTTCAGGCATGTAAAACTACCGTCTaGAGGCTTATAAACAGTAGA +
Preference number: 2 (lower is better)
Translates to: SGASLLGMVQTSSPKFQACKTTV*RLINSR
Trigger: TCTACTGTTTATAAGCCTTCAGACGGTAGTTTTACA...TGCCTGAAACTTTGGAGAAGACGTTTGCACCATCCCCAGCAGAGAGGCCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR-3UTR TCA 90 bp CAGACACCTGGGAAGGATTATGACTTGCTTGTGAAGACGAGTCAGTGTCAGAGTACCTGGGAAGGATTATaGCTTGCTTGTGAAGACGAG +
Preference number: 2 (lower is better)
Translates to: QTPGKDYDLLVKTSQCQSTWEGL*LACEDE
Trigger: CTCGTCTTCACAAGCAAGTCATAATCCTTCCCAGGT...ACTCTGACACTGACTCGTCTTCACAAGCAAGTCATAATCCTTCCCAGGTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp TTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAGGGCTGGCCTTTTCCCAGTaGATAATTGTTACATTAGTG +
Preference number: 2 (lower is better)
Translates to: LQRIREWHPGDGLKSAAGLAFSQ*IIVTLV
Trigger: CACTAATGTAACAATTATGCACTGGGAAAAGGCCAG...CCCTGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
ENSMUST00000184951.8
3UTR-3UTR GCA 90 bp AGCTCAGACGACTCTGTCTGCAGACTCAGAGCACAAATATGTGGGTGCTGGGTTGGAGCTAAAGCTTTATaGTTAATGGAAACTGGAGCC +
Preference number: 2 (lower is better)
Translates to: SSDDSVCRLRAQICGCWVGAKAL*LMETGA
Trigger: GGCTCCAGTTTCCATTAAGCATAAAGCTTTAGCTCC...AACCCAGCACCCACATATTTGTGCTCTGAGTCTGCAGACAGAGTCGTCTGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
ENSMUST00000184951.8
3UTR-3UTR GCA 90 bp TGTCTCAAGTTTAATGGCTACCAGTCTCAAAGATTTGCAGAGCTGCGCAAAACAGGGAACAGCTTCTCCTaGCCACACAGCGCTCTTACA +
Preference number: 2 (lower is better)
Translates to: CLKFNGYQSQRFAELRKTGNSFS*PHSALT
Trigger: TGTAAGAGCGCTGTGTGGGCAGGAGAAGCTGTTCCC...TGTTTTGCGCAGCTCTGCAAATCTTTGAGACTGGTAGCCATTAAACTTGAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp ATGCTCCTTTGGCTTCATGCGTATGGCTCCTGGATCAAGAGTCAGGACCTGGCTAGACTTACCACTATTTaGTTTCCCACTGTACACTTC +
Preference number: 2 (lower is better)
Translates to: MLLWLHAYGSWIKSQDLARLTTI*FPTVHF
Trigger: GAAGTGTACAGTGGGAAAGCAAATAGTGGTAAGTCT...AGCCAGGTCCTGACTCTTGATCCAGGAGCCATACGCATGAAGCCAAAGGAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp TCTAGCAAGTTGTTGTTCTTCTCAAGTGTGCGCACTCGACTAGTAGCTTCATTCTGCTTTGACTGGTTCTaGTTCAGCCTCTGTGCCCAG +
Preference number: 2 (lower is better)
Translates to: SSKLLFFSSVRTRLVASFCFDWF*FSLCAQ
Trigger: CTGGGCACAGAGGCTGAAGCAGAACCAGTCAAAGCA...GAATGAAGCTACTAGTCGAGTGCGCACACTTGAGAAGAACAACAACTTGCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp ACTCTAAGTAGTTTCTCATCGTGGAGAAAGAACTCAGGGGCAAACCAAAATCAATGGCAAGGGTGGGGGTaGGTGGGTCAGGTAAGGTTA +
Preference number: 2 (lower is better)
Translates to: TLSSFSSWRKNSGANQNQWQGWG*VGQVRL
Trigger: TAACCTTACCTGACCCACCCACCCCCACCCTTGCCA...TTGATTTTGGTTTGCCCCTGAGTTCTTTCTCCACGATGAGAAACTACTTAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp TTTCAGGCAAAGAGTGATACATGTCCTTCTCCTCCAGTTTCCAGTAAGTCAGCCAGTCTGGGTAGGATGTaGATGATGCTGGCTGTGTCT +
Preference number: 2 (lower is better)
Translates to: FQAKSDTCPSPPVSSKSASLGRM*MMLAVS
Trigger: AGACACAGCCAGCATCATCCACATCCTACCCAGACT...GGCTGACTTACTGGAAACTGGAGGAGAAGGACATGTATCACTCTTTGCCTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR CAA 90 bp GAGCCCTGCACTAACCTAACACGGGATGAAAAGTCCATATTGCTCTaGGCAGAACAGGAAATCATTTCTGGCAAAATCTGTGCACCACCA +
Preference number: 2 (lower is better)
Translates to: EPCTNLTRDEKSILL*AEQEIISGKICAPP
Trigger: TGGTGGTGCACAGATTTTGCCAGAAATGATTTCCTGTTCTGCCAAGAGCAATATGGACTTTTCATCCCGTGTTAGGTTAGTGCAGGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR CAA 90 bp TCAGCATACTCTCGTGCTCTGCCTGCTTCACCTGAGCCTCAAGCTTaGAGATTGTCCTTTTCAAGTCAGAAATCTGAGTGTGTGCATCAA +
Preference number: 2 (lower is better)
Translates to: SAYSRALPASPEPQA*RLSFSSQKSECVHQ
Trigger: TTGATGCACACACTCAGATTTCTGACTTGAAAAGGACAATCTCAAAGCTTGAGGCTCAGGTGAAGCAGGCAGAGCACGAGAGTATGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR-3UTR TCA 90 bp CTTCAAAAACCAAAGCTTACGCTTTCTAAGGAGCGCAGATGTTCTGATGGCGTTCTGGCCGATCTGCACTaGAAGGATTCTCCTATCCTT +
Preference number: 2 (lower is better)
Translates to: LQKPKLTLSKERRCSDGVLADLH*KDSPIL
Trigger: AAGGATAGGAGAATCCTTTCAGTGCAGATCGGCCAG...AACGCCATCAGAACATCTGCGCTCCTTAGAAAGCGTAAGCTTTGGTTTTTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR-3UTR TCA 90 bp AAATGTCTTTGGCCTCCAGTTTCTGTTTCAGACTACTTATCTCCGACTCATAATGTAGCCACTGCTCACTaGGCTGCTGTCCACATGGCA +
Preference number: 2 (lower is better)
Translates to: KCLWPPVSVSDYLSPTHNVATAH*AAVHMA
Trigger: TGCCATGTGGACAGCAGCTCAGTGAGCAGTGGCTAC...ATTATGAGTCGGAGATAAGTAGTCTGAAACAGAAACTGGAGGCCAAAGACATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp GACAGGCTTGGTTCCAGAACGGAGTCTGGGGAAAAGGATATTCTGTCGTCAAGAGGAGCTAAAGCTTTATaGTTAATGGAAACTGGAGCC +
Preference number: 2 (lower is better)
Translates to: DRLGSRTESGEKDILSSRGAKAL*LMETGA
Trigger: GGCTCCAGTTTCCATTAAGCATAAAGCTTTAGCTCC...TCTTGACGACAGAATATCCTTTTCCCCAGACTCCGTTCTGGAACCAAGCCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp GTGCAAACGTCTTCTCCAAAGTTTCAGGCAAAGAGTGATACATGTCCTTCTCCTGAAGCATGGCTGAGCTaGAGTTTCACTAACTTCCGG +
Preference number: 2 (lower is better)
Translates to: VQTSSPKFQAKSDTCPSPEAWLS*SFTNFR
Trigger: CCGGAAGTTAGTGAAACTGCAGCTCAGCCATGCTTC...AGGAGAAGGACATGTATCACTCTTTGCCTGAAACTTTGGAGAAGACGTTTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp CATGGAACTTTTGAAGGAAACGGTACTGTAGTCAAGCCAACATTAAACCATAGTCTTGCTGCTCCTAGCTaGGAACAGCTTCTCCTGCCC +
Preference number: 2 (lower is better)
Translates to: HGTFEGNGTVVKPTLNHSLAAPS*EQLLLP
Trigger: GGGCAGGAGAAGCTGTTCCCAGCTAGGAGCAGCAAG...ACTATGGTTTAATGTTGGCTTGACTACAGTACCGTTTCCTTCAAAAGTTCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR-3UTR CCA 90 bp AGTACATCCCAGCATAGAAACAGTTTGCCTCTCTTGGGTAACAGATGCTCTTTACACGCTACCACCACGTaGACAACACTCTCAGCTTGT +
Preference number: 2 (lower is better)
Translates to: STSQHRNSLPLLGNRCSLHATTT*TTLSAC
Trigger: ACAAGCTGAGAGTGTTGTCCACGTGGTGGTAGCGTG...TAAAGAGCATCTGTTACCCAAGAGAGGCAAACTGTTTCTATGCTGGGATGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp CGGGCAGAAAACCCAGCTATCCACCTGCCACTTCCAGCTCTAATCATTTTCTTTAAGAAATCACTGGGTTaGGAACATAGCTCAGTGGCA +
Preference number: 2 (lower is better)
Translates to: RAENPAIHLPLPALIIFFKKSLG*EHSSVA
Trigger: TGCCACTGAGCTATGTTCCCAACCCAGTGATTTCTT...AAAGAAAATGATTAGAGCTGGAAGTGGCAGGTGGATAGCTGGGTTTTCTGCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR-3UTR CCA 90 bp CAAACGTCTTCTCCAAAGTTTCAGGCAAAGAGTGATACATGTCCTTCTCCTCCAGTCAAATGTGTCAGCTaGAGGCTTCCAGTTCAGCTC +
Preference number: 2 (lower is better)
Translates to: QTSSPKFQAKSDTCPSPPVKCVS*RLPVQL
Trigger: GAGCTGAACTGGAAGCCTCCAGCTGACACATTTGAC...TGGAGGAGAAGGACATGTATCACTCTTTGCCTGAAACTTTGGAGAAGACGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp AAATGTCTTTGGCCTCCAGTTTCTGTTTCAGACTACTTATCTCCGACTCATAATCAGGGGCCTCTCTGCTaGGGATGGTGCAAACGTCTT +
Preference number: 2 (lower is better)
Translates to: KCLWPPVSVSDYLSPTHNQGPLC*GWCKRL
Trigger: AAGACGTTTGCACCATCCCCAGCAGAGAGGCCCCTG...ATTATGAGTCGGAGATAAGTAGTCTGAAACAGAAACTGGAGGCCAAAGACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp ATTTCATTTTTCTTCTTCCACTCTTCAACGGCAGAAATGTCTTTGGCCTCCAGTGTGACGAGACAGGCTTaGTTCCAGAACGGAGTCTGG +
Preference number: 2 (lower is better)
Translates to: ISFFFFHSSTAEMSLASSVTRQA*FQNGVW
Trigger: CCAGACTCCGTTCTGGAACCAAGCCTGTCTCGTCAC...ACTGGAGGCCAAAGACATTTCTGCCGTTGAAGAGTGGAAGAAGAAAAATGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
3UTR CAA 90 bp TCCTTATTGCTTGTCCTCATTTCTTCAATTCGTTCCTGCAAAACTTaGGAGGCACTGCTGGCTGCATTGAAGCGTTCTCTCAAGTCACTC +
Preference number: 2 (lower is better)
Translates to: SLLLVLISSIRSCKT*EALLAALKRSLKSL
Trigger: GAGTGACTTGAGAGAACGCTTCAATGCAGCCAGCAGTGCCTCCAAAGTTTTGCAGGAACGAATTGAAGAAATGAGGACAAGCAATAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR-3UTR TCA 90 bp GTGCAAACGTCTTCTCCAAAGTTTCAGGCAAAGAGTGATACATGTCCTTCTCCTGTTTCAGGCAAAGAGTaGTACATGTCCTTCTCCTCC +
Preference number: 2 (lower is better)
Translates to: VQTSSPKFQAKSDTCPSPVSGKE*YMSFSS
Trigger: GGAGGAGAAGGACATGTATCACTCTTTGCCTGAAAC...AGGAGAAGGACATGTATCACTCTTTGCCTGAAACTTTGGAGAAGACGTTTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp ATATTGCTGTGGTCCAATAGAAATCACTTTCATCATTCACTCAGACATCACAAGGAAGAAGTTTATGGCTaGTGCACCCCCTGCAGGGCC +
Preference number: 2 (lower is better)
Translates to: ILLWSNRNHFHHSLRHHKEEVYG*CTPCRA
Trigger: GGCCCTGCAGGGGGTGCAGCAGCCATAAACTTCTTC...CTTGTGATGTCTGAGTGAATGATGAAAGTGATTTCTATTGGACCACAGCAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141203.8
3UTR-3UTR GCA 90 bp ACTCTAAGTAGTTTCTCATCGTGGAGAAAGAACTCAGGGGCAAACCAAAATCAATGTATTCGCCGGATCTaGCTATGGAACTGCTCCTGC +
Preference number: 2 (lower is better)
Translates to: TLSSFSSWRKNSGANQNQCIRRI*LWNCSC
Trigger: GCAGGAGCAGTTCCATAGGCAGATCCGGCGAATACA...TTGATTTTGGTTTGCCCCTGAGTTCTTTCTCCACGATGAGAAACTACTTAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp CAGTTGCTGATATACATACTTAGACAACATCACAGGATCTTCCAGGGAAGCCAAGAAGCATGGCTGAGCTaGAGTTTCACTAACTTCCGG +
Preference number: 2 (lower is better)
Translates to: QLLIYILRQHHRIFQGSQEAWLS*SFTNFR
Trigger: CCGGAAGTTAGTGAAACTGCAGCTCAGCCATGCTTC...TTGGCTTCCCTGGAAGATCCTGTGATGTTGTCTAAGTATGTATATCAGCAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141203.8
3UTR-3UTR CCA 90 bp CTTCAAAAACCAAAGCTTACGCTTTCTAAGGAGCGCAGATGTTCTGATGGCGTTAAGACAAGCAGAATTTaGCAAAGCACCTGGCTTCCC +
Preference number: 2 (lower is better)
Translates to: LQKPKLTLSKERRCSDGVKTSRI*QSTWLP
Trigger: GGGAAGCCAGGTGCTTTGCCAAATTCTGCTTGTCTT...AACGCCATCAGAACATCTGCGCTCCTTAGAAAGCGTAAGCTTTGGTTTTTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR-3UTR CCA 90 bp GTTGTTGTTCTTCTCAAGTGTGCGCACTCGACTAGTAGCTTCATTCAATGCACTATTCCCCAGGAAAAGTaGAGCCGTCTTCCTTTAGAG +
Preference number: 2 (lower is better)
Translates to: VVVLLKCAHSTSSFIQCTIPQEK*SRLPLE
Trigger: CTCTAAAGGAAGACGGCTCCACTTTTCCTGGGGAAT...AGTGCATTGAATGAAGCTACTAGTCGAGTGCGCACACTTGAGAAGAACAACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp CAAAGTTTCAGGCAAAGAGTGATACATGTCCTTCTCCTCCAGTTTCCAGTAAGTGTCAAATGTGTCAGCTaGAGGCTTCCAGTTCAGCTC +
Preference number: 2 (lower is better)
Translates to: QSFRQRVIHVLLLQFPVSVKCVS*RLPVQL
Trigger: GAGCTGAACTGGAAGCCTCCAGCTGACACATTTGAC...ACTTACTGGAAACTGGAGGAGAAGGACATGTATCACTCTTTGCCTGAAACTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR CAA 90 bp TCTGCTTCAGCCTCTGTGCCCAGGATGTTACAGACTTACCACTATTaGCTTTCCCACTGTACACTTCAGAGATCTTGTTTTCACCAAGAA +
Preference number: 2 (lower is better)
Translates to: SASASVPRMLQTYHY*LSHCTLQRSCFHQE
Trigger: TTCTTGGTGAAAACAAGATCTCTGAAGTGTACAGTGGGAAAGCAAATAGTGGTAAGTCTGTAACATCCTGGGCACAGAGGCTGAAGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR CAA 90 bp TCTTCAATTCGTTCCTGCAAAACTTTGGAGGCACTGCTGGCTGCATaGAAGCGTTCTCTCAAGTCACTCACTTCTATTTCTAGCAAGTTG +
Preference number: 2 (lower is better)
Translates to: SSIRSCKTLEALLAA*KRSLKSLTSISSKL
Trigger: CAACTTGCTAGAAATAGAAGTGAGTGACTTGAGAGAACGCTTCAATGCAGCCAGCAGTGCCTCCAAAGTTTTGCAGGAACGAATTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
3UTR-3UTR TCA 90 bp ACAGCGCTCTTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTTGTAAAACTACCGTCTaGAGGCTTATAAACAGTAGA +
Preference number: 2 (lower is better)
Translates to: TALLQRIREWHPGDGLKSCKTTV*RLINSR
Trigger: TCTACTGTTTATAAGCCTTCAGACGGTAGTTTTACA...AGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAAGAGCGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
ENSMUST00000184951.8
3UTR-3UTR GCA 90 bp CGGGCAGAAAACCCAGCTATCCACCTGCCACTTCCAGCTCTAATCATTTTCTTTAGCATAGAAACAGTTTaGCTCTCTTGGGTAACAGAT +
Preference number: 2 (lower is better)
Translates to: RAENPAIHLPLPALIIFFSIETV*LSWVTD
Trigger: ATCTGTTACCCAAGAGAGGCAAACTGTTTCTATGCT...AAAGAAAATGATTAGAGCTGGAAGTGGCAGGTGGATAGCTGGGTTTTCTGCCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp AAAGTTCATTGTAAAAGGGTAACACTATTTCTTTACAAACAAGCTGCCTCCCCAACCACACTGAAGAGCTaGAACCACCTGGCCTCGCAA +
Preference number: 2 (lower is better)
Translates to: KVHCKRVTLFLYKQAASPTTLKS*NHLASQ
Trigger: TTGCGAGGCCAGGTGGTTGCAGCTCTTCAGTGTGGT...TGGGGAGGCAGCTTGTTTGTAAAGAAATAGTGTTACCCTTTTACAATGAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp TACATCTATTACACACTTCAAAAACCAAAGCTTACGCTTTCTAAGGAGCGCAGATCACCAGAAAGTGAGTaGGTGAGCAGCCCAGACATC +
Preference number: 2 (lower is better)
Translates to: YIYYTLQKPKLTLSKERRSPESE*VSSPDI
Trigger: GATGTCTGGGCTGCTCACCCACTCACTTTCTGGTGA...TCTGCGCTCCTTAGAAAGCGTAAGCTTTGGTTTTTGAAGTGTGTAATAGATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
3UTR CAA 90 bp GCATTGAAGCGTTCTCTCAAGTCACTCACTTCTATTTCTAGCAAGTaGTTGTTCTTCTCAAGTGTGCGCACTCGACTAGTAGCTTCATTC +
Preference number: 2 (lower is better)
Translates to: ALKRSLKSLTSISSK*LFFSSVRTRLVASF
Trigger: GAATGAAGCTACTAGTCGAGTGCGCACACTTGAGAAGAACAACAACTTGCTAGAAATAGAAGTGAGTGACTTGAGAGAACGCTTCAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
3UTR CAA 90 bp TCAAGTCAGAAATCTGAGTGTGTGCATCAAGCAATTTGTTCTCAGTaGTGTTTAATGTATCCTTTACTCGCCCGTGTTCTTTGCCGAGGG +
Preference number: 2 (lower is better)
Translates to: SSQKSECVHQAICSQ*CLMYPLLARVLCRG
Trigger: CCCTCGGCAAAGAACACGGGCGAGTAAAGGATACATTAAACACAACTGAGAACAAATTGCTTGATGCACACACTCAGATTTCTGACTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR-3UTR TCA 90 bp ACTCTAAGTAGTTTCTCATCGTGGAGAAAGAACTCAGGGGCAAACCAAAATCAAACCTGGGAAGGATTATaGCTTGCTTGTGAAGACGAG +
Preference number: 2 (lower is better)
Translates to: TLSSFSSWRKNSGANQNQTWEGL*LACEDE
Trigger: CTCGTCTTCACAAGCAAGTCATAATCCTTCCCAGGT...TTGATTTTGGTTTGCCCCTGAGTTCTTTCTCCACGATGAGAAACTACTTAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp CTTCAAAAACCAAAGCTTACGCTTTCTAAGGAGCGCAGATGTTCTGATGGCGTTGGAGCTAAAGCTTTATaGTTAATGGAAACTGGAGCC +
Preference number: 2 (lower is better)
Translates to: LQKPKLTLSKERRCSDGVGAKAL*LMETGA
Trigger: GGCTCCAGTTTCCATTAAGCATAAAGCTTTAGCTCC...AACGCCATCAGAACATCTGCGCTCCTTAGAAAGCGTAAGCTTTGGTTTTTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp ACTCTAAGTAGTTTCTCATCGTGGAGAAAGAACTCAGGGGCAAACCAAAATCAAGGGAAGCCAATGAAATaGATTCTGGGACACTGTTGG +
Preference number: 2 (lower is better)
Translates to: TLSSFSSWRKNSGANQNQGKPMK*ILGHCW
Trigger: CCAACAGTGTCCCAGAATGCATTTCATTGGCTTCCC...TTGATTTTGGTTTGCCCCTGAGTTCTTTCTCCACGATGAGAAACTACTTAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp CTTCAAAAACCAAAGCTTACGCTTTCTAAGGAGCGCAGATGTTCTGATGGCGTTTCTTCAATTCGTTCCTaGAAAACTTTGGAGGCACTG +
Preference number: 2 (lower is better)
Translates to: LQKPKLTLSKERRCSDGVSSIRS*KTLEAL
Trigger: CAGTGCCTCCAAAGTTTTGCAGGAACGAATTGAAGA...AACGCCATCAGAACATCTGCGCTCCTTAGAAAGCGTAAGCTTTGGTTTTTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp AGTACATCCCAGCATAGAAACAGTTTGCCTCTCTTGGGTAACAGATGCTCTTTATTCCAGAACGGAGTCTaGGGAAAAGGATATTCTGTC +
Preference number: 2 (lower is better)
Translates to: STSQHRNSLPLLGNRCSLFQNGV*GKGYSV
Trigger: GACAGAATATCCTTTTCCCCAGACTCCGTTCTGGAA...TAAAGAGCATCTGTTACCCAAGAGAGGCAAACTGTTTCTATGCTGGGATGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp CTTCAAAAACCAAAGCTTACGCTTTCTAAGGAGCGCAGATGTTCTGATGGCGTTTGGTTTGTTGTAACGTaGACACAGGAACGGTATCTA +
Preference number: 2 (lower is better)
Translates to: LQKPKLTLSKERRCSDGVWFVVT*TQERYL
Trigger: TAGATACCGTTCCTGTGTCCACGTTACAACAAACCA...AACGCCATCAGAACATCTGCGCTCCTTAGAAAGCGTAAGCTTTGGTTTTTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR-3UTR TCA 90 bp CATGGAACTTTTGAAGGAAACGGTACTGTAGTCAAGCCAACATTAAACCATAGTCCTGTAAATCAACTGTaGGAGCTCAGACGACTCTGT +
Preference number: 2 (lower is better)
Translates to: HGTFEGNGTVVKPTLNHSPVNQL*ELRRLC
Trigger: ACAGAGTCGTCTGAGCTCTCACAGTTGATTTACAGG...ACTATGGTTTAATGTTGGCTTGACTACAGTACCGTTTCCTTCAAAAGTTCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR-3UTR TCA 90 bp AGTACATCCCAGCATAGAAACAGTTTGCCTCTCTTGGGTAACAGATGCTCTTTAAATGATAGGAAATCCTaGTTAAGCCAGCCTTCCCTA +
Preference number: 2 (lower is better)
Translates to: STSQHRNSLPLLGNRCSLNDRKS*LSQPSL
Trigger: TAGGGAAGGCTGGCTTAATCAGGATTTCCTATCATT...TAAAGAGCATCTGTTACCCAAGAGAGGCAAACTGTTTCTATGCTGGGATGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp TCTTCTCCAAAGTTTCAGGCAAAGAGTGATACATGTCCTTCTCCTCCAGTTTCCCTGGCCTTTTCCCAGTaGATAATTGTTACATTAGTG +
Preference number: 2 (lower is better)
Translates to: SSPKFQAKSDTCPSPPVSLAFSQ*IIVTLV
Trigger: CACTAATGTAACAATTATGCACTGGGAAAAGGCCAG...GGAAACTGGAGGAGAAGGACATGTATCACTCTTTGCCTGAAACTTTGGAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR-3UTR CCA 90 bp TTTGCTTTCCCACTGTACACTTCAGAGATCTTGTTTTCACCAAGAAAATTTCGGATTCCCCAGGAAAAGTaGAGCCGTCTTCCTTTAGAG +
Preference number: 2 (lower is better)
Translates to: FAFPLYTSEILFSPRKFRIPQEK*SRLPLE
Trigger: CTCTAAAGGAAGACGGCTCCACTTTTCCTGGGGAAT...CCGAAATTTTCTTGGTGAAAACAAGATCTCTGAAGTGTACAGTGGGAAAGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR CAA 90 bp TTGAAGCGTTCTCTCAAGTCACTCACTTCTATTTCTAGCAAGTTGTaGTTCTTCTCAAGTGTGCGCACTCGACTAGTAGCTTCATTCAAT +
Preference number: 2 (lower is better)
Translates to: LKRSLKSLTSISSKL*FFSSVRTRLVASFN
Trigger: ATTGAATGAAGCTACTAGTCGAGTGCGCACACTTGAGAAGAACAACAACTTGCTAGAAATAGAAGTGAGTGACTTGAGAGAACGCTTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
3UTR-3UTR TCA 90 bp ACTCTAAGTAGTTTCTCATCGTGGAGAAAGAACTCAGGGGCAAACCAAAATCAAATACAAAAGTGTGCGTaGCCCACTGATGAATGTAAC +
Preference number: 2 (lower is better)
Translates to: TLSSFSSWRKNSGANQNQIQKCA*PTDECN
Trigger: GTTACATTCATCAGTGGGTCACGCACACTTTTGTAT...TTGATTTTGGTTTGCCCCTGAGTTCTTTCTCCACGATGAGAAACTACTTAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR-3UTR GCA 90 bp AGTACATCCCAGCATAGAAACAGTTTGCCTCTCTTGGGTAACAGATGCTCTTTAACTTTTAGGCTGAGCTaGTTTTTAGCTGAGTGTTCA +
Preference number: 2 (lower is better)
Translates to: STSQHRNSLPLLGNRCSLTFRLS*FLAECS
Trigger: TGAACACTCAGCTAAAAAGCAGCTCAGCCTAAAAGT...TAAAGAGCATCTGTTACCCAAGAGAGGCAAACTGTTTCTATGCTGGGATGTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
3UTR-3UTR GCA 90 bp AATCATGGAACTTTTGAAGGAAACGGTACTGTAGTCAAGCCAACATTAAACCATTCTTTACAAACAAGCTaGCTCCCCAGGTACATTTCC +
Preference number: 2 (lower is better)
Translates to: NHGTFEGNGTVVKPTLNHSLQTS*LPRYIS
Trigger: GGAAATGTACCTGGGGAGGCAGCTTGTTTGTAAAGA...ATGGTTTAATGTTGGCTTGACTACAGTACCGTTTCCTTCAAAAGTTCCATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR-3UTR GCA 90 bp ACTCTAAGTAGTTTCTCATCGTGGAGAAAGAACTCAGGGGCAAACCAAAATCAAACTTTTAGGCTGAGCTaGTTTTTAGCTGAGTGTTCA +
Preference number: 2 (lower is better)
Translates to: TLSSFSSWRKNSGANQNQTFRLS*FLAECS
Trigger: TGAACACTCAGCTAAAAAGCAGCTCAGCCTAAAAGT...TTGATTTTGGTTTGCCCCTGAGTTCTTTCTCCACGATGAGAAACTACTTAGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
3UTR CAA 90 bp CATCATTCACTCAGACATCACAAGTCTAGTAACATTATAAGCCAGTaGCTGATATACATACTTAGACAACATCACAGGATCTTCCAGGGA +
Preference number: 2 (lower is better)
Translates to: HHSLRHHKSSNIISQ*LIYILRQHHRIFQG
Trigger: TCCCTGGAAGATCCTGTGATGTTGTCTAAGTATGTATATCAGCAACTGGCTTATAATGTTACTAGACTTGTGATGTCTGAGTGAATGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141203.8
3UTR-3UTR TCA 90 bp CATGGAACTTTTGAAGGAAACGGTACTGTAGTCAAGCCAACATTAAACCATAGTTGTAAAACTACCGTCTaGAGGCTTATAAACAGTAGA +
Preference number: 2 (lower is better)
Translates to: HGTFEGNGTVVKPTLNHSCKTTV*RLINSR
Trigger: TCTACTGTTTATAAGCCTTCAGACGGTAGTTTTACA...ACTATGGTTTAATGTTGGCTTGACTACAGTACCGTTTCCTTCAAAAGTTCCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR GCA 72 bp CTGCACCACAGAGGCTGGGTGCTGCCCCTGGGAAGCTaGCCCCGGCTCCAAGGGCTCGGTGGGCTCCTTAGC +
Preference number: 3 (lower is better)
Translates to: LHHRGWVLPLGS*PRLQGLGGLLS
Trigger: GCTAAGGAGCCCACCGAGCCCTTGGAGCCGGGGGCAGCTTCCCAGGGGCAGCACCCAGCCTCTGTGGTGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR GCA 72 bp TGCTCCTGCTGGGCGACAATCTGCTCCTGGCAGTGCTaGTCAACCACACTGAAGAGCTGCAACCACCTGGCC +
Preference number: 3 (lower is better)
Translates to: CSCWATICSWQC*STTLKSCNHLA
Trigger: GGCCAGGTGGTTGCAGCTCTTCAGTGTGGTTGAGCAGCACTGCCAGGAGCAGATTGTCGCCCAGCAGGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR CCA 72 bp CGACTCCTGGAGCCATCCCTCAAAGCTCCCGCAGAGTaGCTTTGTGAGAAGAGAGGGGCACAGCTCCACAGC +
Preference number: 3 (lower is better)
Translates to: RLLEPSLKAPAE*LCEKRGAQLHS
Trigger: GCTGTGGAGCTGTGCCCCTCTCTTCTCACAAAGCCACTCTGCGGGAGCTTTGAGGGATGGCTCCAGGAGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR TCA 72 bp GGAGCCATCCCTCAAAGCTCCCGCAGAGTGGCTTTGTaGGAAGAGAGGGGCACAGCTCCACAGCTGGAGAGT +
Preference number: 3 (lower is better)
Translates to: GAIPQSSRRVAL*EERGTAPQLES
Trigger: ACTCTCCAGCTGTGGAGCTGTGCCCCTCTCTTCTCACAAAGCCACTCTGCGGGAGCTTTGAGGGATGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR TCA 72 bp GCTGCTGTCCACATGGCAGTCTGGGTAGGATGTGGATaGTGCTGGCTGTGTCTCGGGTTCCTTGGACGCTGG +
Preference number: 3 (lower is better)
Translates to: AAVHMAVWVGCG*CWLCLGFLGRW
Trigger: CCAGCGTCCAAGGAACCCGAGACACAGCCAGCATCATCCACATCCTACCCAGACTGCCATGTGGACAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR TCA 72 bp GTCCAGGATGCAGAAGGTGCCGTAGCCACTGCTCACTaGGCTGCTGTCCACATGGCAGTCTGGGTAGGATGT +
Preference number: 3 (lower is better)
Translates to: VQDAEGAVATAH*AAVHMAVWVGC
Trigger: ACATCCTACCCAGACTGCCATGTGGACAGCAGCTCAGTGAGCAGTGGCTACGGCACCTTCTGCATCCTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR TCA 72 bp CAGAGCTGCTGCTGCACGAAGGCCGGGAAGCATGGCTaGGCTGCAGTTTCACTAACTTCCGGATCTCCTCCT +
Preference number: 3 (lower is better)
Translates to: QSCCCTKAGKHG*AAVSLTSGSPP
Trigger: AGGAGGAGATCCGGAAGTTAGTGAAACTGCAGCTCAGCCATGCTTCCCGGCCTTCGTGCAGCAGCAGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR GCA 72 bp GCTCTGAGCGCAGACCAATGGCTCTTACCGTGGAAGTaGTTTTCTCTTTGGCAAGGGTGGGGGTGGGTGGGT +
Preference number: 3 (lower is better)
Translates to: ALSADQWLLPWK*FSLWQGWGWVG
Trigger: ACCCACCCACCCCCACCCTTGCCAAAGAGAAAAGCACTTCCACGGTAAGAGCCATTGGTCTGCGCTCAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
ENSMUST00000184951.8
3UTR GCA 72 bp AAGCTCTTCAGGGGTCTGTGTGAAGAAGTTTATGGCTaGTGCACCCCCTGCAGGGCCATGTGCCTGCACCAC +
Preference number: 3 (lower is better)
Translates to: KLFRGLCEEVYG*CTPCRAMCLHH
Trigger: GTGGTGCAGGCACATGGCCCTGCAGGGGGTGCAGCAGCCATAAACTTCTTCACACAGACCCCTGAAGAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR GCA 72 bp GGGCTTGGATCCCTGCGACATGCTCCTTTGGCTTCATaGGTATGGCTCCTGGATCAAGAGTCAGGACCTGGC +
Preference number: 3 (lower is better)
Translates to: GLGSLRHAPLAS*VWLLDQESGPG
Trigger: GCCAGGTCCTGACTCTTGATCCAGGAGCCATACGCATGAAGCCAAAGGAGCATGTCGCAGGGATCCAAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR GCA 72 bp AACTGCTCCTGCTGGGCGACAATCTGCTCCTGGCAGTaGTGCTCAACCACACTGAAGAGCTGCAACCACCTG +
Preference number: 3 (lower is better)
Translates to: NCSCWATICSWQ*CSTTLKSCNHL
Trigger: CAGGTGGTTGCAGCTCTTCAGTGTGGTTGAGCAGCACTGCCAGGAGCAGATTGTCGCCCAGCAGGAGCAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR GCA 72 bp TCCTGTATTCGCCGGATCTGCCTATGGAACTGCTCCTaGTGGGCGACAATCTGCTCCTGGCAGTGCTGCTCA +
Preference number: 3 (lower is better)
Translates to: SCIRRICLWNCS*WATICSWQCCS
Trigger: TGAGCAGCACTGCCAGGAGCAGATTGTCGCCCAGCAGGAGCAGTTCCATAGGCAGATCCGGCGAATACAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR CCA 72 bp GGATCCCTGCGACATGCTCCTTTGGCTTCATGCGTATaGCTCCTGGATCAAGAGTCAGGACCTGGCTCAGGG +
Preference number: 3 (lower is better)
Translates to: GSLRHAPLASCV*LLDQESGPGSG
Trigger: CCCTGAGCCAGGTCCTGACTCTTGATCCAGGAGCCATACGCATGAAGCCAAAGGAGCATGTCGCAGGGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR CCA 72 bp TTCCGGATCTCCTCCTGTATTCGCCGGATCTGCCTATaGAACTGCTCCTGCTGGGCGACAATCTGCTCCTGG +
Preference number: 3 (lower is better)
Translates to: FRISSCIRRICL*NCSCWATICSW
Trigger: CCAGGAGCAGATTGTCGCCCAGCAGGAGCAGTTCCATAGGCAGATCCGGCGAATACAGGAGGAGATCCGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR CCA 72 bp CTCACAGAGCTGCTGCTGCACGAAGGCCGGGAAGCATaGCTGAGCTGCAGTTTCACTAACTTCCGGATCTCC +
Preference number: 3 (lower is better)
Translates to: LTELLLHEGREA*LSCSFTNFRIS
Trigger: GGAGATCCGGAAGTTAGTGAAACTGCAGCTCAGCCATGCTTCCCGGCCTTCGTGCAGCAGCAGCTCTGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR GCA 72 bp TGTTCATGTCCAGGATGCAGAAGGTGCCGTAGCCACTaGTCACTGAGCTGCTGTCCACATGGCAGTCTGGGT +
Preference number: 3 (lower is better)
Translates to: CSCPGCRRCRSH*SLSCCPHGSLG
Trigger: ACCCAGACTGCCATGTGGACAGCAGCTCAGTGAGCAGTGGCTACGGCACCTTCTGCATCCTGGACATGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR GCA 72 bp ATCTGCCTATGGAACTGCTCCTGCTGGGCGACAATCTaGTCCTGGCAGTGCTGCTCAACCACACTGAAGAGC +
Preference number: 3 (lower is better)
Translates to: ICLWNCSCWATI*SWQCCSTTLKS
Trigger: GCTCTTCAGTGTGGTTGAGCAGCACTGCCAGGAGCAGATTGTCGCCCAGCAGGAGCAGTTCCATAGGCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR GCA 72 bp GGAGAATGGTATCCAGGAACAAGGGCTTCCTCCAGCTaGTTATCTAGCTTCCTGTCCCTGGGGTCCAGAGGC +
Preference number: 3 (lower is better)
Translates to: GEWYPGTRASSS*LSSFLSLGSRG
Trigger: GCCTCTGGACCCCAGGGACAGGAAGCTAGATAAGCAGCTGGAGGAAGCCCTTGTTCCTGGATACCATTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR CCA 72 bp CTATGGAACTGCTCCTGCTGGGCGACAATCTGCTCCTaGCAGTGCTGCTCAACCACACTGAAGAGCTGCAAC +
Preference number: 3 (lower is better)
Translates to: LWNCSCWATICS*QCCSTTLKSCN
Trigger: GTTGCAGCTCTTCAGTGTGGTTGAGCAGCACTGCCAGGAGCAGATTGTCGCCCAGCAGGAGCAGTTCCATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR CCA 72 bp CAGAGGCTGCCCAGTAAAGATGGAGTACTCCGCTCCTaGAATCAGCCACTTCCTCCTGCTGACATCCGAGGT +
Preference number: 3 (lower is better)
Translates to: QRLPSKDGVLRS*NQPLPPADIRG
Trigger: ACCTCGGATGTCAGCAGGAGGAAGTGGCTGATTCCAGGAGCGGAGTACTCCATCTTTACTGGGCAGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR-3UTR CAA 90 bp AGAAAGCCATGGGCTTGGATCCCTGCGACATGCTCCTTTGGCTTCATGCGTATGGTGGGCTCCTTAGCCTaGTGGGTGTTCATGTCCAGG +
Preference number: 3 (lower is better)
Translates to: RKPWAWIPATCSFGFMRMVGSLA*WVFMSR
Trigger: CCTGGACATGAACACCCACAAGGCTAAGGAGCCCAC...CATACGCATGAAGCCAAAGGAGCATGTCGCAGGGATCCAAGCCCATGGCTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR TCA 72 bp CCTTTAGAGAGGCACAAAGCTCTTCAGGGGTCTGTGTaGAGAAGTTTATGGCTGCTGCACCCCCTGCAGGGC +
Preference number: 3 (lower is better)
Translates to: PLERHKALQGSV*RSLWLLHPLQG
Trigger: GCCCTGCAGGGGGTGCAGCAGCCATAAACTTCTTCACACAGACCCCTGAAGAGCTTTGTGCCTCTCTAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR GCA 72 bp TCAGAAAAGAAGCCCATTTGGGTTTCTGCAGACACCTaGTCACTCACAGAGCTGCTGCTGCACGAAGGCCGG +
Preference number: 3 (lower is better)
Translates to: SEKKPIWVSADT*SLTELLLHEGR
Trigger: CCGGCCTTCGTGCAGCAGCAGCTCTGTGAGTGAGCAGGTGTCTGCAGAAACCCAAATGGGCTTCTTTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR GCA 72 bp GGCTTAGGTCCTGAGCAGTCATCCTCTGTATGTGCCTaGTTTGACTGGTTCTGCTTCAGCCTCTGTGCCCAG +
Preference number: 3 (lower is better)
Translates to: GLGPEQSSSVCA*FDWFCFSLCAQ
Trigger: CTGGGCACAGAGGCTGAAGCAGAACCAGTCAAAGCAGGCACATACAGAGGATGACTGCTCAGGACCTAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR GCA 72 bp TGGATCAAGAGTCAGGACCTGGCTCAGGGGCCTCTCTaGTGGGGATGGTGCAAACGTCTTCTCCAAAGTTTC +
Preference number: 3 (lower is better)
Translates to: WIKSQDLAQGPL*WGWCKRLLQSF
Trigger: GAAACTTTGGAGAAGACGTTTGCACCATCCCCAGCAGAGAGGCCCCTGAGCCAGGTCCTGACTCTTGATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR GCA 72 bp GCATGCAGAAAGCCATGGGCTTGGATCCCTGCGACATaGTCCTTTGGCTTCATGCGTATGGCTCCTGGATCA +
Preference number: 3 (lower is better)
Translates to: ACRKPWAWIPAT*SFGFMRMAPGS
Trigger: TGATCCAGGAGCCATACGCATGAAGCCAAAGGAGCATGTCGCAGGGATCCAAGCCCATGGCTTTCTGCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR GCA 72 bp GTCAAGAGCATGCAGAAAGCCATGGGCTTGGATCCCTaGGACATGCTCCTTTGGCTTCATGCGTATGGCTCC +
Preference number: 3 (lower is better)
Translates to: VKSMQKAMGLDP*DMLLWLHAYGS
Trigger: GGAGCCATACGCATGAAGCCAAAGGAGCATGTCGCAGGGATCCAAGCCCATGGCTTTCTGCATGCTCTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR GCA 72 bp TGCTCCTGGCAGTGCTGCTCAACCACACTGAAGAGCTaGAACCACCTGGCCTCGCAACTCTTCCAAAGTTCT +
Preference number: 3 (lower is better)
Translates to: CSWQCCSTTLKS*NHLASQLFQSS
Trigger: AGAACTTTGGAAGAGTTGCGAGGCCAGGTGGTTGCAGCTCTTCAGTGTGGTTGAGCAGCACTGCCAGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR GCA 72 bp ACTAACTTCCGGATCTCCTCCTGTATTCGCCGGATCTaGCTATGGAACTGCTCCTGCTGGGCGACAATCTGC +
Preference number: 3 (lower is better)
Translates to: TNFRISSCIRRI*LWNCSCWATIC
Trigger: GCAGATTGTCGCCCAGCAGGAGCAGTTCCATAGGCAGATCCGGCGAATACAGGAGGAGATCCGGAAGTTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR GCA 72 bp CTGCTGCTGCACGAAGGCCGGGAAGCATGGCTGAGCTaGAGTTTCACTAACTTCCGGATCTCCTCCTGTATT +
Preference number: 3 (lower is better)
Translates to: LLLHEGREAWLS*SFTNFRISSCI
Trigger: AATACAGGAGGAGATCCGGAAGTTAGTGAAACTGCAGCTCAGCCATGCTTCCCGGCCTTCGTGCAGCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR CCA 72 bp ACTCAGAGCACAAATATGTGGGTGCTGGGTTCGCACTaGTCACCAGAAAGTGAGTGGGTGAGCAGCCCAGAC +
Preference number: 3 (lower is better)
Translates to: TQSTNMWVLGSH*SPESEWVSSPD
Trigger: GTCTGGGCTGCTCACCCACTCACTTTCTGGTGACCAGTGCGAACCCAGCACCCACATATTTGTGCTCTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
ENSMUST00000184951.8
3UTR CCA 72 bp ATCAAGAGTCAGGACCTGGCTCAGGGGCCTCTCTGCTaGGGATGGTGCAAACGTCTTCTCCAAAGTTTCAGG +
Preference number: 3 (lower is better)
Translates to: IKSQDLAQGPLC*GWCKRLLQSFR
Trigger: CCTGAAACTTTGGAGAAGACGTTTGCACCATCCCCAGCAGAGAGGCCCCTGAGCCAGGTCCTGACTCTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR CAA 90 bp GGTCTGTGTGAAGAAGTTTATGGCTGCTGCACCCCCTGCAGGGCCATGTGCCTGAGAAAAGAAGCCCATTaGGGTTTCTGCAGACACCTG +
Preference number: 3 (lower is better)
Translates to: GLCEEVYGCCTPCRAMCLRKEAH*GFCRHL
Trigger: CAGGTGTCTGCAGAAACCCAAATGGGCTTCTTTTCT...CAGGCACATGGCCCTGCAGGGGGTGCAGCAGCCATAAACTTCTTCACACAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR CAA 90 bp CTAATCTTCGCTGTATACTCAAAACCGTTGTCCTGTGGTGCTGCTGATCCCGGCGTGGGCTCCTTAGCCTaGTGGGTGTTCATGTCCAGG +
Preference number: 3 (lower is better)
Translates to: LIFAVYSKPLSCGAADPGVGSLA*WVFMSR
Trigger: CCTGGACATGAACACCCACAAGGCTAAGGAGCCCAC...GCCGGGATCAGCAGCACCACAGGACAACGGTTTTGAGTATACAGCGAAGATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR GCA 72 bp GACTCTGTCTGCAGACTCAGAGCACAAATATGTGGGTaGTGGGTTCGCACTGGTCACCAGAAAGTGAGTGGG +
Preference number: 3 (lower is better)
Translates to: DSVCRLRAQICG*WVRTGHQKVSG
Trigger: CCCACTCACTTTCTGGTGACCAGTGCGAACCCAGCACCCACATATTTGTGCTCTGAGTCTGCAGACAGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
ENSMUST00000184951.8
3UTR GCA 72 bp TCGGCCACGTGTCGGGCATGCTTCTCCTTGAGGTTCTaGCTGATCTTAGACAACATCACAGGATCTTCCAGG +
Preference number: 3 (lower is better)
Translates to: SATCRACFSLRF*LILDNITGSSR
Trigger: CCTGGAAGATCCTGTGATGTTGTCTAAGATCAGGCAGAACCTCAAGGAGAAGCATGCCCGACACGTGGCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
3UTR GCA 72 bp GACCTTTGTGAAGCCGAAGTCTGTCTCTTCGGTCTCTaGTGGGCACATTTCTCTGGGGAACGGCCTGTATTG +
Preference number: 3 (lower is better)
Translates to: DLCEAEVCLFGL*WAHFSGERPVL
Trigger: CAATACAGGCCGTTCCCCAGAGAAATGTGCCCAGCAGAGACCGAAGAGACAGACTTCGGCTTCACAAAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR-3UTR CAA 90 bp GAGGGCCTAGGTTCAATTCCCAGCACTCACATGTCAGCTCACACCACCAATGCAACACAGACAGGATACTaGCTGCTCCTAGCTGGGAAC +
Preference number: 3 (lower is better)
Translates to: EGLGSIPSTHMSAHTTNATQTGY*LLLAGN
Trigger: GTTCCCAGCTAGGAGCAGCAAGTATCCTGTCTGTGT...TGCATTGGTGGTGTGAGCTGACATGTGAGTGCTGGGAATTGAACCTAGGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR-3UTR CAA 90 bp CTATCCTTTGGTCTCTACACTGAGGAAAGCAGGCCTGAGCCAGGGTGTGGCCCGTTCTTCAGGATGCAGTaGACTATACAATGGGAGGAG +
Preference number: 3 (lower is better)
Translates to: LSFGLYTEESRPEPGCGPFFRMQ*TIQWEE
Trigger: CTCCTCCCATTGTATAGTCAACTGCATCCTGAAGAA...CGGGCCACACCCTGGCTCAGGCCTGCTTTCCTCAGTGTAGAGACCAAAGGATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR-3UTR CAA 90 bp CGGGCAGAAAACCCAGCTATCCACCTGCCACTTCCAGCTCTAATCATTTTCTTTGATGGCAGGCCCCTCTaGCAGGTGGTCGACAGCTTT +
Preference number: 3 (lower is better)
Translates to: RAENPAIHLPLPALIIFFDGRPL*QVVDSF
Trigger: AAAGCTGTCGACCACCTGCAAGAGGGGCCTGCCATC...AAAGAAAATGATTAGAGCTGGAAGTGGCAGGTGGATAGCTGGGTTTTCTGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR-3UTR CAA 90 bp GACAGGCTTGGTTCCAGAACGGAGTCTGGGGAAAAGGATATTCTGTCGTCAAGAGTGGGCTCCTTAGCCTaGTGGGTGTTCATGTCCAGG +
Preference number: 3 (lower is better)
Translates to: DRLGSRTESGEKDILSSRVGSLA*WVFMSR
Trigger: CCTGGACATGAACACCCACAAGGCTAAGGAGCCCAC...TCTTGACGACAGAATATCCTTTTCCCCAGACTCCGTTCTGGAACCAAGCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR TCA 72 bp CTGGGAACAGCCCAAGATGGGTCACAATGTAAAGCATaGATGACGCACGGGCAGAAAACCCAGCTATCCACC +
Preference number: 3 (lower is better)
Translates to: LGTAQDGSQCKA*MTHGQKTQLST
Trigger: GGTGGATAGCTGGGTTTTCTGCCCGTGCGTCATTCATGCTTTACATTGTGACCCATCTTGGGCTGTTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
ENSMUST00000184951.8
3UTR TCA 72 bp ATCAAAAGCCTGAGCCCTGGCCCTGTAAATCAACTGTaGGAGCTCAGACGACTCTGTCTGCAGACTCAGAGC +
Preference number: 3 (lower is better)
Translates to: IKSLSPGPVNQL*ELRRLCLQTQS
Trigger: GCTCTGAGTCTGCAGACAGAGTCGTCTGAGCTCTCACAGTTGATTTACAGGGCCAGGGCTCAGGCTTTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
3UTR TCA 72 bp ACTGTTGGCTGTACCTGGAAGCTGGGACTGACTGACTaGGGCCACTGTGACAGTGTTCTCTTCGTCTACAGT +
Preference number: 3 (lower is better)
Translates to: TVGCTWKLGLTD*GHCDSVLFVYS
Trigger: ACTGTAGACGAAGAGAACACTGTCACAGTGGCCTCAGTCAGTCAGTCCCAGCTTCCAGGTACAGCCAACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR GCA 72 bp GAGTCTGGGGAAAAGGATATTCTGTCGTCAAGAGCATaGAGAAAGCCATGGGCTTGGATCCCTGCGACATGC +
Preference number: 3 (lower is better)
Translates to: ESGEKDILSSRA*RKPWAWIPATC
Trigger: GCATGTCGCAGGGATCCAAGCCCATGGCTTTCTGCATGCTCTTGACGACAGAATATCCTTTTCCCCAGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR CCA 72 bp AGACGACTCTGTCTGCAGACTCAGAGCACAAATATGTaGGTGCTGGGTTCGCACTGGTCACCAGAAAGTGAG +
Preference number: 3 (lower is better)
Translates to: RRLCLQTQSTNM*VLGSHWSPESE
Trigger: CTCACTTTCTGGTGACCAGTGCGAACCCAGCACCCACATATTTGTGCTCTGAGTCTGCAGACAGAGTCGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
ENSMUST00000184951.8
3UTR CCA 72 bp TGCCCTCACACACGAGGCAAGCACGCTACCACCACGTaGACAACACTCTCAGCTTGTCAATTCTGCATATCA +
Preference number: 3 (lower is better)
Translates to: CPHTRGKHATTT*TTLSACQFCIS
Trigger: TGATATGCAGAATTGACAAGCTGAGAGTGTTGTCCACGTGGTGGTAGCGTGCTTGCCTCGTGTGTGAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
3UTR CCA 72 bp CTTTGTGAAGCCGAAGTCTGTCTCTTCGGTCTCTGCTaGGCACATTTCTCTGGGGAACGGCCTGTATTGACT +
Preference number: 3 (lower is better)
Translates to: LCEAEVCLFGLC*AHFSGERPVLT
Trigger: AGTCAATACAGGCCGTTCCCCAGAGAAATGTGCCCAGCAGAGACCGAAGAGACAGACTTCGGCTTCACAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR-3UTR CAA 90 bp ACAGACAGGATACTTGCTGCTCCTAGCTGGGAACAGCTTCTCCTGCCCACACAGAGCTCAGAAGACAACTaGAGGGAGTCGTTTCTCTCT +
Preference number: 3 (lower is better)
Translates to: TDRILAAPSWEQLLLPTQSSEDN*RESFLS
Trigger: AGAGAGAAACGACTCCCTCAAGTTGTCTTCTGAGCT...CTGTGTGGGCAGGAGAAGCTGTTCCCAGCTAGGAGCAGCAAGTATCCTGTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
ENSMUST00000184951.8
3UTR-3UTR CAA 90 bp CTTCATGCGTATGGCTCCTGGATCAAGAGTCAGGACCTGGCTCAGGGGCCTCTCCAGACTTACCACTATTaGCTTTCCCACTGTACACTT +
Preference number: 3 (lower is better)
Translates to: LHAYGSWIKSQDLAQGPLQTYHY*LSHCTL
Trigger: AAGTGTACAGTGGGAAAGCAAATAGTGGTAAGTCTG...GAGAGGCCCCTGAGCCAGGTCCTGACTCTTGATCCAGGAGCCATACGCATGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR CAA 90 bp TTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAGGGAGCTCAGAAGACAACTaGAGGGAGTCGTTTCTCTCT +
Preference number: 3 (lower is better)
Translates to: LQRIREWHPGDGLKSAAGSSEDN*RESFLS
Trigger: AGAGAGAAACGACTCCCTCAAGTTGTCTTCTGAGCT...CCCTGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
ENSMUST00000184951.8
3UTR-3UTR CAA 90 bp ATGCTCCTTTGGCTTCATGCGTATGGCTCCTGGATCAAGAGTCAGGACCTGGCTAGAAAAGAAGCCCATTaGGGTTTCTGCAGACACCTG +
Preference number: 3 (lower is better)
Translates to: MLLWLHAYGSWIKSQDLARKEAH*GFCRHL
Trigger: CAGGTGTCTGCAGAAACCCAAATGGGCTTCTTTTCT...AGCCAGGTCCTGACTCTTGATCCAGGAGCCATACGCATGAAGCCAAAGGAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR CAA 90 bp TCCTCTGTATGTGCCTGCTTTGACTGGTTCTGCTTCAGCCTCTGTGCCCAGGATAGAAAAGAAGCCCATTaGGGTTTCTGCAGACACCTG +
Preference number: 3 (lower is better)
Translates to: SSVCACFDWFCFSLCAQDRKEAH*GFCRHL
Trigger: CAGGTGTCTGCAGAAACCCAAATGGGCTTCTTTTCT...ATCCTGGGCACAGAGGCTGAAGCAGAACCAGTCAAAGCAGGCACATACAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR TCA 72 bp CTTCTCCTCCAGTTTCCAGTAAGTCAGCCCTGTTCCTaGATCAGACAACCAAGAACTTGGGCTTTCGGCTGG +
Preference number: 3 (lower is better)
Translates to: LLLQFPVSQPCS*IRQPRTWAFGW
Trigger: CCAGCCGAAAGCCCAAGTTCTTGGTTGTCTGATTCAGGAACAGGGCTGACTTACTGGAAACTGGAGGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR TCA 72 bp GAACCCAGACACCTGGGAAGGATTATGACTTGCTTGTaGAGACGAGTCAGTGTCAGAGTGACGAGACAGGCT +
Preference number: 3 (lower is better)
Translates to: EPRHLGRIMTCL*RRVSVRVTRQA
Trigger: AGCCTGTCTCGTCACTCTGACACTGACTCGTCTTCACAAGCAAGTCATAATCCTTCCCAGGTGTCTGGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR GCA 72 bp GGCCAGAAAGATAGTTTAGTGGTTGAGAGCACTGACTaGTCTTCCAGAGGGCCTAGGTTCAATTCCCAGCAC +
Preference number: 3 (lower is better)
Translates to: GQKDSLVVESTD*SSRGPRFNSQH
Trigger: GTGCTGGGAATTGAACCTAGGCCCTCTGGAAGAGCAGTCAGTGCTCTCAACCACTAAACTATCTTTCTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR GCA 72 bp CTCAAGTGTGCGCACTCGACTAGTAGCTTCATTCAATaGACTATCCAGCTGGCCACACCTGTCCGCAAGAAT +
Preference number: 3 (lower is better)
Translates to: LKCAHSTSSFIQ*TIQLATPVRKN
Trigger: ATTCTTGCGGACAGGTGTGGCCAGCTGGATAGTGCATTGAATGAAGCTACTAGTCGAGTGCGCACACTTGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
3UTR CCA 72 bp TATGTCTGGCACTCGATGGCAGGCCCCTCTTGCAGGTaGTCGACAGCTTTTAGAGGTCTAATCATGGAACTT +
Preference number: 3 (lower is better)
Translates to: YVWHSMAGPSCR*STAFRGLIMEL
Trigger: AAGTTCCATGATTAGACCTCTAAAAGCTGTCGACCACCTGCAAGAGGGGCCTGCCATCGAGTGCCAGACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR CCA 72 bp AGAGTGACGAGACAGGCTTGGTTCCAGAACGGAGTCTaGGGAAAAGGATATTCTGTCGTCAAGAGCATGCAG +
Preference number: 3 (lower is better)
Translates to: RVTRQAWFQNGV*GKGYSVVKSMQ
Trigger: CTGCATGCTCTTGACGACAGAATATCCTTTTCCCCAGACTCCGTTCTGGAACCAAGCCTGTCTCGTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR CAA 90 bp CCTCTGTATGTGCCTGCTTTGACTGGTTCTGCTTCAGCCTCTGTGCCCAGGATGCAGACTTACCACTATTaGCTTTCCCACTGTACACTT +
Preference number: 3 (lower is better)
Translates to: PLYVPALTGSASASVPRMQTYHY*LSHCTL
Trigger: AAGTGTACAGTGGGAAAGCAAATAGTGGTAAGTCTG...CATCCTGGGCACAGAGGCTGAAGCAGAACCAGTCAAAGCAGGCACATACAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR CAA 90 bp CTACTTTCCCTTTGGAATGCATGGTTTTTCCAAGTGTCCACAGGTGATGCTCTCCTGCGACATGCTCCTTaGGCTTCATGCGTATGGCTC +
Preference number: 3 (lower is better)
Translates to: LLSLWNAWFFQVSTGDALLRHAP*ASCVWL
Trigger: GAGCCATACGCATGAAGCCAAAGGAGCATGTCGCAG...GAGAGCATCACCTGTGGACACTTGGAAAAACCATGCATTCCAAAGGGAAAGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR TCA 72 bp ACGTGCCAGTGTGTATGTAGAGCTCAGAAGACAACTTaGGGGAGTCGTTTCTCTCTTTCTAACGCGTGGGTC +
Preference number: 3 (lower is better)
Translates to: TCQCVCRAQKTT*GSRFSLSNAWV
Trigger: GACCCACGCGTTAGAAAGAGAGAAACGACTCCCTCAAGTTGTCTTCTGAGCTCTACATACACACTGGCACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
ENSMUST00000184951.8
3UTR TCA 72 bp GGCTTTAATCAGACTGGCAACATACAAAAGTGTGCGTaGCCCACTGATGAATGTAACTTCCGAGGGTCCCCG +
Preference number: 3 (lower is better)
Translates to: GFNQTGNIQKCA*PTDECNFRGSP
Trigger: CGGGGACCCTCGGAAGTTACATTCATCAGTGGGTCACGCACACTTTTGTATGTTGCCAGTCTGATTAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR GCA 72 bp CATATTTATGTCTGGCACTCGATGGCAGGCCCCTCTTaGAGGTGGTCGACAGCTTTTAGAGGTCTAATCATG +
Preference number: 3 (lower is better)
Translates to: HIYVWHSMAGPS*RWSTAFRGLIM
Trigger: CATGATTAGACCTCTAAAAGCTGTCGACCACCTGCAAGAGGGGCCTGCCATCGAGTGCCAGACATAAATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR GCA 72 bp CAAAAAGCACGATGGAAGGTGCTAGAATATGGTCCCTaGTCTCACGGAGCTCACAACTTCAGTACTCCATCC +
Preference number: 3 (lower is better)
Translates to: QKARWKVLEYGP*SHGAHNFSTPS
Trigger: GGATGGAGTACTGAAGTTGTGAGCTCCGTGAGAGCAGGGACCATATTCTAGCACCTTCCATCGTGCTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR CCA 72 bp TGTCCACAGGTGATGCTCTCGTGGTTGAAGGATACTTaGAGAACCCAGACACCTGGGAAGGATTATGACTTG +
Preference number: 3 (lower is better)
Translates to: CPQVMLSWLKDT*RTQTPGKDYDL
Trigger: CAAGTCATAATCCTTCCCAGGTGTCTGGGTTCTCCAAGTATCCTTCAACCACGAGAGCATCACCTGTGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR CCA 72 bp ATGGTGGAGCTGGTCCTACTTTCCCTTTGGAATGCATaGTTTTTCCAAGTGTCCACAGGTGATGCTCTCGTG +
Preference number: 3 (lower is better)
Translates to: MVELVLLSLWNA*FFQVSTGDALV
Trigger: CACGAGAGCATCACCTGTGGACACTTGGAAAAACCATGCATTCCAAAGGGAAAGTAGGACCAGCTCCACCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR TCA 72 bp CTTCCTCCAGATCCTGCAGGCGACACTTTAGCCGAGTaGTGGTGTTATCTTTCTCCTTATTGCTTGTCCTCA +
Preference number: 3 (lower is better)
Translates to: LPPDPAGDTLAE*WCYLSPYCLSS
Trigger: TGAGGACAAGCAATAAGGAGAAAGATAACACCATCACTCGGCTAAAGTGTCGCCTGCAGGATCTGGAGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR TCA 72 bp CTCGTGCTCTGCCTGCTTCACCTGAGCCTCAAGCTTTaGGATTGTCCTTTTCAAGTCAGAAATCTGAGTGTG +
Preference number: 3 (lower is better)
Translates to: LVLCLLHLSLKL*DCPFQVRNLSV
Trigger: CACACTCAGATTTCTGACTTGAAAAGGACAATCTCAAAGCTTGAGGCTCAGGTGAAGCAGGCAGAGCACGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR TCA 72 bp AGACTCAGCATACTCTCGTGCTCTGCCTGCTTCACCTaGGCCTCAAGCTTTGAGATTGTCCTTTTCAAGTCA +
Preference number: 3 (lower is better)
Translates to: RLSILSCSACFT*ASSFEIVLFKS
Trigger: TGACTTGAAAAGGACAATCTCAAAGCTTGAGGCTCAGGTGAAGCAGGCAGAGCACGAGAGTATGCTGAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR TCA 72 bp TCTGCTGGGCACATTTCTCTGGGGAACGGCCTGTATTaGCTGAAGGCTCAGTTTGCCGAGAATTCACTAATT +
Preference number: 3 (lower is better)
Translates to: SAGHISLGNGLY*LKAQFAENSLI
Trigger: AATTAGTGAATTCTCGGCAAACTGAGCCTTCAGTCAATACAGGCCGTTCCCCAGAGAAATGTGCCCAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR TCA 72 bp GGCTTGTCTCGTGGACACTTTCTTCAGTCCATTTGGTaGGTGTTCAGGACAAGAGCTAGGATTAACAGGGTC +
Preference number: 3 (lower is better)
Translates to: GLSRGHFLQSIW*VFRTRARINRV
Trigger: GACCCTGTTAATCCTAGCTCTTGTCCTGAACACTCACCAAATGGACTGAAGAAAGTGTCCACGAGACAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR CCA 72 bp TTGAGTGCAAAAAGCACGATGGAAGGTGCTAGAATATaGTCCCTGCTCTCACGGAGCTCACAACTTCAGTAC +
Preference number: 3 (lower is better)
Translates to: LSAKSTMEGARI*SLLSRSSQLQY
Trigger: GTACTGAAGTTGTGAGCTCCGTGAGAGCAGGGACCATATTCTAGCACCTTCCATCGTGCTTTTTGCACTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR-3UTR CAA 90 bp CCAAAGTTTCAGGCAAAGAGTGATACATGTCCTTCTCCTCCAGTTTCCAGTAAGCTGTATGTGCCTGCTTaGACTGGTTCTGCTTCAGCC +
Preference number: 3 (lower is better)
Translates to: PKFQAKSDTCPSPPVSSKLYVPA*TGSASA
Trigger: GGCTGAAGCAGAACCAGTCAAAGCAGGCACATACAG...CTTACTGGAAACTGGAGGAGAAGGACATGTATCACTCTTTGCCTGAAACTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR-3UTR CAA 90 bp CTACTTTCCCTTTGGAATGCATGGTTTTTCCAAGTGTCCACAGGTGATGCTCTCAGCTCAGAAGACAACTaGAGGGAGTCGTTTCTCTCT +
Preference number: 3 (lower is better)
Translates to: LLSLWNAWFFQVSTGDALSSEDN*RESFLS
Trigger: AGAGAGAAACGACTCCCTCAAGTTGTCTTCTGAGCT...GAGAGCATCACCTGTGGACACTTGGAAAAACCATGCATTCCAAAGGGAAAGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR-3UTR CAA 90 bp CATGGAACTTTTGAAGGAAACGGTACTGTAGTCAAGCCAACATTAAACCATAGTAGCTCAGTGGCAGAGTaGCCTAGCGTGTGCAAGACC +
Preference number: 3 (lower is better)
Translates to: HGTFEGNGTVVKPTLNHSSSVAE*PSVCKT
Trigger: GGTCTTGCACACGCTAGGCAACTCTGCCACTGAGCT...ACTATGGTTTAATGTTGGCTTGACTACAGTACCGTTTCCTTCAAAAGTTCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR-3UTR CAA 90 bp CTCTTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAAAGTCCATATTGCTCTaGGCAGAACAGGAAATCATT +
Preference number: 3 (lower is better)
Translates to: LLQRIREWHPGDGLKSAAKSILL*AEQEII
Trigger: AATGATTTCCTGTTCTGCCAAGAGCAATATGGACTT...TGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR TCA 72 bp CTTGTTTTCTTGTCTCAGCCTCGCTTCCTTATCATCTaGGAGCTTGTAAGCATTCTCGAAGGCTTCCTCCAG +
Preference number: 3 (lower is better)
Translates to: LVFLSQPRFLII*ELVSILEGFLQ
Trigger: CTGGAGGAAGCCTTCGAGAATGCTTACAAGCTCTCAGATGATAAGGAAGCGAGGCTGAGACAAGAAAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR TCA 72 bp TCTTTGCCGAGGGATTCGTACTCTCCTAAGAGATCCTaGAACATCTTGTTTTCTTGTCTCAGCCTCGCTTCC +
Preference number: 3 (lower is better)
Translates to: SLPRDSYSPKRS*NILFSCLSLAS
Trigger: GGAAGCGAGGCTGAGACAAGAAAACAAGATGTTTCAGGATCTCTTAGGAGAGTACGAATCCCTCGGCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR-3UTR CAA 90 bp TGTCTCAAGTTTAATGGCTACCAGTCTCAAAGATTTGCAGAGCTGCGCAAAACAGTGATGCTCTCGTGGTaGAAGGATACTTGGAGAACC +
Preference number: 3 (lower is better)
Translates to: CLKFNGYQSQRFAELRKTVMLSW*KDTWRT
Trigger: GGTTCTCCAAGTATCCTTCAACCACGAGAGCATCAC...TGTTTTGCGCAGCTCTGCAAATCTTTGAGACTGGTAGCCATTAAACTTGAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR TCA 72 bp AGGTCTTCAGGCTTAGCGGCAAGCACTTTTACCTGCTaGACCTTCTTGCTGGCCCAATTATTCTACTATTCA +
Preference number: 3 (lower is better)
Translates to: RSSGLAASTFTC*TFLLAQLFYYS
Trigger: TGAATAGTAGAATAATTGGGCCAGCAAGAAGGTTCAGCAGGTAAAAGTGCTTGCCGCTAAGCCTGAAGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
ENSMUST00000184951.8
3UTR TCA 72 bp TTTTTAACCATTGACTTACTGGGGTGGGAAGGGATGTaGACGTGCCAGTGTGTATGTAGAGCTCAGAAGACA +
Preference number: 3 (lower is better)
Translates to: FLTIDLLGWEGM*TCQCVCRAQKT
Trigger: TGTCTTCTGAGCTCTACATACACACTGGCACGTTCACATCCCTTCCCACCCCAGTAAGTCAATGGTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
ENSMUST00000184951.8
3UTR TCA 72 bp GTTCCTGCAAAACTTTGGAGGCACTGCTGGCTGCATTaGAGCGTTCTCTCAAGTCACTCACTTCTATTTCTA +
Preference number: 3 (lower is better)
Translates to: VPAKLWRHCWLH*SVLSSHSLLFL
Trigger: TAGAAATAGAAGTGAGTGACTTGAGAGAACGCTTCAATGCAGCCAGCAGTGCCTCCAAAGTTTTGCAGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
3UTR TCA 72 bp TACCAGTCTCAAAGATTTGCAGAGCTGCGCAAAACATaGAACTTCTTGAGGGTCATTCGAACTGAGCCCAGT +
Preference number: 3 (lower is better)
Translates to: YQSQRFAELRKT*NFLRVIRTEPS
Trigger: ACTGGGCTCAGTTCGAATGACCCTCAAGAAGTTTCATGTTTTGCGCAGCTCTGCAAATCTTTGAGACTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR GCA 72 bp AATTCGTTCCTGCAAAACTTTGGAGGCACTGCTGGCTaGATTGAAGCGTTCTCTCAAGTCACTCACTTCTAT +
Preference number: 3 (lower is better)
Translates to: NSFLQNFGGTAG*IEAFSQVTHFY
Trigger: ATAGAAGTGAGTGACTTGAGAGAACGCTTCAATGCAGCCAGCAGTGCCTCCAAAGTTTTGCAGGAACGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
3UTR CCA 72 bp AGTCATCTAGCAGAAACTGGAGCTGCTTCTTTGCAGTaGTTTGTTGTAACGTGGACACAGGAACGGTATCTA +
Preference number: 3 (lower is better)
Translates to: SHLAETGAASLQ*FVVTWTQERYL
Trigger: TAGATACCGTTCCTGTGTCCACGTTACAACAAACCACTGCAAAGAAGCAGCTCCAGTTTCTGCTAGATGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR-3UTR CAA 90 bp TTTAAGACTGCTACCCTGCCCACTTTTAGGCTGAGCTGCTTTTTAGCTGAGTGTCAGACTTACCACTATTaGCTTTCCCACTGTACACTT +
Preference number: 3 (lower is better)
Translates to: FKTATLPTFRLSCFLAECQTYHY*LSHCTL
Trigger: AAGTGTACAGTGGGAAAGCAAATAGTGGTAAGTCTG...ACACTCAGCTAAAAAGCAGCTCAGCCTAAAAGTGGGCAGGGTAGCAGTCTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR GCA 72 bp TCCTTATTGCTTGTCCTCATTTCTTCAATTCGTTCCTaGAAAACTTTGGAGGCACTGCTGGCTGCATTGAAG +
Preference number: 3 (lower is better)
Translates to: SLLLVLISSIRS*KTLEALLAALK
Trigger: CTTCAATGCAGCCAGCAGTGCCTCCAAAGTTTTGCAGGAACGAATTGAAGAAATGAGGACAAGCAATAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR GCA 72 bp TTGTGTTTAATGTATCCTTTACTCGCCCGTGTTCTTTaGCGAGGGATTCGTACTCTCCTAAGAGATCCTGAA +
Preference number: 3 (lower is better)
Translates to: LCLMYPLLARVL*RGIRTLLRDPE
Trigger: TTCAGGATCTCTTAGGAGAGTACGAATCCCTCGGCAAAGAACACGGGCGAGTAAAGGATACATTAAACACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR CCA 72 bp ACTCGACTAGTAGCTTCATTCAATGCACTATCCAGCTaGCCACACCTGTCCGCAAGAATTTCATTTTTCTTC +
Preference number: 3 (lower is better)
Translates to: TRLVASFNALSS*PHLSARISFFF
Trigger: GAAGAAAAATGAAATTCTTGCGGACAGGTGTGGCCAGCTGGATAGTGCATTGAATGAAGCTACTAGTCGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
3UTR CCA 72 bp ACTGGAGCTGCTTCTTTGCAGTGGTTTGTTGTAACGTaGACACAGGAACGGTATCTAAATCATCCAAAAGGA +
Preference number: 3 (lower is better)
Translates to: TGAASLQWFVVT*TQERYLNHPKG
Trigger: TCCTTTTGGATGATTTAGATACCGTTCCTGTGTCCACGTTACAACAAACCACTGCAAAGAAGCAGCTCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
3UTR-3UTR CAA 90 bp AGTACATCCCAGCATAGAAACAGTTTGCCTCTCTTGGGTAACAGATGCTCTTTACAGCATAGAAACAGTTaGCCTCTCTTGGGTAACAGA +
Preference number: 3 (lower is better)
Translates to: STSQHRNSLPLLGNRCSLQHRNS*PLLGNR
Trigger: TCTGTTACCCAAGAGAGGCAAACTGTTTCTATGCTG...TAAAGAGCATCTGTTACCCAAGAGAGGCAAACTGTTTCTATGCTGGGATGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
3UTR CCA 72 bp TACAAAATCATCAACCTTAAAAAGAAATCACTGGGTTaGGAACATAGCTCAGTGGCAGAGTTGCCTAGCGTG +
Preference number: 3 (lower is better)
Translates to: YKIINLKKKSLG*EHSSVAELPSV
Trigger: CACGCTAGGCAACTCTGCCACTGAGCTATGTTCCCAACCCAGTGATTTCTTTTTAAGGTTGATGATTTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR CCA 72 bp TTTTCTTCTTCCACTCTTCAACGGCAGAAATGTCTTTaGCCTCCAGTTTCTGTTTCAGACTACTTATCTCCG +
Preference number: 3 (lower is better)
Translates to: FSSSTLQRQKCL*PPVSVSDYLSP
Trigger: CGGAGATAAGTAGTCTGAAACAGAAACTGGAGGCCAAAGACATTTCTGCCGTTGAAGAGTGGAAGAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
3UTR CCA 72 bp GACTGTACAAAATCATCAACCTTAAAAAGAAATCACTaGGTTGGGAACATAGCTCAGTGGCAGAGTTGCCTA +
Preference number: 3 (lower is better)
Translates to: DCTKSSTLKRNH*VGNIAQWQSCL
Trigger: TAGGCAACTCTGCCACTGAGCTATGTTCCCAACCCAGTGATTTCTTTTTAAGGTTGATGATTTTGTACAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR-3UTR CAA 90 bp CTTCAAAAACCAAAGCTTACGCTTTCTAAGGAGCGCAGATGTTCTGATGGCGTTAGGTACATTTCCTTCTaGTTGATAGAAATTGGAGAC +
Preference number: 3 (lower is better)
Translates to: LQKPKLTLSKERRCSDGVRYISF*LIEIGD
Trigger: GTCTCCAATTTCTATCAACAAGAAGGAAATGTACCT...AACGCCATCAGAACATCTGCGCTCCTTAGAAAGCGTAAGCTTTGGTTTTTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
3UTR-3UTR CAA 90 bp TGTCTTTGGCCTCCAGTTTCTGTTTCAGACTACTTATCTCCGACTCATAATAAGTCTTCGTCTACAGTTTaGACTGAGATATCGTTGCTA +
Preference number: 3 (lower is better)
Translates to: CLWPPVSVSDYLSPTHNKSSSTV*TEISLL
Trigger: TAGCAACGATATCTCAGTCAAAACTGTAGACGAAGA...CTTATTATGAGTCGGAGATAAGTAGTCTGAAACAGAAACTGGAGGCCAAAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
CDS-3UTR CCA 90 bp ATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAGGGCCCTGGGGAGCTGGGTGCTGCCCCTaGGAAGCTGCCCCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: IREWHPGDGLKSAAGPWGAGCCP*EAAPGS
Trigger: GGAGCCGGGGGCAGCTTCCCAGGGGCAGCACCCAGC...TCCCCAGGGCCCTGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
3UTR CAA 72 bp GCCCCCGGCTCCAAGGGCTCGGTGGGCTCCTTAGCCTaGTGGGTGTTCATGTCCAGGATGCAGAAGGTGCCG +
Preference number: 4 (lower is better)
Translates to: APGSKGSVGSLA*WVFMSRMQKVP
Trigger: CGGCACCTTCTGCATCCTGGACATGAACACCCACAAGGCTAAGGAGCCCACCGAGCCCTTGGAGCCGGGGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
CDS-3UTR CCA 90 bp TTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAGGGGCTGGGTGCTGCCCCTaGGAAGCTGCCCCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: LQRIREWHPGDGLKSAAGAGCCP*EAAPGS
Trigger: GGAGCCGGGGGCAGCTTCCCAGGGGCAGCACCCAGC...CCCTGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp GCTCTTACCGTGGAAGTGCTTTTCTCTTTGGCAAGGGTGGGGGTGGGTGGGTCAACCACAGAGGCTGGGTaGTGCCCCTGGGAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: ALTVEVLFSLARVGVGGSTTEAG*CPWEAA
Trigger: GGCAGCTTCCCAGGGGCAGCACCCAGCCTCTGTGGT...TGACCCACCCACCCCCACCCTTGCCAAAGAGAAAAGCACTTCCACGGTAAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp GTCGCAACACAGACAGGATACTTGCTGCTCCTAGCTGGGAACAGCTTCTCCTGCGGCTGCTGCACCCCCTaGAGGGCCATGTGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: VATQTGYLLLLAGNSFSCGCCTP*RAMCLH
Trigger: GTGCAGGCACATGGCCCTGCAGGGGGTGCAGCAGCC...GCAGGAGAAGCTGTTCCCAGCTAGGAGCAGCAAGTATCCTGTCTGTGTTGCGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp ATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAGGGCCCTGGGGAACTTCCACTGTCCCTTaGATGACAGGTGGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: IREWHPGDGLKSAAGPWGTSTVP*MTGGPV
Trigger: GACCGGGCCACCTGTCATTCAAGGGACAGTGGAAGT...TCCCCAGGGCCCTGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp GAGGGCCTAGGTTCAATTCCCAGCACTCACATGTCAGCTCACACCACCAATGCAACAGAGGCTGGGTGCTaGCCCTGGGAAGCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: EGLGSIPSTHMSAHTTNATEAGC*PWEAAP
Trigger: GGGGGCAGCTTCCCAGGGGCAGCACCCAGCCTCTGT...TGCATTGGTGGTGTGAGCTGACATGTGAGTGCTGGGAATTGAACCTAGGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR GCA 90 bp ATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAGGGCCCTGGGGAGAAGTTTATGGCTGCTaGACCCCCTGCAGGGCCATG +
Preference number: 4 (lower is better)
Translates to: IREWHPGDGLKSAAGPWGEVYGC*TPCRAM
Trigger: CATGGCCCTGCAGGGGGTGCAGCAGCCATAAACTTC...TCCCCAGGGCCCTGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp GTCGCAACACAGACAGGATACTTGCTGCTCCTAGCTGGGAACAGCTTCTCCTGCCTGCACCACAGAGGCTaGGTGCTGCCCCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: VATQTGYLLLLAGNSFSCLHHRG*VLPLGS
Trigger: GCTTCCCAGGGGCAGCACCCAGCCTCTGTGGTGCAG...GCAGGAGAAGCTGTTCCCAGCTAGGAGCAGCAAGTATCCTGTCTGTGTTGCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp GCTCTGAGCGCAGACCAATGGCTCTTACCGTGGAAGTGCTTTTCTCTTTGGCAAACAGAGGCTGGGTGCTaGCCCTGGGAAGCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: ALSADQWLLPWKCFSLWQTEAGC*PWEAAP
Trigger: GGGGGCAGCTTCCCAGGGGCAGCACCCAGCCTCTGT...TTGCCAAAGAGAAAAGCACTTCCACGGTAAGAGCCATTGGTCTGCGCTCAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp CTCTTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAGGCTGCTGCACCCCCTaGAGGGCCATGTGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: LLQRIREWHPGDGLKSAAGCCTP*RAMCLH
Trigger: GTGCAGGCACATGGCCCTGCAGGGGGTGCAGCAGCC...TGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp GAGGGCCTAGGTTCAATTCCCAGCACTCACATGTCAGCTCACACCACCAATGCACTGCACCACAGAGGCTaGGTGCTGCCCCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: EGLGSIPSTHMSAHTTNALHHRG*VLPLGS
Trigger: GCTTCCCAGGGGCAGCACCCAGCCTCTGTGGTGCAG...TGCATTGGTGGTGTGAGCTGACATGTGAGTGCTGGGAATTGAACCTAGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR TCA 90 bp GCTCTTACCGTGGAAGTGCTTTTCTCTTTGGCAAGGGTGGGGGTGGGTGGGTCATGGGTAGGATGTGGATaGTGCTGGCTGTGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: ALTVEVLFSLARVGVGGSWVGCG*CWLCLG
Trigger: CCCGAGACACAGCCAGCATCATCCACATCCTACCCA...TGACCCACCCACCCCCACCCTTGCCAAAGAGAAAAGCACTTCCACGGTAAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp TCCTGGAGCCATCCCTCAAAGCTCCCGCAGAGTGGCTTTGTGAGAAGAGAGGGGGACACTGCTCCAGGCTaGCTGACTTACTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SWSHPSKLPQSGFVRREGDTAPG*LTYSSP
Trigger: GGGAGAAGAGTAAGTCAGTCAGCCTGGAGCAGTGTC...CCCCTCTCTTCTCACAAAGCCACTCTGCGGGAGCTTTGAGGGATGGCTCCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR GCA 90 bp AGCTCAGACGACTCTGTCTGCAGACTCAGAGCACAAATATGTGGGTGCTGGGTTCCCTGCAGGGCCATGTaGCTGCACCACAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SSDDSVCRLRAQICGCWVPCRAM*LHHRGW
Trigger: CCAGCCTCTGTGGTGCAGGCACATGGCCCTGCAGGG...AACCCAGCACCCACATATTTGTGCTCTGAGTCTGCAGACAGAGTCGTCTGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp TCCTGGAGCCATCCCTCAAAGCTCCCGCAGAGTGGCTTTGTGAGAAGAGAGGGGGCATGCAGAAAGCCATaGGCTTGGATCCCTGCGACA +
Preference number: 4 (lower is better)
Translates to: SWSHPSKLPQSGFVRREGACRKP*AWIPAT
Trigger: TGTCGCAGGGATCCAAGCCCATGGCTTTCTGCATGC...CCCCTCTCTTCTCACAAAGCCACTCTGCGGGAGCTTTGAGGGATGGCTCCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR CCA 90 bp TTCAGGGGTCTGTGTGAAGAAGTTTATGGCTGCTGCACCCCCTGCAGGGCCATGTGGAACTGCTCCTGCTaGGCGACAATCTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: FRGLCEEVYGCCTPCRAMWNCSC*ATICSW
Trigger: CCAGGAGCAGATTGTCGCCCAGCAGGAGCAGTTCCA...CATGGCCCTGCAGGGGGTGCAGCAGCCATAAACTTCTTCACACAGACCCCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000130502.8
CDS-3UTR TCA 90 bp GCTCTTACCGTGGAAGTGCTTTTCTCTTTGGCAAGGGTGGGGGTGGGTGGGTCAGACACTGCTCCAGGCTaGCTGACTTACTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: ALTVEVLFSLARVGVGGSDTAPG*LTYSSP
Trigger: GGGAGAAGAGTAAGTCAGTCAGCCTGGAGCAGTGTC...TGACCCACCCACCCCCACCCTTGCCAAAGAGAAAAGCACTTCCACGGTAAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp ACAGACAGGATACTTGCTGCTCCTAGCTGGGAACAGCTTCTCCTGCCCACACAGCCAGGATGCAGAAGGTaGCGTAGCCACTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: TDRILAAPSWEQLLLPTQPGCRR*RSHCSL
Trigger: CAGTGAGCAGTGGCTACGGCACCTTCTGCATCCTGG...CTGTGTGGGCAGGAGAAGCTGTTCCCAGCTAGGAGCAGCAAGTATCCTGTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp AGAAAGCCATGGGCTTGGATCCCTGCGACATGCTCCTTTGGCTTCATGCGTATGACTTCCACTGTCCCTTaGATGACAGGTGGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: RKPWAWIPATCSFGFMRMTSTVP*MTGGPV
Trigger: GACCGGGCCACCTGTCATTCAAGGGACAGTGGAAGT...CATACGCATGAAGCCAAAGGAGCATGTCGCAGGGATCCAAGCCCATGGCTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141203.8
ENSMUST00000147737.8
CDS-3UTR TCA 90 bp ATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAGGGCCCTGGGGAGTTTCAGGCAAAGAGTaGTACATGTCCTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: IREWHPGDGLKSAAGPWGVSGKE*YMSFSS
Trigger: GGAGGAGAAGGACATGTATCACTCTTTGCCTGAAAC...TCCCCAGGGCCCTGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp ACAGACAGGATACTTGCTGCTCCTAGCTGGGAACAGCTTCTCCTGCCCACACAGCTGGGACTGACTGACTaGGGCCACTGTGACAGTGTT +
Preference number: 4 (lower is better)
Translates to: TDRILAAPSWEQLLLPTQLGLTD*GHCDSV
Trigger: AACACTGTCACAGTGGCCTCAGTCAGTCAGTCCCAG...CTGTGTGGGCAGGAGAAGCTGTTCCCAGCTAGGAGCAGCAAGTATCCTGTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp GCTCTTACCGTGGAAGTGCTTTTCTCTTTGGCAAGGGTGGGGGTGGGTGGGTCAGGAGGCACTGCTGGCTaGATTGAAGCGTTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: ALTVEVLFSLARVGVGGSGGTAG*IEAFSQ
Trigger: TTGAGAGAACGCTTCAATGCAGCCAGCAGTGCCTCC...TGACCCACCCACCCCCACCCTTGCCAAAGAGAAAAGCACTTCCACGGTAAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp ACAGACAGGATACTTGCTGCTCCTAGCTGGGAACAGCTTCTCCTGCCCACACAGCATACTCTCGTGCTCTaGCTGCTTCACCTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: TDRILAAPSWEQLLLPTQHTLVL*LLHLSL
Trigger: GAGGCTCAGGTGAAGCAGGCAGAGCACGAGAGTATG...CTGTGTGGGCAGGAGAAGCTGTTCCCAGCTAGGAGCAGCAAGTATCCTGTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp ATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAGGGCCCTGGGGAGAAAAGAAGCCCATTTaGGTTTCTGCAGACACCTGC +
Preference number: 4 (lower is better)
Translates to: IREWHPGDGLKSAAGPWGEKKPI*VSADTC
Trigger: GCAGGTGTCTGCAGAAACCCAAATGGGCTTCTTTTC...TCCCCAGGGCCCTGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp GTCGCAACACAGACAGGATACTTGCTGCTCCTAGCTGGGAACAGCTTCTCCTGCGGAGTACTCCGCTCCTaGAATCAGCCACTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VATQTGYLLLLAGNSFSCGVLRS*NQPLPP
Trigger: AGGAGGAAGTGGCTGATTCCAGGAGCGGAGTACTCC...GCAGGAGAAGCTGTTCCCAGCTAGGAGCAGCAAGTATCCTGTCTGTGTTGCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
3UTR CAA 72 bp GCACGAAGGTCGGCCACGTGTCGGGCATGCTTCTCCTaGAGGTTCTGCCTGATCTTAGACAACATCACAGGA +
Preference number: 4 (lower is better)
Translates to: ARRSATCRACFS*RFCLILDNITG
Trigger: TCCTGTGATGTTGTCTAAGATCAGGCAGAACCTCAAGGAGAAGCATGCCCGACACGTGGCCGACCTTCGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
CDS-3UTR TCA 90 bp AGCTGGGAACAGCTTCTCCTGCCCACACAGCGCTCTTACAGAGAATTAGGGAATTGGCCCGGTCTTCCCTaGGAAAGAGGACACCCCATT +
Preference number: 4 (lower is better)
Translates to: SWEQLLLPTQRSYRELGNWPGLP*ERGHPI
Trigger: AATGGGGTGTCCTCTTTCTCAGGGAAGACCGGGCCA...ATTCCCTAATTCTCTGTAAGAGCGCTGTGTGGGCAGGAGAAGCTGTTCCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp AGCTGGGAACAGCTTCTCCTGCCCACACAGCGCTCTTACAGAGAATTAGGGAATACTTCCACTGTCCCTTaGATGACAGGTGGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: SWEQLLLPTQRSYRELGNTSTVP*MTGGPV
Trigger: GACCGGGCCACCTGTCATTCAAGGGACAGTGGAAGT...ATTCCCTAATTCTCTGTAAGAGCGCTGTGTGGGCAGGAGAAGCTGTTCCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp AAGGATATTCTGTCGTCAAGAGCATGCAGAAAGCCATGGGCTTGGATCCCTGCGACTTCCACTGTCCCTTaGATGACAGGTGGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: KDILSSRACRKPWAWIPATSTVP*MTGGPV
Trigger: GACCGGGCCACCTGTCATTCAAGGGACAGTGGAAGT...CGCAGGGATCCAAGCCCATGGCTTTCTGCATGCTCTTGACGACAGAATATCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141203.8
ENSMUST00000147737.8
CDS-3UTR TCA 90 bp CTCTTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAGTAGCCACTGCTCACTaGGCTGCTGTCCACATGGCA +
Preference number: 4 (lower is better)
Translates to: LLQRIREWHPGDGLKSAAVATAH*AAVHMA
Trigger: TGCCATGTGGACAGCAGCTCAGTGAGCAGTGGCTAC...TGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp CTATCCTTTGGTCTCTACACTGAGGAAAGCAGGCCTGAGCCAGGGTGTGGCCCGGTTTCAGGCAAAGAGTaGTACATGTCCTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LSFGLYTEESRPEPGCGPVSGKE*YMSFSS
Trigger: GGAGGAGAAGGACATGTATCACTCTTTGCCTGAAAC...CGGGCCACACCCTGGCTCAGGCCTGCTTTCCTCAGTGTAGAGACCAAAGGATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR TCA 90 bp TCCTGGAGCCATCCCTCAAAGCTCCCGCAGAGTGGCTTTGTGAGAAGAGAGGGGTTCCAGGGAAGCCAATaGAATGCATTCTGGGACACT +
Preference number: 4 (lower is better)
Translates to: SWSHPSKLPQSGFVRREGFQGSQ*NAFWDT
Trigger: AGTGTCCCAGAATGCATTTCATTGGCTTCCCTGGAA...CCCCTCTCTTCTCACAAAGCCACTCTGCGGGAGCTTTGAGGGATGGCTCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR TCA 90 bp GCTCTGAGCGCAGACCAATGGCTCTTACCGTGGAAGTGCTTTTCTCTTTGGCAACTGCTCCAGGCTGACTaGCTTACTCTTCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: ALSADQWLLPWKCFSLWQLLQAD*LTLLPG
Trigger: GCCTGGGAGAAGAGTAAGTCAGTCAGCCTGGAGCAG...TTGCCAAAGAGAAAAGCACTTCCACGGTAAGAGCCATTGGTCTGCGCTCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp ATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAGGGCCCTGGGGAAGCCCAGTTCACGGTTaGTCTTTTCCAAACGATCTT +
Preference number: 4 (lower is better)
Translates to: IREWHPGDGLKSAAGPWGSPVHG*SFPNDL
Trigger: AAGATCGTTTGGAAAAGATCAACCGTGAACTGGGCT...TCCCCAGGGCCCTGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp AGCTGGGAACAGCTTCTCCTGCCCACACAGCGCTCTTACAGAGAATTAGGGAATGCTGCTCAACCACACTaGAGAGCTGCAACCACCTGG +
Preference number: 4 (lower is better)
Translates to: SWEQLLLPTQRSYRELGNAAQPH*RAATTW
Trigger: CCAGGTGGTTGCAGCTCTTCAGTGTGGTTGAGCAGC...ATTCCCTAATTCTCTGTAAGAGCGCTGTGTGGGCAGGAGAAGCTGTTCCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp ACAGACAGGATACTTGCTGCTCCTAGCTGGGAACAGCTTCTCCTGCCCACACAGGCCCATTTGGGTTTCTaGAGACACCTGCTCACTCAC +
Preference number: 4 (lower is better)
Translates to: TDRILAAPSWEQLLLPTQAHLGF*RHLLTH
Trigger: GTGAGTGAGCAGGTGTCTGCAGAAACCCAAATGGGC...CTGTGTGGGCAGGAGAAGCTGTTCCCAGCTAGGAGCAGCAAGTATCCTGTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp AGCGGCAAGCACTTTTACCTGCTGAACCTTCTTGCTGGCCCAATTATTCTACTAACCACAGAGGCTGGGTaGTGCCCCTGGGAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SGKHFYLLNLLAGPIILLTTEAG*CPWEAA
Trigger: GGCAGCTTCCCAGGGGCAGCACCCAGCCTCTGTGGT...TAGTAGAATAATTGGGCCAGCAAGAAGGTTCAGCAGGTAAAAGTGCTTGCCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp AGCTCAGACGACTCTGTCTGCAGACTCAGAGCACAAATATGTGGGTGCTGGGTTCAGGGGCCTCTCTGCTaGGGATGGTGCAAACGTCTT +
Preference number: 4 (lower is better)
Translates to: SSDDSVCRLRAQICGCWVQGPLC*GWCKRL
Trigger: AAGACGTTTGCACCATCCCCAGCAGAGAGGCCCCTG...AACCCAGCACCCACATATTTGTGCTCTGAGTCTGCAGACAGAGTCGTCTGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp GACTGCTCTTCCAGAGGGCCTAGGTTCAATTCCCAGCACTCACATGTCAGCTCAGTGACGAGACAGGCTTaGTTCCAGAACGGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: DCSSRGPRFNSQHSHVSSVTRQA*FQNGVW
Trigger: CCAGACTCCGTTCTGGAACCAAGCCTGTCTCGTCAC...TGAGCTGACATGTGAGTGCTGGGAATTGAACCTAGGCCCTCTGGAAGAGCAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR CCA 90 bp TCCTATCCTTTGGTCTCTACACTGAGGAAAGCAGGCCTGAGCCAGGGTGTGGCCCCCAGGCTTGTCTCGTaGACACTTTCTTCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: SYPLVSTLRKAGLSQGVAPRLVS*TLSSVH
Trigger: ATGGACTGAAGAAAGTGTCCACGAGACAAGCCTGGG...GGCCACACCCTGGCTCAGGCCTGCTTTCCTCAGTGTAGAGACCAAAGGATAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR CCA 90 bp AGCTCAGACGACTCTGTCTGCAGACTCAGAGCACAAATATGTGGGTGCTGGGTTTGGAACTGCTCCTGCTaGGCGACAATCTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SSDDSVCRLRAQICGCWVWNCSC*ATICSW
Trigger: CCAGGAGCAGATTGTCGCCCAGCAGGAGCAGTTCCA...AACCCAGCACCCACATATTTGTGCTCTGAGTCTGCAGACAGAGTCGTCTGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp ACAGCGCTCTTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGTAGCCACTGCTCACTaGGCTGCTGTCCACATGGCA +
Preference number: 4 (lower is better)
Translates to: TALLQRIREWHPGDGLKSVATAH*AAVHMA
Trigger: TGCCATGTGGACAGCAGCTCAGTGAGCAGTGGCTAC...AGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAAGAGCGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp CTCTTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAAGTGATGGTGTAGCGTaGAGGGATGGTGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LLQRIREWHPGDGLKSAASDGVA*RDGGAG
Trigger: ACCAGCTCCACCATCCCTTCACGCTACACCATCACT...TGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp GTCGCAACACAGACAGGATACTTGCTGCTCCTAGCTGGGAACAGCTTCTCCTGCTCTGCCTGCTTCACCTaGGCCTCAAGCTTTGAGATT +
Preference number: 4 (lower is better)
Translates to: VATQTGYLLLLAGNSFSCSACFT*ASSFEI
Trigger: AATCTCAAAGCTTGAGGCTCAGGTGAAGCAGGCAGA...GCAGGAGAAGCTGTTCCCAGCTAGGAGCAGCAAGTATCCTGTCTGTGTTGCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp AACTCTGTAGTCACAGTGAAGGCAAGGCAGGCAATGATCAGCAGATGCGTGGTTCCAGGATGCAGAAGGTaGCGTAGCCACTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: NSVVTVKARQAMISRCVVPGCRR*RSHCSL
Trigger: CAGTGAGCAGTGGCTACGGCACCTTCTGCATCCTGG...AACCACGCATCTGCTGATCATTGCCTGCCTTGCCTTCACTGTGACTACAGAGTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR GCA 90 bp GCTCTTACCGTGGAAGTGCTTTTCTCTTTGGCAAGGGTGGGGGTGGGTGGGTCAGGGAAGCCAATGAAATaGATTCTGGGACACTGTTGG +
Preference number: 4 (lower is better)
Translates to: ALTVEVLFSLARVGVGGSGKPMK*ILGHCW
Trigger: CCAACAGTGTCCCAGAATGCATTTCATTGGCTTCCC...TGACCCACCCACCCCCACCCTTGCCAAAGAGAAAAGCACTTCCACGGTAAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp GACTTGCTTGTGAAGACGAGTCAGTGTCAGAGTGACGAGACAGGCTTGGTTCCACTATGGAACTGCTCCTaGTGGGCGACAATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: DLLVKTSQCQSDETGLVPLWNCS*WATICS
Trigger: GGAGCAGATTGTCGCCCAGCAGGAGCAGTTCCATAG...TGGAACCAAGCCTGTCTCGTCACTCTGACACTGACTCGTCTTCACAAGCAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130502.8
CDS-3UTR GCA 90 bp GCTCTGAGCGCAGACCAATGGCTCTTACCGTGGAAGTGCTTTTCTCTTTGGCAACTATGGAACTGCTCCTaGTGGGCGACAATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ALSADQWLLPWKCFSLWQLWNCS*WATICS
Trigger: GGAGCAGATTGTCGCCCAGCAGGAGCAGTTCCATAG...TTGCCAAAGAGAAAAGCACTTCCACGGTAAGAGCCATTGGTCTGCGCTCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp GCTTTATGCTTAATGGAAACTGGAGCCACCCTGGGAACAGCCCAAGATGGGTCAACCACACTGAAGAGCTaGAACCACCTGGCCTCGCAA +
Preference number: 4 (lower is better)
Translates to: ALCLMETGATLGTAQDGSTTLKS*NHLASQ
Trigger: TTGCGAGGCCAGGTGGTTGCAGCTCTTCAGTGTGGT...TGACCCATCTTGGGCTGTTCCCAGGGTGGCTCCAGTTTCCATTAAGCATAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp GTCGCAACACAGACAGGATACTTGCTGCTCCTAGCTGGGAACAGCTTCTCCTGCGTCAAATGTGTCAGCTaGAGGCTTCCAGTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: VATQTGYLLLLAGNSFSCVKCVS*RLPVQL
Trigger: GAGCTGAACTGGAAGCCTCCAGCTGACACATTTGAC...GCAGGAGAAGCTGTTCCCAGCTAGGAGCAGCAAGTATCCTGTCTGTGTTGCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp ACAGCGCTCTTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTTCAAGAGTCAGGACCTaGCTCAGGGGCCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: TALLQRIREWHPGDGLKSSRVRT*LRGLSA
Trigger: AGCAGAGAGGCCCCTGAGCCAGGTCCTGACTCTTGA...AGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAAGAGCGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp CTCTTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAAGAAAGCCATGGGCTTaGATCCCTGCGACATGCTCC +
Preference number: 4 (lower is better)
Translates to: LLQRIREWHPGDGLKSAARKPWA*IPATCS
Trigger: GGAGCATGTCGCAGGGATCCAAGCCCATGGCTTTCT...TGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp GCTTTATGCTTAATGGAAACTGGAGCCACCCTGGGAACAGCCCAAGATGGGTCAGCATGCAGAAAGCCATaGGCTTGGATCCCTGCGACA +
Preference number: 4 (lower is better)
Translates to: ALCLMETGATLGTAQDGSACRKP*AWIPAT
Trigger: TGTCGCAGGGATCCAAGCCCATGGCTTTCTGCATGC...TGACCCATCTTGGGCTGTTCCCAGGGTGGCTCCAGTTTCCATTAAGCATAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp GCTTTATGCTTAATGGAAACTGGAGCCACCCTGGGAACAGCCCAAGATGGGTCAGTGACGAGACAGGCTTaGTTCCAGAACGGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: ALCLMETGATLGTAQDGSVTRQA*FQNGVW
Trigger: CCAGACTCCGTTCTGGAACCAAGCCTGTCTCGTCAC...TGACCCATCTTGGGCTGTTCCCAGGGTGGCTCCAGTTTCCATTAAGCATAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp TTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAGGGATTCTGGGACACTGTTaGCTGTACCTGGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LQRIREWHPGDGLKSAAGILGHC*LYLEAG
Trigger: CCCAGCTTCCAGGTACAGCCAACAGTGTCCCAGAAT...CCCTGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp CTCTTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAGGAGTACTCCGCTCCTaGAATCAGCCACTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LLQRIREWHPGDGLKSAAGVLRS*NQPLPP
Trigger: AGGAGGAAGTGGCTGATTCCAGGAGCGGAGTACTCC...TGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp GTCGCAACACAGACAGGATACTTGCTGCTCCTAGCTGGGAACAGCTTCTCCTGCCCCAGGCTTGTCTCGTaGACACTTTCTTCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: VATQTGYLLLLAGNSFSCPRLVS*TLSSVH
Trigger: ATGGACTGAAGAAAGTGTCCACGAGACAAGCCTGGG...GCAGGAGAAGCTGTTCCCAGCTAGGAGCAGCAAGTATCCTGTCTGTGTTGCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
3UTR CAA 72 bp ACTGGCCGATCTGCACTGAAAGGATTCTCCTATCCTTaGGTCTCTACACTGAGGAAAGCAGGCCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: TGRSALKGFSYP*VSTLRKAGLSQ
Trigger: CTGGCTCAGGCCTGCTTTCCTCAGTGTAGAGACCAAAGGATAGGAGAATCCTTTCAGTGCAGATCGGCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR CAA 72 bp TATTCTGTCGTCAAGAGCATGCAGAAAGCCATGGGCTaGGATCCCTGCGACATGCTCCTTTGGCTTCATGCG +
Preference number: 4 (lower is better)
Translates to: YSVVKSMQKAMG*DPCDMLLWLHA
Trigger: CGCATGAAGCCAAAGGAGCATGTCGCAGGGATCCAAGCCCATGGCTTTCTGCATGCTCTTGACGACAGAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
CDS-3UTR TCA 90 bp TACTTTCCCTTTGGAATGCATGGTTTTTCCAAGTGTCCACAGGTGATGCTCTCGCCACTGTCCCTTGAATaGCAGGTGGCCCGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: YFPFGMHGFSKCPQVMLSPLSLE*QVARSS
Trigger: GGAAGACCGGGCCACCTGTCATTCAAGGGACAGTGG...CGAGAGCATCACCTGTGGACACTTGGAAAAACCATGCATTCCAAAGGGAAAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000141203.8
ENSMUST00000147737.8
CDS-3UTR TCA 90 bp GCTTGGATCCCTGCGACATGCTCCTTTGGCTTCATGCGTATGGCTCCTGGATCACTTGTCTTAAAGCAGTaGGGACTTCCACTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: AWIPATCSFGFMRMAPGSLVLKQ*GLPLSL
Trigger: AAGGGACAGTGGAAGTCCTCACTGCTTTAAGACAAG...TGATCCAGGAGCCATACGCATGAAGCCAAAGGAGCATGTCGCAGGGATCCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141203.8
ENSMUST00000147737.8
CDS-3UTR TCA 90 bp ACAGACAGGATACTTGCTGCTCCTAGCTGGGAACAGCTTCTCCTGCCCACACAGCTTGTCTTAAAGCAGTaGGGACTTCCACTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: TDRILAAPSWEQLLLPTQLVLKQ*GLPLSL
Trigger: AAGGGACAGTGGAAGTCCTCACTGCTTTAAGACAAG...CTGTGTGGGCAGGAGAAGCTGTTCCCAGCTAGGAGCAGCAAGTATCCTGTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp GACTGCTCTTCCAGAGGGCCTAGGTTCAATTCCCAGCACTCACATGTCAGCTCACTTCAGGGGTCTGTGTaGAGAAGTTTATGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: DCSSRGPRFNSQHSHVSSLQGSV*RSLWLL
Trigger: CAGCAGCCATAAACTTCTTCACACAGACCCCTGAAG...TGAGCTGACATGTGAGTGCTGGGAATTGAACCTAGGCCCTCTGGAAGAGCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR TCA 90 bp AGCTGGGAACAGCTTCTCCTGCCCACACAGCGCTCTTACAGAGAATTAGGGAATCACTGCTGGCTGCATTaGAGCGTTCTCTCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: SWEQLLLPTQRSYRELGNHCWLH*SVLSSH
Trigger: GTGACTTGAGAGAACGCTTCAATGCAGCCAGCAGTG...ATTCCCTAATTCTCTGTAAGAGCGCTGTGTGGGCAGGAGAAGCTGTTCCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp CTATCCTTTGGTCTCTACACTGAGGAAAGCAGGCCTGAGCCAGGGTGTGGCCCGAAACATGAAACTTCTTaGGGGTCATTCGAACTGAGC +
Preference number: 4 (lower is better)
Translates to: LSFGLYTEESRPEPGCGPKHETS*GSFELS
Trigger: GCTCAGTTCGAATGACCCTCAAGAAGTTTCATGTTT...CGGGCCACACCCTGGCTCAGGCCTGCTTTCCTCAGTGTAGAGACCAAAGGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR GCA 90 bp GCTTTATGCTTAATGGAAACTGGAGCCACCCTGGGAACAGCCCAAGATGGGTCAGTTTCTGCAGACACCTaGTCACTCACAGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ALCLMETGATLGTAQDGSVSADT*SLTELL
Trigger: CAGCAGCTCTGTGAGTGAGCAGGTGTCTGCAGAAAC...TGACCCATCTTGGGCTGTTCCCAGGGTGGCTCCAGTTTCCATTAAGCATAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp GCTCTGAGCGCAGACCAATGGCTCTTACCGTGGAAGTGCTTTTCTCTTTGGCAATGGATCCCTGCGACATaGTCCTTTGGCTTCATGCGT +
Preference number: 4 (lower is better)
Translates to: ALSADQWLLPWKCFSLWQWIPAT*SFGFMR
Trigger: ACGCATGAAGCCAAAGGAGCATGTCGCAGGGATCCA...TTGCCAAAGAGAAAAGCACTTCCACGGTAAGAGCCATTGGTCTGCGCTCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp GAGCTCAGAAGACAACTTGAGGGAGTCGTTTCTCTCTTTCTAACGCGTGGGTCCTGGATCCCTGCGACATaGTCCTTTGGCTTCATGCGT +
Preference number: 4 (lower is better)
Translates to: ELRRQLEGVVSLFLTRGSWIPAT*SFGFMR
Trigger: ACGCATGAAGCCAAAGGAGCATGTCGCAGGGATCCA...GGACCCACGCGTTAGAAAGAGAGAAACGACTCCCTCAAGTTGTCTTCTGAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp AGCTCAGACGACTCTGTCTGCAGACTCAGAGCACAAATATGTGGGTGCTGGGTTCTGTCGTCAAGAGCATaGAGAAAGCCATGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SSDDSVCRLRAQICGCWVLSSRA*RKPWAW
Trigger: CCAAGCCCATGGCTTTCTGCATGCTCTTGACGACAG...AACCCAGCACCCACATATTTGTGCTCTGAGTCTGCAGACAGAGTCGTCTGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp AGCTCAGACGACTCTGTCTGCAGACTCAGAGCACAAATATGTGGGTGCTGGGTTTGTCTCTTCGGTCTCTaGTGGGCACATTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SSDDSVCRLRAQICGCWVCLFGL*WAHFSG
Trigger: CCCAGAGAAATGTGCCCAGCAGAGACCGAAGAGACA...AACCCAGCACCCACATATTTGTGCTCTGAGTCTGCAGACAGAGTCGTCTGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp CTCTTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCATGTATTCGCCGGATCTaGCTATGGAACTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LLQRIREWHPGDGLKSAACIRRI*LWNCSC
Trigger: GCAGGAGCAGTTCCATAGGCAGATCCGGCGAATACA...TGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp ATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAGGGCCCTGGGGACCATTTGTACTAAGGTaGGGACTACTTCTATTAGCA +
Preference number: 4 (lower is better)
Translates to: IREWHPGDGLKSAAGPWGPFVLR*GLLLLA
Trigger: TGCTAATAGAAGTAGTCCCCACCTTAGTACAAATGG...TCCCCAGGGCCCTGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp GCTCTGAGCGCAGACCAATGGCTCTTACCGTGGAAGTGCTTTTCTCTTTGGCAACCTCTCTGCTGGGGATaGTGCAAACGTCTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: ALSADQWLLPWKCFSLWQPLCWG*CKRLLQ
Trigger: TTGGAGAAGACGTTTGCACCATCCCCAGCAGAGAGG...TTGCCAAAGAGAAAAGCACTTCCACGGTAAGAGCCATTGGTCTGCGCTCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp CGGGCAGAAAACCCAGCTATCCACCTGCCACTTCCAGCTCTAATCATTTTCTTTTCAAGAGTCAGGACCTaGCTCAGGGGCCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RAENPAIHLPLPALIIFFSRVRT*LRGLSA
Trigger: AGCAGAGAGGCCCCTGAGCCAGGTCCTGACTCTTGA...AAAGAAAATGATTAGAGCTGGAAGTGGCAGGTGGATAGCTGGGTTTTCTGCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp GCTCTGAGCGCAGACCAATGGCTCTTACCGTGGAAGTGCTTTTCTCTTTGGCAAACTGTTGGCTGTACCTaGAAGCTGGGACTGACTGAC +
Preference number: 4 (lower is better)
Translates to: ALSADQWLLPWKCFSLWQTVGCT*KLGLTD
Trigger: GTCAGTCAGTCCCAGCTTCCAGGTACAGCCAACAGT...TTGCCAAAGAGAAAAGCACTTCCACGGTAAGAGCCATTGGTCTGCGCTCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp CTCTTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAATTCTGGGACACTGTTaGCTGTACCTGGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LLQRIREWHPGDGLKSAAILGHC*LYLEAG
Trigger: CCCAGCTTCCAGGTACAGCCAACAGTGTCCCAGAAT...TGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp TTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAGGGCTTGTCTTAAAGCAGTaGGGACTTCCACTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: LQRIREWHPGDGLKSAAGLVLKQ*GLPLSL
Trigger: AAGGGACAGTGGAAGTCCTCACTGCTTTAAGACAAG...CCCTGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp AGCTGGGAACAGCTTCTCCTGCCCACACAGCGCTCTTACAGAGAATTAGGGAATTGGACGCTGGGGAACTaGCAACAGACTCATTTCTCT +
Preference number: 4 (lower is better)
Translates to: SWEQLLLPTQRSYRELGNWTLGN*QQTHFS
Trigger: AGAGAAATGAGTCTGTTGTCAGTTCCCCAGCGTCCA...ATTCCCTAATTCTCTGTAAGAGCGCTGTGTGGGCAGGAGAAGCTGTTCCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp TTTAAGACTGCTACCCTGCCCACTTTTAGGCTGAGCTGCTTTTTAGCTGAGTGTTGGGTAGGATGTGGATaGTGCTGGCTGTGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: FKTATLPTFRLSCFLAECWVGCG*CWLCLG
Trigger: CCCGAGACACAGCCAGCATCATCCACATCCTACCCA...ACACTCAGCTAAAAAGCAGCTCAGCCTAAAAGTGGGCAGGGTAGCAGTCTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR TCA 90 bp AGCTGGGAACAGCTTCTCCTGCCCACACAGCGCTCTTACAGAGAATTAGGGAATCTTCAGGGGTCTGTGTaGAGAAGTTTATGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SWEQLLLPTQRSYRELGNLQGSV*RSLWLL
Trigger: CAGCAGCCATAAACTTCTTCACACAGACCCCTGAAG...ATTCCCTAATTCTCTGTAAGAGCGCTGTGTGGGCAGGAGAAGCTGTTCCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp GAGGGCCTAGGTTCAATTCCCAGCACTCACATGTCAGCTCACACCACCAATGCAAGTCAGCCCTGTTCCTaGATCAGACAACCAAGAACT +
Preference number: 4 (lower is better)
Translates to: EGLGSIPSTHMSAHTTNASQPCS*IRQPRT
Trigger: AGTTCTTGGTTGTCTGATTCAGGAACAGGGCTGACT...TGCATTGGTGGTGTGAGCTGACATGTGAGTGCTGGGAATTGAACCTAGGCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR TCA 90 bp AGCGGCAAGCACTTTTACCTGCTGAACCTTCTTGCTGGCCCAATTATTCTACTACTGCTCCAGGCTGACTaGCTTACTCTTCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SGKHFYLLNLLAGPIILLLLQAD*LTLLPG
Trigger: GCCTGGGAGAAGAGTAAGTCAGTCAGCCTGGAGCAG...TAGTAGAATAATTGGGCCAGCAAGAAGGTTCAGCAGGTAAAAGTGCTTGCCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp GCTCTTACCGTGGAAGTGCTTTTCTCTTTGGCAAGGGTGGGGGTGGGTGGGTCAGTCTTGTTTGTAAAGTaGTTCTTCCTCCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: ALTVEVLFSLARVGVGGSVLFVK*FFLQEK
Trigger: CTTCTCCTGGAGGAAGAATCACTTTACAAACAAGAC...TGACCCACCCACCCCCACCCTTGCCAAAGAGAAAAGCACTTCCACGGTAAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp ACAGCGCTCTTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGTTTCTGCAGACACCTaGTCACTCACAGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TALLQRIREWHPGDGLKSVSADT*SLTELL
Trigger: CAGCAGCTCTGTGAGTGAGCAGGTGTCTGCAGAAAC...AGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAAGAGCGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp AGCGGCAAGCACTTTTACCTGCTGAACCTTCTTGCTGGCCCAATTATTCTACTAGAAGAAGTTTATGGCTaGTGCACCCCCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SGKHFYLLNLLAGPIILLEEVYG*CTPCRA
Trigger: GGCCCTGCAGGGGGTGCAGCAGCCATAAACTTCTTC...TAGTAGAATAATTGGGCCAGCAAGAAGGTTCAGCAGGTAAAAGTGCTTGCCGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp GCTTTATGCTTAATGGAAACTGGAGCCACCCTGGGAACAGCCCAAGATGGGTCACTGCTTCAGCCTCTGTaGCCAGGATGTTACAGACTT +
Preference number: 4 (lower is better)
Translates to: ALCLMETGATLGTAQDGSLLQPL*PGCYRL
Trigger: AAGTCTGTAACATCCTGGGCACAGAGGCTGAAGCAG...TGACCCATCTTGGGCTGTTCCCAGGGTGGCTCCAGTTTCCATTAAGCATAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp ACAGCGCTCTTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGGAGGCACTGCTGGCTaGATTGAAGCGTTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: TALLQRIREWHPGDGLKSGGTAG*IEAFSQ
Trigger: TTGAGAGAACGCTTCAATGCAGCCAGCAGTGCCTCC...AGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAAGAGCGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp CGGGCAGAAAACCCAGCTATCCACCTGCCACTTCCAGCTCTAATCATTTTCTTTCATACTCTCGTGCTCTaGCTGCTTCACCTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: RAENPAIHLPLPALIIFFHTLVL*LLHLSL
Trigger: GAGGCTCAGGTGAAGCAGGCAGAGCACGAGAGTATG...AAAGAAAATGATTAGAGCTGGAAGTGGCAGGTGGATAGCTGGGTTTTCTGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp ACAGCGCTCTTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTAGGGCTTCCTCCAGCTaGTTATCTAGCTTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: TALLQRIREWHPGDGLKSRASSS*LSSFLS
Trigger: GGACAGGAAGCTAGATAAGCAGCTGGAGGAAGCCCT...AGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAAGAGCGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp ACAGCGCTCTTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTTGTCTCTTCGGTCTCTaGTGGGCACATTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: TALLQRIREWHPGDGLKSCLFGL*WAHFSG
Trigger: CCCAGAGAAATGTGCCCAGCAGAGACCGAAGAGACA...AGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAAGAGCGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp AGCTGGGAACAGCTTCTCCTGCCCACACAGCGCTCTTACAGAGAATTAGGGAATTGTGCCTGCTTTGACTaGTTCTGCTTCAGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: SWEQLLLPTQRSYRELGNCACFD*FCFSLC
Trigger: ACAGAGGCTGAAGCAGAACCAGTCAAAGCAGGCACA...ATTCCCTAATTCTCTGTAAGAGCGCTGTGTGGGCAGGAGAAGCTGTTCCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp GCTCTGAGCGCAGACCAATGGCTCTTACCGTGGAAGTGCTTTTCTCTTTGGCAAGTCAAATGTGTCAGCTaGAGGCTTCCAGTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: ALSADQWLLPWKCFSLWQVKCVS*RLPVQL
Trigger: GAGCTGAACTGGAAGCCTCCAGCTGACACATTTGAC...TTGCCAAAGAGAAAAGCACTTCCACGGTAAGAGCCATTGGTCTGCGCTCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp GCTCTTACCGTGGAAGTGCTTTTCTCTTTGGCAAGGGTGGGGGTGGGTGGGTCATCCCTTTGGAATGCATaGTTTTTCCAAGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: ALTVEVLFSLARVGVGGSSLWNA*FFQVST
Trigger: TGTGGACACTTGGAAAAACCATGCATTCCAAAGGGA...TGACCCACCCACCCCCACCCTTGCCAAAGAGAAAAGCACTTCCACGGTAAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp GTCGCAACACAGACAGGATACTTGCTGCTCCTAGCTGGGAACAGCTTCTCCTGCCGGCAGAAATGTCTTTaGCCTCCAGTTTCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: VATQTGYLLLLAGNSFSCRQKCL*PPVSVS
Trigger: TGAAACAGAAACTGGAGGCCAAAGACATTTCTGCCG...GCAGGAGAAGCTGTTCCCAGCTAGGAGCAGCAAGTATCCTGTCTGTGTTGCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp GAGCTCAGAAGACAACTTGAGGGAGTCGTTTCTCTCTTTCTAACGCGTGGGTCCGTTCCTGCAAAACTTTaGAGGCACTGCTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: ELRRQLEGVVSLFLTRGSVPAKL*RHCWLH
Trigger: ATGCAGCCAGCAGTGCCTCCAAAGTTTTGCAGGAAC...GGACCCACGCGTTAGAAAGAGAGAAACGACTCCCTCAAGTTGTCTTCTGAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp GCTCTTACCGTGGAAGTGCTTTTCTCTTTGGCAAGGGTGGGGGTGGGTGGGTCATGGTTTGTTGTAACGTaGACACAGGAACGGTATCTA +
Preference number: 4 (lower is better)
Translates to: ALTVEVLFSLARVGVGGSWFVVT*TQERYL
Trigger: TAGATACCGTTCCTGTGTCCACGTTACAACAAACCA...TGACCCACCCACCCCCACCCTTGCCAAAGAGAAAAGCACTTCCACGGTAAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
3UTR CAA 72 bp GTGAAGACGAGTCAGTGTCAGAGTGACGAGACAGGCTaGGTTCCAGAACGGAGTCTGGGGAAAAGGATATTC +
Preference number: 4 (lower is better)
Translates to: VKTSQCQSDETG*VPERSLGKRIF
Trigger: GAATATCCTTTTCCCCAGACTCCGTTCTGGAACCAAGCCTGTCTCGTCACTCTGACACTGACTCGTCTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR CAA 72 bp GGTTTTTCCAAGTGTCCACAGGTGATGCTCTCGTGGTaGAAGGATACTTGGAGAACCCAGACACCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: GFSKCPQVMLSW*KDTWRTQTPGK
Trigger: CTTCCCAGGTGTCTGGGTTCTCCAAGTATCCTTCAACCACGAGAGCATCACCTGTGGACACTTGGAAAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR CAA 72 bp ACTGGCGTTAGCATAATCTCTCTTTTTGTTGGAGTGTaGGCTTTCCGACTGGACGGTGGGAGAGACGACGAC +
Preference number: 4 (lower is better)
Translates to: TGVSIISLFVGV*AFRLDGGRDDD
Trigger: GTCGTCGTCTCTCCCACCGTCCAGTCGGAAAGCCAACACTCCAACAAAAAGAGAGATTATGCTAACGCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
CDS-3UTR TCA 90 bp AGCTGGGAACAGCTTCTCCTGCCCACACAGCGCTCTTACAGAGAATTAGGGAATACCTGGGAAGGATTATaGCTTGCTTGTGAAGACGAG +
Preference number: 4 (lower is better)
Translates to: SWEQLLLPTQRSYRELGNTWEGL*LACEDE
Trigger: CTCGTCTTCACAAGCAAGTCATAATCCTTCCCAGGT...ATTCCCTAATTCTCTGTAAGAGCGCTGTGTGGGCAGGAGAAGCTGTTCCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp GCTCTGAGCGCAGACCAATGGCTCTTACCGTGGAAGTGCTTTTCTCTTTGGCAACTTCAGTCCATTTGGTaGGTGTTCAGGACAAGAGCT +
Preference number: 4 (lower is better)
Translates to: ALSADQWLLPWKCFSLWQLQSIW*VFRTRA
Trigger: AGCTCTTGTCCTGAACACTCACCAAATGGACTGAAG...TTGCCAAAGAGAAAAGCACTTCCACGGTAAGAGCCATTGGTCTGCGCTCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp TACATCTATTACACACTTCAAAAACCAAAGCTTACGCTTTCTAAGGAGCGCAGAGCAGGGCCATGTGCCTaGACCACAGAGGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: YIYYTLQKPKLTLSKERRAGPCA*TTEAGC
Trigger: GCACCCAGCCTCTGTGGTGCAGGCACATGGCCCTGC...TCTGCGCTCCTTAGAAAGCGTAAGCTTTGGTTTTTGAAGTGTGTAATAGATGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR GCA 90 bp AGCGGCAAGCACTTTTACCTGCTGAACCTTCTTGCTGGCCCAATTATTCTACTACTGGGGTCCAGAGGCTaGCCAGTAAAGATGGAGTAC +
Preference number: 4 (lower is better)
Translates to: SGKHFYLLNLLAGPIILLLGSRG*PVKMEY
Trigger: GTACTCCATCTTTACTGGGCAGCCTCTGGACCCCAG...TAGTAGAATAATTGGGCCAGCAAGAAGGTTCAGCAGGTAAAAGTGCTTGCCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp CGGGCAGAAAACCCAGCTATCCACCTGCCACTTCCAGCTCTAATCATTTTCTTTAGGGCTTCCTCCAGCTaGTTATCTAGCTTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: RAENPAIHLPLPALIIFFRASSS*LSSFLS
Trigger: GGACAGGAAGCTAGATAAGCAGCTGGAGGAAGCCCT...AAAGAAAATGATTAGAGCTGGAAGTGGCAGGTGGATAGCTGGGTTTTCTGCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp CTCTTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAGAAAAGAAGCCCATTTaGGTTTCTGCAGACACCTGC +
Preference number: 4 (lower is better)
Translates to: LLQRIREWHPGDGLKSAAEKKPI*VSADTC
Trigger: GCAGGTGTCTGCAGAAACCCAAATGGGCTTCTTTTC...TGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp AACTCTGTAGTCACAGTGAAGGCAAGGCAGGCAATGATCAGCAGATGCGTGGTTAGTCTGGGTAGGATGTaGATGATGCTGGCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: NSVVTVKARQAMISRCVVSLGRM*MMLAVS
Trigger: AGACACAGCCAGCATCATCCACATCCTACCCAGACT...AACCACGCATCTGCTGATCATTGCCTGCCTTGCCTTCACTGTGACTACAGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR CCA 90 bp GCTCTGAGCGCAGACCAATGGCTCTTACCGTGGAAGTGCTTTTCTCTTTGGCAAATTCCCCAGGAAAAGTaGAGCCGTCTTCCTTTAGAG +
Preference number: 4 (lower is better)
Translates to: ALSADQWLLPWKCFSLWQIPQEK*SRLPLE
Trigger: CTCTAAAGGAAGACGGCTCCACTTTTCCTGGGGAAT...TTGCCAAAGAGAAAAGCACTTCCACGGTAAGAGCCATTGGTCTGCGCTCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp CGGGCAGAAAACCCAGCTATCCACCTGCCACTTCCAGCTCTAATCATTTTCTTTTGCGACATGCTCCTTTaGCTTCATGCGTATGGCTCC +
Preference number: 4 (lower is better)
Translates to: RAENPAIHLPLPALIIFFCDMLL*LHAYGS
Trigger: GGAGCCATACGCATGAAGCCAAAGGAGCATGTCGCA...AAAGAAAATGATTAGAGCTGGAAGTGGCAGGTGGATAGCTGGGTTTTCTGCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp ACAGACAGGATACTTGCTGCTCCTAGCTGGGAACAGCTTCTCCTGCCCACACAGTGGTTTGTTGTAACGTaGACACAGGAACGGTATCTA +
Preference number: 4 (lower is better)
Translates to: TDRILAAPSWEQLLLPTQWFVVT*TQERYL
Trigger: TAGATACCGTTCCTGTGTCCACGTTACAACAAACCA...CTGTGTGGGCAGGAGAAGCTGTTCCCAGCTAGGAGCAGCAAGTATCCTGTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
3UTR CAA 72 bp ACTTGGAGAACCCAGACACCTGGGAAGGATTATGACTaGCTTGTGAAGACGAGTCAGTGTCAGAGTGACGAG +
Preference number: 4 (lower is better)
Translates to: TWRTQTPGKDYD*LVKTSQCQSDE
Trigger: CTCGTCACTCTGACACTGACTCGTCTTCACAAGCAAGTCATAATCCTTCCCAGGTGTCTGGGTTCTCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
3UTR CAA 72 bp CTCTGCTGGGCACATTTCTCTGGGGAACGGCCTGTATaGACTGAAGGCTCAGTTTGCCGAGAATTCACTAAT +
Preference number: 4 (lower is better)
Translates to: LCWAHFSGERPV*TEGSVCREFTN
Trigger: ATTAGTGAATTCTCGGCAAACTGAGCCTTCAGTCAATACAGGCCGTTCCCCAGAGAAATGTGCCCAGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
CDS-3UTR TCA 90 bp AGAAATGTCTTTGGCCTCCAGTTTCTGTTTCAGACTACTTATCTCCGACTCATACCACTGTCCCTTGAATaGCAGGTGGCCCGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: RNVFGLQFLFQTTYLRLIPLSLE*QVARSS
Trigger: GGAAGACCGGGCCACCTGTCATTCAAGGGACAGTGG...TATGAGTCGGAGATAAGTAGTCTGAAACAGAAACTGGAGGCCAAAGACATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
CDS-3UTR TCA 90 bp GCTCTGAGCGCAGACCAATGGCTCTTACCGTGGAAGTGCTTTTCTCTTTGGCAACGCTTCCTTATCATCTaGGAGCTTGTAAGCATTCTC +
Preference number: 4 (lower is better)
Translates to: ALSADQWLLPWKCFSLWQRFLII*ELVSIL
Trigger: GAGAATGCTTACAAGCTCTCAGATGATAAGGAAGCG...TTGCCAAAGAGAAAAGCACTTCCACGGTAAGAGCCATTGGTCTGCGCTCAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp GAGCTCAGAAGACAACTTGAGGGAGTCGTTTCTCTCTTTCTAACGCGTGGGTCCGAGCTGCGCAAAACATaGAACTTCTTGAGGGTCATT +
Preference number: 4 (lower is better)
Translates to: ELRRQLEGVVSLFLTRGSELRKT*NFLRVI
Trigger: AATGACCCTCAAGAAGTTTCATGTTTTGCGCAGCTC...GGACCCACGCGTTAGAAAGAGAGAAACGACTCCCTCAAGTTGTCTTCTGAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp AAAGTTCATTGTAAAAGGGTAACACTATTTCTTTACAAACAAGCTGCCTCCCCAGCAGGGCCATGTGCCTaGACCACAGAGGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: KVHCKRVTLFLYKQAASPAGPCA*TTEAGC
Trigger: GCACCCAGCCTCTGTGGTGCAGGCACATGGCCCTGC...TGGGGAGGCAGCTTGTTTGTAAAGAAATAGTGTTACCCTTTTACAATGAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp TTCTTGCTGGCCCAATTATTCTACTATTCAAGGCATGTGTTTCACATAGGAATTCCCTGCAGGGCCATGTaGCTGCACCACAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: FLLAQLFYYSRHVFHIGIPCRAM*LHHRGW
Trigger: CCAGCCTCTGTGGTGCAGGCACATGGCCCTGCAGGG...AATTCCTATGTGAAACACATGCCTTGAATAGTAGAATAATTGGGCCAGCAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp AGTACATCCCAGCATAGAAACAGTTTGCCTCTCTTGGGTAACAGATGCTCTTTAGAAGAAGTTTATGGCTaGTGCACCCCCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: STSQHRNSLPLLGNRCSLEEVYG*CTPCRA
Trigger: GGCCCTGCAGGGGGTGCAGCAGCCATAAACTTCTTC...TAAAGAGCATCTGTTACCCAAGAGAGGCAAACTGTTTCTATGCTGGGATGTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR GCA 90 bp CGGGCAGAAAACCCAGCTATCCACCTGCCACTTCCAGCTCTAATCATTTTCTTTCTGCTTCAGCCTCTGTaGCCAGGATGTTACAGACTT +
Preference number: 4 (lower is better)
Translates to: RAENPAIHLPLPALIIFFLLQPL*PGCYRL
Trigger: AAGTCTGTAACATCCTGGGCACAGAGGCTGAAGCAG...AAAGAAAATGATTAGAGCTGGAAGTGGCAGGTGGATAGCTGGGTTTTCTGCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp AGCGGCAAGCACTTTTACCTGCTGAACCTTCTTGCTGGCCCAATTATTCTACTATGCTTTGACTGGTTCTaGTTCAGCCTCTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: SGKHFYLLNLLAGPIILLCFDWF*FSLCAQ
Trigger: CTGGGCACAGAGGCTGAAGCAGAACCAGTCAAAGCA...TAGTAGAATAATTGGGCCAGCAAGAAGGTTCAGCAGGTAAAAGTGCTTGCCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp GCTTTATGCTTAATGGAAACTGGAGCCACCCTGGGAACAGCCCAAGATGGGTCAAGTAGCTTCATTCAATaGACTATCCAGCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: ALCLMETGATLGTAQDGSSSFIQ*TIQLAT
Trigger: TGTGGCCAGCTGGATAGTGCATTGAATGAAGCTACT...TGACCCATCTTGGGCTGTTCCCAGGGTGGCTCCAGTTTCCATTAAGCATAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp AGTACATCCCAGCATAGAAACAGTTTGCCTCTCTTGGGTAACAGATGCTCTTTACAGGGGCCTCTCTGCTaGGGATGGTGCAAACGTCTT +
Preference number: 4 (lower is better)
Translates to: STSQHRNSLPLLGNRCSLQGPLC*GWCKRL
Trigger: AAGACGTTTGCACCATCCCCAGCAGAGAGGCCCCTG...TAAAGAGCATCTGTTACCCAAGAGAGGCAAACTGTTTCTATGCTGGGATGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR CCA 90 bp CTCTTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCATCATCTAGCAGAAACTaGAGCTGCTTCTTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: LLQRIREWHPGDGLKSAASSSRN*SCFFAV
Trigger: CACTGCAAAGAAGCAGCTCCAGTTTCTGCTAGATGA...TGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
3UTR CAA 72 bp CTTCTGAGTCATCTAGCAGAAACTGGAGCTGCTTCTTaGCAGTGGTTTGTTGTAACGTGGACACAGGAACGG +
Preference number: 4 (lower is better)
Translates to: LLSHLAETGAAS*QWFVVTWTQER
Trigger: CCGTTCCTGTGTCCACGTTACAACAAACCACTGCAAAGAAGCAGCTCCAGTTTCTGCTAGATGACTCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
CDS-3UTR TCA 90 bp TACATCTATTACACACTTCAAAAACCAAAGCTTACGCTTTCTAAGGAGCGCAGACCACTGTCCCTTGAATaGCAGGTGGCCCGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: YIYYTLQKPKLTLSKERRPLSLE*QVARSS
Trigger: GGAAGACCGGGCCACCTGTCATTCAAGGGACAGTGG...TCTGCGCTCCTTAGAAAGCGTAAGCTTTGGTTTTTGAAGTGTGTAATAGATGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
CDS-3UTR TCA 90 bp AGCGGCAAGCACTTTTACCTGCTGAACCTTCTTGCTGGCCCAATTATTCTACTAACTCTTCCAAAGTTCTaGGTCAGTCCGGCCACTGTT +
Preference number: 4 (lower is better)
Translates to: SGKHFYLLNLLAGPIILLTLPKF*VSPATV
Trigger: AACAGTGGCCGGACTGACTCAGAACTTTGGAAGAGT...TAGTAGAATAATTGGGCCAGCAAGAAGGTTCAGCAGGTAAAAGTGCTTGCCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp TTTAAGACTGCTACCCTGCCCACTTTTAGGCTGAGCTGCTTTTTAGCTGAGTGTTGGACGCTGGGGAACTaGCAACAGACTCATTTCTCT +
Preference number: 4 (lower is better)
Translates to: FKTATLPTFRLSCFLAECWTLGN*QQTHFS
Trigger: AGAGAAATGAGTCTGTTGTCAGTTCCCCAGCGTCCA...ACACTCAGCTAAAAAGCAGCTCAGCCTAAAAGTGGGCAGGGTAGCAGTCTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR TCA 90 bp CGGGCAGAAAACCCAGCTATCCACCTGCCACTTCCAGCTCTAATCATTTTCTTTTTCCAGGGAAGCCAATaGAATGCATTCTGGGACACT +
Preference number: 4 (lower is better)
Translates to: RAENPAIHLPLPALIIFFFQGSQ*NAFWDT
Trigger: AGTGTCCCAGAATGCATTTCATTGGCTTCCCTGGAA...AAAGAAAATGATTAGAGCTGGAAGTGGCAGGTGGATAGCTGGGTTTTCTGCCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp CTCTTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAGTCTTGTTTGTAAAGTaGTTCTTCCTCCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LLQRIREWHPGDGLKSAAVLFVK*FFLQEK
Trigger: CTTCTCCTGGAGGAAGAATCACTTTACAAACAAGAC...TGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp GCTCTGAGCGCAGACCAATGGCTCTTACCGTGGAAGTGCTTTTCTCTTTGGCAAAAACATGAAACTTCTTaGGGGTCATTCGAACTGAGC +
Preference number: 4 (lower is better)
Translates to: ALSADQWLLPWKCFSLWQKHETS*GSFELS
Trigger: GCTCAGTTCGAATGACCCTCAAGAAGTTTCATGTTT...TTGCCAAAGAGAAAAGCACTTCCACGGTAAGAGCCATTGGTCTGCGCTCAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp AGAAGAGAGGGGCACAGCTCCACAGCTGGAGAGTTTATTTTCTATGTACATGTTCTGTCGTCAAGAGCATaGAGAAAGCCATGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: RREGHSSTAGEFIFYVHVLSSRA*RKPWAW
Trigger: CCAAGCCCATGGCTTTCTGCATGCTCTTGACGACAG...AACATGTACATAGAAAATAAACTCTCCAGCTGTGGAGCTGTGCCCCTCTCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR GCA 90 bp TTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAGGGACTTTCCCTTTGGAATaGATGGTTTTTCCAAGTGTC +
Preference number: 4 (lower is better)
Translates to: LQRIREWHPGDGLKSAAGTFPLE*MVFPSV
Trigger: GACACTTGGAAAAACCATGCATTCCAAAGGGAAAGT...CCCTGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp GTGCAAACGTCTTCTCCAAAGTTTCAGGCAAAGAGTGATACATGTCCTTCTCCTTGTATTCGCCGGATCTaGCTATGGAACTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VQTSSPKFQAKSDTCPSPCIRRI*LWNCSC
Trigger: GCAGGAGCAGTTCCATAGGCAGATCCGGCGAATACA...AGGAGAAGGACATGTATCACTCTTTGCCTGAAACTTTGGAGAAGACGTTTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130502.8
CDS-3UTR CCA 90 bp GACTGCTCTTCCAGAGGGCCTAGGTTCAATTCCCAGCACTCACATGTCAGCTCACCATTTGTACTAAGGTaGGGACTACTTCTATTAGCA +
Preference number: 4 (lower is better)
Translates to: DCSSRGPRFNSQHSHVSSPFVLR*GLLLLA
Trigger: TGCTAATAGAAGTAGTCCCCACCTTAGTACAAATGG...TGAGCTGACATGTGAGTGCTGGGAATTGAACCTAGGCCCTCTGGAAGAGCAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR CCA 90 bp TTTAAGACTGCTACCCTGCCCACTTTTAGGCTGAGCTGCTTTTTAGCTGAGTGTTGTGCCTGCTTTGACTaGTTCTGCTTCAGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: FKTATLPTFRLSCFLAECCACFD*FCFSLC
Trigger: ACAGAGGCTGAAGCAGAACCAGTCAAAGCAGGCACA...ACACTCAGCTAAAAAGCAGCTCAGCCTAAAAGTGGGCAGGGTAGCAGTCTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR CCA 90 bp AGCGGCAAGCACTTTTACCTGCTGAACCTTCTTGCTGGCCCAATTATTCTACTAGTTCCTGCAAAACTTTaGAGGCACTGCTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: SGKHFYLLNLLAGPIILLVPAKL*RHCWLH
Trigger: ATGCAGCCAGCAGTGCCTCCAAAGTTTTGCAGGAAC...TAGTAGAATAATTGGGCCAGCAAGAAGGTTCAGCAGGTAAAAGTGCTTGCCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp ACAGCGCTCTTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCTGCTTCTTTGCAGTaGTTTGTTGTAACGTGGACA +
Preference number: 4 (lower is better)
Translates to: TALLQRIREWHPGDGLKSAASLQ*FVVTWT
Trigger: TGTCCACGTTACAACAAACCACTGCAAAGAAGCAGC...AGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAAGAGCGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp CATGGAACTTTTGAAGGAAACGGTACTGTAGTCAAGCCAACATTAAACCATAGTTGGCCCGGTCTTCCCTaGGAAAGAGGACACCCCATT +
Preference number: 4 (lower is better)
Translates to: HGTFEGNGTVVKPTLNHSWPGLP*ERGHPI
Trigger: AATGGGGTGTCCTCTTTCTCAGGGAAGACCGGGCCA...ACTATGGTTTAATGTTGGCTTGACTACAGTACCGTTTCCTTCAAAAGTTCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR TCA 90 bp AGTACATCCCAGCATAGAAACAGTTTGCCTCTCTTGGGTAACAGATGCTCTTTACACTGCTGGCTGCATTaGAGCGTTCTCTCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: STSQHRNSLPLLGNRCSLHCWLH*SVLSSH
Trigger: GTGACTTGAGAGAACGCTTCAATGCAGCCAGCAGTG...TAAAGAGCATCTGTTACCCAAGAGAGGCAAACTGTTTCTATGCTGGGATGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR TCA 90 bp GACTGCTCTTCCAGAGGGCCTAGGTTCAATTCCCAGCACTCACATGTCAGCTCATCTCCTAAGAGATCCTaGAACATCTTGTTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: DCSSRGPRFNSQHSHVSSSPKRS*NILFSC
Trigger: ACAAGAAAACAAGATGTTTCAGGATCTCTTAGGAGA...TGAGCTGACATGTGAGTGCTGGGAATTGAACCTAGGCCCTCTGGAAGAGCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR TCA 90 bp ACAGCGCTCTTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTTTTTTGCTAAGGAGATaGCTAAATCCAGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: TALLQRIREWHPGDGLKSFLLRR*LNPGDR
Trigger: TCTGTCCCCTGGATTTAGTCATCTCCTTAGCAAAAA...AGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAAGAGCGCTGT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp GTTACAGACTTACCACTATTTGCTTTCCCACTGTACACTTCAGAGATCTTGTTTGCTGCTCAACCACACTaGAGAGCTGCAACCACCTGG +
Preference number: 4 (lower is better)
Translates to: VTDLPLFAFPLYTSEILFAAQPH*RAATTW
Trigger: CCAGGTGGTTGCAGCTCTTCAGTGTGGTTGAGCAGC...AAACAAGATCTCTGAAGTGTACAGTGGGAAAGCAAATAGTGGTAAGTCTGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130502.8
CDS-3UTR GCA 90 bp CATGGAACTTTTGAAGGAAACGGTACTGTAGTCAAGCCAACATTAAACCATAGTGAAGTTTATGGCTGCTaGACCCCCTGCAGGGCCATG +
Preference number: 4 (lower is better)
Translates to: HGTFEGNGTVVKPTLNHSEVYGC*TPCRAM
Trigger: CATGGCCCTGCAGGGGGTGCAGCAGCCATAAACTTC...ACTATGGTTTAATGTTGGCTTGACTACAGTACCGTTTCCTTCAAAAGTTCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR GCA 90 bp AGTACATCCCAGCATAGAAACAGTTTGCCTCTCTTGGGTAACAGATGCTCTTTATGCTTTGACTGGTTCTaGTTCAGCCTCTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: STSQHRNSLPLLGNRCSLCFDWF*FSLCAQ
Trigger: CTGGGCACAGAGGCTGAAGCAGAACCAGTCAAAGCA...TAAAGAGCATCTGTTACCCAAGAGAGGCAAACTGTTTCTATGCTGGGATGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR GCA 90 bp AGCTGGGAACAGCTTCTCCTGCCCACACAGCGCTCTTACAGAGAATTAGGGAATACTTTCCCTTTGGAATaGATGGTTTTTCCAAGTGTC +
Preference number: 4 (lower is better)
Translates to: SWEQLLLPTQRSYRELGNTFPLE*MVFPSV
Trigger: GACACTTGGAAAAACCATGCATTCCAAAGGGAAAGT...ATTCCCTAATTCTCTGTAAGAGCGCTGTGTGGGCAGGAGAAGCTGTTCCCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp AAATCATCAACCTTAAAAAGAAATCACTGGGTTGGGAACATAGCTCAGTGGCAGAGAAAGCCATGGGCTTaGATCCCTGCGACATGCTCC +
Preference number: 4 (lower is better)
Translates to: KSSTLKRNHWVGNIAQWQRKPWA*IPATCS
Trigger: GGAGCATGTCGCAGGGATCCAAGCCCATGGCTTTCT...CTGCCACTGAGCTATGTTCCCAACCCAGTGATTTCTTTTTAAGGTTGATGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR CCA 90 bp AGTACATCCCAGCATAGAAACAGTTTGCCTCTCTTGGGTAACAGATGCTCTTTAACTGTTGGCTGTACCTaGAAGCTGGGACTGACTGAC +
Preference number: 4 (lower is better)
Translates to: STSQHRNSLPLLGNRCSLTVGCT*KLGLTD
Trigger: GTCAGTCAGTCCCAGCTTCCAGGTACAGCCAACAGT...TAAAGAGCATCTGTTACCCAAGAGAGGCAAACTGTTTCTATGCTGGGATGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR CAA 72 bp TGCAGTACATCCCAGCATAGAAACAGTTTGCCTCTCTaGGGTAACAGATGCTCTTTAAGACTGCTACCCTGC +
Preference number: 4 (lower is better)
Translates to: CSTSQHRNSLPL*GNRCSLRLLPC
Trigger: GCAGGGTAGCAGTCTTAAAGAGCATCTGTTACCCAAGAGAGGCAAACTGTTTCTATGCTGGGATGTACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
3UTR CAA 72 bp CGTTCCTGCAAAACTTTGGAGGCACTGCTGGCTGCATaGAAGCGTTCTCTCAAGTCACTCACTTCTATTTCT +
Preference number: 4 (lower is better)
Translates to: RSCKTLEALLAA*KRSLKSLTSIS
Trigger: AGAAATAGAAGTGAGTGACTTGAGAGAACGCTTCAATGCAGCCAGCAGTGCCTCCAAAGTTTTGCAGGAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
3UTR CAA 72 bp CTTGTCCTCATTTCTTCAATTCGTTCCTGCAAAACTTaGGAGGCACTGCTGGCTGCATTGAAGCGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: LVLISSIRSCKT*EALLAALKRSL
Trigger: GAGAGAACGCTTCAATGCAGCCAGCAGTGCCTCCAAAGTTTTGCAGGAACGAATTGAAGAAATGAGGACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
3UTR CAA 72 bp TCTCGTGCTCTGCCTGCTTCACCTGAGCCTCAAGCTTaGAGATTGTCCTTTTCAAGTCAGAAATCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: SRALPASPEPQA*RLSFSSQKSEC
Trigger: ACACTCAGATTTCTGACTTGAAAAGGACAATCTCAAAGCTTGAGGCTCAGGTGAAGCAGGCAGAGCACGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147737.8
CDS-3UTR TCA 90 bp TACATCTATTACACACTTCAAAAACCAAAGCTTACGCTTTCTAAGGAGCGCAGACTGGGACTGACTGACTaGGGCCACTGTGACAGTGTT +
Preference number: 4 (lower is better)
Translates to: YIYYTLQKPKLTLSKERRLGLTD*GHCDSV
Trigger: AACACTGTCACAGTGGCCTCAGTCAGTCAGTCCCAG...TCTGCGCTCCTTAGAAAGCGTAAGCTTTGGTTTTTGAAGTGTGTAATAGATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR TCA 90 bp AACTCTGTAGTCACAGTGAAGGCAAGGCAGGCAATGATCAGCAGATGCGTGGTTTTCAAGTCAGAAATCTaGGTGTGTGCATCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: NSVVTVKARQAMISRCVVFKSEI*VCASSN
Trigger: ATTGCTTGATGCACACACTCAGATTTCTGACTTGAA...AACCACGCATCTGCTGATCATTGCCTGCCTTGCCTTCACTGTGACTACAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR TCA 90 bp AGAAGAGAGGGGCACAGCTCCACAGCTGGAGAGTTTATTTTCTATGTACATGTTCTTCAGTCCATTTGGTaGGTGTTCAGGACAAGAGCT +
Preference number: 4 (lower is better)
Translates to: RREGHSSTAGEFIFYVHVLQSIW*VFRTRA
Trigger: AGCTCTTGTCCTGAACACTCACCAAATGGACTGAAG...AACATGTACATAGAAAATAAACTCTCCAGCTGTGGAGCTGTGCCCCTCTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR GCA 90 bp ACAGCGCTCTTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTAGACTTACCACTATTTaGTTTCCCACTGTACACTTC +
Preference number: 4 (lower is better)
Translates to: TALLQRIREWHPGDGLKSRLTTI*FPTVHF
Trigger: GAAGTGTACAGTGGGAAAGCAAATAGTGGTAAGTCT...AGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAAGAGCGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp AGCTCAGACGACTCTGTCTGCAGACTCAGAGCACAAATATGTGGGTGCTGGGTTAAAGATTTGCAGAGCTaGGCAAAACATGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: SSDDSVCRLRAQICGCWVKDLQS*AKHETS
Trigger: AGAAGTTTCATGTTTTGCGCAGCTCTGCAAATCTTT...AACCCAGCACCCACATATTTGTGCTCTGAGTCTGCAGACAGAGTCGTCTGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp ACTCTAAGTAGTTTCTCATCGTGGAGAAAGAACTCAGGGGCAAACCAAAATCAACCTCTCTGCTGGGGATaGTGCAAACGTCTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: TLSSFSSWRKNSGANQNQPLCWG*CKRLLQ
Trigger: TTGGAGAAGACGTTTGCACCATCCCCAGCAGAGAGG...TTGATTTTGGTTTGCCCCTGAGTTCTTTCTCCACGATGAGAAACTACTTAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR CCA 90 bp AGCGGCAAGCACTTTTACCTGCTGAACCTTCTTGCTGGCCCAATTATTCTACTATTCCAGAACGGAGTCTaGGGAAAAGGATATTCTGTC +
Preference number: 4 (lower is better)
Translates to: SGKHFYLLNLLAGPIILLFQNGV*GKGYSV
Trigger: GACAGAATATCCTTTTCCCCAGACTCCGTTCTGGAA...TAGTAGAATAATTGGGCCAGCAAGAAGGTTCAGCAGGTAAAAGTGCTTGCCGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp GCTTTATGCTTAATGGAAACTGGAGCCACCCTGGGAACAGCCCAAGATGGGTCAAGTGCTGCCTCAATCTaGTCTTTTTCTTTTGTAAGT +
Preference number: 4 (lower is better)
Translates to: ALCLMETGATLGTAQDGSSAASI*SFSFVS
Trigger: ACTTACAAAAGAAAAAGACCAGATTGAGGCAGCACT...TGACCCATCTTGGGCTGTTCCCAGGGTGGCTCCAGTTTCCATTAAGCATAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
3UTR CAA 72 bp CAAGCACGCTACCACCACGTGGACAACACTCTCAGCTaGTCAATTCTGCATATCACATGGAAGGACATATTA +
Preference number: 4 (lower is better)
Translates to: QARYHHVDNTLS*SILHITWKDIL
Trigger: TAATATGTCCTTCCATGTGATATGCAGAATTGACAAGCTGAGAGTGTTGTCCACGTGGTGGTAGCGTGCTTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
CDS-3UTR TCA 90 bp AGTACATCCCAGCATAGAAACAGTTTGCCTCTCTTGGGTAACAGATGCTCTTTACTTGTCTTAAAGCAGTaGGGACTTCCACTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: STSQHRNSLPLLGNRCSLLVLKQ*GLPLSL
Trigger: AAGGGACAGTGGAAGTCCTCACTGCTTTAAGACAAG...TAAAGAGCATCTGTTACCCAAGAGAGGCAAACTGTTTCTATGCTGGGATGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
CDS-3UTR TCA 90 bp AAAGTTCATTGTAAAAGGGTAACACTATTTCTTTACAAACAAGCTGCCTCCCCAAGTGATGGTGTAGCGTaGAGGGATGGTGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KVHCKRVTLFLYKQAASPSDGVA*RDGGAG
Trigger: ACCAGCTCCACCATCCCTTCACGCTACACCATCACT...TGGGGAGGCAGCTTGTTTGTAAAGAAATAGTGTTACCCTTTTACAATGAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp ACTCTAAGTAGTTTCTCATCGTGGAGAAAGAACTCAGGGGCAAACCAAAATCAAGAAGCATGGCTGAGCTaGAGTTTCACTAACTTCCGG +
Preference number: 4 (lower is better)
Translates to: TLSSFSSWRKNSGANQNQEAWLS*SFTNFR
Trigger: CCGGAAGTTAGTGAAACTGCAGCTCAGCCATGCTTC...TTGATTTTGGTTTGCCCCTGAGTTCTTTCTCCACGATGAGAAACTACTTAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR GCA 90 bp AATCATGGAACTTTTGAAGGAAACGGTACTGTAGTCAAGCCAACATTAAACCATCTGGGGTCCAGAGGCTaGCCAGTAAAGATGGAGTAC +
Preference number: 4 (lower is better)
Translates to: NHGTFEGNGTVVKPTLNHLGSRG*PVKMEY
Trigger: GTACTCCATCTTTACTGGGCAGCCTCTGGACCCCAG...ATGGTTTAATGTTGGCTTGACTACAGTACCGTTTCCTTCAAAAGTTCCATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR CCA 90 bp TACATCTATTACACACTTCAAAAACCAAAGCTTACGCTTTCTAAGGAGCGCAGATGCGACATGCTCCTTTaGCTTCATGCGTATGGCTCC +
Preference number: 4 (lower is better)
Translates to: YIYYTLQKPKLTLSKERRCDMLL*LHAYGS
Trigger: GGAGCCATACGCATGAAGCCAAAGGAGCATGTCGCA...TCTGCGCTCCTTAGAAAGCGTAAGCTTTGGTTTTTGAAGTGTGTAATAGATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR CCA 90 bp AGAAGAGAGGGGCACAGCTCCACAGCTGGAGAGTTTATTTTCTATGTACATGTTGCTGCTTCTTTGCAGTaGTTTGTTGTAACGTGGACA +
Preference number: 4 (lower is better)
Translates to: RREGHSSTAGEFIFYVHVAASLQ*FVVTWT
Trigger: TGTCCACGTTACAACAAACCACTGCAAAGAAGCAGC...AACATGTACATAGAAAATAAACTCTCCAGCTGTGGAGCTGTGCCCCTCTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR CAA 72 bp GCCTCTGTGCCCAGGATGTTACAGACTTACCACTATTaGCTTTCCCACTGTACACTTCAGAGATCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: ASVPRMLQTYHY*LSHCTLQRSCF
Trigger: AAAACAAGATCTCTGAAGTGTACAGTGGGAAAGCAAATAGTGGTAAGTCTGTAACATCCTGGGCACAGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130502.8
ENSMUST00000141203.8
ENSMUST00000147737.8
CDS-3UTR TCA 90 bp AAATCATCAACCTTAAAAAGAAATCACTGGGTTGGGAACATAGCTCAGTGGCAGACCTGGGAAGGATTATaGCTTGCTTGTGAAGACGAG +
Preference number: 4 (lower is better)
Translates to: KSSTLKRNHWVGNIAQWQTWEGL*LACEDE
Trigger: CTCGTCTTCACAAGCAAGTCATAATCCTTCCCAGGT...CTGCCACTGAGCTATGTTCCCAACCCAGTGATTTCTTTTTAAGGTTGATGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR TCA 90 bp CTTCAAAAACCAAAGCTTACGCTTTCTAAGGAGCGCAGATGTTCTGATGGCGTTTTTTTGCTAAGGAGATaGCTAAATCCAGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: LQKPKLTLSKERRCSDGVFLLRR*LNPGDR
Trigger: TCTGTCCCCTGGATTTAGTCATCTCCTTAGCAAAAA...AACGCCATCAGAACATCTGCGCTCCTTAGAAAGCGTAAGCTTTGGTTTTTGAAG
43% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR CCA 90 bp ACTCTAAGTAGTTTCTCATCGTGGAGAAAGAACTCAGGGGCAAACCAAAATCAAATTCCCCAGGAAAAGTaGAGCCGTCTTCCTTTAGAG +
Preference number: 4 (lower is better)
Translates to: TLSSFSSWRKNSGANQNQIPQEK*SRLPLE
Trigger: CTCTAAAGGAAGACGGCTCCACTTTTCCTGGGGAAT...TTGATTTTGGTTTGCCCCTGAGTTCTTTCTCCACGATGAGAAACTACTTAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR CAA 72 bp GTTCAAGTGTACAATGGAAGTAAGACAGGATTATCTTaGAACTCTGTAGTCACAGTGAAGGCAAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: VQVYNGSKTGLS*NSVVTVKARQA
Trigger: TGCCTGCCTTGCCTTCACTGTGACTACAGAGTTCAAAGATAATCCTGTCTTACTTCCATTGTACACTTGAAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
3UTR CAA 72 bp CGTTCTCTCAAGTCACTCACTTCTATTTCTAGCAAGTaGTTGTTCTTCTCAAGTGTGCGCACTCGACTAGTA +
Preference number: 4 (lower is better)
Translates to: RSLKSLTSISSK*LFFSSVRTRLV
Trigger: TACTAGTCGAGTGCGCACACTTGAGAAGAACAACAACTTGCTAGAAATAGAAGTGAGTGACTTGAGAGAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130502.8
ENSMUST00000147737.8
CDS-3UTR TCA 90 bp AAAGTTCATTGTAAAAGGGTAACACTATTTCTTTACAAACAAGCTGCCTCCCCAACTCTTCCAAAGTTCTaGGTCAGTCCGGCCACTGTT +
Preference number: 4 (lower is better)
Translates to: KVHCKRVTLFLYKQAASPTLPKF*VSPATV
Trigger: AACAGTGGCCGGACTGACTCAGAACTTTGGAAGAGT...TGGGGAGGCAGCTTGTTTGTAAAGAAATAGTGTTACCCTTTTACAATGAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp AAATCATCAACCTTAAAAAGAAATCACTGGGTTGGGAACATAGCTCAGTGGCAGCGCTTCCTTATCATCTaGGAGCTTGTAAGCATTCTC +
Preference number: 4 (lower is better)
Translates to: KSSTLKRNHWVGNIAQWQRFLII*ELVSIL
Trigger: GAGAATGCTTACAAGCTCTCAGATGATAAGGAAGCG...CTGCCACTGAGCTATGTTCCCAACCCAGTGATTTCTTTTTAAGGTTGATGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR TCA 90 bp AGCGGCAAGCACTTTTACCTGCTGAACCTTCTTGCTGGCCCAATTATTCTACTATCTCCTAAGAGATCCTaGAACATCTTGTTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: SGKHFYLLNLLAGPIILLSPKRS*NILFSC
Trigger: ACAAGAAAACAAGATGTTTCAGGATCTCTTAGGAGA...TAGTAGAATAATTGGGCCAGCAAGAAGGTTCAGCAGGTAAAAGTGCTTGCCGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp AATCATGGAACTTTTGAAGGAAACGGTACTGTAGTCAAGCCAACATTAAACCATTCTGCCTGCTTCACCTaGGCCTCAAGCTTTGAGATT +
Preference number: 4 (lower is better)
Translates to: NHGTFEGNGTVVKPTLNHSACFT*ASSFEI
Trigger: AATCTCAAAGCTTGAGGCTCAGGTGAAGCAGGCAGA...ATGGTTTAATGTTGGCTTGACTACAGTACCGTTTCCTTCAAAAGTTCCATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR GCA 90 bp AAAGTTCATTGTAAAAGGGTAACACTATTTCTTTACAAACAAGCTGCCTCCCCAGAAGCATGGCTGAGCTaGAGTTTCACTAACTTCCGG +
Preference number: 4 (lower is better)
Translates to: KVHCKRVTLFLYKQAASPEAWLS*SFTNFR
Trigger: CCGGAAGTTAGTGAAACTGCAGCTCAGCCATGCTTC...TGGGGAGGCAGCTTGTTTGTAAAGAAATAGTGTTACCCTTTTACAATGAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp AGCGGCAAGCACTTTTACCTGCTGAACCTTCTTGCTGGCCCAATTATTCTACTAAAAGATTTGCAGAGCTaGGCAAAACATGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: SGKHFYLLNLLAGPIILLKDLQS*AKHETS
Trigger: AGAAGTTTCATGTTTTGCGCAGCTCTGCAAATCTTT...TAGTAGAATAATTGGGCCAGCAAGAAGGTTCAGCAGGTAAAAGTGCTTGCCGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp TTCTTGCTGGCCCAATTATTCTACTATTCAAGGCATGTGTTTCACATAGGAATTAGTCAGCCCTGTTCCTaGATCAGACAACCAAGAACT +
Preference number: 4 (lower is better)
Translates to: FLLAQLFYYSRHVFHIGISQPCS*IRQPRT
Trigger: AGTTCTTGGTTGTCTGATTCAGGAACAGGGCTGACT...AATTCCTATGTGAAACACATGCCTTGAATAGTAGAATAATTGGGCCAGCAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp CATGGAACTTTTGAAGGAAACGGTACTGTAGTCAAGCCAACATTAAACCATAGTGAGCTGCGCAAAACATaGAACTTCTTGAGGGTCATT +
Preference number: 4 (lower is better)
Translates to: HGTFEGNGTVVKPTLNHSELRKT*NFLRVI
Trigger: AATGACCCTCAAGAAGTTTCATGTTTTGCGCAGCTC...ACTATGGTTTAATGTTGGCTTGACTACAGTACCGTTTCCTTCAAAAGTTCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR GCA 90 bp TTCTTGCTGGCCCAATTATTCTACTATTCAAGGCATGTGTTTCACATAGGAATTGGGAAGCCAATGAAATaGATTCTGGGACACTGTTGG +
Preference number: 4 (lower is better)
Translates to: FLLAQLFYYSRHVFHIGIGKPMK*ILGHCW
Trigger: CCAACAGTGTCCCAGAATGCATTTCATTGGCTTCCC...AATTCCTATGTGAAACACATGCCTTGAATAGTAGAATAATTGGGCCAGCAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp AAAGTTCATTGTAAAAGGGTAACACTATTTCTTTACAAACAAGCTGCCTCCCCAAGCCCAGTTCACGGTTaGTCTTTTCCAAACGATCTT +
Preference number: 4 (lower is better)
Translates to: KVHCKRVTLFLYKQAASPSPVHG*SFPNDL
Trigger: AAGATCGTTTGGAAAAGATCAACCGTGAACTGGGCT...TGGGGAGGCAGCTTGTTTGTAAAGAAATAGTGTTACCCTTTTACAATGAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp AAAGTTCATTGTAAAAGGGTAACACTATTTCTTTACAAACAAGCTGCCTCCCCAAGTAGCTTCATTCAATaGACTATCCAGCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: KVHCKRVTLFLYKQAASPSSFIQ*TIQLAT
Trigger: TGTGGCCAGCTGGATAGTGCATTGAATGAAGCTACT...TGGGGAGGCAGCTTGTTTGTAAAGAAATAGTGTTACCCTTTTACAATGAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp AAAGTTCATTGTAAAAGGGTAACACTATTTCTTTACAAACAAGCTGCCTCCCCATTCCAGAACGGAGTCTaGGGAAAAGGATATTCTGTC +
Preference number: 4 (lower is better)
Translates to: KVHCKRVTLFLYKQAASPFQNGV*GKGYSV
Trigger: GACAGAATATCCTTTTCCCCAGACTCCGTTCTGGAA...TGGGGAGGCAGCTTGTTTGTAAAGAAATAGTGTTACCCTTTTACAATGAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp AAAGTTCATTGTAAAAGGGTAACACTATTTCTTTACAAACAAGCTGCCTCCCCACGGCAGAAATGTCTTTaGCCTCCAGTTTCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: KVHCKRVTLFLYKQAASPRQKCL*PPVSVS
Trigger: TGAAACAGAAACTGGAGGCCAAAGACATTTCTGCCG...TGGGGAGGCAGCTTGTTTGTAAAGAAATAGTGTTACCCTTTTACAATGAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp AAAGTTCATTGTAAAAGGGTAACACTATTTCTTTACAAACAAGCTGCCTCCCCATCATCTAGCAGAAACTaGAGCTGCTTCTTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: KVHCKRVTLFLYKQAASPSSSRN*SCFFAV
Trigger: CACTGCAAAGAAGCAGCTCCAGTTTCTGCTAGATGA...TGGGGAGGCAGCTTGTTTGTAAAGAAATAGTGTTACCCTTTTACAATGAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp AAAGTTCATTGTAAAAGGGTAACACTATTTCTTTACAAACAAGCTGCCTCCCCATCTTCAATTCGTTCCTaGAAAACTTTGGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: KVHCKRVTLFLYKQAASPSSIRS*KTLEAL
Trigger: CAGTGCCTCCAAAGTTTTGCAGGAACGAATTGAAGA...TGGGGAGGCAGCTTGTTTGTAAAGAAATAGTGTTACCCTTTTACAATGAACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CCA 90 bp AAAGTTCATTGTAAAAGGGTAACACTATTTCTTTACAAACAAGCTGCCTCCCCATCCCTTTGGAATGCATaGTTTTTCCAAGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: KVHCKRVTLFLYKQAASPSLWNA*FFQVST
Trigger: TGTGGACACTTGGAAAAACCATGCATTCCAAAGGGA...TGGGGAGGCAGCTTGTTTGTAAAGAAATAGTGTTACCCTTTTACAATGAACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR TCA 90 bp TTCTTGCTGGCCCAATTATTCTACTATTCAAGGCATGTGTTTCACATAGGAATTTTCAAGTCAGAAATCTaGGTGTGTGCATCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: FLLAQLFYYSRHVFHIGIFKSEI*VCASSN
Trigger: ATTGCTTGATGCACACACTCAGATTTCTGACTTGAA...AATTCCTATGTGAAACACATGCCTTGAATAGTAGAATAATTGGGCCAGCAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR GCA 90 bp TTCTTGCTGGCCCAATTATTCTACTATTCAAGGCATGTGTTTCACATAGGAATTAGACTTACCACTATTTaGTTTCCCACTGTACACTTC +
Preference number: 4 (lower is better)
Translates to: FLLAQLFYYSRHVFHIGIRLTTI*FPTVHF
Trigger: GAAGTGTACAGTGGGAAAGCAAATAGTGGTAAGTCT...AATTCCTATGTGAAACACATGCCTTGAATAGTAGAATAATTGGGCCAGCAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
3UTR CAA 72 bp CTCAGACATCACAAGTCTAGTAACATTATAAGCCAGTaGCTGATATACATACTTAGACAACATCACAGGATC +
Preference number: 4 (lower is better)
Translates to: LRHHKSSNIISQ*LIYILRQHHRI
Trigger: GATCCTGTGATGTTGTCTAAGTATGTATATCAGCAACTGGCTTATAATGTTACTAGACTTGTGATGTCTGAG
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141203.8
CDS-3UTR CCA 90 bp AATCATGGAACTTTTGAAGGAAACGGTACTGTAGTCAAGCCAACATTAAACCATAGTGCTGCCTCAATCTaGTCTTTTTCTTTTGTAAGT +
Preference number: 4 (lower is better)
Translates to: NHGTFEGNGTVVKPTLNHSAASI*SFSFVS
Trigger: ACTTACAAAAGAAAAAGACCAGATTGAGGCAGCACT...ATGGTTTAATGTTGGCTTGACTACAGTACCGTTTCCTTCAAAAGTTCCATGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR CAA 90 bp TCCTATCCTTTGGTCTCTACACTGAGGAAAGCAGGCCTGAGCCAGGGTGTGGCCGTGGGCTCCTTAGCCTaGTGGGTGTTCATGTCCAGG +
Preference number: 5 (lower is better)
Translates to: SYPLVSTLRKAGLSQGVAVGSLA*WVFMSR
Trigger: CCTGGACATGAACACCCACAAGGCTAAGGAGCCCAC...GGCCACACCCTGGCTCAGGCCTGCTTTCCTCAGTGTAGAGACCAAAGGATAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR CAA 90 bp GTCGTCAAGAGCATGCAGAAAGCCATGGGCTTGGATCCCTGCGACATGCTCCTTGACTTCCACTGTCCCTaGAATGACAGGTGGCCCGGT +
Preference number: 5 (lower is better)
Translates to: VVKSMQKAMGLDPCDMLLDFHCP*NDRWPG
Trigger: ACCGGGCCACCTGTCATTCAAGGGACAGTGGAAGTC...AAGGAGCATGTCGCAGGGATCCAAGCCCATGGCTTTCTGCATGCTCTTGACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141203.8
ENSMUST00000147737.8
CDS-3UTR CAA 90 bp TTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAGGGGACTTCCACTGTCCCTaGAATGACAGGTGGCCCGGT +
Preference number: 5 (lower is better)
Translates to: LQRIREWHPGDGLKSAAGDFHCP*NDRWPG
Trigger: ACCGGGCCACCTGTCATTCAAGGGACAGTGGAAGTC...CCCTGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp TTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAGGGGTGGGCTCCTTAGCCTaGTGGGTGTTCATGTCCAGG +
Preference number: 5 (lower is better)
Translates to: LQRIREWHPGDGLKSAAGVGSLA*WVFMSR
Trigger: CCTGGACATGAACACCCACAAGGCTAAGGAGCCCAC...CCCTGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp ATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAGGGCCCTGGGGAGAGCCCAGTTCACGGTaGATCTTTTCCAAACGATCT +
Preference number: 5 (lower is better)
Translates to: IREWHPGDGLKSAAGPWGEPSSR*IFSKRS
Trigger: AGATCGTTTGGAAAAGATCAACCGTGAACTGGGCTC...TCCCCAGGGCCCTGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp TTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAGGGCATTCTGGGACACTGTaGGCTGTACCTGGAAGCTGG +
Preference number: 5 (lower is better)
Translates to: LQRIREWHPGDGLKSAAGHSGTL*AVPGSW
Trigger: CCAGCTTCCAGGTACAGCCAACAGTGTCCCAGAATG...CCCTGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp ATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAGGGCCCTGGGGACTTTCTTCAGTCCATTaGGTGAGTGTTCAGGACAAG +
Preference number: 5 (lower is better)
Translates to: IREWHPGDGLKSAAGPWGLSSVH*VSVQDK
Trigger: CTTGTCCTGAACACTCACCAAATGGACTGAAGAAAG...TCCCCAGGGCCCTGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS TCA 90 bp GAGGACTTCCACTGTCCCTTGAATGACAGGTGGCCCGGTCTTCCCTaGGAAAGAGGACACCCCATTTGTACTAAGGTGGGGACTACTTCT +
Preference number: 5 (lower is better)
Translates to: EDFHCPLNDRWPGLP*ERGHPICTKVGTTS
Trigger: AGAAGTAGTCCCCACCTTAGTACAAATGGGGTGTCCTCTTTCTCAGGGAAGACCGGGCCACCTGTCATTCAAGGGACAGTGGAAGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp GACAGGCTTGGTTCCAGAACGGAGTCTGGGGAAAAGGATATTCTGTCGTCAAGAGACTTCCACTGTCCCTaGAATGACAGGTGGCCCGGT +
Preference number: 5 (lower is better)
Translates to: DRLGSRTESGEKDILSSRDFHCP*NDRWPG
Trigger: ACCGGGCCACCTGTCATTCAAGGGACAGTGGAAGTC...TCTTGACGACAGAATATCCTTTTCCCCAGACTCCGTTCTGGAACCAAGCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000141203.8
ENSMUST00000147737.8
CDS-3UTR CAA 90 bp GAGCTCAGAAGACAACTTGAGGGAGTCGTTTCTCTCTTTCTAACGCGTGGGTCCCTGCGACATGCTCCTTaGGCTTCATGCGTATGGCTC +
Preference number: 5 (lower is better)
Translates to: ELRRQLEGVVSLFLTRGSLRHAP*ASCVWL
Trigger: GAGCCATACGCATGAAGCCAAAGGAGCATGTCGCAG...GGACCCACGCGTTAGAAAGAGAGAAACGACTCCCTCAAGTTGTCTTCTGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp ACAGACAGGATACTTGCTGCTCCTAGCTGGGAACAGCTTCTCCTGCCCACACAGGTGATGCTCTCGTGGTaGAAGGATACTTGGAGAACC +
Preference number: 5 (lower is better)
Translates to: TDRILAAPSWEQLLLPTQVMLSW*KDTWRT
Trigger: GGTTCTCCAAGTATCCTTCAACCACGAGAGCATCAC...CTGTGTGGGCAGGAGAAGCTGTTCCCAGCTAGGAGCAGCAAGTATCCTGTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp CTATCCTTTGGTCTCTACACTGAGGAAAGCAGGCCTGAGCCAGGGTGTGGCCCGGGTCCTACTTTCCCTTaGGAATGCATGGTTTTTCCA +
Preference number: 5 (lower is better)
Translates to: LSFGLYTEESRPEPGCGPGPTFP*ECMVFP
Trigger: TGGAAAAACCATGCATTCCAAAGGGAAAGTAGGACC...CGGGCCACACCCTGGCTCAGGCCTGCTTTCCTCAGTGTAGAGACCAAAGGATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR CAA 90 bp AGCTCAGACGACTCTGTCTGCAGACTCAGAGCACAAATATGTGGGTGCTGGGTTCATTCTGGGACACTGTaGGCTGTACCTGGAAGCTGG +
Preference number: 5 (lower is better)
Translates to: SSDDSVCRLRAQICGCWVHSGTL*AVPGSW
Trigger: CCAGCTTCCAGGTACAGCCAACAGTGTCCCAGAATG...AACCCAGCACCCACATATTTGTGCTCTGAGTCTGCAGACAGAGTCGTCTGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp GCTTTATGCTTAATGGAAACTGGAGCCACCCTGGGAACAGCCCAAGATGGGTCACGTTCCTGCAAAACTTaGGAGGCACTGCTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: ALCLMETGATLGTAQDGSRSCKT*EALLAA
Trigger: TGCAGCCAGCAGTGCCTCCAAAGTTTTGCAGGAACG...TGACCCATCTTGGGCTGTTCCCAGGGTGGCTCCAGTTTCCATTAAGCATAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS CCA 90 bp GGCCCGGTCTTCCCTGAGAAAGAGGACACCCCATTTGTACTAAGGTaGGGACTACTTCTATTAGCATGCAAGCTCAACCCAAGGGATTGG +
Preference number: 5 (lower is better)
Translates to: GPVFPEKEDTPFVLR*GLLLLACKLNPRDW
Trigger: CCAATCCCTTGGGTTGAGCTTGCATGCTAATAGAAGTAGTCCCCACCTTAGTACAAATGGGGTGTCCTCTTTCTCAGGGAAGACCGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp GAGCTCAGAAGACAACTTGAGGGAGTCGTTTCTCTCTTTCTAACGCGTGGGTCCCTGTATGTGCCTGCTTaGACTGGTTCTGCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: ELRRQLEGVVSLFLTRGSLYVPA*TGSASA
Trigger: GGCTGAAGCAGAACCAGTCAAAGCAGGCACATACAG...GGACCCACGCGTTAGAAAGAGAGAAACGACTCCCTCAAGTTGTCTTCTGAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp AGCTCAGACGACTCTGTCTGCAGACTCAGAGCACAAATATGTGGGTGCTGGGTTCTGTATGTGCCTGCTTaGACTGGTTCTGCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: SSDDSVCRLRAQICGCWVLYVPA*TGSASA
Trigger: GGCTGAAGCAGAACCAGTCAAAGCAGGCACATACAG...AACCCAGCACCCACATATTTGTGCTCTGAGTCTGCAGACAGAGTCGTCTGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp ACAGCGCTCTTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTCTGCGACATGCTCCTTaGGCTTCATGCGTATGGCTC +
Preference number: 5 (lower is better)
Translates to: TALLQRIREWHPGDGLKSLRHAP*ASCVWL
Trigger: GAGCCATACGCATGAAGCCAAAGGAGCATGTCGCAG...AGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAAGAGCGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp AGCTCAGACGACTCTGTCTGCAGACTCAGAGCACAAATATGTGGGTGCTGGGTTCGGGCATGCTTCTCCTaGAGGTTCTGCCTGATCTTA +
Preference number: 5 (lower is better)
Translates to: SSDDSVCRLRAQICGCWVRACFS*RFCLIL
Trigger: TAAGATCAGGCAGAACCTCAAGGAGAAGCATGCCCG...AACCCAGCACCCACATATTTGTGCTCTGAGTCTGCAGACAGAGTCGTCTGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp AGCTGGGAACAGCTTCTCCTGCCCACACAGCGCTCTTACAGAGAATTAGGGAATCGGGCATGCTTCTCCTaGAGGTTCTGCCTGATCTTA +
Preference number: 5 (lower is better)
Translates to: SWEQLLLPTQRSYRELGNRACFS*RFCLIL
Trigger: TAAGATCAGGCAGAACCTCAAGGAGAAGCATGCCCG...ATTCCCTAATTCTCTGTAAGAGCGCTGTGTGGGCAGGAGAAGCTGTTCCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp TTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAGGGACTGGAGCTGCTTCTTaGCAGTGGTTTGTTGTAACG +
Preference number: 5 (lower is better)
Translates to: LQRIREWHPGDGLKSAAGTGAAS*QWFVVT
Trigger: CGTTACAACAAACCACTGCAAAGAAGCAGCTCCAGT...CCCTGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp AGCTCAGACGACTCTGTCTGCAGACTCAGAGCACAAATATGTGGGTGCTGGGTTACTCTTCTCCCAGGCTaGTCTCGTGGACACTTTCTT +
Preference number: 5 (lower is better)
Translates to: SSDDSVCRLRAQICGCWVTLLPG*SRGHFL
Trigger: AAGAAAGTGTCCACGAGACAAGCCTGGGAGAAGAGT...AACCCAGCACCCACATATTTGTGCTCTGAGTCTGCAGACAGAGTCGTCTGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp ACAGCGCTCTTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGTGATGCTCTCGTGGTaGAAGGATACTTGGAGAACC +
Preference number: 5 (lower is better)
Translates to: TALLQRIREWHPGDGLKSVMLSW*KDTWRT
Trigger: GGTTCTCCAAGTATCCTTCAACCACGAGAGCATCAC...AGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAAGAGCGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp TTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTGCCGCAGGGGGTCCTACTTTCCCTTaGGAATGCATGGTTTTTCCA +
Preference number: 5 (lower is better)
Translates to: LQRIREWHPGDGLKSAAGGPTFP*ECMVFP
Trigger: TGGAAAAACCATGCATTCCAAAGGGAAAGTAGGACC...CCCTGCGGCAGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp ACAGACAGGATACTTGCTGCTCCTAGCTGGGAACAGCTTCTCCTGCCCACACAGATTTCTAGCAAGTTGTaGTTCTTCTCAAGTGTGCGC +
Preference number: 5 (lower is better)
Translates to: TDRILAAPSWEQLLLPTQISSKL*FFSSVR
Trigger: GCGCACACTTGAGAAGAACAACAACTTGCTAGAAAT...CTGTGTGGGCAGGAGAAGCTGTTCCCAGCTAGGAGCAGCAAGTATCCTGTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp AGCTGGGAACAGCTTCTCCTGCCCACACAGCGCTCTTACAGAGAATTAGGGAATACTGGAGCTGCTTCTTaGCAGTGGTTTGTTGTAACG +
Preference number: 5 (lower is better)
Translates to: SWEQLLLPTQRSYRELGNTGAAS*QWFVVT
Trigger: CGTTACAACAAACCACTGCAAAGAAGCAGCTCCAGT...ATTCCCTAATTCTCTGTAAGAGCGCTGTGTGGGCAGGAGAAGCTGTTCCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp GCTCTGAGCGCAGACCAATGGCTCTTACCGTGGAAGTGCTTTTCTCTTTGGCAAGAGCCCAGTTCACGGTaGATCTTTTCCAAACGATCT +
Preference number: 5 (lower is better)
Translates to: ALSADQWLLPWKCFSLWQEPSSR*IFSKRS
Trigger: AGATCGTTTGGAAAAGATCAACCGTGAACTGGGCTC...TTGCCAAAGAGAAAAGCACTTCCACGGTAAGAGCCATTGGTCTGCGCTCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp AACTCTGTAGTCACAGTGAAGGCAAGGCAGGCAATGATCAGCAGATGCGTGGTTACGGCAGAAATGTCTTaGGCCTCCAGTTTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: NSVVTVKARQAMISRCVVTAEMS*ASSFCF
Trigger: GAAACAGAAACTGGAGGCCAAAGACATTTCTGCCGT...AACCACGCATCTGCTGATCATTGCCTGCCTTGCCTTCACTGTGACTACAGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR CAA 90 bp ACAGCGCTCTTACAGAGAATTAGGGAATGGCACCCAGGTGACGGGTTAAAGTCTACGGCAGAAATGTCTTaGGCCTCCAGTTTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: TALLQRIREWHPGDGLKSTAEMS*ASSFCF
Trigger: GAAACAGAAACTGGAGGCCAAAGACATTTCTGCCGT...AGACTTTAACCCGTCACCTGGGTGCCATTCCCTAATTCTCTGTAAGAGCGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp AGCTGGGAACAGCTTCTCCTGCCCACACAGCGCTCTTACAGAGAATTAGGGAATCTTTCTTCAGTCCATTaGGTGAGTGTTCAGGACAAG +
Preference number: 5 (lower is better)
Translates to: SWEQLLLPTQRSYRELGNLSSVH*VSVQDK
Trigger: CTTGTCCTGAACACTCACCAAATGGACTGAAGAAAG...ATTCCCTAATTCTCTGTAAGAGCGCTGTGTGGGCAGGAGAAGCTGTTCCCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp CGGGCAGAAAACCCAGCTATCCACCTGCCACTTCCAGCTCTAATCATTTTCTTTACTCTTCTCCCAGGCTaGTCTCGTGGACACTTTCTT +
Preference number: 5 (lower is better)
Translates to: RAENPAIHLPLPALIIFFTLLPG*SRGHFL
Trigger: AAGAAAGTGTCCACGAGACAAGCCTGGGAGAAGAGT...AAAGAAAATGATTAGAGCTGGAAGTGGCAGGTGGATAGCTGGGTTTTCTGCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp AGCTGGGAACAGCTTCTCCTGCCCACACAGCGCTCTTACAGAGAATTAGGGAATCAGACTTACCACTATTaGCTTTCCCACTGTACACTT +
Preference number: 5 (lower is better)
Translates to: SWEQLLLPTQRSYRELGNQTYHY*LSHCTL
Trigger: AAGTGTACAGTGGGAAAGCAAATAGTGGTAAGTCTG...ATTCCCTAATTCTCTGTAAGAGCGCTGTGTGGGCAGGAGAAGCTGTTCCCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp AGCTCAGACGACTCTGTCTGCAGACTCAGAGCACAAATATGTGGGTGCTGGGTTAAACATCTTGTTTTCTaGTCTCAGCCTCGCTTCCTT +
Preference number: 5 (lower is better)
Translates to: SSDDSVCRLRAQICGCWVKHLVF*SQPRFL
Trigger: AAGGAAGCGAGGCTGAGACAAGAAAACAAGATGTTT...AACCCAGCACCCACATATTTGTGCTCTGAGTCTGCAGACAGAGTCGTCTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp TTCTTGCTGGCCCAATTATTCTACTATTCAAGGCATGTGTTTCACATAGGAATTGACTTCCACTGTCCCTaGAATGACAGGTGGCCCGGT +
Preference number: 5 (lower is better)
Translates to: FLLAQLFYYSRHVFHIGIDFHCP*NDRWPG
Trigger: ACCGGGCCACCTGTCATTCAAGGGACAGTGGAAGTC...AATTCCTATGTGAAACACATGCCTTGAATAGTAGAATAATTGGGCCAGCAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031344.13
ENSMUST00000147737.8
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp CTTCAAAAACCAAAGCTTACGCTTTCTAAGGAGCGCAGATGTTCTGATGGCGTTAGAAAAGAAGCCCATTaGGGTTTCTGCAGACACCTG +
Preference number: 5 (lower is better)
Translates to: LQKPKLTLSKERRCSDGVRKEAH*GFCRHL
Trigger: CAGGTGTCTGCAGAAACCCAAATGGGCTTCTTTTCT...AACGCCATCAGAACATCTGCGCTCCTTAGAAAGCGTAAGCTTTGGTTTTTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR CAA 90 bp AAATCATCAACCTTAAAAAGAAATCACTGGGTTGGGAACATAGCTCAGTGGCAGGCACTGCTGGCTGCATaGAAGCGTTCTCTCAAGTCA +
Preference number: 5 (lower is better)
Translates to: KSSTLKRNHWVGNIAQWQALLAA*KRSLKS
Trigger: TGACTTGAGAGAACGCTTCAATGCAGCCAGCAGTGC...CTGCCACTGAGCTATGTTCCCAACCCAGTGATTTCTTTTTAAGGTTGATGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR CAA 90 bp AGCGGCAAGCACTTTTACCTGCTGAACCTTCTTGCTGGCCCAATTATTCTACTAATTTCTAGCAAGTTGTaGTTCTTCTCAAGTGTGCGC +
Preference number: 5 (lower is better)
Translates to: SGKHFYLLNLLAGPIILLISSKL*FFSSVR
Trigger: GCGCACACTTGAGAAGAACAACAACTTGCTAGAAAT...TAGTAGAATAATTGGGCCAGCAAGAAGGTTCAGCAGGTAAAAGTGCTTGCCGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp AAAGTTCATTGTAAAAGGGTAACACTATTTCTTTACAAACAAGCTGCCTCCCCACGTTCCTGCAAAACTTaGGAGGCACTGCTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: KVHCKRVTLFLYKQAASPRSCKT*EALLAA
Trigger: TGCAGCCAGCAGTGCCTCCAAAGTTTTGCAGGAACG...TGGGGAGGCAGCTTGTTTGTAAAGAAATAGTGTTACCCTTTTACAATGAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp AGCGGCAAGCACTTTTACCTGCTGAACCTTCTTGCTGGCCCAATTATTCTACTATCTTCGTCTACAGTTTaGACTGAGATATCGTTGCTA +
Preference number: 5 (lower is better)
Translates to: SGKHFYLLNLLAGPIILLSSSTV*TEISLL
Trigger: TAGCAACGATATCTCAGTCAAAACTGTAGACGAAGA...TAGTAGAATAATTGGGCCAGCAAGAAGGTTCAGCAGGTAAAAGTGCTTGCCGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp AAAGTTCATTGTAAAAGGGTAACACTATTTCTTTACAAACAAGCTGCCTCCCCAGCACTGCTGGCTGCATaGAAGCGTTCTCTCAAGTCA +
Preference number: 5 (lower is better)
Translates to: KVHCKRVTLFLYKQAASPALLAA*KRSLKS
Trigger: TGACTTGAGAGAACGCTTCAATGCAGCCAGCAGTGC...TGGGGAGGCAGCTTGTTTGTAAAGAAATAGTGTTACCCTTTTACAATGAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp ACTCTAAGTAGTTTCTCATCGTGGAGAAAGAACTCAGGGGCAAACCAAAATCAAAAACATCTTGTTTTCTaGTCTCAGCCTCGCTTCCTT +
Preference number: 5 (lower is better)
Translates to: TLSSFSSWRKNSGANQNQKHLVF*SQPRFL
Trigger: AAGGAAGCGAGGCTGAGACAAGAAAACAAGATGTTT...TTGATTTTGGTTTGCCCCTGAGTTCTTTCTCCACGATGAGAAACTACTTAGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000031344.13
CDS-3UTR CAA 90 bp AAAGTTCATTGTAAAAGGGTAACACTATTTCTTTACAAACAAGCTGCCTCCCCACAGACTTACCACTATTaGCTTTCCCACTGTACACTT +
Preference number: 5 (lower is better)
Translates to: KVHCKRVTLFLYKQAASPQTYHY*LSHCTL
Trigger: AAGTGTACAGTGGGAAAGCAAATAGTGGTAAGTCTG...TGGGGAGGCAGCTTGTTTGTAAAGAAATAGTGTTACCCTTTTACAATGAACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS-3UTR CAA 90 bp TTCTTGCTGGCCCAATTATTCTACTATTCAAGGCATGTGTTTCACATAGGAATTTCTTCGTCTACAGTTTaGACTGAGATATCGTTGCTA +
Preference number: 5 (lower is better)
Translates to: FLLAQLFYYSRHVFHIGISSSTV*TEISLL
Trigger: TAGCAACGATATCTCAGTCAAAACTGTAGACGAAGA...AATTCCTATGTGAAACACATGCCTTGAATAGTAGAATAATTGGGCCAGCAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS TCA 72 bp CACTGTCCCTTGAATGACAGGTGGCCCGGTCTTCCCTaGGAAAGAGGACACCCCATTTGTACTAAGGTGGGG +
Preference number: 6 (lower is better)
Translates to: HCPLNDRWPGLP*ERGHPICTKVG
Trigger: CCCCACCTTAGTACAAATGGGGTGTCCTCTTTCTCAGGGAAGACCGGGCCACCTGTCATTCAAGGGACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS CCA 72 bp TTCCCTGAGAAAGAGGACACCCCATTTGTACTAAGGTaGGGACTACTTCTATTAGCATGCAAGCTCAACCCA +
Preference number: 6 (lower is better)
Translates to: FPEKEDTPFVLR*GLLLLACKLNP
Trigger: TGGGTTGAGCTTGCATGCTAATAGAAGTAGTCCCCACCTTAGTACAAATGGGGTGTCCTCTTTCTCAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8
CDS CAA 72 bp ACCTGGCCTATTAGCATGCAAGCTCAACCCAAGGGATaGGGGAGCGCTTTTAATATCAGATTCTACAGAAGG +
Preference number: 6 (lower is better)
Translates to: TWPISMQAQPKG*GSAFNIRFYRR
Trigger: CCTTCTGTAGAATCTGATATTAAAAGCGCTCCCCAATCCCTTGGGTTGAGCTTGCATGCTAATAGGCCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000130502.8
CDS CAA 72 bp GTCTTCCCTATTAGCATGCAAGCTCAACCCAAGGGATaGGGGAGCGCTTTTAATATCAGATTCTACAGAAGG +
Preference number: 6 (lower is better)
Translates to: VFPISMQAQPKG*GSAFNIRFYRR
Trigger: CCTTCTGTAGAATCTGATATTAAAAGCGCTCCCCAATCCCTTGGGTTGAGCTTGCATGCTAATAGGGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000141203.8
ENSMUST00000147737.8
CDS CAA 72 bp ACTACTTCTATTAGCATGCAAGCTCAACCCAAGGGATaGGGGAGCGCTTTTAATATCAGATTCTACAGAAGG +
Preference number: 6 (lower is better)
Translates to: TTSISMQAQPKG*GSAFNIRFYRR
Trigger: CCTTCTGTAGAATCTGATATTAAAAGCGCTCCCCAATCCCTTGGGTTGAGCTTGCATGCTAATAGAAGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031344.13
ENSMUST00000184951.8