Pregenerated sensors for MPHOSPH8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079184Ensembl transcript IDs: ENSMUST00000116468.2
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CGTACTGTTCCACATTGTGGAAATAAACTAAGCAGAACATTGAACGTTTTCGACACCAGAATTCCAAACTaGTACAGGGATGGTCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: RTVPHCGNKLSRTLNVFDTRIPN*YRDGPW Trigger: CCAAGGACCATCCCTGTAGCAGTTTGGAATTCTGGT...GTCGAAAACGTTCAATGTTCTGCTTAGTTTATTTCCACAATGTGGAACAGTACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| 3UTR-3UTR TCA 90 bp | CGTACTGTTCCACATTGTGGAAATAAACTAAGCAGAACATTGAACGTTTTCGACATATGTAGACAAACCTaGACAGGCAGCAGGCTTAAA | + |
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Preference number: 2 (lower is better) Translates to: RTVPHCGNKLSRTLNVFDICRQT*TGSRLK Trigger: TTTAAGCCTGCTGCCTGTTCAGGTTTGTCTACATAT...GTCGAAAACGTTCAATGTTCTGCTTAGTTTATTTCCACAATGTGGAACAGTACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR TCA 90 bp | ACTGCTACAGGGATGGTCCTTGGAATCCAGCTGAAAAGAGGCCGGTTCTCCATCCTGTCTGAAACTTCCTaGTCCCCTTCTGCAGCAATG | + |
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Preference number: 4 (lower is better) Translates to: TATGMVLGIQLKRGRFSILSETS*SPSAAM Trigger: CATTGCTGCAGAAGGGGATCAGGAAGTTTCAGACAG...GATGGAGAACCGGCCTCTTTTCAGCTGGATTCCAAGGACCATCCCTGTAGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR GCA 90 bp | ACTGCTACAGGGATGGTCCTTGGAATCCAGCTGAAAAGAGGCCGGTTCTCCATCTTCCTGATCCCCTTCTaGAGCAATGTATGCCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: TATGMVLGIQLKRGRFSIFLIPF*SNVCPS Trigger: ACTTGGGCATACATTGCTGCAGAAGGGGATCAGGAA...GATGGAGAACCGGCCTCTTTTCAGCTGGATTCCAAGGACCATCCCTGTAGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR GCA 90 bp | ACTGCTACAGGGATGGTCCTTGGAATCCAGCTGAAAAGAGGCCGGTTCTCCATCTTCTGCAGCAATGTATaGCCAAGTGTCAGTCTCATC | + |
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Preference number: 4 (lower is better) Translates to: TATGMVLGIQLKRGRFSIFCSNV*PSVSLI Trigger: GATGAGACTGACACTTGGGCATACATTGCTGCAGAA...GATGGAGAACCGGCCTCTTTTCAGCTGGATTCCAAGGACCATCCCTGTAGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR GCA 90 bp | ACTGCTACAGGGATGGTCCTTGGAATCCAGCTGAAAAGAGGCCGGTTCTCCATCTTGCACTGTCTCCTGTaGTGTCTTATCTCTTACACT | + |
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Preference number: 4 (lower is better) Translates to: TATGMVLGIQLKRGRFSILHCLL*CLISYT Trigger: AGTGTAAGAGATAAGACAGCACAGGAGACAGTGCAA...GATGGAGAACCGGCCTCTTTTCAGCTGGATTCCAAGGACCATCCCTGTAGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR GCA 90 bp | TTCCAAACTGCTACAGGGATGGTCCTTGGAATCCAGCTGAAAAGAGGCCGGTTCGCGCAGTCTCACCATTaGTTTGCTGAACATTCACAA | + |
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Preference number: 4 (lower is better) Translates to: FQTATGMVLGIQLKRGRFAQSHH*FAEHSQ Trigger: TTGTGAATGTTCAGCAAAGCAATGGTGAGACTGCGC...GAACCGGCCTCTTTTCAGCTGGATTCCAAGGACCATCCCTGTAGCAGTTTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR GCA 90 bp | ACTGCTACAGGGATGGTCCTTGGAATCCAGCTGAAAAGAGGCCGGTTCTCCATCGTCGCTATCACTGTCTaGCTCAAATATGTCATTGTT | + |
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Preference number: 4 (lower is better) Translates to: TATGMVLGIQLKRGRFSIVAITV*LKYVIV Trigger: AACAATGACATATTTGAGGCAGACAGTGATAGCGAC...GATGGAGAACCGGCCTCTTTTCAGCTGGATTCCAAGGACCATCCCTGTAGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR GCA 90 bp | ACCAGAATTCCAAACTGCTACAGGGATGGTCCTTGGAATCCAGCTGAAAAGAGGTCAAAACTGGTTGCCTaGCATCAGACGTCTCATCTG | + |
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Preference number: 4 (lower is better) Translates to: TRIPNCYRDGPWNPAEKRSKLVA*HQTSHL Trigger: CAGATGAGACGTCTGATGGCAGGCAACCAGTTTTGA...CCTCTTTTCAGCTGGATTCCAAGGACCATCCCTGTAGCAGTTTGGAATTCTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR CCA 90 bp | CCAGAATTCCAAACTGCTACAGGGATGGTCCTTGGAATCCAGCTGAAAAGAGGCTTTCTTCTGCAACTCTaGAAAGTGTCTCCAAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: PEFQTATGMVLGIQLKRGFLLQL*KVSPSG Trigger: GCCACTTGGAGACACTTTCCAGAGTTGCAGAAGAAA...GCCTCTTTTCAGCTGGATTCCAAGGACCATCCCTGTAGCAGTTTGGAATTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR CCA 90 bp | ACCAGAATTCCAAACTGCTACAGGGATGGTCCTTGGAATCCAGCTGAAAAGAGGAGCTTGTACACTGCATaGTCCACAAAGCCGAGCAAT | + |
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Preference number: 4 (lower is better) Translates to: TRIPNCYRDGPWNPAEKRSLYTA*STKPSN Trigger: ATTGCTCGGCTTTGTGGACCATGCAGTGTACAAGCT...CCTCTTTTCAGCTGGATTCCAAGGACCATCCCTGTAGCAGTTTGGAATTCTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR GCA 90 bp | CCAGAATTCCAAACTGCTACAGGGATGGTCCTTGGAATCCAGCTGAAAAGAGGCTCTTTTGTGTCACTTTaGTGGTCGCTATCACTGTCT | + |
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Preference number: 4 (lower is better) Translates to: PEFQTATGMVLGIQLKRGSFVSL*WSLSLS Trigger: AGACAGTGATAGCGACCAGCAAAGTGACACAAAAGA...GCCTCTTTTCAGCTGGATTCCAAGGACCATCCCTGTAGCAGTTTGGAATTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR GCA 90 bp | ACTGCTACAGGGATGGTCCTTGGAATCCAGCTGAAAAGAGGCCGGTTCTCCATCTTGTCTTGGTTTCTTTaGTTTTTGGGTATTGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: TATGMVLGIQLKRGRFSILSWFL*FLGIAL Trigger: GAGAGCAATACCCAAAAAGCAAAGAAACCAAGACAA...GATGGAGAACCGGCCTCTTTTCAGCTGGATTCCAAGGACCATCCCTGTAGCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR TCA 90 bp | AGCTGCACCAGAATTCCAAACTGCTACAGGGATGGTCCTTGGAATCCAGCTGAACCAGTAGAATCCTCTTaGTCCAAGTTGTATTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: SCTRIPNCYRDGPWNPAEPVESS*SKLYSS Trigger: TGAAGAATACAACTTGGATCAAGAGGATTCTACTGG...TTCAGCTGGATTCCAAGGACCATCCCTGTAGCAGTTTGGAATTCTGGTGCAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR TCA 90 bp | TTCCAAACTGCTACAGGGATGGTCCTTGGAATCCAGCTGAAAAGAGGCCGGTTCATTCAAAGTAATCCCTaGTTGTTTCTTCTGCAACTC | + |
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Preference number: 4 (lower is better) Translates to: FQTATGMVLGIQLKRGRFIQSNP*LFLLQL Trigger: GAGTTGCAGAAGAAACAATCAGGGATTACTTTGAAT...GAACCGGCCTCTTTTCAGCTGGATTCCAAGGACCATCCCTGTAGCAGTTTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR TCA 90 bp | CCAGAATTCCAAACTGCTACAGGGATGGTCCTTGGAATCCAGCTGAAAAGAGGCAGCAACAGGACTGAATaGATAAACAAAGTGACTGTC | + |
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Preference number: 4 (lower is better) Translates to: PEFQTATGMVLGIQLKRGSNRTE*INKVTV Trigger: GACAGTCACTTTGTTTATTCATTCAGTCCTGTTGCT...GCCTCTTTTCAGCTGGATTCCAAGGACCATCCCTGTAGCAGTTTGGAATTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR GCA 90 bp | ACCAGAATTCCAAACTGCTACAGGGATGGTCCTTGGAATCCAGCTGAAAAGAGGCCTGATTGTTTCTTCTaGAACTCTGGAAAGTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: TRIPNCYRDGPWNPAEKRPDCFF*NSGKCL Trigger: GAGACACTTTCCAGAGTTGCAGAAGAAACAATCAGG...CCTCTTTTCAGCTGGATTCCAAGGACCATCCCTGTAGCAGTTTGGAATTCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR CCA 90 bp | CCAGAATTCCAAACTGCTACAGGGATGGTCCTTGGAATCCAGCTGAAAAGAGGCTTTCCTCAGATCTTCTaGACTTGTCTCTTCTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: PEFQTATGMVLGIQLKRGFPQIF*TCLFFA Trigger: TGCAAAGAAGAGACAAGTCCAGAAGATCTGAGGAAA...GCCTCTTTTCAGCTGGATTCCAAGGACCATCCCTGTAGCAGTTTGGAATTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR GCA 90 bp | ACCAGAATTCCAAACTGCTACAGGGATGGTCCTTGGAATCCAGCTGAAAAGAGGGCTTTGACAAAATGTTaGAGTCAGCTCCACATTCAA | + |
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Preference number: 4 (lower is better) Translates to: TRIPNCYRDGPWNPAEKRALTKC*SQLHIQ Trigger: TTGAATGTGGAGCTGACTGCAACATTTTGTCAAAGC...CCTCTTTTCAGCTGGATTCCAAGGACCATCCCTGTAGCAGTTTGGAATTCTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR GCA 90 bp | TTCCAAACTGCTACAGGGATGGTCCTTGGAATCCAGCTGAAAAGAGGCCGGTTCAGCACATTATTACACTaGTTTGCAAAGTACAATGCA | + |
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Preference number: 4 (lower is better) Translates to: FQTATGMVLGIQLKRGRFSTLLH*FAKYNA Trigger: TGCATTGTACTTTGCAAAGCAGTGTAATAATGTGCT...GAACCGGCCTCTTTTCAGCTGGATTCCAAGGACCATCCCTGTAGCAGTTTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR GCA 90 bp | CGTACTGTTCCACATTGTGGAAATAAACTAAGCAGAACATTGAACGTTTTCGACCCACAGCTTGTACACTaGATGGTCCACAAAGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: RTVPHCGNKLSRTLNVFDPQLVH*MVHKAE Trigger: CTCGGCTTTGTGGACCATGCAGTGTACAAGCTGTGG...GTCGAAAACGTTCAATGTTCTGCTTAGTTTATTTCCACAATGTGGAACAGTACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR GCA 90 bp | CCAGAATTCCAAACTGCTACAGGGATGGTCCTTGGAATCCAGCTGAAAAGAGGCTTTGCCCAAAAAGTTTaGATGGAAAATAAAGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: PEFQTATGMVLGIQLKRGFAQKV*MENKEE Trigger: CTCCTCTTTATTTTCCATGCAAACTTTTTGGGCAAA...GCCTCTTTTCAGCTGGATTCCAAGGACCATCCCTGTAGCAGTTTGGAATTCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR GCA 90 bp | CGTACTGTTCCACATTGTGGAAATAAACTAAGCAGAACATTGAACGTTTTCGACACAGAGCCGATGGCATaGTATTGGGAAAACAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: RTVPHCGNKLSRTLNVFDTEPMA*YWENRF Trigger: GAACCTGTTTTCCCAATAGCATGCCATCGGCTCTGT...GTCGAAAACGTTCAATGTTCTGCTTAGTTTATTTCCACAATGTGGAACAGTACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR CCA 90 bp | ATGGCACAAATATATGTAGACAAACCTGAACAGGCAGCAGGCTTAAATTTTAAGCTTCCCCACTCAGTCTaGAACTTTTCAGGGTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: MAQIYVDKPEQAAGLNFKLPHSV*NFSGFG Trigger: CCCAAACCCTGAAAAGTTCCAGACTGAGTGGGGAAG...CTTAAAATTTAAGCCTGCTGCCTGTTCAGGTTTGTCTACATATATTTGTGCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR TCA 90 bp | CGTACTGTTCCACATTGTGGAAATAAACTAAGCAGAACATTGAACGTTTTCGACGGCCAGCAACAGGACTaGATGAATAAACAAAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: RTVPHCGNKLSRTLNVFDGQQQD*MNKQSD Trigger: GTCACTTTGTTTATTCATTCAGTCCTGTTGCTGGCC...GTCGAAAACGTTCAATGTTCTGCTTAGTTTATTTCCACAATGTGGAACAGTACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR CCA 90 bp | ATGGCACAAATATATGTAGACAAACCTGAACAGGCAGCAGGCTTAAATTTTAAGGTAGTCCCGTTTTTCTaGCGCCCATTCACTTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: MAQIYVDKPEQAAGLNFKVVPFF*RPFTFA Trigger: TGCAAAAGTGAATGGGCGCCAGAAAAACGGGACTAC...CTTAAAATTTAAGCCTGCTGCCTGTTCAGGTTTGTCTACATATATTTGTGCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR TCA 90 bp | CGTACTGTTCCACATTGTGGAAATAAACTAAGCAGAACATTGAACGTTTTCGACTGCTTTCAAGCTTCTTaGTCTCTTTTGGTTCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: RTVPHCGNKLSRTLNVFDCFQAS*SLLVPQ Trigger: TTGAGGAACCAAAAGAGATCAAGAAGCTTGAAAGCA...GTCGAAAACGTTCAATGTTCTGCTTAGTTTATTTCCACAATGTGGAACAGTACG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR GCA 90 bp | GCACAAATATATGTAGACAAACCTGAACAGGCAGCAGGCTTAAATTTTAAGTTTTCAAAAATACCCTCTTaGACTGTCTCCTGTGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: AQIYVDKPEQAAGLNFKFSKIPS*TVSCAV Trigger: GACAGCACAGGAGACAGTGCAAGAGGGTATTTTTGA...AAACTTAAAATTTAAGCCTGCTGCCTGTTCAGGTTTGTCTACATATATTTGTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR GCA 90 bp | ATGGCACAAATATATGTAGACAAACCTGAACAGGCAGCAGGCTTAAATTTTAAGATTTCCTCTTTTGCATaGTTTCATGAGCGCAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: MAQIYVDKPEQAAGLNFKISSFA*FHERSL Trigger: GAGACTGCGCTCATGAAAGCATGCAAAAGAGGAAAT...CTTAAAATTTAAGCCTGCTGCCTGTTCAGGTTTGTCTACATATATTTGTGCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR GCA 90 bp | ATGGCACAAATATATGTAGACAAACCTGAACAGGCAGCAGGCTTAAATTTTAAGAACCTTGGCAAAGGGTaGTTCCGTCAACCTTATAAA | + |
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Preference number: 4 (lower is better) Translates to: MAQIYVDKPEQAAGLNFKNLGKG*FRQPYK Trigger: TTTATAAGGTTGACGGAAGCACCCTTTGCCAAGGTT...CTTAAAATTTAAGCCTGCTGCCTGTTCAGGTTTGTCTACATATATTTGTGCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR TCA 90 bp | ATGGCACAAATATATGTAGACAAACCTGAACAGGCAGCAGGCTTAAATTTTAAGCAGCAAGTTTCTTCCTaGATTCAAGAAGAACTTCCT | + |
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Preference number: 4 (lower is better) Translates to: MAQIYVDKPEQAAGLNFKQQVSS*IQEELP Trigger: AGGAAGTTCTTCTTGAATTCAGGAAGAAACTTGCTG...CTTAAAATTTAAGCCTGCTGCCTGTTCAGGTTTGTCTACATATATTTGTGCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR TCA 90 bp | GCACAAATATATGTAGACAAACCTGAACAGGCAGCAGGCTTAAATTTTAAGTTTTCACCATTGCTTTGCTaGACATTCACAAAAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: AQIYVDKPEQAAGLNFKFSPLLC*TFTKAP Trigger: TGGAGCTTTTGTGAATGTTCAGCAAAGCAATGGTGA...AAACTTAAAATTTAAGCCTGCTGCCTGTTCAGGTTTGTCTACATATATTTGTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR TCA 90 bp | GCACAAATATATGTAGACAAACCTGAACAGGCAGCAGGCTTAAATTTTAAGTTTGTTGTATTCTTCATTTaGGTTCAGTGCAACCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: AQIYVDKPEQAAGLNFKFVVFFI*VQCNLH Trigger: GTGAAGGTTGCACTGAACTCAAATGAAGAATACAAC...AAACTTAAAATTTAAGCCTGCTGCCTGTTCAGGTTTGTCTACATATATTTGTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR CCA 90 bp | GCACAAATATATGTAGACAAACCTGAACAGGCAGCAGGCTTAAATTTTAAGTTTGGTTTCTTTGCTTTTTaGGTATTGCTCTCCTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: AQIYVDKPEQAAGLNFKFGFFAF*VLLSFL Trigger: TAGAAAGGAGAGCAATACCCAAAAAGCAAAGAAACC...AAACTTAAAATTTAAGCCTGCTGCCTGTTCAGGTTTGTCTACATATATTTGTGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS GCA 90 bp | TGCACCTTTGGTGATAAGGAGTCTGAGGAGGTCGTCCTGACCGCCTaGTGCAGCCAACATCACCAGGGTCATCCCAGTAGAATCCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: CTFGDKESEEVVLTA*CSQHHQGHPSRILL Trigger: CAAGAGGATTCTACTGGGATGACCCTGGTGATGTTGGCTGCAGCAGGCGGTCAGGACGACCTCCTCAGACTCCTTATCACCAAAGGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS TCA 90 bp | GGAGGACACCAGAGCCTTCAGGCATGTTCTGAGGGGGCATGTAATTaGAATCTGTTGAGAAATCCGGCCCCTCACAGAGCCGATGGCATG | + |
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Preference number: 5 (lower is better) Translates to: GGHQSLQACSEGACN*NLLRNPAPHRADGM Trigger: CATGCCATCGGCTCTGTGAGGGGCCGGATTTCTCAACAGATTTCAATTACATGCCCCCTCAGAACATGCCTGAAGGCTCTGGTGTCCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS GCA 90 bp | ACCTTTGGTGATAAGGAGTCTGAGGAGGTCGTCCTGACCGCCTGCTaGAGCCAACATCACCAGGGTCATCCCAGTAGAATCCTCTTGATC | + |
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Preference number: 5 (lower is better) Translates to: TFGDKESEEVVLTAC*SQHHQGHPSRILLI Trigger: GATCAAGAGGATTCTACTGGGATGACCCTGGTGATGTTGGCTGCAGCAGGCGGTCAGGACGACCTCCTCAGACTCCTTATCACCAAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS TCA 90 bp | TTCACTTTTGCACCTTTGGTGATAAGGAGTCTGAGGAGGTCGTCCTaGCCGCCTGCTGCAGCCAACATCACCAGGGTCATCCCAGTAGAA | + |
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Preference number: 5 (lower is better) Translates to: FTFAPLVIRSLRRSS*PPAAANITRVIPVE Trigger: TTCTACTGGGATGACCCTGGTGATGTTGGCTGCAGCAGGCGGTCAGGACGACCTCCTCAGACTCCTTATCACCAAAGGTGCAAAAGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS GCA 90 bp | ATGAATGAGGGCTGTAGTCCCGTTTTTCTGGCGCCCATTCACTTTTaGACCTTTGGTGATAAGGAGTCTGAGGAGGTCGTCCTGACCGCC | + |
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Preference number: 5 (lower is better) Translates to: MNEGCSPVFLAPIHF*TFGDKESEEVVLTA Trigger: GGCGGTCAGGACGACCTCCTCAGACTCCTTATCACCAAAGGTGCAAAAGTGAATGGGCGCCAGAAAAACGGGACTACAGCCCTCATTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS TCA 90 bp | TGGTTGCCTGCCATCAGACGTCTCATCTGTTTGGCATACACTGTCTaGAACTTCCTGATCCCCTTCTGCAGCAATGTATGCCCAAGTGTC | + |
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Preference number: 5 (lower is better) Translates to: WLPAIRRLICLAYTV*NFLIPFCSNVCPSV Trigger: GACACTTGGGCATACATTGCTGCAGAAGGGGATCAGGAAGTTTCAGACAGTGTATGCCAAACAGATGAGACGTCTGATGGCAGGCAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR CAA 90 bp | ACTGCTACAGGGATGGTCCTTGGAATCCAGCTGAAAAGAGGCCGGTTCTCCATCCTTATAAACAACTTATaGGGGCCAGCAACAGGACTG | + |
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Preference number: 5 (lower is better) Translates to: TATGMVLGIQLKRGRFSILINNL*GPATGL Trigger: CAGTCCTGTTGCTGGCCCCAATAAGTTGTTTATAAG...GATGGAGAACCGGCCTCTTTTCAGCTGGATTCCAAGGACCATCCCTGTAGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS GCA 90 bp | TCCACTCCAGCTGCAGGTCCATACCCAAACTCAAAACTGGTTGCCTaGCATCAGACGTCTCATCTGTTTGGCATACACTGTCTGAAACTT | + |
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Preference number: 5 (lower is better) Translates to: STPAAGPYPNSKLVA*HQTSHLFGIHCLKL Trigger: AAGTTTCAGACAGTGTATGCCAAACAGATGAGACGTCTGATGGCAGGCAACCAGTTTTGAGTTTGGGTATGGACCTGCAGCTGGAGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS GCA 90 bp | TTCATCCACTCCAGCTGCAGGTCCATACCCAAACTCAAAACTGGTTaGCTGCCATCAGACGTCTCATCTGTTTGGCATACACTGTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: FIHSSCRSIPKLKTG*LPSDVSSVWHTLSE Trigger: TTCAGACAGTGTATGCCAAACAGATGAGACGTCTGATGGCAGGCAACCAGTTTTGAGTTTGGGTATGGACCTGCAGCTGGAGTGGATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR CAA 90 bp | ACTGCTACAGGGATGGTCCTTGGAATCCAGCTGAAAAGAGGCCGGTTCTCCATCACTTATGCCCTTGTCTaGGTTTCTTTGCTTTTTGGG | + |
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Preference number: 5 (lower is better) Translates to: TATGMVLGIQLKRGRFSITYALV*VSLLFG Trigger: CCCAAAAAGCAAAGAAACCAAGACAAGGGCATAAGT...GATGGAGAACCGGCCTCTTTTCAGCTGGATTCCAAGGACCATCCCTGTAGCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS TCA 90 bp | CCATCAGACGTCTCATCTGTTTGGCATACACTGTCTGAAACTTCCTaGTCCCCTTCTGCAGCAATGTATGCCCAAGTGTCAGTCTCATCT | + |
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Preference number: 5 (lower is better) Translates to: PSDVSSVWHTLSETS*SPSAAMYAQVSVSS Trigger: AGATGAGACTGACACTTGGGCATACATTGCTGCAGAAGGGGATCAGGAAGTTTCAGACAGTGTATGCCAAACAGATGAGACGTCTGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS-3UTR CAA 90 bp | CCAGAATTCCAAACTGCTACAGGGATGGTCCTTGGAATCCAGCTGAAAAGAGGCTCCGAATTTCCTCTTTaGCATGCTTTCATGAGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: PEFQTATGMVLGIQLKRGSEFPL*HAFMSA Trigger: TGCGCTCATGAAAGCATGCAAAAGAGGAAATTCGGA...GCCTCTTTTCAGCTGGATTCCAAGGACCATCCCTGTAGCAGTTTGGAATTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS-3UTR CAA 90 bp | AGCTGCACCAGAATTCCAAACTGCTACAGGGATGGTCCTTGGAATCCAGCTGAACGAGCAATAACGTCTTaGCCCAAAAAGTTTGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: SCTRIPNCYRDGPWNPAERAITS*PKKFAW Trigger: CCATGCAAACTTTTTGGGCAAAGACGTTATTGCTCG...TTCAGCTGGATTCCAAGGACCATCCCTGTAGCAGTTTGGAATTCTGGTGCAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS-3UTR CAA 90 bp | TTCCAAACTGCTACAGGGATGGTCCTTGGAATCCAGCTGAAAAGAGGCCGGTTCTCAGATCTTCTGGACTaGTCTCTTCTTTGCACTTTA | + |
|
Preference number: 5 (lower is better) Translates to: FQTATGMVLGIQLKRGRFSDLLD*SLLCTL Trigger: TAAAGTGCAAAGAAGAGACAAGTCCAGAAGATCTGA...GAACCGGCCTCTTTTCAGCTGGATTCCAAGGACCATCCCTGTAGCAGTTTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS-3UTR CAA 90 bp | ACTGCTACAGGGATGGTCCTTGGAATCCAGCTGAAAAGAGGCCGGTTCTCCATCCTGGCTTTTTCTTCTTaGTCCAAATCATACCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TATGMVLGIQLKRGRFSILAFSS*SKSYLF Trigger: GAAAAGGTATGATTTGGACAAAGAAGAAAAAGCCAG...GATGGAGAACCGGCCTCTTTTCAGCTGGATTCCAAGGACCATCCCTGTAGCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS-3UTR CAA 90 bp | AGCTGCACCAGAATTCCAAACTGCTACAGGGATGGTCCTTGGAATCCAGCTGAACCCAGTAGAATCCTCTaGATCCAAGTTGTATTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SCTRIPNCYRDGPWNPAEPSRIL*IQVVFF Trigger: GAAGAATACAACTTGGATCAAGAGGATTCTACTGGG...TTCAGCTGGATTCCAAGGACCATCCCTGTAGCAGTTTGGAATTCTGGTGCAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS-3UTR CAA 90 bp | TTCCAAACTGCTACAGGGATGGTCCTTGGAATCCAGCTGAAAAGAGGCCGGTTCCACTATTTTGGTGCTTaGACAAAATGTTGCAGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: FQTATGMVLGIQLKRGRFHYFGA*TKCCSQ Trigger: CTGACTGCAACATTTTGTCAAAGCACCAAAATAGTG...GAACCGGCCTCTTTTCAGCTGGATTCCAAGGACCATCCCTGTAGCAGTTTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS TCA 90 bp | TCACAAGGCGGACAATGTCCGAATTTCCTCTTTTGCATGCTTTCATaGGCGCAGTCTCACCATTGCTTTGCTGAACATTCACAAAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SQGGQCPNFLFCMLS*AQSHHCFAEHSQKL Trigger: GAGCTTTTGTGAATGTTCAGCAAAGCAATGGTGAGACTGCGCTCATGAAAGCATGCAAAAGAGGAAATTCGGACATTGTCCGCCTTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS TCA 90 bp | GGAAAACAGGTTCCAGTAGAGCAAGGCGAGATTCAAAGTAATCCCTaGTTGTTTCTTCTGCAACTCTGGAAAGTGTCTCCAAGTGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GKQVPVEQGEIQSNP*LFLLQLWKVSPSGS Trigger: AGAGCCACTTGGAGACACTTTCCAGAGTTGCAGAAGAAACAATCAGGGATTACTTTGAATCTCGCCTTGCTCTACTGGAACCTGTTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS-3UTR CAA 90 bp | ACCAGAATTCCAAACTGCTACAGGGATGGTCCTTGGAATCCAGCTGAAAAGAGGGTGAAATATCTTCTTTaGTGTCACTTTGCTGGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: TRIPNCYRDGPWNPAEKRVKYLL*CHFAGR Trigger: GCGACCAGCAAAGTGACACAAAAGAAGATATTTCAC...CCTCTTTTCAGCTGGATTCCAAGGACCATCCCTGTAGCAGTTTGGAATTCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS GCA 90 bp | GCTTTGCAAAGTACAATGCACTATTTTGGTGCTTTGACAAAATGTTaGAGTCAGCTCCACATTCAATCACAAGGCGGACAATGTCCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: ALQSTMHYFGALTKC*SQLHIQSQGGQCPN Trigger: ATTCGGACATTGTCCGCCTTGTGATTGAATGTGGAGCTGACTGCAACATTTTGTCAAAGCACCAAAATAGTGCATTGTACTTTGCAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS TCA 90 bp | GTATTGCTCTCCTTTCTAAAAAGGCATTCGTGCTTTCAAGCTTCTTaGTCTCTTTTGGTTCCTCAAACTTTCTTGGCTTCGTCTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VLLSFLKRHSCFQAS*SLLVPQTFLASSSS Trigger: GGAAGAAGACGAAGCCAAGAAAGTTTGAGGAACCAAAAGAGATCAAGAAGCTTGAAAGCACGAATGCCTTTTTAGAAAGGAGAGCAATAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS GCA 90 bp | GTCATCCAGATGTTTCTCAAAAATACCCTCTTGCACTGTCTCCTGTaGTGTCTTATCTCTTACACTTCTCACATTCTGATTCTCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VIQMFLKNTLLHCLL*CLISYTSHILILFS Trigger: AGAGAAGAGAATCAGAATGTGAGAAGTGTAAGAGATAAGACAGCACAGGAGACAGTGCAAGAGGGTATTTTTGAGAAACATCTGGATGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS GCA 90 bp | GGGCAAACACAGGTGATGGTAGCTTATTTAACTCTAGGTTACTTATaGCCTTGTCTTGGTTTCTTTGCTTTTTGGGTATTGCTCTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GQTQVMVAYLTLGYL*PCLGFFAFWVLLSF Trigger: AAAGGAGAGCAATACCCAAAAAGCAAAGAAACCAAGACAAGGGCATAAGTAACCTAGAGTTAAATAAGCTACCATCACCTGTGTTTGCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS-3UTR CAA 90 bp | GCACAAATATATGTAGACAAACCTGAACAGGCAGCAGGCTTAAATTTTAAGTTTCTCAAAAATACCCTCTaGCACTGTCTCCTGTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AQIYVDKPEQAAGLNFKFLKNTL*HCLLCC Trigger: ACAGCACAGGAGACAGTGCAAGAGGGTATTTTTGAG...AAACTTAAAATTTAAGCCTGCTGCCTGTTCAGGTTTGTCTACATATATTTGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS-3UTR CAA 90 bp | CGTACTGTTCCACATTGTGGAAATAAACTAAGCAGAACATTGAACGTTTTCGACTGCTTTGACAAAATGTaGCAGTCAGCTCCACATTCA | + |
|
Preference number: 5 (lower is better) Translates to: RTVPHCGNKLSRTLNVFDCFDKM*QSAPHS Trigger: TGAATGTGGAGCTGACTGCAACATTTTGTCAAAGCA...GTCGAAAACGTTCAATGTTCTGCTTAGTTTATTTCCACAATGTGGAACAGTACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS TCA 90 bp | GGTCATCCCAGTAGAATCCTCTTGATCCAAGTTGTATTCTTCATTTaGGTTCAGTGCAACCTTCACAGCAATATAATCTCCATTTTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: GHPSRILLIQVVFFI*VQCNLHSNIISIFH Trigger: GTGAAAAATGGAGATTATATTGCTGTGAAGGTTGCACTGAACTCAAATGAAGAATACAACTTGGATCAAGAGGATTCTACTGGGATGACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS-3UTR CAA 90 bp | CGTACTGTTCCACATTGTGGAAATAAACTAAGCAGAACATTGAACGTTTTCGACCTTGTCTTGGTTTCTTaGCTTTTTGGGTATTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RTVPHCGNKLSRTLNVFDLVLVS*LFGYCS Trigger: AGAGCAATACCCAAAAAGCAAAGAAACCAAGACAAG...GTCGAAAACGTTCAATGTTCTGCTTAGTTTATTTCCACAATGTGGAACAGTACG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS GCA 90 bp | AGCTTATTTAACTCTAGGTTACTTATGCCCTTGTCTTGGTTTCTTTaGTTTTTGGGTATTGCTCTCCTTTCTAAAAAGGCATTCGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SLFNSRLLMPLSWFL*FLGIALLSKKAFVL Trigger: AAGCACGAATGCCTTTTTAGAAAGGAGAGCAATACCCAAAAAGCAAAGAAACCAAGACAAGGGCATAAGTAACCTAGAGTTAAATAAGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS-3UTR CAA 90 bp | GCACAAATATATGTAGACAAACCTGAACAGGCAGCAGGCTTAAATTTTAAGTTTGTGCTTTCAAGCTTCTaGATCTCTTTTGGTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AQIYVDKPEQAAGLNFKFVLSSF*ISFGSS Trigger: TGAGGAACCAAAAGAGATCAAGAAGCTTGAAAGCAC...AAACTTAAAATTTAAGCCTGCTGCCTGTTCAGGTTTGTCTACATATATTTGTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS-3UTR CAA 90 bp | ATGGCACAAATATATGTAGACAAACCTGAACAGGCAGCAGGCTTAAATTTTAAGAGGTTACTTATGCCCTaGTCTTGGTTTCTTTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: MAQIYVDKPEQAAGLNFKRLLMP*SWFLCF Trigger: AAAGCAAAGAAACCAAGACAAGGGCATAAGTAACCT...CTTAAAATTTAAGCCTGCTGCCTGTTCAGGTTTGTCTACATATATTTGTGCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS-3UTR CAA 90 bp | GCACAAATATATGTAGACAAACCTGAACAGGCAGCAGGCTTAAATTTTAAGTTTTCCTTTTTGGGCTTTTaGGAGTCCTTTAATTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AQIYVDKPEQAAGLNFKFSFLGF*ESFNSS Trigger: GGAAGAATTAAAGGACTCCAAAAAGCCCAAAAAGGA...AAACTTAAAATTTAAGCCTGCTGCCTGTTCAGGTTTGTCTACATATATTTGTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS-3UTR CAA 90 bp | GCACAAATATATGTAGACAAACCTGAACAGGCAGCAGGCTTAAATTTTAAGTTTTTTGCTTTTTGGGTATaGCTCTCCTTTCTAAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: AQIYVDKPEQAAGLNFKFFAFWV*LSFLKR Trigger: CCTTTTTAGAAAGGAGAGCAATACCCAAAAAGCAAA...AAACTTAAAATTTAAGCCTGCTGCCTGTTCAGGTTTGTCTACATATATTTGTGC 36% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS TCA 72 bp | GCACCTTTGGTGATAAGGAGTCTGAGGAGGTCGTCCTaGCCGCCTGCTGCAGCCAACATCACCAGGGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: APLVIRSLRRSS*PPAAANITRVI Trigger: GATGACCCTGGTGATGTTGGCTGCAGCAGGCGGTCAGGACGACCTCCTCAGACTCCTTATCACCAAAGGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS GCA 72 bp | GGTGATAAGGAGTCTGAGGAGGTCGTCCTGACCGCCTaGTGCAGCCAACATCACCAGGGTCATCCCAGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: GDKESEEVVLTA*CSQHHQGHPSR Trigger: TCTACTGGGATGACCCTGGTGATGTTGGCTGCAGCAGGCGGTCAGGACGACCTCCTCAGACTCCTTATCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS GCA 72 bp | GATAAGGAGTCTGAGGAGGTCGTCCTGACCGCCTGCTaGAGCCAACATCACCAGGGTCATCCCAGTAGAATC | + |
|
Preference number: 6 (lower is better) Translates to: DKESEEVVLTAC*SQHHQGHPSRI Trigger: GATTCTACTGGGATGACCCTGGTGATGTTGGCTGCAGCAGGCGGTCAGGACGACCTCCTCAGACTCCTTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS TCA 72 bp | CAGAGCCTTCAGGCATGTTCTGAGGGGGCATGTAATTaGAATCTGTTGAGAAATCCGGCCCCTCACAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: QSLQACSEGACN*NLLRNPAPHRA Trigger: GGCTCTGTGAGGGGCCGGATTTCTCAACAGATTTCAATTACATGCCCCCTCAGAACATGCCTGAAGGCTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS GCA 72 bp | GGCTGTAGTCCCGTTTTTCTGGCGCCCATTCACTTTTaGACCTTTGGTGATAAGGAGTCTGAGGAGGTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: GCSPVFLAPIHF*TFGDKESEEVV Trigger: GACGACCTCCTCAGACTCCTTATCACCAAAGGTGCAAAAGTGAATGGGCGCCAGAAAAACGGGACTACAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS CCA 72 bp | CCACTCCAGCTGCAGGTCCATACCCAAACTCAAAACTaGTTGCCTGCCATCAGACGTCTCATCTGTTTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PLQLQVHTQTQN*LPAIRRLICLA Trigger: TGCCAAACAGATGAGACGTCTGATGGCAGGCAACCAGTTTTGAGTTTGGGTATGGACCTGCAGCTGGAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS CAA 72 bp | AGAAATCCGGCCCCTCACAGAGCCGATGGCATGCTATaGGGAAAACAGGTTCCAGTAGAGCAAGGCGAGATT | + |
|
Preference number: 6 (lower is better) Translates to: RNPAPHRADGML*GKQVPVEQGEI Trigger: AATCTCGCCTTGCTCTACTGGAACCTGTTTTCCCAATAGCATGCCATCGGCTCTGTGAGGGGCCGGATTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS GCA 72 bp | TCCAGCTGCAGGTCCATACCCAAACTCAAAACTGGTTaGCTGCCATCAGACGTCTCATCTGTTTGGCATACA | + |
|
Preference number: 6 (lower is better) Translates to: SSCRSIPKLKTG*LPSDVSSVWHT Trigger: TGTATGCCAAACAGATGAGACGTCTGATGGCAGGCAACCAGTTTTGAGTTTGGGTATGGACCTGCAGCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS CCA 72 bp | AAATCTGTTGAGAAATCCGGCCCCTCACAGAGCCGATaGCATGCTATTGGGAAAACAGGTTCCAGTAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: KSVEKSGPSQSR*HAIGKTGSSRA Trigger: TGCTCTACTGGAACCTGTTTTCCCAATAGCATGCCATCGGCTCTGTGAGGGGCCGGATTTCTCAACAGATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS TCA 72 bp | GCCATCAGACGTCTCATCTGTTTGGCATACACTGTCTaGAACTTCCTGATCCCCTTCTGCAGCAATGTATGC | + |
|
Preference number: 6 (lower is better) Translates to: AIRRLICLAYTV*NFLIPFCSNVC Trigger: GCATACATTGCTGCAGAAGGGGATCAGGAAGTTTCAGACAGTGTATGCCAAACAGATGAGACGTCTGATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS CAA 90 bp | AATCTGTTGAGAAATCCGGCCCCTCACAGAGCCGATGGCATGCTATaGGGAAAACAGGTTCCAGTAGAGCAAGGCGAGATTCAAAGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: NLLRNPAPHRADGML*GKQVPVEQGEIQSN Trigger: ATTACTTTGAATCTCGCCTTGCTCTACTGGAACCTGTTTTCCCAATAGCATGCCATCGGCTCTGTGAGGGGCCGGATTTCTCAACAGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS TCA 72 bp | GTCTCATCTGTTTGGCATACACTGTCTGAAACTTCCTaGTCCCCTTCTGCAGCAATGTATGCCCAAGTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: VSSVWHTLSETS*SPSAAMYAQVS Trigger: TGACACTTGGGCATACATTGCTGCAGAAGGGGATCAGGAAGTTTCAGACAGTGTATGCCAAACAGATGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS TCA 72 bp | ATAGCTACAGTTGTTAAAAAGTTCTTCTCAGCGGCATaGATGAGGGCTGTAGTCCCGTTTTTCTGGCGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: IATVVKKFFSAA*MRAVVPFFWRP Trigger: TGGGCGCCAGAAAAACGGGACTACAGCCCTCATTCATGCCGCTGAGAAGAACTTTTTAACAACTGTAGCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS CAA 90 bp | ACAGCTTGTACACTGCATGGTCCACAAAGCCGAGCAATAACGTCTTaGCCCAAAAAGTTTGCATGGAAAATAAAGAGGAGGACACCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: TACTLHGPQSRAITS*PKKFAWKIKRRTPE Trigger: CTCTGGTGTCCTCCTCTTTATTTTCCATGCAAACTTTTTGGGCAAAGACGTTATTGCTCGGCTTTGTGGACCATGCAGTGTACAAGCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS TCA 72 bp | GGACAATGTCCGAATTTCCTCTTTTGCATGCTTTCATaGGCGCAGTCTCACCATTGCTTTGCTGAACATTCA | + |
|
Preference number: 6 (lower is better) Translates to: GQCPNFLFCMLS*AQSHHCFAEHS Trigger: TGAATGTTCAGCAAAGCAATGGTGAGACTGCGCTCATGAAAGCATGCAAAAGAGGAAATTCGGACATTGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS TCA 72 bp | GTTCCAGTAGAGCAAGGCGAGATTCAAAGTAATCCCTaGTTGTTTCTTCTGCAACTCTGGAAAGTGTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VPVEQGEIQSNP*LFLLQLWKVSP Trigger: TGGAGACACTTTCCAGAGTTGCAGAAGAAACAATCAGGGATTACTTTGAATCTCGCCTTGCTCTACTGGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS GCA 72 bp | AAGGCGAGATTCAAAGTAATCCCTGATTGTTTCTTCTaGAACTCTGGAAAGTGTCTCCAAGTGGCTCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: KARFKVIPDCFF*NSGKCLQVALQ Trigger: CTGAAGAGCCACTTGGAGACACTTTCCAGAGTTGCAGAAGAAACAATCAGGGATTACTTTGAATCTCGCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS CCA 72 bp | TTCTCTTCCCCACTCAGTCTGGAACTTTTCAGGGTTTaGGCAAACACAGGTGATGGTAGCTTATTTAACTCT | + |
|
Preference number: 6 (lower is better) Translates to: FSSPLSLELFRV*ANTGDGSLFNS Trigger: AGAGTTAAATAAGCTACCATCACCTGTGTTTGCCCAAACCCTGAAAAGTTCCAGACTGAGTGGGGAAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS TCA 72 bp | CATGCTTTCATGAGCGCAGTCTCACCATTGCTTTGCTaGACATTCACAAAAGCTCCAGCTTCCAAAAGAATA | + |
|
Preference number: 6 (lower is better) Translates to: HAFMSAVSPLLC*TFTKAPASKRI Trigger: TATTCTTTTGGAAGCTGGAGCTTTTGTGAATGTTCAGCAAAGCAATGGTGAGACTGCGCTCATGAAAGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS CAA 90 bp | TGCTTTGCAAAGTACAATGCACTATTTTGGTGCTTTGACAAAATGTaGCAGTCAGCTCCACATTCAATCACAAGGCGGACAATGTCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: CFAKYNALFWCFDKM*QSAPHSITRRTMSE Trigger: TTCGGACATTGTCCGCCTTGTGATTGAATGTGGAGCTGACTGCAACATTTTGTCAAAGCACCAAAATAGTGCATTGTACTTTGCAAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS GCA 72 bp | AGTACAATGCACTATTTTGGTGCTTTGACAAAATGTTaGAGTCAGCTCCACATTCAATCACAAGGCGGACAA | + |
|
Preference number: 6 (lower is better) Translates to: STMHYFGALTKC*SQLHIQSQGGQ Trigger: TTGTCCGCCTTGTGATTGAATGTGGAGCTGACTGCAACATTTTGTCAAAGCACCAAAATAGTGCATTGTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS CAA 72 bp | AAGTACAATGCACTATTTTGGTGCTTTGACAAAATGTaGCAGTCAGCTCCACATTCAATCACAAGGCGGACA | + |
|
Preference number: 6 (lower is better) Translates to: KYNALFWCFDKM*QSAPHSITRRT Trigger: TGTCCGCCTTGTGATTGAATGTGGAGCTGACTGCAACATTTTGTCAAAGCACCAAAATAGTGCATTGTACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS CAA 90 bp | CATTATTACACTGCTTTGCAAAGTACAATGCACTATTTTGGTGCTTaGACAAAATGTTGCAGTCAGCTCCACATTCAATCACAAGGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: HYYTALQSTMHYFGA*TKCCSQLHIQSQGG Trigger: TCCGCCTTGTGATTGAATGTGGAGCTGACTGCAACATTTTGTCAAAGCACCAAAATAGTGCATTGTACTTTGCAAAGCAGTGTAATAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS TCA 72 bp | TCCTTTCTAAAAAGGCATTCGTGCTTTCAAGCTTCTTaGTCTCTTTTGGTTCCTCAAACTTTCTTGGCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: SFLKRHSCFQAS*SLLVPQTFLAS Trigger: CGAAGCCAAGAAAGTTTGAGGAACCAAAAGAGATCAAGAAGCTTGAAAGCACGAATGCCTTTTTAGAAAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS CAA 72 bp | TATAAGGTCATCCAGATGTTTCTCAAAAATACCCTCTaGCACTGTCTCCTGTGCTGTCTTATCTCTTACACT | + |
|
Preference number: 6 (lower is better) Translates to: YKVIQMFLKNTL*HCLLCCLISYT Trigger: AGTGTAAGAGATAAGACAGCACAGGAGACAGTGCAAGAGGGTATTTTTGAGAAACATCTGGATGACCTTATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS CAA 72 bp | CTCCTTTCTAAAAAGGCATTCGTGCTTTCAAGCTTCTaGATCTCTTTTGGTTCCTCAAACTTTCTTGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LLSKKAFVLSSF*ISFGSSNFLGF Trigger: GAAGCCAAGAAAGTTTGAGGAACCAAAAGAGATCAAGAAGCTTGAAAGCACGAATGCCTTTTTAGAAAGGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
||
| CDS GCA 72 bp | AACTCTAGGTTACTTATGCCCTTGTCTTGGTTTCTTTaGTTTTTGGGTATTGCTCTCCTTTCTAAAAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: NSRLLMPLSWFL*FLGIALLSKKA Trigger: TGCCTTTTTAGAAAGGAGAGCAATACCCAAAAAGCAAAGAAACCAAGACAAGGGCATAAGTAACCTAGAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS GCA 72 bp | CAGGTGATGGTAGCTTATTTAACTCTAGGTTACTTATaGCCTTGTCTTGGTTTCTTTGCTTTTTGGGTATTG | + |
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Preference number: 6 (lower is better) Translates to: QVMVAYLTLGYL*PCLGFFAFWVL Trigger: CAATACCCAAAAAGCAAAGAAACCAAGACAAGGGCATAAGTAACCTAGAGTTAAATAAGCTACCATCACCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS CAA 72 bp | ACTGCTTTGCAAAGTACAATGCACTATTTTGGTGCTTaGACAAAATGTTGCAGTCAGCTCCACATTCAATCA | + |
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Preference number: 6 (lower is better) Translates to: TALQSTMHYFGA*TKCCSQLHIQS Trigger: TGATTGAATGTGGAGCTGACTGCAACATTTTGTCAAAGCACCAAAATAGTGCATTGTACTTTGCAAAGCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS CAA 90 bp | TTCAATACTTATAAGGTCATCCAGATGTTTCTCAAAAATACCCTCTaGCACTGTCTCCTGTGCTGTCTTATCTCTTACACTTCTCACATT | + |
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Preference number: 6 (lower is better) Translates to: FNTYKVIQMFLKNTL*HCLLCCLISYTSHI Trigger: AATGTGAGAAGTGTAAGAGATAAGACAGCACAGGAGACAGTGCAAGAGGGTATTTTTGAGAAACATCTGGATGACCTTATAAGTATTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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| CDS TCA 72 bp | AGTAGAATCCTCTTGATCCAAGTTGTATTCTTCATTTaGGTTCAGTGCAACCTTCACAGCAATATAATCTCC | + |
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Preference number: 6 (lower is better) Translates to: SRILLIQVVFFI*VQCNLHSNIIS Trigger: GGAGATTATATTGCTGTGAAGGTTGCACTGAACTCAAATGAAGAATACAACTTGGATCAAGAGGATTCTACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116468.2 |
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