Pregenerated sensors for MPHOSPH6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031843Ensembl transcript IDs: ENSMUST00000034303.3
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CAGCACATCTCCAAACTTATGCATTTCTTTAGAGGGAAACGGTGCTTTAACCAGGTTCCGACCATGCTGTaGTCACAGCCATCCCCTGTA | + |
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Preference number: 2 (lower is better) Translates to: QHISKLMHFFRGKRCFNQVPTML*SQPSPV Trigger: TACAGGGGATGGCTGTGAGCACAGCATGGTCGGAAC...CTGGTTAAAGCACCGTTTCCCTCTAAAGAAATGCATAAGTTTGGAGATGTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034303.3 |
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| 3UTR-3UTR CCA 90 bp | CCGAGAGCCATGTCTGTTCCTGACAAATCACTTCTGGAAAGTTCTCAAAGATGTCATGTGGCCTGTCTGTaGGTATATACACACAGAATC | + |
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Preference number: 2 (lower is better) Translates to: PRAMSVPDKSLLESSQRCHVACL*VYTHRI Trigger: GATTCTGTGTGTATATACCCACAGACAGGCCACATG...ACATCTTTGAGAACTTTCCAGAAGTGATTTGTCAGGAACAGACATGGCTCTCGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034303.3 |
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| 3UTR-3UTR CCA 90 bp | GCCATGTCTGTTCCTGACAAATCACTTCTGGAAAGTTCTCAAAGATGTGACTCCTACAATTGTCATTCCTaGACAGTAACTGGAGAACGG | + |
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Preference number: 2 (lower is better) Translates to: AMSVPDKSLLESSQRCDSYNCHS*TVTGER Trigger: CCGTTCTCCAGTTACTGTCCAGGAATGACAATTGTA...GGAGTCACATCTTTGAGAACTTTCCAGAAGTGATTTGTCAGGAACAGACATGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034303.3 |
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| 3UTR GCA 72 bp | CAATTGTCATTCCTGGACAGTAACTGGAGAACGGTGTaGATGTGGCCTGTCTGTGGGTATATACACACAGAA | + |
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Preference number: 3 (lower is better) Translates to: QLSFLDSNWRTV*MWPVCGYIHTE Trigger: TTCTGTGTGTATATACCCACAGACAGGCCACATGCACACCGTTCTCCAGTTACTGTCCAGGAATGACAATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034303.3 |
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| 3UTR GCA 72 bp | ATCTCCAAACTTATGCATTTCTTTAGAGGGAAACGGTaGTTTAACCAGTACCGACGACAGGAGGATGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: ISKLMHFFRGKR*FNQYRRQEDEF Trigger: GAACTCATCCTCCTGTCGTCGGTACTGGTTAAAGCACCGTTTCCCTCTAAAGAAATGCATAAGTTTGGAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034303.3 |
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| 3UTR CCA 72 bp | ATAATTAGTTTACAATTGTCATTCCTGGACAGTAACTaGAGAACGGTGTGCATGTGGCCTGTCTGTGGGTAT | + |
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Preference number: 3 (lower is better) Translates to: IISLQLSFLDSN*RTVCMWPVCGY Trigger: ATACCCACAGACAGGCCACATGCACACCGTTCTCCAGTTACTGTCCAGGAATGACAATTGTAAACTAATTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034303.3 |
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| CDS-3UTR TCA 90 bp | GGAGCGGCCTGTGCCCACATATCTGAAGCCCCTGAGAATGTCATAAAAAGGATGCCAGGCCTCTTTGCATaGACTTCATGCGCAGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: GAACAHISEAPENVIKRMPGLFA*TSCAAG Trigger: ACCTGCTGCGCATGAAGTTCATGCAAAGAGGCCTGG...CATCCTTTTTATGACATTCTCAGGGGCTTCAGATATGTGGGCACAGGCCGCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034303.3 |
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| CDS-3UTR GCA 90 bp | GGGTATATACACACAGAATCAGGTCAAAAATCTAGGGAGCGGCCTGTGCCCACAGAGTCCAGGCCTCTTTaGATGAACTTCATGCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GYIHTESGQKSRERPVPTESRPL*MNFMRS Trigger: GCTGCGCATGAAGTTCATGCAAAGAGGCCTGGACTC...TGTGGGCACAGGCCGCTCCCTAGATTTTTGACCTGATTCTGTGTGTATATACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034303.3 |
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| CDS-3UTR TCA 90 bp | AGTTTACAATTGTCATTCCTGGACAGTAACTGGAGAACGGTGTGCATGTGGCCTTCTGCTCCTCTACGATaGAGCTCTCCTTCTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: SLQLSFLDSNWRTVCMWPSAPLR*SSPSPS Trigger: TGAAGGAGAAGGAGAGCTTCATCGTAGAGGAGCAGA...AGGCCACATGCACACCGTTCTCCAGTTACTGTCCAGGAATGACAATTGTAAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034303.3 |
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| CDS-3UTR GCA 90 bp | CCATGTCTGTTCCTGACAAATCACTTCTGGAAAGTTCTCAAAGATGTGACTCCACGTCTCGTCTTCCTCTaGTGCCTCTGCTCGGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: PCLFLTNHFWKVLKDVTPRLVFL*CLCSVL Trigger: AAGAACCGAGCAGAGGCAGCAGAGGAAGACGAGACG...TGGAGTCACATCTTTGAGAACTTTCCAGAAGTGATTTGTCAGGAACAGACATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034303.3 |
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| CDS-3UTR CCA 90 bp | GCCCGAGAGCCATGTCTGTTCCTGACAAATCACTTCTGGAAAGTTCTCAAAGATCTTCTAGCTGTTTCTTaGTTTCCGAGTCCAGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: AREPCLFLTNHFWKVLKDLLAVS*FPSPGL Trigger: GAGGCCTGGACTCGGAAACCAAGAAACAGCTAGAAG...ATCTTTGAGAACTTTCCAGAAGTGATTTGTCAGGAACAGACATGGCTCTCGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034303.3 |
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| CDS-3UTR GCA 90 bp | TTACACATCTGTCTCAAGAACAGCACATCTCCAAACTTATGCATTTCTTTAGAGAGTCTCATATCTTCTTaGCATTTCCTCATCAGACAC | + |
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Preference number: 4 (lower is better) Translates to: LHICLKNSTSPNLCISLESLISS*HFLIRH Trigger: GTGTCTGATGAGGAAATGGCAAGAAGATATGAGACT...CTCTAAAGAAATGCATAAGTTTGGAGATGTGCTGTTCTTGAGACAGATGTGTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034303.3 |
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| CDS GCA 90 bp | ATGAAGCTCTCCTTCTCCTTCAACTCCGGCAAATCCAGGTACCAGTaGTCGTCGCTGATCATCTTCCGCTCCTCCTCTTCTAGCTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: MKLSFSFNSGKSRYQ*SSLIIFRSSSSSCF Trigger: GAAACAGCTAGAAGAGGAGGAGCGGAAGATGATCAGCGACGAGCACTGGTACCTGGATTTGCCGGAGTTGAAGGAGAAGGAGAGCTTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034303.3 |
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| CDS TCA 90 bp | CGTAGAGAAGATCTTCACACAGGGAGAAGCTCTGCTCCTCTACGATaGAGCTCTCCTTCTCCTTCAACTCCGGCAAATCCAGGTACCAGT | + |
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Preference number: 5 (lower is better) Translates to: RREDLHTGRSSAPLR*SSPSPSTPANPGTS Trigger: ACTGGTACCTGGATTTGCCGGAGTTGAAGGAGAAGGAGAGCTTCATCGTAGAGGAGCAGAGCTTCTCCCTGTGTGAAGATCTTCTCTACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034303.3 |
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| CDS-3UTR CAA 90 bp | CCTGTCTGTGGGTATATACACACAGAATCAGGTCAAAAATCTAGGGAGCGGCCTTCTTCTAGCTGTTTCTaGGTTTCCGAGTCCAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: PVCGYIHTESGQKSRERPSSSCF*VSESRP Trigger: AGGCCTGGACTCGGAAACCAAGAAACAGCTAGAAGA...AGGCCGCTCCCTAGATTTTTGACCTGATTCTGTGTGTATATACCCACAGACAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034303.3 |
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| CDS-3UTR CAA 90 bp | CCATGTCTGTTCCTGACAAATCACTTCTGGAAAGTTCTCAAAGATGTGACTCCACGAGTCCAGGCCTCTTaGCATGAACTTCATGCGCAG | + |
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Preference number: 5 (lower is better) Translates to: PCLFLTNHFWKVLKDVTPRVQAS*HELHAQ Trigger: CTGCGCATGAAGTTCATGCAAAGAGGCCTGGACTCG...TGGAGTCACATCTTTGAGAACTTTCCAGAAGTGATTTGTCAGGAACAGACATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034303.3 |
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| CDS-3UTR CAA 90 bp | CAGCACATCTCCAAACTTATGCATTTCTTTAGAGGGAAACGGTGCTTTAACCAGATGCGCAGCAGGTTCTaGGATAACTTAGTCTTGCGC | + |
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Preference number: 5 (lower is better) Translates to: QHISKLMHFFRGKRCFNQMRSRF*DNLVLR Trigger: GCGCAAGACTAAGTTATCCAAGAACCTGCTGCGCAT...CTGGTTAAAGCACCGTTTCCCTCTAAAGAAATGCATAAGTTTGGAGATGTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034303.3 |
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| CDS-3UTR CAA 90 bp | AAAGGCCCGAGAGCCATGTCTGTTCCTGACAAATCACTTCTGGAAAGTTCTCAAAAGTCTCATATCTTCTaGCCATTTCCTCATCAGACA | + |
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Preference number: 5 (lower is better) Translates to: KGPRAMSVPDKSLLESSQKSHIF*PFPHQT Trigger: TGTCTGATGAGGAAATGGCAAGAAGATATGAGACTT...TTGAGAACTTTCCAGAAGTGATTTGTCAGGAACAGACATGGCTCTCGGGCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034303.3 |
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| CDS GCA 72 bp | TCCTTCTCCTTCAACTCCGGCAAATCCAGGTACCAGTaGTCGTCGCTGATCATCTTCCGCTCCTCCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SFSFNSGKSRYQ*SSLIIFRSSSS Trigger: AGAAGAGGAGGAGCGGAAGATGATCAGCGACGAGCACTGGTACCTGGATTTGCCGGAGTTGAAGGAGAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034303.3 |
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| CDS TCA 72 bp | GATCTTCACACAGGGAGAAGCTCTGCTCCTCTACGATaGAGCTCTCCTTCTCCTTCAACTCCGGCAAATCCA | + |
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Preference number: 6 (lower is better) Translates to: DLHTGRSSAPLR*SSPSPSTPANP Trigger: TGGATTTGCCGGAGTTGAAGGAGAAGGAGAGCTTCATCGTAGAGGAGCAGAGCTTCTCCCTGTGTGAAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034303.3 |
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| CDS GCA 72 bp | AGACACATCGACCTCTACCGTCTCGTCTTCCTCTGCTaGCTCTGCTCGGTTCTTAGAATTCATCTGAAGCAT | + |
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Preference number: 6 (lower is better) Translates to: RHIDLYRLVFLC*LCSVLRIHLKH Trigger: ATGCTTCAGATGAATTCTAAGAACCGAGCAGAGGCAGCAGAGGAAGACGAGACGGTAGAGGTCGATGTGTCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034303.3 |
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| CDS GCA 72 bp | ATCAGACACATCGACCTCTACCGTCTCGTCTTCCTCTaGTGCCTCTGCTCGGTTCTTAGAATTCATCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: IRHIDLYRLVFL*CLCSVLRIHLK Trigger: CTTCAGATGAATTCTAAGAACCGAGCAGAGGCAGCAGAGGAAGACGAGACGGTAGAGGTCGATGTGTCTGAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034303.3 |
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