Pregenerated sensors for MPG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020287Ensembl transcript IDs: ENSMUST00000020528.14, ENSMUST00000138050.2, ENSMUST00000142964.8
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGCTTCTGTGTCCACTCCCCTGCATGACCAATACCTATACGGGCTaGTGCCACCACCACAGCTGGGCTACTGGACTCCAGAGGGCCATG | + |
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Preference number: 1 (lower is better) Translates to: GLLCPLPCMTNTYTG*CHHHSWATGLQRAM Trigger: CATGGCCCTCTGGAGTCCAGTAGCCCAGCTGTGGTGGTGGCAGCAGCCCGTATAGGTATTGGTCATGCAGGGGAGTGGACACAGAAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142964.8 |
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| 3UTR GCA 90 bp | TTGAGGGAACGGCCGACAGTGCTTTTTCGGAGGGAGTTACGAAGCTaGCGCATGGTCTCCAGGCCCTCCAGGGGCTCTAGTGCTCTTAGC | + |
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Preference number: 1 (lower is better) Translates to: LRERPTVLFRRELRS*RMVSRPSRGSSALS Trigger: GCTAAGAGCACTAGAGCCCCTGGAGGGCCTGGAGACCATGCGGCAGCTTCGTAACTCCCTCCGAAAAAGCACTGTCGGCCGTTCCCTCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142964.8 |
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| 3UTR GCA 90 bp | GCTGCCCTGGACATAGAAGCGCAAGGGCTTCTGTGTCCACTCCCCTaGATGACCAATACCTATACGGGCTGCTGCCACCACCACAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: AALDIEAQGLLCPLP*MTNTYTGCCHHHSW Trigger: CCAGCTGTGGTGGTGGCAGCAGCCCGTATAGGTATTGGTCATGCAGGGGAGTGGACACAGAAGCCCTTGCGCTTCTATGTCCAGGGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142964.8 |
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| 3UTR TCA 90 bp | GGGCCTGGCACAGCTTGGAGGGACCACTACAGAGTTCACGGTCCTTaGGGGAACGGCCGACAGTGCTTTTTCGGAGGGAGTTACGAAGCT | + |
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Preference number: 1 (lower is better) Translates to: GPGTAWRDHYRVHGP*GNGRQCFFGGSYEA Trigger: AGCTTCGTAACTCCCTCCGAAAAAGCACTGTCGGCCGTTCCCTCAAGGACCGTGAACTCTGTAGTGGTCCCTCCAAGCTGTGCCAGGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142964.8 |
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| 3UTR CCA 90 bp | AACGGCCGACAGTGCTTTTTCGGAGGGAGTTACGAAGCTGCCGCATaGTCTCCAGGCCCTCCAGGGGCTCTAGTGCTCTTAGCAAGACAC | + |
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Preference number: 1 (lower is better) Translates to: NGRQCFFGGSYEAAA*SPGPPGALVLLARH Trigger: GTGTCTTGCTAAGAGCACTAGAGCCCCTGGAGGGCCTGGAGACCATGCGGCAGCTTCGTAACTCCCTCCGAAAAAGCACTGTCGGCCGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142964.8 |
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| 3UTR GCA 90 bp | GAGCAGCTTCATCTTCTGGCCCCAAGTATGCCTCAGTCTCCACAATaGGCCCACGGAGTTCTGTTCCATCAGCGAGTCGCCGGACAAGAA | + |
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Preference number: 1 (lower is better) Translates to: EQLHLLAPSMPQSPQ*AHGVLFHQRVAGQE Trigger: TTCTTGTCCGGCGACTCGCTGATGGAACAGAACTCCGTGGGCGCATTGTGGAGACTGAGGCATACTTGGGGCCAGAAGATGAAGCTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
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| 3UTR CCA 90 bp | AGGCTGATCCATCTGTTCAGCCACTCTGTCTACCACACTGACCCATaGGCTGCCCTGGACATAGAAGCGCAAGGGCTTCTGTGTCCACTC | + |
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Preference number: 1 (lower is better) Translates to: RLIHLFSHSVYHTDP*AALDIEAQGLLCPL Trigger: GAGTGGACACAGAAGCCCTTGCGCTTCTATGTCCAGGGCAGCCCATGGGTCAGTGTGGTAGACAGAGTGGCTGAACAGATGGATCAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142964.8 |
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| 3UTR TCA 90 bp | GAGGTCAGAAGAAAGCATGCCTTGGAGCTAGAGTTACAGAGGTTGTaGGCCATTGGGTGTGGGGCTGGGAACAGCAGAAGAGCAGGAAGC | + |
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Preference number: 1 (lower is better) Translates to: EVRRKHALELELQRL*AIGCGAGNSRRAGS Trigger: GCTTCCTGCTCTTCTGCTGTTCCCAGCCCCACACCCAATGGCTCACAACCTCTGTAACTCTAGCTCCAAGGCATGCTTTCTTCTGACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| 3UTR TCA 90 bp | ATGCTCTGCTCTGTTTGGACTTTCAGTCCTCATCTTCCCACGTCCTaGGCACCCACACCTGGCCTGTCCATGACATCCATGTCCTTAGCC | + |
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Preference number: 1 (lower is better) Translates to: MLCSVWTFSPHLPTS*APTPGLSMTSMSLA Trigger: GGCTAAGGACATGGATGTCATGGACAGGCCAGGTGTGGGTGCTCAGGACGTGGGAAGATGAGGACTGAAAGTCCAAACAGAGCAGAGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
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| 3UTR CCA 90 bp | TTGGACTTTCAGTCCTCATCTTCCCACGTCCTGAGCACCCACACCTaGCCTGTCCATGACATCCATGTCCTTAGCCTCTACTCAACATGG | + |
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Preference number: 1 (lower is better) Translates to: LDFQSSSSHVLSTHT*PVHDIHVLSLYSTW Trigger: CCATGTTGAGTAGAGGCTAAGGACATGGATGTCATGGACAGGCCAGGTGTGGGTGCTCAGGACGTGGGAAGATGAGGACTGAAAGTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
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| 3UTR CCA 90 bp | CGCTACTCCAGTCCCCAAGAGCCACCTTATCACCTCACCTTATCCTaGCTCCTTCTCATCTTCATGCAGACACCTTTGATCCCCATGTCC | + |
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Preference number: 1 (lower is better) Translates to: RYSSPQEPPYHLTLS*LLLIFMQTPLIPMS Trigger: GGACATGGGGATCAAAGGTGTCTGCATGAAGATGAGAAGGAGCCAGGATAAGGTGAGGTGATAAGGTGGCTCTTGGGGACTGGAGTAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
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| 3UTR TCA 90 bp | GCGCCCACGGAGTTCTCAGGATTCATTTGGAGTCATAGTGCAGATTaGCTTCCAAGTCCCCTCAGTAGTGTTCTCTCCTCCCGACATCCT | + |
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Preference number: 1 (lower is better) Translates to: APTEFSGFIWSHSAD*LPSPLSSVLSSRHP Trigger: AGGATGTCGGGAGGAGAGAACACTACTGAGGGGACTTGGAAGTCAATCTGCACTATGACTCCAAATGAATCCTGAGAACTCCGTGGGCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142964.8 |
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| 3UTR GCA 90 bp | AGGTTATGTCCTTGTCATCCCTTTCCGGCCGGTCCCTTGTGGAGCTaGCCTGGAAAGTGTCTAAACACACCTGTTCAGCTCATTCTGTTC | + |
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Preference number: 1 (lower is better) Translates to: RLCPCHPFPAGPLWS*PGKCLNTPVQLILF Trigger: GAACAGAATGAGCTGAACAGGTGTGTTTAGACACTTTCCAGGGCAGCTCCACAAGGGACCGGCCGGAAAGGGATGACAAGGACATAACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| 3UTR CCA 90 bp | ACCTGGCCTGTCCATGACATCCATGTCCTTAGCCTCTACTCAACATaGATGGCCCTAATCAGGACCCTTGTGGTCCTGGAGGATTTCATC | + |
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Preference number: 1 (lower is better) Translates to: TWPVHDIHVLSLYST*MALIRTLVVLEDFI Trigger: GATGAAATCCTCCAGGACCACAAGGGTCCTGATTAGGGCCATCCATGTTGAGTAGAGGCTAAGGACATGGATGTCATGGACAGGCCAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
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| 3UTR TCA 90 bp | CGCCGGACAAGAACCTCAGGATTCATTTGGAGTCATAGTGCAGATTaGCTTCCAAGTCCCCTCAGTAGTGTTCTCTCCTCCCGACATCCT | + |
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Preference number: 1 (lower is better) Translates to: RRTRTSGFIWSHSAD*LPSPLSSVLSSRHP Trigger: AGGATGTCGGGAGGAGAGAACACTACTGAGGGGACTTGGAAGTCAATCTGCACTATGACTCCAAATGAATCCTGAGGTTCTTGTCCGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
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| 3UTR CCA 90 bp | ACATACAGGTTATGTCCTTGTCATCCCTTTCCGGCCGGTCCCTTGTaGAGCTGCCCTGGAAAGTGTCTAAACACACCTGTTCAGCTCATT | + |
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Preference number: 1 (lower is better) Translates to: TYRLCPCHPFPAGPL*SCPGKCLNTPVQLI Trigger: AATGAGCTGAACAGGTGTGTTTAGACACTTTCCAGGGCAGCTCCACAAGGGACCGGCCGGAAAGGGATGACAAGGACATAACCTGTATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| 3UTR CCA 90 bp | CTGTCTTCAGACACCAGAAGAGGGCATTACATGCCACCATGTGGTTaGTGGGAATTGAACTCAGGACCTCTGGTTAAGAGCAGGAAGTGC | + |
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Preference number: 1 (lower is better) Translates to: LSSDTRRGHYMPPCG*WELNSGPLVKSRKC Trigger: GCACTTCCTGCTCTTAACCAGAGGTCCTGAGTTCAATTCCCACCAACCACATGGTGGCATGTAATGCCCTCTTCTGGTGTCTGAAGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| 3UTR TCA 90 bp | AAACAGGGCCAGCTGGTCCAGCCATGCAATGCCTTGCTTGGACTATaGTCCCAAGAATGGCCAACAGTCTTAATTCAGCCAAGGCTTGTA | + |
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Preference number: 1 (lower is better) Translates to: KQGQLVQPCNALLGL*SQEWPTVLIQPRLV Trigger: TACAAGCCTTGGCTGAATTAAGACTGTTGGCCATTCTTGGGATCATAGTCCAAGCAAGGCATTGCATGGCTGGACCAGCTGGCCCTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138050.2 ENSMUST00000142964.8 |
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| 3UTR CCA 90 bp | TCTTCAGACACCAGAAGAGGGCATTACATGCCACCATGTGGTTGGTaGGAATTGAACTCAGGACCTCTGGTTAAGAGCAGGAAGTGCTCT | + |
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Preference number: 1 (lower is better) Translates to: SSDTRRGHYMPPCGW*ELNSGPLVKSRKCS Trigger: AGAGCACTTCCTGCTCTTAACCAGAGGTCCTGAGTTCAATTCCCACCAACCACATGGTGGCATGTAATGCCCTCTTCTGGTGTCTGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| 3UTR CCA 90 bp | CGCGCCCACCCTTCAAGAATAGCCAACACTCCTGAAATCCTAACTTaGCCCCTGACAATGGCACTTTCTTACTCAAATGCCTGTCTATCC | + |
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Preference number: 1 (lower is better) Translates to: RAHPSRIANTPEILT*PLTMALSYSNACLS Trigger: GGATAGACAGGCATTTGAGTAAGAAAGTGCCATTGTCAGGGGCCAAGTTAGGATTTCAGGAGTGTTGGCTATTCTTGAAGGGTGGGCGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
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| 3UTR TCA 90 bp | ACCTCACCTTATCCTGGCTCCTTCTCATCTTCATGCAGACACCTTTaGTCCCCATGTCCTTGCGGAAATCTGCTACACATGTGCTCTAAC | + |
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Preference number: 1 (lower is better) Translates to: TSPYPGSFSSSCRHL*SPCPCGNLLHMCSN Trigger: GTTAGAGCACATGTGTAGCAGATTTCCGCAAGGACATGGGGATCAAAGGTGTCTGCATGAAGATGAGAAGGAGCCAGGATAAGGTGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
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| 3UTR GCA 90 bp | CATCTTCATGCAGACACCTTTGATCCCCATGTCCTTGCGGAAATCTaGTACACATGTGCTCTAACTCGGCATCCTATGCTCTGCTCTGTT | + |
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Preference number: 1 (lower is better) Translates to: HLHADTFDPHVLAEI*YTCALTRHPMLCSV Trigger: AACAGAGCAGAGCATAGGATGCCGAGTTAGAGCACATGTGTAGCAGATTTCCGCAAGGACATGGGGATCAAAGGTGTCTGCATGAAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCACCACCACAGCTGGGCTACTGGACTCCAGAGGGCCATGCTCCAGCCACACAGAAACAGGGCCAGCTaGTCCAGCCATGCAATGCCT | + |
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Preference number: 2 (lower is better) Translates to: CHHHSWATGLQRAMLQPHRNRAS*SSHAMP Trigger: AGGCATTGCATGGCTGGACCAGCTGGCCCTGTTTCT...GTGTGGCTGGAGCATGGCCCTCTGGAGTCCAGTAGCCCAGCTGTGGTGGTGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142964.8 |
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| 3UTR CAA 90 bp | AGGGCCTGGCACAGCTTGGAGGGACCACTACAGAGTTCACGGTCCTaGAGGGAACGGCCGACAGTGCTTTTTCGGAGGGAGTTACGAAGC | + |
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Preference number: 2 (lower is better) Translates to: RAWHSLEGPLQSSRS*RERPTVLFRRELRS Trigger: GCTTCGTAACTCCCTCCGAAAAAGCACTGTCGGCCGTTCCCTCAAGGACCGTGAACTCTGTAGTGGTCCCTCCAAGCTGTGCCAGGCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142964.8 |
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| 3UTR CAA 90 bp | TCTCGCTGGTCAAAGCTCTTATCAATGGCCAGGGCCTGGCACAGCTaGGAGGGACCACTACAGAGTTCACGGTCCTTGAGGGAACGGCCG | + |
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Preference number: 2 (lower is better) Translates to: SRWSKLLSMARAWHS*EGPLQSSRSLRERP Trigger: CGGCCGTTCCCTCAAGGACCGTGAACTCTGTAGTGGTCCCTCCAAGCTGTGCCAGGCCCTGGCCATTGATAAGAGCTTTGACCAGCGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142964.8 |
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| 3UTR-3UTR GCA 90 bp | TACCACACTGACCCATGGGCTGCCCTGGACATAGAAGCGCAAGGGCTTCTGTGTAGGGAGTTACGAAGCTaGCGCATGGTCTCCAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: YHTDPWAALDIEAQGLLCRELRS*RMVSRP Trigger: GGGCCTGGAGACCATGCGGCAGCTTCGTAACTCCCT...ACACAGAAGCCCTTGCGCTTCTATGTCCAGGGCAGCCCATGGGTCAGTGTGGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142964.8 |
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| 3UTR-3UTR CCA 90 bp | ACCACTACAGAGTTCACGGTCCTTGAGGGAACGGCCGACAGTGCTTTTTCGGAGTACGAAGCTGCCGCATaGTCTCCAGGCCCTCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: TTTEFTVLEGTADSAFSEYEAAA*SPGPPG Trigger: CCCTGGAGGGCCTGGAGACCATGCGGCAGCTTCGTA...CTCCGAAAAAGCACTGTCGGCCGTTCCCTCAAGGACCGTGAACTCTGTAGTGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142964.8 |
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| 3UTR-3UTR TCA 90 bp | ACCACTACAGAGTTCACGGTCCTTGAGGGAACGGCCGACAGTGCTTTTTCGGAGCGGCCACCTCTTGAGTaGGCAGCTTCATCTTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: TTTEFTVLEGTADSAFSERPPLE*AASSSG Trigger: GCCAGAAGATGAAGCTGCTCACTCAAGAGGTGGCCG...CTCCGAAAAAGCACTGTCGGCCGTTCCCTCAAGGACCGTGAACTCTGTAGTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142964.8 |
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| 3UTR-3UTR GCA 90 bp | TATGCCTCAGTCTCCACAATGCGCCCACGGAGTTCTGTTCCATCAGCGAGTCGCCAGCTGGTCCAGCCATaGAATGCCTTGCTTGGACTA | + |
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Preference number: 2 (lower is better) Translates to: YASVSTMRPRSSVPSASRQLVQP*NALLGL Trigger: TAGTCCAAGCAAGGCATTGCATGGCTGGACCAGCTG...GCGACTCGCTGATGGAACAGAACTCCGTGGGCGCATTGTGGAGACTGAGGCATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
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| 3UTR-3UTR GCA 90 bp | TACCACACTGACCCATGGGCTGCCCTGGACATAGAAGCGCAAGGGCTTCTGTGTCAGCTGGTCCAGCCATaGAATGCCTTGCTTGGACTA | + |
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Preference number: 2 (lower is better) Translates to: YHTDPWAALDIEAQGLLCQLVQP*NALLGL Trigger: TAGTCCAAGCAAGGCATTGCATGGCTGGACCAGCTG...ACACAGAAGCCCTTGCGCTTCTATGTCCAGGGCAGCCCATGGGTCAGTGTGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142964.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCCCAGCCCCTTGACTAGAGACATTCAAGCAGAAGTACATGCCATAGATGAGCTGCCGGCCACCTCTTaGGTGAGCAGCTTCATCTTC | + |
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Preference number: 2 (lower is better) Translates to: SPSPLTRDIQAEVHAIDELPATS*VSSFIF Trigger: GAAGATGAAGCTGCTCACTCAAGAGGTGGCCGGCAG...CTCATCTATGGCATGTACTTCTGCTTGAATGTCTCTAGTCAAGGGGCTGGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142964.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGGAAGTGCTCTTAACCACCTAGCCATCTCTCCAGCCCCCAGGATGTGTCTTCTTGTGGAGCTGCCCTaGAAAGTGTCTAAACACACC | + |
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Preference number: 2 (lower is better) Translates to: AGSALNHLAISPAPRMCLLVELP*KVSKHT Trigger: GGTGTGTTTAGACACTTTCCAGGGCAGCTCCACAAG...AAGACACATCCTGGGGGCTGGAGAGATGGCTAGGTGGTTAAGAGCACTTCCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| 3UTR-3UTR CCA 90 bp | ATCTGTATGTTCATTCTTGCCTCTGCCTTGTCCACCGTGTCCAGGGAACCTCCAAGAAACAGGGCCAGCTaGTCCAGCCATGCAATGCCT | + |
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Preference number: 2 (lower is better) Translates to: ICMFILASALSTVSREPPRNRAS*SSHAMP Trigger: AGGCATTGCATGGCTGGACCAGCTGGCCCTGTTTCT...TGGAGGTTCCCTGGACACGGTGGACAAGGCAGAGGCAAGAATGAACATACAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
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| 3UTR CAA 90 bp | TACACATACAGGTTATGTCCTTGTCATCCCTTTCCGGCCGGTCCCTaGTGGAGCTGCCCTGGAAAGTGTCTAAACACACCTGTTCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: YTYRLCPCHPFPAGP*WSCPGKCLNTPVQL Trigger: GAGCTGAACAGGTGTGTTTAGACACTTTCCAGGGCAGCTCCACAAGGGACCGGCCGGAAAGGGATGACAAGGACATAACCTGTATGTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| 3UTR CAA 90 bp | GTGGTCCTGGAGGATTTCATCTGTATGTTCATTCTTGCCTCTGCCTaGTCCACCGTGTCCAGGGAACCTCCACTAAAGCTGTCTATGGCC | + |
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Preference number: 2 (lower is better) Translates to: VVLEDFICMFILASA*STVSREPPLKLSMA Trigger: GGCCATAGACAGCTTTAGTGGAGGTTCCCTGGACACGGTGGACAAGGCAGAGGCAAGAATGAACATACAGATGAAATCCTCCAGGACCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAGTGCTCTTAACCACCTAGCCATCTCTCCAGCCCCCAGGATGTGTCTTCAGAACACAAATTCTGGCTaGGACTTGGGGACAGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: GSALNHLAISPAPRMCLQNTNSG*DLGTVL Trigger: GAGAACTGTCCCCAAGTCTCAGCCAGAATTTGTGTT...CTGAAGACACATCCTGGGGGCTGGAGAGATGGCTAGGTGGTTAAGAGCACTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| 3UTR-3UTR GCA 90 bp | CCTCCCTCTTCAATCTGGTCCTTACGGCAGCTTAATATTGCTGAGCTGGAGAAGGGTCCCTTGTGGAGCTaGCCTGGAAAGTGTCTAAAC | + |
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Preference number: 2 (lower is better) Translates to: PPSSIWSLRQLNIAELEKGPLWS*PGKCLN Trigger: GTTTAGACACTTTCCAGGGCAGCTCCACAAGGGACC...CTTCTCCAGCTCAGCAATATTAAGCTGCCGTAAGGACCAGATTGAAGAGGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| 3UTR-3UTR TCA 90 bp | GGTTATGTCCTTGTCATCCCTTTCCGGCCGGTCCCTTGTGGAGCTGCCCTGGAAAAAGAATTAACTGCATaGACACAAATTCTGGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: GYVLVIPFRPVPCGAALEKELTA*TQILAE Trigger: CTCAGCCAGAATTTGTGTTCATGCAGTTAATTCTTT...TTCCAGGGCAGCTCCACAAGGGACCGGCCGGAAAGGGATGACAAGGACATAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| 3UTR-3UTR TCA 90 bp | CAATCTGGTCCTTACGGCAGCTTAATATTGCTGAGCTGGAGAAGGTCTTCCAGGGTGGTTGGTGGGAATTaGACTCAGGACCTCTGGTTA | + |
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Preference number: 2 (lower is better) Translates to: QSGPYGSLILLSWRRSSRVVGGN*TQDLWL Trigger: TAACCAGAGGTCCTGAGTTCAATTCCCACCAACCAC...CCTGGAAGACCTTCTCCAGCTCAGCAATATTAAGCTGCCGTAAGGACCAGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| 3UTR-3UTR TCA 90 bp | GCACCACTAACCTTGACTAGAGACATTCAAGCAGAAGTACATGCCATAGATGAGCGGCCACCTCTTGAGTaGGCAGCTTCATCTTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: APLTLTRDIQAEVHAIDERPPLE*AASSSG Trigger: GCCAGAAGATGAAGCTGCTCACTCAAGAGGTGGCCG...CTCATCTATGGCATGTACTTCTGCTTGAATGTCTCTAGTCAAGGTTAGTGGTGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGGTCCTTACGGCAGCTTAATATTGCTGAGCTGGAGAAGGTCTTCCAGGATGCCACCATGTGGTTGGTaGGAATTGAACTCAGGACCT | + |
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Preference number: 2 (lower is better) Translates to: SGPYGSLILLSWRRSSRMPPCGW*ELNSGP Trigger: AGGTCCTGAGTTCAATTCCCACCAACCACATGGTGG...CATCCTGGAAGACCTTCTCCAGCTCAGCAATATTAAGCTGCCGTAAGGACCAGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| 3UTR-3UTR CCA 90 bp | ACTCGGCATCCTATGCTCTGCTCTGTTTGGACTTTCAGTCCTCATCTTCCCACGCCTGAAATCCTAACTTaGCCCCTGACAATGGCACTT | + |
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Preference number: 2 (lower is better) Translates to: TRHPMLCSVWTFSPHLPTPEILT*PLTMAL Trigger: AAGTGCCATTGTCAGGGGCCAAGTTAGGATTTCAGG...CGTGGGAAGATGAGGACTGAAAGTCCAAACAGAGCAGAGCATAGGATGCCGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCCAAGAGCCACCTTATCACCTCACCTTATCCTGGCTCCTTCTCATCTTCATGGGCAGAAGTGTTCCTaGCTGAGAATAGCTGAGCTA | + |
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Preference number: 2 (lower is better) Translates to: SPRATLSPHLILAPSHLHGQKCS*LRIAEL Trigger: TAGCTCAGCTATTCTCAGCCAGGAACACTTCTGCCC...ATGAAGATGAGAAGGAGCCAGGATAAGGTGAGGTGATAAGGTGGCTCTTGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
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| 3UTR CAA 90 bp | CCAGCTGCTAGACTGTCTGTTCCCTCAAGCCCAGCACCACTAACCTaGACTAGAGACATTCAAGCAGAAGTACATGCCATAGATGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: PAARLSVPSSPAPLT*TRDIQAEVHAIDEV Trigger: TACCTCATCTATGGCATGTACTTCTGCTTGAATGTCTCTAGTCAAGGTTAGTGGTGCTGGGCTTGAGGGAACAGACAGTCTAGCAGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
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| 3UTR-3UTR CCA 90 bp | CAATCTGGTCCTTACGGCAGCTTAATATTGCTGAGCTGGAGAAGGTCTTCCAGGTTACATGCCACCATGTaGTTGGTGGGAATTGAACTC | + |
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Preference number: 2 (lower is better) Translates to: QSGPYGSLILLSWRRSSRLHATM*LVGIEL Trigger: GAGTTCAATTCCCACCAACCACATGGTGGCATGTAA...CCTGGAAGACCTTCTCCAGCTCAGCAATATTAAGCTGCCGTAAGGACCAGATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| 3UTR-3UTR GCA 90 bp | CCTCCCTCTTCAATCTGGTCCTTACGGCAGCTTAATATTGCTGAGCTGGAGAAGGTTTTTCCTCTCTGTTaGCATACATACTGGGTAACC | + |
|
Preference number: 2 (lower is better) Translates to: PPSSIWSLRQLNIAELEKVFPLC*HTYWVT Trigger: GGTTACCCAGTATGTATGGCAACAGAGAGGAAAAAC...CTTCTCCAGCTCAGCAATATTAAGCTGCCGTAAGGACCAGATTGAAGAGGGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
||
| 3UTR-3UTR CCA 90 bp | CAATCTGGTCCTTACGGCAGCTTAATATTGCTGAGCTGGAGAAGGTCTTCCAGGATTCTGGCTGAGACTTaGGGACAGTTCTCTAAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: QSGPYGSLILLSWRRSSRILAET*GQFSKN Trigger: GTTTTTAGAGAACTGTCCCCAAGTCTCAGCCAGAAT...CCTGGAAGACCTTCTCCAGCTCAGCAATATTAAGCTGCCGTAAGGACCAGATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
||
| 3UTR CAA 90 bp | TGTAGAAGGATTTCAGCATCCAACCGTGTCCATTCCTTCACAGGTTaGAGGGATTATTTGATTAGAAGGCACCTTCTTCTCAGCCCACGT | + |
|
Preference number: 2 (lower is better) Translates to: CRRISASNRVHSFTG*RDYLIRRHLLLSPR Trigger: ACGTGGGCTGAGAAGAAGGTGCCTTCTAATCAAATAATCCCTCAAACCTGTGAAGGAATGGACACGGTTGGATGCTGAAATCCTTCTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138050.2 ENSMUST00000142964.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTCCAGCCCCCAGGATGTGTCTTCAGAGTCCAAGTCCTTTCTTTATACACATATGTTGCCATACATACTaGGTAACCCAGTTTCCTGAC | + |
|
Preference number: 2 (lower is better) Translates to: SPAPRMCLQSPSPFFIHICCHTY*VTQFPD Trigger: GTCAGGAAACTGGGTTACCCAGTATGTATGGCAACA...TATGTGTATAAAGAAAGGACTTGGACTCTGAAGACACATCCTGGGGGCTGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
||
| 3UTR GCA 72 bp | CGGCCGACAGTGCTTTTTCGGAGGGAGTTACGAAGCTaGCGCATGGTCTCCAGGCCCTCCAGGGGCTCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: RPTVLFRRELRS*RMVSRPSRGSS Trigger: ACTAGAGCCCCTGGAGGGCCTGGAGACCATGCGGCAGCTTCGTAACTCCCTCCGAAAAAGCACTGTCGGCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142964.8 |
||
| 3UTR TCA 72 bp | GACCCAGGTCAGGAAAGCCCGGAGGATCCAGTCCTCTaGACCCCTCCTAGCTCACCACAGGGGACTTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: DPGQESPEDPVL*TPPSSPQGTSL Trigger: GAGAGAAGTCCCCTGTGGTGAGCTAGGAGGGGTTCAGAGGACTGGATCCTCCGGGCTTTCCTGACCTGGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
||
| 3UTR CCA 72 bp | ACCAATACCTATACGGGCTGCTGCCACCACCACAGCTaGGCTACTGGACTCCAGAGGGCCATGCTCCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: TNTYTGCCHHHS*ATGLQRAMLQP Trigger: TGGCTGGAGCATGGCCCTCTGGAGTCCAGTAGCCCAGCTGTGGTGGTGGCAGCAGCCCGTATAGGTATTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142964.8 |
||
| 3UTR GCA 72 bp | TGTCCACTCCCCTGCATGACCAATACCTATACGGGCTaGTGCCACCACCACAGCTGGGCTACTGGACTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: CPLPCMTNTYTG*CHHHSWATGLQ Trigger: CTGGAGTCCAGTAGCCCAGCTGTGGTGGTGGCAGCAGCCCGTATAGGTATTGGTCATGCAGGGGAGTGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142964.8 |
||
| 3UTR CCA 72 bp | CAGTGCTTTTTCGGAGGGAGTTACGAAGCTGCCGCATaGTCTCCAGGCCCTCCAGGGGCTCTAGTGCTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: QCFFGGSYEAAA*SPGPPGALVLL Trigger: TAAGAGCACTAGAGCCCCTGGAGGGCCTGGAGACCATGCGGCAGCTTCGTAACTCCCTCCGAAAAAGCACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142964.8 |
||
| 3UTR TCA 72 bp | ACAGCTTGGAGGGACCACTACAGAGTTCACGGTCCTTaGGGGAACGGCCGACAGTGCTTTTTCGGAGGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: TAWRDHYRVHGP*GNGRQCFFGGS Trigger: ACTCCCTCCGAAAAAGCACTGTCGGCCGTTCCCTCAAGGACCGTGAACTCTGTAGTGGTCCCTCCAAGCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142964.8 |
||
| 3UTR GCA 72 bp | GACATAGAAGCGCAAGGGCTTCTGTGTCCACTCCCCTaGATGACCAATACCTATACGGGCTGCTGCCACCAC | + |
|
Preference number: 3 (lower is better) Translates to: DIEAQGLLCPLP*MTNTYTGCCHH Trigger: GTGGTGGCAGCAGCCCGTATAGGTATTGGTCATGCAGGGGAGTGGACACAGAAGCCCTTGCGCTTCTATGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142964.8 |
||
| 3UTR CCA 72 bp | CAGTCCTCATCTTCCCACGTCCTGAGCACCCACACCTaGCCTGTCCATGACATCCATGTCCTTAGCCTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: QSSSSHVLSTHT*PVHDIHVLSLY Trigger: GTAGAGGCTAAGGACATGGATGTCATGGACAGGCCAGGTGTGGGTGCTCAGGACGTGGGAAGATGAGGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
||
| 3UTR CCA 72 bp | TGCCTTGGAGCTAGAGTTACAGAGGTTGTGAGCCATTaGGTGTGGGGCTGGGAACAGCAGAAGAGCAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: CLGARVTEVVSH*VWGWEQQKSRK Trigger: CTTCCTGCTCTTCTGCTGTTCCCAGCCCCACACCCAATGGCTCACAACCTCTGTAACTCTAGCTCCAAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
||
| 3UTR TCA 72 bp | CAGCCGCGCCCACCCTTCAAGAATAGCCAACACTCCTaGAATCCTAACTTGGCCCCTGACAATGGCACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: QPRPPFKNSQHS*NPNLAPDNGTF Trigger: GAAAGTGCCATTGTCAGGGGCCAAGTTAGGATTTCAGGAGTGTTGGCTATTCTTGAAGGGTGGGCGCGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
||
| 3UTR TCA 72 bp | TCTGTTTGGACTTTCAGTCCTCATCTTCCCACGTCCTaGGCACCCACACCTGGCCTGTCCATGACATCCATG | + |
|
Preference number: 3 (lower is better) Translates to: SVWTFSPHLPTS*APTPGLSMTSM Trigger: CATGGATGTCATGGACAGGCCAGGTGTGGGTGCTCAGGACGTGGGAAGATGAGGACTGAAAGTCCAAACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
||
| 3UTR CCA 72 bp | TCATCCCTTTCCGGCCGGTCCCTTGTGGAGCTGCCCTaGAAAGTGTCTAAACACACCTGTTCAGCTCATTCT | + |
|
Preference number: 3 (lower is better) Translates to: SSLSGRSLVELP*KVSKHTCSAHS Trigger: AGAATGAGCTGAACAGGTGTGTTTAGACACTTTCCAGGGCAGCTCCACAAGGGACCGGCCGGAAAGGGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
||
| 3UTR-3UTR CAA 90 bp | CAGGTTATGTCCTTGTCATCCCTTTCCGGCCGGTCCCTTGTGGAGCTGCCCTGGGTATACACCTGCACGTaGATGTTTTTCCTCTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: QVMSLSSLSGRSLVELPWVYTCT*MFFLSV Trigger: AACAGAGAGGAAAAACATCAACGTGCAGGTGTATAC...CCAGGGCAGCTCCACAAGGGACCGGCCGGAAAGGGATGACAAGGACATAACCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
||
| 3UTR GCA 72 bp | TGTGGTCCTGGAGGATTTCATCTGTATGTTCATTCTTaGCTCTGCCTTGTCCACCGTGTCCAGGGAACCTCC | + |
|
Preference number: 3 (lower is better) Translates to: CGPGGFHLYVHS*LCLVHRVQGTS Trigger: GGAGGTTCCCTGGACACGGTGGACAAGGCAGAGGCAAGAATGAACATACAGATGAAATCCTCCAGGACCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
||
| 3UTR CCA 72 bp | TTATGTCCTTGTCATCCCTTTCCGGCCGGTCCCTTGTaGAGCTGCCCTGGAAAGTGTCTAAACACACCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LCPCHPFPAGPL*SCPGKCLNTPV Trigger: AACAGGTGTGTTTAGACACTTTCCAGGGCAGCTCCACAAGGGACCGGCCGGAAAGGGATGACAAGGACATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
||
| 3UTR CCA 72 bp | TTGCTCTCTCCTACCCACCAGCCTCCCTCTTCAATCTaGTCCTTACGGCAGCTTAATATTGCTGAGCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LLSPTHQPPSSI*SLRQLNIAELE Trigger: CTCCAGCTCAGCAATATTAAGCTGCCGTAAGGACCAGATTGAAGAGGGAGGCTGGTGGGTAGGAGAGAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
||
| 3UTR CCA 72 bp | GTCCATGACATCCATGTCCTTAGCCTCTACTCAACATaGATGGCCCTAATCAGGACCCTTGTGGTCCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: VHDIHVLSLYST*MALIRTLVVLE Trigger: CTCCAGGACCACAAGGGTCCTGATTAGGGCCATCCATGTTGAGTAGAGGCTAAGGACATGGATGTCATGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCGGCATCCTATGCTCTGCTCTGTTTGGACTTTCAGTCCTCATCTTCCCACGTTCTGTATGTTCATTCTaGCCTCTGCCTTGTCCACCG | + |
|
Preference number: 3 (lower is better) Translates to: LGILCSALFGLSVLIFPRSVCSF*PLPCPP Trigger: CGGTGGACAAGGCAGAGGCAAGAATGAACATACAGA...ACGTGGGAAGATGAGGACTGAAAGTCCAAACAGAGCAGAGCATAGGATGCCGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
||
| 3UTR TCA 72 bp | GAGGGCATTACATGCCACCATGTGGTTGGTGGGAATTaGACTCAGGACCTCTGGTTAAGAGCAGGAAGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: EGITCHHVVGGN*TQDLWLRAGSA Trigger: AGCACTTCCTGCTCTTAACCAGAGGTCCTGAGTTCAATTCCCACCAACCACATGGTGGCATGTAATGCCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
||
| 3UTR GCA 72 bp | GCAGACACCTTTGATCCCCATGTCCTTGCGGAAATCTaGTACACATGTGCTCTAACTCGGCATCCTATGCTC | + |
|
Preference number: 3 (lower is better) Translates to: ADTFDPHVLAEI*YTCALTRHPML Trigger: GAGCATAGGATGCCGAGTTAGAGCACATGTGTAGCAGATTTCCGCAAGGACATGGGGATCAAAGGTGTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
||
| 3UTR CCA 72 bp | ACCAGAAGAGGGCATTACATGCCACCATGTGGTTGGTaGGAATTGAACTCAGGACCTCTGGTTAAGAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: TRRGHYMPPCGW*ELNSGPLVKSR Trigger: CCTGCTCTTAACCAGAGGTCCTGAGTTCAATTCCCACCAACCACATGGTGGCATGTAATGCCCTCTTCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
||
| 3UTR CCA 72 bp | GACACCAGAAGAGGGCATTACATGCCACCATGTGGTTaGTGGGAATTGAACTCAGGACCTCTGGTTAAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: DTRRGHYMPPCG*WELNSGPLVKS Trigger: GCTCTTAACCAGAGGTCCTGAGTTCAATTCCCACCAACCACATGGTGGCATGTAATGCCCTCTTCTGGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
||
| 3UTR-3UTR CAA 90 bp | AGAGCAGGAAGTGCTCTTAACCACCTAGCCATCTCTCCAGCCCCCAGGATGTGTTGTTTTTCCTCTCTGTaGCCATACATACTGGGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: RAGSALNHLAISPAPRMCCFSSL*PYILGN Trigger: GTTACCCAGTATGTATGGCAACAGAGAGGAAAAACA...ACACATCCTGGGGGCTGGAGAGATGGCTAGGTGGTTAAGAGCACTTCCTGCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
||
| 3UTR TCA 72 bp | CAGCTGGTCCAGCCATGCAATGCCTTGCTTGGACTATaGTCCCAAGAATGGCCAACAGTCTTAATTCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: QLVQPCNALLGL*SQEWPTVLIQP Trigger: TGGCTGAATTAAGACTGTTGGCCATTCTTGGGATCATAGTCCAAGCAAGGCATTGCATGGCTGGACCAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138050.2 ENSMUST00000142964.8 |
||
| 3UTR GCA 72 bp | TGCTACACATGTGCTCTAACTCGGCATCCTATGCTCTaGTCTGTTTGGACTTTCAGTCCTCATCTTCCCACG | + |
|
Preference number: 3 (lower is better) Translates to: CYTCALTRHPML*SVWTFSPHLPT Trigger: CGTGGGAAGATGAGGACTGAAAGTCCAAACAGAGCAGAGCATAGGATGCCGAGTTAGAGCACATGTGTAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
||
| 3UTR CCA 72 bp | CATTTCAGGGAGAAGCAGGTTACAGAGTGTAAGTACTaGATACATGGTCGCTACTCCAGTCCCCAAGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: HFREKQVTECKY*IHGRYSSPQEP Trigger: TGGCTCTTGGGGACTGGAGTAGCGACCATGTATCCAGTACTTACACTCTGTAACCTGCTTCTCCCTGAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
||
| 3UTR-3UTR CAA 90 bp | GCACCACTAACCTTGACTAGAGACATTCAAGCAGAAGTACATGCCATAGATGAGTCTGCCGGCCACCTCTaGAGTGAGCAGCTTCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: APLTLTRDIQAEVHAIDESAGHL*SEQLHL Trigger: AAGATGAAGCTGCTCACTCAAGAGGTGGCCGGCAGA...CTCATCTATGGCATGTACTTCTGCTTGAATGTCTCTAGTCAAGGTTAGTGGTGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
||
| 3UTR TCA 72 bp | TATCCTGGCTCCTTCTCATCTTCATGCAGACACCTTTaGTCCCCATGTCCTTGCGGAAATCTGCTACACATG | + |
|
Preference number: 3 (lower is better) Translates to: YPGSFSSSCRHL*SPCPCGNLLHM Trigger: CATGTGTAGCAGATTTCCGCAAGGACATGGGGATCAAAGGTGTCTGCATGAAGATGAGAAGGAGCCAGGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGGGAGAAGCAGGTTACAGAGTGTAAGTACTGGATACATGGTCGCTACTCCCCCATAATAGGATTTTaGGCAGGTTCCTGTATGAGC | + |
|
Preference number: 3 (lower is better) Translates to: FREKQVTECKYWIHGRYSPIIGF*AGSCMS Trigger: GCTCATACAGGAACCTGCCAAAAATCCTATTATGGG...GGAGTAGCGACCATGTATCCAGTACTTACACTCTGTAACCTGCTTCTCCCTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
||
| 3UTR TCA 72 bp | AGAACCTCAGGATTCATTTGGAGTCATAGTGCAGATTaGCTTCCAAGTCCCCTCAGTAGTGTTCTCTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: RTSGFIWSHSAD*LPSPLSSVLSS Trigger: GGAGGAGAGAACACTACTGAGGGGACTTGGAAGTCAATCTGCACTATGACTCCAAATGAATCCTGAGGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
||
| 3UTR TCA 72 bp | GAGTTCTCAGGATTCATTTGGAGTCATAGTGCAGATTaGCTTCCAAGTCCCCTCAGTAGTGTTCTCTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: EFSGFIWSHSAD*LPSPLSSVLSS Trigger: GGAGGAGAGAACACTACTGAGGGGACTTGGAAGTCAATCTGCACTATGACTCCAAATGAATCCTGAGAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142964.8 |
||
| 3UTR GCA 72 bp | TGTATACACCTGCACGTTGATGTTTTTCCTCTCTGTTaGCATACATACTGGGTAACCCAGTTTCCTGACCCG | + |
|
Preference number: 3 (lower is better) Translates to: CIHLHVDVFPLC*HTYWVTQFPDP Trigger: CGGGTCAGGAAACTGGGTTACCCAGTATGTATGGCAACAGAGAGGAAAAACATCAACGTGCAGGTGTATACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
||
| 3UTR-3UTR CAA 90 bp | TTTAGAGAACTTAGTGAGAAACAGGGCCAGCTGGTCCAGCCATGCAATGCCTTGGGTTTGAGGGATTATTaGATTAGAAGGCACCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: FRELSEKQGQLVQPCNALGLRDY*IRRHLL Trigger: AAGAAGGTGCCTTCTAATCAAATAATCCCTCAAACC...CAAGGCATTGCATGGCTGGACCAGCTGGCCCTGTTTCTCACTAAGTTCTCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138050.2 ENSMUST00000142964.8 |
||
| 3UTR TCA 72 bp | ACCCAGTTTCCTGACCCGGATAAAGAATTAACTGCATaGACACAAATTCTGGCTGAGACTTGGGGACAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: TQFPDPDKELTA*TQILAETWGQF Trigger: GAACTGTCCCCAAGTCTCAGCCAGAATTTGTGTTCATGCAGTTAATTCTTTATCCGGGTCAGGAAACTGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
||
| 3UTR CCA 72 bp | CCTTCAAGAATAGCCAACACTCCTGAAATCCTAACTTaGCCCCTGACAATGGCACTTTCTTACTCAAATGCC | + |
|
Preference number: 3 (lower is better) Translates to: PSRIANTPEILT*PLTMALSYSNA Trigger: GGCATTTGAGTAAGAAAGTGCCATTGTCAGGGGCCAAGTTAGGATTTCAGGAGTGTTGGCTATTCTTGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCTCCCGACATCCTCTCCCAGAATTCCCTTTAGAGAACTTAGTGAGAAACAGGGGTTTGAGGGATTATTaGATTAGAAGGCACCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SSRHPLPEFPLENLVRNRGLRDY*IRRHLL Trigger: AAGAAGGTGCCTTCTAATCAAATAATCCCTCAAACC...CCTGTTTCTCACTAAGTTCTCTAAAGGGAATTCTGGGAGAGGATGTCGGGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138050.2 ENSMUST00000142964.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGATGTATTTATTTAACGTATGTGAGTATACTGTTGCTGTCTTCAGACACCAGCATGCCACCATGTGGTaGGTGGGAATTGAACTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: KMYLFNVCEYTVAVFRHQHATMW*VGIELR Trigger: CCTGAGTTCAATTCCCACCAACCACATGGTGGCATG...CTGGTGTCTGAAGACAGCAACAGTATACTCACATACGTTAAATAAATACATCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
||
| CDS-3UTR TCA 90 bp | TTTTCGGAGGGAGTTACGAAGCTGCCGCATGGTCTCCAGGCCCTCCAGGGGCTCATCTGGCCGACCTCATaGTATCCGGTCACTAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FSEGVTKLPHGLQALQGLIWPTS*YPVTRD Trigger: ATCCCTAGTGACCGGATATCATGAGGTCGGCCAGAT...GAGCCCCTGGAGGGCCTGGAGACCATGCGGCAGCTTCGTAACTCCCTCCGAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142964.8 |
||
| 3UTR CAA 72 bp | CACAGCTTGGAGGGACCACTACAGAGTTCACGGTCCTaGAGGGAACGGCCGACAGTGCTTTTTCGGAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HSLEGPLQSSRS*RERPTVLFRRE Trigger: CTCCCTCCGAAAAAGCACTGTCGGCCGTTCCCTCAAGGACCGTGAACTCTGTAGTGGTCCCTCCAAGCTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142964.8 |
||
| CDS-3UTR TCA 90 bp | AGAGCAGGAAGTGCTCTTAACCACCTAGCCATCTCTCCAGCCCCCAGGATGTGTCGGCCACCTCTTGAGTaGGCAGCTTCATCTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RAGSALNHLAISPAPRMCRPPLE*AASSSG Trigger: GCCAGAAGATGAAGCTGCTCACTCAAGAGGTGGCCG...ACACATCCTGGGGGCTGGAGAGATGGCTAGGTGGTTAAGAGCACTTCCTGCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
||
| CDS-3UTR GCA 90 bp | GCAGCTTCATCTTCTGGCCCCAAGTATGCCTCAGTCTCCACAATGCGCCCACGGCTCTCTTTAGGGGTCTaGTGCTGCTCTGAATCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AASSSGPKYASVSTMRPRLSLGV*CCSESA Trigger: GGCAGATTCAGAGCAGCAGCAGACCCCTAAAGAGAG...CCGTGGGCGCATTGTGGAGACTGAGGCATACTTGGGGCCAGAAGATGAAGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138050.2 ENSMUST00000142964.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCCTCATCTTCCCACGTCCTGAGCACCCACACCTGGCCTGTCCATGACATCAATGGTCCTCTGGGCTaGAGAAGTAGATACTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: QSSSSHVLSTHTWPVHDINGPLG*RSRYSA Trigger: GGCGGAGTATCTACTTCTCCAGCCCAGAGGACCATT...GATGTCATGGACAGGCCAGGTGTGGGTGCTCAGGACGTGGGAAGATGAGGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCAGGAAGTGCTCTTAACCACCTAGCCATCTCTCCAGCCCCCAGGATGTGTGGGCCTGGCACAGCTTaGAGGGACCACTACAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RAGSALNHLAISPAPRMCGPGTA*RDHYRV Trigger: AACTCTGTAGTGGTCCCTCCAAGCTGTGCCAGGCCC...ACACATCCTGGGGGCTGGAGAGATGGCTAGGTGGTTAAGAGCACTTCCTGCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
||
| CDS-3UTR GCA 90 bp | GAGGGACCACTACAGAGTTCACGGTCCTTGAGGGAACGGCCGACAGTGCTTTTTTTAGGGGTCTGCTGCTaGTCTGAATCTGCCAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: EGPLQSSRSLRERPTVLFLGVCC*SESASR Trigger: GCGACTGGCAGATTCAGAGCAGCAGCAGACCCCTAA...AAAAAGCACTGTCGGCCGTTCCCTCAAGGACCGTGAACTCTGTAGTGGTCCCTC 56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000142964.8 |
||
| CDS-3UTR GCA 90 bp | GCCCTCAGAGGTCAGAAGAAAGCATGCCTTGGAGCTAGAGTTACAGAGGTTGTGACCTATACGGGCTGCTaGCACCACCACAGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALRGQKKACLGARVTEVVTYTGC*HHHSWA Trigger: AGCCCAGCTGTGGTGGTGGCAGCAGCCCGTATAGGT...CACAACCTCTGTAACTCTAGCTCCAAGGCATGCTTTCTTCTGACCTCTGAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
||
| CDS-3UTR CCA 90 bp | AGCTTGGAGGGACCACTACAGAGTTCACGGTCCTTGAGGGAACGGCCGACAGTGGGCCAGTGTTTGTCATaGAAGCCTGGAAACACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLEGPLQSSRSLRERPTVGQCLS*KPGNTV Trigger: GACAGTGTTTCCAGGCTTCCATGACAAACACTGGCC...CACTGTCGGCCGTTCCCTCAAGGACCGTGAACTCTGTAGTGGTCCCTCCAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142964.8 |
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| CDS-3UTR TCA 90 bp | GATGAGGTACACATACAGGGTCCCAGGTTTCATGAACATGCCACGGTTCCGGGGATCTGGCCGACCTCATaGTATCCGGTCACTAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: DEVHIQGPRFHEHATVPGIWPTS*YPVTRD Trigger: ATCCCTAGTGACCGGATATCATGAGGTCGGCCAGAT...CCCCGGAACCGTGGCATGTTCATGAAACCTGGGACCCTGTATGTGTACCTCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138050.2 ENSMUST00000142964.8 |
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| CDS-3UTR TCA 90 bp | TGTGGTTGGTGGGAATTGAACTCAGGACCTCTGGTTAAGAGCAGGAAGTGCTCTCTCTGTCTACCACACTaGCCCATGGGCTGCCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: CGWWELNSGPLVKSRKCSLCLPH*PMGCPG Trigger: TCCAGGGCAGCCCATGGGTCAGTGTGGTAGACAGAG...AGAGCACTTCCTGCTCTTAACCAGAGGTCCTGAGTTCAATTCCCACCAACCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| CDS-3UTR CCA 90 bp | AGCCCCAGCCCCTTGACTAGAGACATTCAAGCAGAAGTACATGCCATAGATGAGCCTAGCCGGCCAGAATaGTCCTCTGGGCTGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: SPSPLTRDIQAEVHAIDEPSRPE*SSGLEK Trigger: CTTCTCCAGCCCAGAGGACCATTCTGGCCGGCTAGG...CTCATCTATGGCATGTACTTCTGCTTGAATGTCTCTAGTCAAGGGGCTGGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142964.8 |
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| 3UTR CAA 72 bp | AGGTTATGTCCTTGTCATCCCTTTCCGGCCGGTCCCTaGTGGAGCTGCCCTGGAAAGTGTCTAAACACACCT | + |
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Preference number: 4 (lower is better) Translates to: RLCPCHPFPAGP*WSCPGKCLNTP Trigger: AGGTGTGTTTAGACACTTTCCAGGGCAGCTCCACAAGGGACCGGCCGGAAAGGGATGACAAGGACATAACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| CDS-3UTR TCA 90 bp | CAATCTGGTCCTTACGGCAGCTTAATATTGCTGAGCTGGAGAAGGTCTTCCAGGCTGCCGGCCACCTCTTaGGTGAGCAGCTTCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: QSGPYGSLILLSWRRSSRLPATS*VSSFIF Trigger: GAAGATGAAGCTGCTCACTCAAGAGGTGGCCGGCAG...CCTGGAAGACCTTCTCCAGCTCAGCAATATTAAGCTGCCGTAAGGACCAGATTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| CDS-3UTR GCA 90 bp | ATCTGGTCCTTACGGCAGCTTAATATTGCTGAGCTGGAGAAGGTCTTCCAGGATAGGGAGTTACGAAGCTaGCGCATGGTCTCCAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: IWSLRQLNIAELEKVFQDRELRS*RMVSRP Trigger: GGGCCTGGAGACCATGCGGCAGCTTCGTAACTCCCT...ATCCTGGAAGACCTTCTCCAGCTCAGCAATATTAAGCTGCCGTAAGGACCAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| CDS-3UTR CCA 90 bp | AGAGCAGGAAGTGCTCTTAACCACCTAGCCATCTCTCCAGCCCCCAGGATGTGTGCCAGAATGGTCCTCTaGGCTGGAGAAGTAGATACT | + |
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Preference number: 4 (lower is better) Translates to: RAGSALNHLAISPAPRMCARMVL*AGEVDT Trigger: AGTATCTACTTCTCCAGCCCAGAGGACCATTCTGGC...ACACATCCTGGGGGCTGGAGAGATGGCTAGGTGGTTAAGAGCACTTCCTGCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| CDS-3UTR GCA 90 bp | CGAGTCGCCGGACAAGAACCTCAGGATTCATTTGGAGTCATAGTGCAGATTGACTTAGGGGTCTGCTGCTaGTCTGAATCTGCCAGTCGC | + |
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Preference number: 4 (lower is better) Translates to: RVAGQEPQDSFGVIVQIDLGVCC*SESASR Trigger: GCGACTGGCAGATTCAGAGCAGCAGCAGACCCCTAA...GTCAATCTGCACTATGACTCCAAATGAATCCTGAGGTTCTTGTCCGGCGACTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
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| CDS-3UTR CCA 90 bp | CATTTCAGGGAGAAGCAGGTTACAGAGTGTAAGTACTGGATACATGGTCGCTACCCTAGCCGGCCAGAATaGTCCTCTGGGCTGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: HFREKQVTECKYWIHGRYPSRPE*SSGLEK Trigger: CTTCTCCAGCCCAGAGGACCATTCTGGCCGGCTAGG...GTAGCGACCATGTATCCAGTACTTACACTCTGTAACCTGCTTCTCCCTGAAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
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| CDS-3UTR CCA 90 bp | TCCTCTGAACCCCTCCTAGCTCACCACAGGGGACTTCTCTCATTTCAGGGAGAAGGCCAGTGTTTGTCATaGAAGCCTGGAAACACTGTC | + |
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Preference number: 4 (lower is better) Translates to: SSEPLLAHHRGLLSFQGEGQCLS*KPGNTV Trigger: GACAGTGTTTCCAGGCTTCCATGACAAACACTGGCC...TTCTCCCTGAAATGAGAGAAGTCCCCTGTGGTGAGCTAGGAGGGGTTCAGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
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| CDS-3UTR CCA 90 bp | GTGAGCAGCTTCATCTTCTGGCCCCAAGTATGCCTCAGTCTCCACAATGCGCCCGTAGAGGAAAAGAGGTaGCCAGTGTTTGTCATGGAA | + |
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Preference number: 4 (lower is better) Translates to: VSSFIFWPQVCLSLHNAPVEEKR*PVFVME Trigger: TTCCATGACAAACACTGGCCACCTCTTTTCCTCTAC...GGGCGCATTGTGGAGACTGAGGCATACTTGGGGCCAGAAGATGAAGCTGCTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138050.2 ENSMUST00000142964.8 |
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| CDS-3UTR GCA 90 bp | CACCTGCACGTTGATGTTTTTCCTCTCTGTTGCCATACATACTGGGTAACCCAGTTAGGGGTCTGCTGCTaGTCTGAATCTGCCAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: HLHVDVFPLCCHTYWVTQLGVCC*SESASR Trigger: GCGACTGGCAGATTCAGAGCAGCAGCAGACCCCTAA...CTGGGTTACCCAGTATGTATGGCAACAGAGAGGAAAAACATCAACGTGCAGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| CDS-3UTR CCA 90 bp | CCTCCCTCTTCAATCTGGTCCTTACGGCAGCTTAATATTGCTGAGCTGGAGAAGAATGGTCCTCTGGGCTaGAGAAGTAGATACTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PPSSIWSLRQLNIAELEKNGPLG*RSRYSA Trigger: GGCGGAGTATCTACTTCTCCAGCCCAGAGGACCATT...CTTCTCCAGCTCAGCAATATTAAGCTGCCGTAAGGACCAGATTGAAGAGGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| 3UTR CAA 72 bp | AGAGGGCATTACATGCCACCATGTGGTTGGTGGGAATaGAACTCAGGACCTCTGGTTAAGAGCAGGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RGHYMPPCGWWE*NSGPLVKSRKC Trigger: GCACTTCCTGCTCTTAACCAGAGGTCCTGAGTTCAATTCCCACCAACCACATGGTGGCATGTAATGCCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| 3UTR CAA 72 bp | CAGGATCAAAAACATCACGCTAAACTCCGTGTAGCCTaGGCTACTTTACCAGCCGCGCCCACCCTTCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: QDQKHHAKLRVA*ATLPAAPTLQE Trigger: TTCTTGAAGGGTGGGCGCGGCTGGTAAAGTAGCCAAGGCTACACGGAGTTTAGCGTGATGTTTTTGATCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
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| CDS-3UTR CCA 90 bp | ATTCCCTTTAGAGAACTTAGTGAGAAACAGGGCCAGCTGGTCCAGCCATGCAATAATGGTCCTCTGGGCTaGAGAAGTAGATACTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: IPFRELSEKQGQLVQPCNNGPLG*RSRYSA Trigger: GGCGGAGTATCTACTTCTCCAGCCCAGAGGACCATT...ATTGCATGGCTGGACCAGCTGGCCCTGTTTCTCACTAAGTTCTCTAAAGGGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138050.2 ENSMUST00000142964.8 |
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| 3UTR CAA 72 bp | CCAAGTCCTTTCTTTATACACATACAGGTTATGTCCTaGTCATCCCTTTCCGGCCGGTCCCTTGTGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: PSPFFIHIQVMS*SSLSGRSLVEL Trigger: CAGCTCCACAAGGGACCGGCCGGAAAGGGATGACAAGGACATAACCTGTATGTGTATAAAGAAAGGACTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| 3UTR CAA 72 bp | GAGGATTTCATCTGTATGTTCATTCTTGCCTCTGCCTaGTCCACCGTGTCCAGGGAACCTCCACTAAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EDFICMFILASA*STVSREPPLKL Trigger: CAGCTTTAGTGGAGGTTCCCTGGACACGGTGGACAAGGCAGAGGCAAGAATGAACATACAGATGAAATCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
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| CDS-3UTR TCA 90 bp | TCTCCAGCCCCCAGGATGTGTCTTCAGAGTCCAAGTCCTTTCTTTATACACATAATCTGGCCGACCTCATaGTATCCGGTCACTAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SPAPRMCLQSPSPFFIHIIWPTS*YPVTRD Trigger: ATCCCTAGTGACCGGATATCATGAGGTCGGCCAGAT...TATGTGTATAAAGAAAGGACTTGGACTCTGAAGACACATCCTGGGGGCTGGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| CDS-3UTR GCA 90 bp | CTAAACACACCTGTTCAGCTCATTCTGTTCCTAGGTGTATACACCTGCACGTTGCTCTCTTTAGGGGTCTaGTGCTGCTCTGAATCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LNTPVQLILFLGVYTCTLLSLGV*CCSESA Trigger: GGCAGATTCAGAGCAGCAGCAGACCCCTAAAGAGAG...CAACGTGCAGGTGTATACACCTAGGAACAGAATGAGCTGAACAGGTGTGTTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| CDS-3UTR CCA 90 bp | CCATCAGCGAGTCGCCGGACAAGAACCTCAGGATTCATTTGGAGTCATAGTGCAGTAGAGGAAAAGAGGTaGCCAGTGTTTGTCATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PSASRRTRTSGFIWSHSAVEEKR*PVFVME Trigger: TTCCATGACAAACACTGGCCACCTCTTTTCCTCTAC...TGCACTATGACTCCAAATGAATCCTGAGGTTCTTGTCCGGCGACTCGCTGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
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| CDS-3UTR CCA 90 bp | TTCACAGGTTTGAGGGATTATTTGATTAGAAGGCACCTTCTTCTCAGCCCACGTGCCAGAATGGTCCTCTaGGCTGGAGAAGTAGATACT | + |
|
Preference number: 4 (lower is better) Translates to: FTGLRDYLIRRHLLLSPRARMVL*AGEVDT Trigger: AGTATCTACTTCTCCAGCCCAGAGGACCATTCTGGC...ACGTGGGCTGAGAAGAAGGTGCCTTCTAATCAAATAATCCCTCAAACCTGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138050.2 ENSMUST00000142964.8 |
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| CDS-3UTR CCA 90 bp | AAGATGTATTTATTTAACGTATGTGAGTATACTGTTGCTGTCTTCAGACACCAGTACGAAGCTGCCGCATaGTCTCCAGGCCCTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KMYLFNVCEYTVAVFRHQYEAAA*SPGPPG Trigger: CCCTGGAGGGCCTGGAGACCATGCGGCAGCTTCGTA...CTGGTGTCTGAAGACAGCAACAGTATACTCACATACGTTAAATAAATACATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| CDS-3UTR CCA 90 bp | AGTCTCCACAATGCGCCCACGGAGTTCTCAGGATTCATTTGGAGTCATAGTGCATTTGTCATGGAAGCCTaGAAACACTGTCCCAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SLHNAPTEFSGFIWSHSAFVMEA*KHCPRN Trigger: ATTTCTGGGACAGTGTTTCCAGGCTTCCATGACAAA...TGCACTATGACTCCAAATGAATCCTGAGAACTCCGTGGGCGCATTGTGGAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142964.8 |
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| 3UTR CAA 72 bp | AGACTGTCTGTTCCCTCAAGCCCAGCACCACTAACCTaGACTAGAGACATTCAAGCAGAAGTACATGCCATA | + |
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Preference number: 4 (lower is better) Translates to: RLSVPSSPAPLT*TRDIQAEVHAI Trigger: TATGGCATGTACTTCTGCTTGAATGTCTCTAGTCAAGGTTAGTGGTGCTGGGCTTGAGGGAACAGACAGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
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| CDS-3UTR CCA 90 bp | AAGATGTATTTATTTAACGTATGTGAGTATACTGTTGCTGTCTTCAGACACCAGCCTAGCCGGCCAGAATaGTCCTCTGGGCTGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KMYLFNVCEYTVAVFRHQPSRPE*SSGLEK Trigger: CTTCTCCAGCCCAGAGGACCATTCTGGCCGGCTAGG...CTGGTGTCTGAAGACAGCAACAGTATACTCACATACGTTAAATAAATACATCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| CDS-3UTR CCA 90 bp | TATTTAACGTATGTGAGTATACTGTTGCTGTCTTCAGACACCAGAAGAGGGCATCAAAGCTCTTATCAATaGCCAGGGCCTGGCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YLTYVSILLLSSDTRRGHQSSYQ*PGPGTA Trigger: AGCTGTGCCAGGCCCTGGCCATTGATAAGAGCTTTG...ATGCCCTCTTCTGGTGTCTGAAGACAGCAACAGTATACTCACATACGTTAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| 3UTR CAA 72 bp | AACCGTGTCCATTCCTTCACAGGTTTGAGGGATTATTaGATTAGAAGGCACCTTCTTCTCAGCCCACGTAGA | + |
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Preference number: 4 (lower is better) Translates to: NRVHSFTGLRDY*IRRHLLLSPRR Trigger: TCTACGTGGGCTGAGAAGAAGGTGCCTTCTAATCAAATAATCCCTCAAACCTGTGAAGGAATGGACACGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138050.2 ENSMUST00000142964.8 |
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| CDS-3UTR GCA 90 bp | TATTTAACGTATGTGAGTATACTGTTGCTGTCTTCAGACACCAGAAGAGGGCATCTGTGTCCACTCCCCTaGATGACCAATACCTATACG | + |
|
Preference number: 4 (lower is better) Translates to: YLTYVSILLLSSDTRRGHLCPLP*MTNTYT Trigger: CGTATAGGTATTGGTCATGCAGGGGAGTGGACACAG...ATGCCCTCTTCTGGTGTCTGAAGACAGCAACAGTATACTCACATACGTTAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| CDS-3UTR TCA 90 bp | TGTATTTATTTAACGTATGTGAGTATACTGTTGCTGTCTTCAGACACCAGAAGACACACAGCATCATCTTaGGCCAGGTCTCGCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CIYLTYVSILLLSSDTRRHTASS*ARSRWS Trigger: TGACCAGCGAGACCTGGCTCAAGATGATGCTGTGTG...TCTTCTGGTGTCTGAAGACAGCAACAGTATACTCACATACGTTAAATAAATACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| CDS-3UTR CCA 90 bp | GAGCTAGATCCCATAATAGGATTTTTGGCAGGTTCCTGTATGAGCACAGCTTACTTTGTCATGGAAGCCTaGAAACACTGTCCCAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ELDPIIGFLAGSCMSTAYFVMEA*KHCPRN Trigger: ATTTCTGGGACAGTGTTTCCAGGCTTCCATGACAAA...GTAAGCTGTGCTCATACAGGAACCTGCCAAAAATCCTATTATGGGATCTAGCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
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| 3UTR CAA 72 bp | CTGAGAATAGCTGAGCTAGATCCCATAATAGGATTTTaGGCAGGTTCCTGTATGAGCACAGCTTACCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LRIAELDPIIGF*AGSCMSTAYPK Trigger: TTTTGGGTAAGCTGTGCTCATACAGGAACCTGCCAAAAATCCTATTATGGGATCTAGCTCAGCTATTCTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138050.2 |
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| CDS GCA 90 bp | GCTCTGGCATTCCCTGGGCGGCGGGCTCGTCCAAGAAATGGAGGCTaGTCGGTGTCGGGGAGCAGGGTCACGGACACCGGTTTTAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ALAFPGRRARPRNGG*SVSGSRVTDTGFRA Trigger: AGCCCTAAAACCGGTGTCCGTGACCCTGCTCCCCGACACCGAGCAGCCTCCATTTCTTGGACGAGCCCGCCGCCCAGGGAATGCCAGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020528.14 ENSMUST00000138050.2 ENSMUST00000142964.8 |
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| CDS CCA 90 bp | GGATCCTGCTCTGGCATTCCCTGGGCGGCGGGCTCGTCCAAGAAATaGAGGCTGCTCGGTGTCGGGGAGCAGGGTCACGGACACCGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GSCSGIPWAAGSSKK*RLLGVGEQGHGHRF Trigger: AAACCGGTGTCCGTGACCCTGCTCCCCGACACCGAGCAGCCTCCATTTCTTGGACGAGCCCGCCGCCCAGGGAATGCCAGAGCAGGATCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020528.14 ENSMUST00000138050.2 ENSMUST00000142964.8 |
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| CDS-3UTR CAA 90 bp | CAATCTGGTCCTTACGGCAGCTTAATATTGCTGAGCTGGAGAAGGTCTTCCAGGCAGAGTTCACGGTCCTaGAGGGAACGGCCGACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: QSGPYGSLILLSWRRSSRQSSRS*RERPTV Trigger: CACTGTCGGCCGTTCCCTCAAGGACCGTGAACTCTG...CCTGGAAGACCTTCTCCAGCTCAGCAATATTAAGCTGCCGTAAGGACCAGATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| CDS-3UTR CAA 90 bp | CACCTGCACGTTGATGTTTTTCCTCTCTGTTGCCATACATACTGGGTAACCCAGCCACACAGCATCATCTaGAGCCAGGTCTCGCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HLHVDVFPLCCHTYWVTQPHSII*SQVSLV Trigger: GACCAGCGAGACCTGGCTCAAGATGATGCTGTGTGG...CTGGGTTACCCAGTATGTATGGCAACAGAGAGGAAAAACATCAACGTGCAGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| CDS-3UTR CAA 90 bp | TGTATTTATTTAACGTATGTGAGTATACTGTTGCTGTCTTCAGACACCAGAAGAAGGGCCTGGCACAGCTaGGAGGGACCACTACAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: CIYLTYVSILLLSSDTRRRAWHS*EGPLQS Trigger: ACTCTGTAGTGGTCCCTCCAAGCTGTGCCAGGCCCT...TCTTCTGGTGTCTGAAGACAGCAACAGTATACTCACATACGTTAAATAAATACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| CDS-3UTR CAA 90 bp | TGTATTTATTTAACGTATGTGAGTATACTGTTGCTGTCTTCAGACACCAGAAGATCTGCCGGCCACCTCTaGAGTGAGCAGCTTCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: CIYLTYVSILLLSSDTRRSAGHL*SEQLHL Trigger: AAGATGAAGCTGCTCACTCAAGAGGTGGCCGGCAGA...TCTTCTGGTGTCTGAAGACAGCAACAGTATACTCACATACGTTAAATAAATACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| CDS-3UTR CAA 90 bp | TGTATTTATTTAACGTATGTGAGTATACTGTTGCTGTCTTCAGACACCAGAAGAACAAGCCCCAGCCCCTaGACTAGAGACATTCAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CIYLTYVSILLLSSDTRRTSPSP*TRDIQA Trigger: TGCTTGAATGTCTCTAGTCAAGGGGCTGGGGCTTGT...TCTTCTGGTGTCTGAAGACAGCAACAGTATACTCACATACGTTAAATAAATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020528.14 |
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| CDS GCA 72 bp | TTCCCTGGGCGGCGGGCTCGTCCAAGAAATGGAGGCTaGTCGGTGTCGGGGAGCAGGGTCACGGACACCGGT | + |
|
Preference number: 6 (lower is better) Translates to: FPGRRARPRNGG*SVSGSRVTDTG Trigger: ACCGGTGTCCGTGACCCTGCTCCCCGACACCGAGCAGCCTCCATTTCTTGGACGAGCCCGCCGCCCAGGGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020528.14 ENSMUST00000138050.2 ENSMUST00000142964.8 |
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| CDS TCA 72 bp | TTTCGGGAAAGCGGCGCTGGCATCTGGCCGACCTCATaGTATCCGGTCACTAGGGATCCTGCTCTGGCATTC | + |
|
Preference number: 6 (lower is better) Translates to: FRESGAGIWPTS*YPVTRDPALAF Trigger: GAATGCCAGAGCAGGATCCCTAGTGACCGGATATCATGAGGTCGGCCAGATGCCAGCGCCGCTTTCCCGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020528.14 ENSMUST00000138050.2 ENSMUST00000142964.8 |
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| CDS CCA 72 bp | GAGGAAAAGAGGTGGCCAGTGTTTGTCATGGAAGCCTaGAAACACTGTCCCAGAAATGCACGGGCTAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: EEKRWPVFVMEA*KHCPRNARARV Trigger: CACCCTAGCCCGTGCATTTCTGGGACAGTGTTTCCAGGCTTCCATGACAAACACTGGCCACCTCTTTTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138050.2 ENSMUST00000142964.8 |
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