Pregenerated sensors for MPEG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046805Ensembl transcript IDs: ENSMUST00000081035.9
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | AATGGAATTTGTATAAACCCCACCCGCTTCTCCTTCAAATGCCTGTaGGGTGACTCATGGGGAGGGCACTGTCAATCAACACCAAGTCCT | + |
Preference number: 1 (lower is better) Translates to: NGICINPTRFSFKCL*GDSWGGHCQSTPSP Trigger: AGGACTTGGTGTTGATTGACAGTGCCCTCCCCATGAGTCACCTCACAGGCATTTGAAGGAGAAGCGGGTGGGGTTTATACAAATTCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR GCA 90 bp | CAAATGGCTCCTTTAATTTCCTGGTGCAGAGGCCTAAGAAAATACTaGCAGGGTTGTAATAGCTGCTTTCTTCCTATGGCGACTGTCACT | + |
Preference number: 1 (lower is better) Translates to: QMAPLISWCRGLRKY*QGCNSCFLPMATVT Trigger: AGTGACAGTCGCCATAGGAAGAAAGCAGCTATTACAACCCTGGCAGTATTTTCTTAGGCCTCTGCACCAGGAAATTAAAGGAGCCATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR GCA 90 bp | CCTCTTCAGCTTACAAACTGGAAAGCCTTTCAAATTCAGACTAAATaGACCAAATCCAATTTCTCCCCCACCCCTCGTTCCACACACATG | + |
Preference number: 1 (lower is better) Translates to: PLQLTNWKAFQIQTK*TKSNFSPTPRSTHM Trigger: CATGTGTGTGGAACGAGGGGTGGGGGAGAAATTGGATTTGGTGCATTTAGTCTGAATTTGAAAGGCTTTCCAGTTTGTAAGCTGAAGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR TCA 90 bp | CAATCACGAGGCCTTCCAGATAACCCATGGAAGCCATCCTGGAACTaGAATACATATCATGGCCTTTTCCCAGCTAACTGTGACATAAAT | + |
Preference number: 1 (lower is better) Translates to: QSRGLPDNPWKPSWN*NTYHGLFPANCDIN Trigger: ATTTATGTCACAGTTAGCTGGGAAAAGGCCATGATATGTATTTCAGTTCCAGGATGGCTTCCATGGGTTATCTGGAAGGCCTCGTGATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR TCA 90 bp | AGACAAGGGGAAAGACTGTCCAGAGAGAGGAAGGAGTTACATTTTTaGCACATGAACGTGAAACCATACTGCTTGATCTGCCAAACTAGA | + |
Preference number: 1 (lower is better) Translates to: RQGERLSRERKELHF*HMNVKPYCLICQTR Trigger: TCTAGTTTGGCAGATCAAGCAGTATGGTTTCACGTTCATGTGTCAAAAATGTAACTCCTTCCTCTCTCTGGACAGTCTTTCCCCTTGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR TCA 90 bp | GCTGTAGAGGAATTTCCGTGTTGTAGAGAATTAAATTCTCAGATATaGAAATTGAGCAATACCCCAACTATTGCCAGTTGTCAATCACGA | + |
Preference number: 1 (lower is better) Translates to: AVEEFPCCRELNSQI*KLSNTPTIASCQSR Trigger: TCGTGATTGACAACTGGCAATAGTTGGGGTATTGCTCAATTTTCATATCTGAGAATTTAATTCTCTACAACACGGAAATTCCTCTACAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR TCA 90 bp | AAAAATTCAACAGGAAGTTTCTGCATTAAAGATCTGGGAGTCTTCTaGTGTGCCTTGCTTTGCAGATTCAGAGAATTTACAGAAAGAAGT | + |
Preference number: 1 (lower is better) Translates to: KNSTGSFCIKDLGVF*CALLCRFREFTERS Trigger: ACTTCTTTCTGTAAATTCTCTGAATCTGCAAAGCAAGGCACATCAGAAGACTCCCAGATCTTTAATGCAGAAACTTCCTGTTGAATTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR CAA 90 bp | CGCTCAAGAGGCAGGTTCGATGGAGAGGTTGTGCAATTAGCCCTCTaGGCTGGGCAGGTGGTAGGGCAGAATTCCAATTCAGTCATTCAT | + |
Preference number: 2 (lower is better) Translates to: RSRGRFDGEVVQLAL*AGQVVGQNSNSVIH Trigger: ATGAATGACTGAATTGGAATTCTGCCCTACCACCTGCCCAGCCAAGAGGGCTAATTGCACAACCTCTCCATCGAACCTGCCTCTTGAGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR-3UTR TCA 90 bp | TGTGGTAAGAAGACAAGGGGAAAGACTGTCCAGAGAGAGGAAGGAGTTACATTTCAAATGCCTGTGAGGTaGCTCATGGGGAGGGCACTG | + |
Preference number: 2 (lower is better) Translates to: CGKKTRGKTVQREEGVTFQMPVR*LMGRAL Trigger: CAGTGCCCTCCCCATGAGTCACCTCACAGGCATTTG...AAATGTAACTCCTTCCTCTCTCTGGACAGTCTTTCCCCTTGTCTTCTTACCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR-3UTR TCA 90 bp | ACACTTGGAGCTCTTCAGGAGGGCCTACTCTGTGCACAAGAGCTTGATTGTAAGAGCAAAAGATGTGCTTaGAGCTGTGGCTGGAAACTG | + |
Preference number: 2 (lower is better) Translates to: TLGALQEGLLCAQELDCKSKRCA*SCGWKL Trigger: CAGTTTCCAGCCACAGCTTCAAGCACATCTTTTGCT...CTTACAATCAAGCTCTTGTGCACAGAGTAGGCCCTCCTGAAGAGCTCCAAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR-3UTR CCA 90 bp | ACTAAATGCACCAAATCCAATTTCTCCCCCACCCCTCGTTCCACACACATGCATGCTGCTTTCTTCCTATaGCGACTGTCACTTCAGTCA | + |
Preference number: 2 (lower is better) Translates to: TKCTKSNFSPTPRSTHMHAAFFL*RLSLQS Trigger: TGACTGAAGTGACAGTCGCCATAGGAAGAAAGCAGC...ATGCATGTGTGTGGAACGAGGGGTGGGGGAGAAATTGGATTTGGTGCATTTAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR-3UTR TCA 90 bp | GCCCTCTTGGCTGGGCAGGTGGTAGGGCAGAATTCCAATTCAGTCATTCATTCCCTCAGATATGAAAATTaGGCAATACCCCAACTATTG | + |
Preference number: 2 (lower is better) Translates to: ALLAGQVVGQNSNSVIHSLRYEN*AIPQLL Trigger: CAATAGTTGGGGTATTGCTCAATTTTCATATCTGAG...GGAATGAATGACTGAATTGGAATTCTGCCCTACCACCTGCCCAGCCAAGAGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR-3UTR GCA 90 bp | ACTAAATGCACCAAATCCAATTTCTCCCCCACCCCTCGTTCCACACACATGCATCAGGGTTGTAATAGCTaGTTTCTTCCTATGGCGACT | + |
Preference number: 2 (lower is better) Translates to: TKCTKSNFSPTPRSTHMHQGCNS*FLPMAT Trigger: AGTCGCCATAGGAAGAAAGCAGCTATTACAACCCTG...ATGCATGTGTGTGGAACGAGGGGTGGGGGAGAAATTGGATTTGGTGCATTTAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR-3UTR GCA 90 bp | GCAATTAGCCCTCTTGGCTGGGCAGGTGGTAGGGCAGAATTCCAATTCAGTCATCCTTTAATTTCCTGGTaGAGAGGCCTAAGAAAATAC | + |
Preference number: 2 (lower is better) Translates to: AISPLGWAGGRAEFQFSHPLISW*RGLRKY Trigger: GTATTTTCTTAGGCCTCTGCACCAGGAAATTAAAGG...ATGACTGAATTGGAATTCTGCCCTACCACCTGCCCAGCCAAGAGGGCTAATTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR CAA 90 bp | AGACACTTGGAGCTCTTCAGGAGGGCCTACTCTGTGCACAAGAGCTaGATTGTAACTAGTATTTTCAGAAAGATGGCTGGCTTCAATGAA | + |
Preference number: 2 (lower is better) Translates to: RHLELFRRAYSVHKS*IVTSIFRKMAGFNE Trigger: TTCATTGAAGCCAGCCATCTTTCTGAAAATACTAGTTACAATCAAGCTCTTGTGCACAGAGTAGGCCCTCCTGAAGAGCTCCAAGTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR-3UTR TCA 90 bp | ACACTTGGAGCTCTTCAGGAGGGCCTACTCTGTGCACAAGAGCTTGATTGTAAGAAGGAGTTACATTTTTaGCACATGAACGTGAAACCA | + |
Preference number: 2 (lower is better) Translates to: TLGALQEGLLCAQELDCKKELHF*HMNVKP Trigger: TGGTTTCACGTTCATGTGTCAAAAATGTAACTCCTT...CTTACAATCAAGCTCTTGTGCACAGAGTAGGCCCTCCTGAAGAGCTCCAAGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR-3UTR GCA 90 bp | TGTGGTAAGAAGACAAGGGGAAAGACTGTCCAGAGAGAGGAAGGAGTTACATTTCTCGTTCCACACACATaGATTCAGGTACAGACAACT | + |
Preference number: 2 (lower is better) Translates to: CGKKTRGKTVQREEGVTFLVPHT*IQVQTT Trigger: AGTTGTCTGTACCTGAATGCATGTGTGTGGAACGAG...AAATGTAACTCCTTCCTCTCTCTGGACAGTCTTTCCCCTTGTCTTCTTACCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR-3UTR CCA 90 bp | TCATTGTCTCCCGAACCCCGGTTTTTAGCCTTAATTTATTACTCATTTCCTTACATGTGCTTGAAGCTGTaGCTGGAAACTGTTTCCTTT | + |
Preference number: 2 (lower is better) Translates to: SLSPEPRFLALIYYSFPYMCLKL*LETVSF Trigger: AAAGGAAACAGTTTCCAGCCACAGCTTCAAGCACAT...GTAAGGAAATGAGTAATAAATTAAGGCTAAAAACCGGGGTTCGGGAGACAATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR-3UTR CCA 90 bp | CTCTCATTGTCTCCCGAACCCCGGTTTTTAGCCTTAATTTATTACTCATTTCCTCTTCAGCTTACAAACTaGAAAGCCTTTCAAATTCAG | + |
Preference number: 2 (lower is better) Translates to: LSLSPEPRFLALIYYSFPLQLTN*KAFQIQ Trigger: CTGAATTTGAAAGGCTTTCCAGTTTGTAAGCTGAAG...AGGAAATGAGTAATAAATTAAGGCTAAAAACCGGGGTTCGGGAGACAATGAGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR TCA 72 bp | AAACCCCACCCGCTTCTCCTTCAAATGCCTGTGAGGTaGCTCATGGGGAGGGCACTGTCAATCAACACCAAG | + |
Preference number: 3 (lower is better) Translates to: KPHPLLLQMPVR*LMGRALSINTK Trigger: CTTGGTGTTGATTGACAGTGCCCTCCCCATGAGTCACCTCACAGGCATTTGAAGGAGAAGCGGGTGGGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR TCA 72 bp | AAACGAATGAGGAAGTCTCTCCCTGTTCCTGAAGGCTaGGACACTTGGAGCTCTTCAGGAGGGCCTACTCTG | + |
Preference number: 3 (lower is better) Translates to: KRMRKSLPVPEG*DTWSSSGGPTL Trigger: CAGAGTAGGCCCTCCTGAAGAGCTCCAAGTGTCTCAGCCTTCAGGAACAGGGAGAGACTTCCTCATTCGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR TCA 72 bp | CAAATGGAAACGAATGAGGAAGTCTCTCCCTGTTCCTaGAGGCTGAGACACTTGGAGCTCTTCAGGAGGGCC | + |
Preference number: 3 (lower is better) Translates to: QMETNEEVSPCS*RLRHLELFRRA Trigger: GGCCCTCCTGAAGAGCTCCAAGTGTCTCAGCCTTCAGGAACAGGGAGAGACTTCCTCATTCGTTTCCATTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR TCA 72 bp | TCAGAGAATTTACAGAAAGAAGTCTCTCCCCGTTCCTaGAGGCTGAGACACTTGGAGCTCTTCAGGAGGGCC | + |
Preference number: 3 (lower is better) Translates to: SENLQKEVSPRS*RLRHLELFRRA Trigger: GGCCCTCCTGAAGAGCTCCAAGTGTCTCAGCCTTCAGGAACGGGGAGAGACTTCTTTCTGTAAATTCTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR TCA 72 bp | CCCAGGACTTGTTTGCACAGTTCAGAAGCCCAAGACTaGCCTAGATTAGCTGTGAGGAAGTTGGGAAATGGA | + |
Preference number: 3 (lower is better) Translates to: PRTCLHSSEAQD*PRLAVRKLGNG Trigger: TCCATTTCCCAACTTCCTCACAGCTAATCTAGGTCAGTCTTGGGCTTCTGAACTGTGCAAACAAGTCCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR GCA 72 bp | AATCCAATTTCTCCCCCACCCCTCGTTCCACACACATaGATTCAGGTACAGACAACTATGAGAATGGACGCA | + |
Preference number: 3 (lower is better) Translates to: NPISPPPLVPHT*IQVQTTMRMDA Trigger: TGCGTCCATTCTCATAGTTGTCTGTACCTGAATGCATGTGTGTGGAACGAGGGGTGGGGGAGAAATTGGATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR CCA 72 bp | CCCCACACCTCACTTCAAATGGCTCCTTTAATTTCCTaGTGCAGAGGCCTAAGAAAATACTGCCAGGGTTGT | + |
Preference number: 3 (lower is better) Translates to: PHTSLQMAPLIS*CRGLRKYCQGC Trigger: ACAACCCTGGCAGTATTTTCTTAGGCCTCTGCACCAGGAAATTAAAGGAGCCATTTGAAGTGAGGTGTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR-3UTR CAA 90 bp | CTGTGGCATTTCAGGGCACTGTTTACTGAAACCCTGAGGGCCTCTTTGAAAACAAAGCAAAAGATGTGCTaGAAGCTGTGGCTGGAAACT | + |
Preference number: 3 (lower is better) Translates to: LWHFRALFTETLRASLKTKQKMC*KLWLET Trigger: AGTTTCCAGCCACAGCTTCAAGCACATCTTTTGCTT...TGTTTTCAAAGAGGCCCTCAGGGTTTCAGTAAACAGTGCCCTGAAATGCCACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR TCA 72 bp | TGTAGGCCTCCTGTGGCATTTCAGGGCACTGTTTACTaGAACCCTGAGGGCCTCTTTGAAAACACAAGAAAA | + |
Preference number: 3 (lower is better) Translates to: CRPPVAFQGTVY*NPEGLFENTRK Trigger: TTTTCTTGTGTTTTCAAAGAGGCCCTCAGGGTTTCAGTAAACAGTGCCCTGAAATGCCACAGGAGGCCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR TCA 72 bp | GGCCTTCCAGATAACCCATGGAAGCCATCCTGGAACTaGAATACATATCATGGCCTTTTCCCAGCTAACTGT | + |
Preference number: 3 (lower is better) Translates to: GLPDNPWKPSWN*NTYHGLFPANC Trigger: ACAGTTAGCTGGGAAAAGGCCATGATATGTATTTCAGTTCCAGGATGGCTTCCATGGGTTATCTGGAAGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR GCA 72 bp | AGAGGCCTAAGAAAATACTGCCAGGGTTGTAATAGCTaGTTTCTTCCTATGGCGACTGTCACTTCAGTCACT | + |
Preference number: 3 (lower is better) Translates to: RGLRKYCQGCNS*FLPMATVTSVT Trigger: AGTGACTGAAGTGACAGTCGCCATAGGAAGAAAGCAGCTATTACAACCCTGGCAGTATTTTCTTAGGCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR GCA 72 bp | CCTTTAATTTCCTGGTGCAGAGGCCTAAGAAAATACTaGCAGGGTTGTAATAGCTGCTTTCTTCCTATGGCG | + |
Preference number: 3 (lower is better) Translates to: PLISWCRGLRKY*QGCNSCFLPMA Trigger: CGCCATAGGAAGAAAGCAGCTATTACAACCCTGGCAGTATTTTCTTAGGCCTCTGCACCAGGAAATTAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR-3UTR CAA 90 bp | CCCAAACCCACAAAGCACACAGAGGTTAAGAAGAACATTTTAACGCTCAAGAGGGTTGGGAAATGGAATTaGTATAAACCCCACCCGCTT | + |
Preference number: 3 (lower is better) Translates to: PKPTKHTEVKKNILTLKRVGKWN*YKPHPL Trigger: AAGCGGGTGGGGTTTATACAAATTCCATTTCCCAAC...CCTCTTGAGCGTTAAAATGTTCTTCTTAACCTCTGTGTGCTTTGTGGGTTTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR TCA 72 bp | GAAAGACTGTCCAGAGAGAGGAAGGAGTTACATTTTTaGCACATGAACGTGAAACCATACTGCTTGATCTGC | + |
Preference number: 3 (lower is better) Translates to: ERLSRERKELHF*HMNVKPYCLIC Trigger: GCAGATCAAGCAGTATGGTTTCACGTTCATGTGTCAAAAATGTAACTCCTTCCTCTCTCTGGACAGTCTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR GCA 72 bp | TCTGCATTAAAGATCTGGGAGTCTTCTGATGTGCCTTaGTTTGCAGATTCAGAGAATTTACAGAAAGAAGTC | + |
Preference number: 3 (lower is better) Translates to: SALKIWESSDVP*FADSENLQKEV Trigger: GACTTCTTTCTGTAAATTCTCTGAATCTGCAAAGCAAGGCACATCAGAAGACTCCCAGATCTTTAATGCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR-3UTR CAA 90 bp | CTCTCATTGTCTCCCGAACCCCGGTTTTTAGCCTTAATTTATTACTCATTTCCTTTAGCTGTGAGGAAGTaGGGAAATGGAATTTGTATA | + |
Preference number: 3 (lower is better) Translates to: LSLSPEPRFLALIYYSFPLAVRK*GNGICI Trigger: TATACAAATTCCATTTCCCAACTTCCTCACAGCTAA...AGGAAATGAGTAATAAATTAAGGCTAAAAACCGGGGTTCGGGAGACAATGAGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR CCA 72 bp | ATGTACTTAAAGCACAGACCTCTTCAGCTTACAAACTaGAAAGCCTTTCAAATTCAGACTAAATGCACCAAA | + |
Preference number: 3 (lower is better) Translates to: MYLKHRPLQLTN*KAFQIQTKCTK Trigger: TTTGGTGCATTTAGTCTGAATTTGAAAGGCTTTCCAGTTTGTAAGCTGAAGAGGTCTGTGCTTTAAGTACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR TCA 90 bp | ACACTTGGAGCTCTTCAGGAGGGCCTACTCTGTGCACAAGAGCTTGATTGTAAGTATAAGGTGGGAGCCTaGCAGGGAGCAGGGACCCTC | + |
Preference number: 4 (lower is better) Translates to: TLGALQEGLLCAQELDCKYKVGA*QGAGTL Trigger: GAGGGTCCCTGCTCCCTGTCAGGCTCCCACCTTATA...CTTACAATCAAGCTCTTGTGCACAGAGTAGGCCCTCCTGAAGAGCTCCAAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR CAA 72 bp | GGCAGGTTCGATGGAGAGGTTGTGCAATTAGCCCTCTaGGCTGGGCAGGTGGTAGGGCAGAATTCCAATTCA | + |
Preference number: 4 (lower is better) Translates to: GRFDGEVVQLAL*AGQVVGQNSNS Trigger: TGAATTGGAATTCTGCCCTACCACCTGCCCAGCCAAGAGGGCTAATTGCACAACCTCTCCATCGAACCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR TCA 90 bp | GGCTGGGCAGGTGGTAGGGCAGAATTCCAATTCAGTCATTCATTCCTCTCTGTAAGCAGCTTCCCCTCCTaGCATTCCATTACTGTCCCC | + |
Preference number: 4 (lower is better) Translates to: GWAGGRAEFQFSHSFLSVSSFPS*HSITVP Trigger: GGGGACAGTAATGGAATGTCAGGAGGGGAAGCTGCT...TACAGAGAGGAATGAATGACTGAATTGGAATTCTGCCCTACCACCTGCCCAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR TCA 90 bp | GCAATTAGCCCTCTTGGCTGGGCAGGTGGTAGGGCAGAATTCCAATTCAGTCATTTCCACTGGTTGGTCTaGGGATCCTTAATCCAGGAT | + |
Preference number: 4 (lower is better) Translates to: AISPLGWAGGRAEFQFSHFHWLV*GSLIQD Trigger: ATCCTGGATTAAGGATCCTCAGACCAACCAGTGGAA...ATGACTGAATTGGAATTCTGCCCTACCACCTGCCCAGCCAAGAGGGCTAATTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR GCA 90 bp | AATGGCTCCTTTAATTTCCTGGTGCAGAGGCCTAAGAAAATACTGCCAGGGTTGATCCTCCTGAACCAGTaGAGCCCCAGCATCCACACT | + |
Preference number: 4 (lower is better) Translates to: NGSFNFLVQRPKKILPGLILLNQ*SPSIHT Trigger: AGTGTGGATGCTGGGGCTGCACTGGTTCAGGAGGAT...CAACCCTGGCAGTATTTTCTTAGGCCTCTGCACCAGGAAATTAAAGGAGCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR GCA 90 bp | GCCCTCTTGGCTGGGCAGGTGGTAGGGCAGAATTCCAATTCAGTCATTCATTCCCCAACCAAACTCTCCTaGTCCTCAATTTCCTGGTAT | + |
Preference number: 4 (lower is better) Translates to: ALLAGQVVGQNSNSVIHSPTKLS*SSISWY Trigger: ATACCAGGAAATTGAGGAGCAGGAGAGTTTGGTTGG...GGAATGAATGACTGAATTGGAATTCTGCCCTACCACCTGCCCAGCCAAGAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR CCA 90 bp | CTGTGGCATTTCAGGGCACTGTTTACTGAAACCCTGAGGGCCTCTTTGAAAACAGAGTTGTCAGGTACTTaGCCAGCAGCCACACACCAA | + |
Preference number: 4 (lower is better) Translates to: LWHFRALFTETLRASLKTELSGT*PAATHQ Trigger: TTGGTGTGTGGCTGCTGGCCAAGTACCTGACAACTC...TGTTTTCAAAGAGGCCCTCAGGGTTTCAGTAAACAGTGCCCTGAAATGCCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR TCA 90 bp | GGCTGGGCAGGTGGTAGGGCAGAATTCCAATTCAGTCATTCATTCCTCTCTGTAGCTTGGTCCTTTACTTaGAGGGTCTTCATCCTTTGG | + |
Preference number: 4 (lower is better) Translates to: GWAGGRAEFQFSHSFLSVAWSFT*RVFILW Trigger: CCAAAGGATGAAGACCCTTCAAGTAAAGGACCAAGC...TACAGAGAGGAATGAATGACTGAATTGGAATTCTGCCCTACCACCTGCCCAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR GCA 90 bp | TCCCCCACCCCTCGTTCCACACACATGCATTCAGGTACAGACAACTATGAGAATGGTTTAATGAAGAAATaGAGAGGCAAGCCAGCACGG | + |
Preference number: 4 (lower is better) Translates to: SPTPRSTHMHSGTDNYENGLMKK*RGKPAR Trigger: CCGTGCTGGCTTGCCTCTGCATTTCTTCATTAAACC...ATTCTCATAGTTGTCTGTACCTGAATGCATGTGTGTGGAACGAGGGGTGGGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR TCA 90 bp | CCCAAACCCACAAAGCACACAGAGGTTAAGAAGAACATTTTAACGCTCAAGAGGCGTGTGTGCCATAGTTaGGGATCAAGAGCTCTGCCA | + |
Preference number: 4 (lower is better) Translates to: PKPTKHTEVKKNILTLKRRVCHS*GSRALP Trigger: TGGCAGAGCTCTTGATCCTCAACTATGGCACACACG...CCTCTTGAGCGTTAAAATGTTCTTCTTAACCTCTGTGTGCTTTGTGGGTTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR TCA 90 bp | TGTGGTAAGAAGACAAGGGGAAAGACTGTCCAGAGAGAGGAAGGAGTTACATTTCAGCCTTGGCCACTCTaGACACATCTTCACACACTG | + |
Preference number: 4 (lower is better) Translates to: CGKKTRGKTVQREEGVTFQPWPL*THLHTL Trigger: CAGTGTGTGAAGATGTGTTCAGAGTGGCCAAGGCTG...AAATGTAACTCCTTCCTCTCTCTGGACAGTCTTTCCCCTTGTCTTCTTACCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR TCA 90 bp | ACTAAATGCACCAAATCCAATTTCTCCCCCACCCCTCGTTCCACACACATGCATCACTATTGGTCACTATaGCAGTGTTGGTGGCAACCT | + |
Preference number: 4 (lower is better) Translates to: TKCTKSNFSPTPRSTHMHHYWSL*QCWWQP Trigger: AGGTTGCCACCAACACTGTCATAGTGACCAATAGTG...ATGCATGTGTGTGGAACGAGGGGTGGGGGAGAAATTGGATTTGGTGCATTTAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR TCA 90 bp | AGGGGAAAGACTGTCCAGAGAGAGGAAGGAGTTACATTTTTGACACATGAACGTTACTGTCCCCATGGATaGCTGTCATGGCCCTACGAA | + |
Preference number: 4 (lower is better) Translates to: RGKTVQREEGVTFLTHERYCPHG*LSWPYE Trigger: TTCGTAGGGCCATGACAGTCATCCATGGGGACAGTA...ACGTTCATGTGTCAAAAATGTAACTCCTTCCTCTCTCTGGACAGTCTTTCCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR GCA 90 bp | GCTGGGCAGGTGGTAGGGCAGAATTCCAATTCAGTCATTCATTCCTCTCTGTATGTGAGCAGGTTCTTCTaGTCCAGGTTTTGGCAAAGA | + |
Preference number: 4 (lower is better) Translates to: AGQVVGQNSNSVIHSSLYVSRFF*SRFWQR Trigger: TCTTTGCCAAAACCTGGAGCAGAAGAACCTGCTCAC...ATACAGAGAGGAATGAATGACTGAATTGGAATTCTGCCCTACCACCTGCCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR CCA 90 bp | ACTAAATGCACCAAATCCAATTTCTCCCCCACCCCTCGTTCCACACACATGCATGTGTTCTGGCTATTCTaGTTGTCCAGAAGGAAGGAG | + |
Preference number: 4 (lower is better) Translates to: TKCTKSNFSPTPRSTHMHVFWLF*LSRRKE Trigger: CTCCTTCCTTCTGGACAACCAGAATAGCCAGAACAC...ATGCATGTGTGTGGAACGAGGGGTGGGGGAGAAATTGGATTTGGTGCATTTAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR CCA 90 bp | CTCTCATTGTCTCCCGAACCCCGGTTTTTAGCCTTAATTTATTACTCATTTCCTCCCTCTTCATGGGTCTaGGAGAGCAGATGGACAGGG | + |
Preference number: 4 (lower is better) Translates to: LSLSPEPRFLALIYYSFPPSSWV*ESRWTG Trigger: CCCTGTCCATCTGCTCTCCCAGACCCATGAAGAGGG...AGGAAATGAGTAATAAATTAAGGCTAAAAACCGGGGTTCGGGAGACAATGAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR CCA 90 bp | GCCCTCTTGGCTGGGCAGGTGGTAGGGCAGAATTCCAATTCAGTCATTCATTCCTGCTCCTCAATTTCCTaGTATTCCTTCTTCTTGTAC | + |
Preference number: 4 (lower is better) Translates to: ALLAGQVVGQNSNSVIHSCSSIS*YSFFLY Trigger: GTACAAGAAGAAGGAATACCAGGAAATTGAGGAGCA...GGAATGAATGACTGAATTGGAATTCTGCCCTACCACCTGCCCAGCCAAGAGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR CCA 90 bp | AGAAAATACTGCCAGGGTTGTAATAGCTGCTTTCTTCCTATGGCGACTGTCACTCCATTACTGTCCCCATaGATGACTGTCATGGCCCTA | + |
Preference number: 4 (lower is better) Translates to: RKYCQGCNSCFLPMATVTPLLSP*MTVMAL Trigger: TAGGGCCATGACAGTCATCCATGGGGACAGTAATGG...AGTGACAGTCGCCATAGGAAGAAAGCAGCTATTACAACCCTGGCAGTATTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR TCA 90 bp | ACACTTGGAGCTCTTCAGGAGGGCCTACTCTGTGCACAAGAGCTTGATTGTAAGTGTGTTGATAGAAAGTaGGGTGGTACTCTGGTAATT | + |
Preference number: 4 (lower is better) Translates to: TLGALQEGLLCAQELDCKCVDRK*GGTLVI Trigger: AATTACCAGAGTACCACCTCACTTTCTATCAACACA...CTTACAATCAAGCTCTTGTGCACAGAGTAGGCCCTCCTGAAGAGCTCCAAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR TCA 90 bp | AGAAAATACTGCCAGGGTTGTAATAGCTGCTTTCTTCCTATGGCGACTGTCACTGGGACACACATACCTTaGGGCTTTCAAACAGGTTCA | + |
Preference number: 4 (lower is better) Translates to: RKYCQGCNSCFLPMATVTGTHIP*GFQTGS Trigger: TGAACCTGTTTGAAAGCCTCAAGGTATGTGTGTCCC...AGTGACAGTCGCCATAGGAAGAAAGCAGCTATTACAACCCTGGCAGTATTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR GCA 90 bp | AATGGCTCCTTTAATTTCCTGGTGCAGAGGCCTAAGAAAATACTGCCAGGGTTGACAGATGTCCATAAGTaGCTTCGTAAACCCCAAGCT | + |
Preference number: 4 (lower is better) Translates to: NGSFNFLVQRPKKILPGLTDVHK*LRKPQA Trigger: AGCTTGGGGTTTACGAAGGCACTTATGGACATCTGT...CAACCCTGGCAGTATTTTCTTAGGCCTCTGCACCAGGAAATTAAAGGAGCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR CCA 90 bp | ACTAAATGCACCAAATCCAATTTCTCCCCCACCCCTCGTTCCACACACATGCATCTGTGGTCTTACAGTTaGTGTATGTCAAGTCCATCA | + |
Preference number: 4 (lower is better) Translates to: TKCTKSNFSPTPRSTHMHLWSYS*CMSSPS Trigger: TGATGGACTTGACATACACCAACTGTAAGACCACAG...ATGCATGTGTGTGGAACGAGGGGTGGGGGAGAAATTGGATTTGGTGCATTTAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR CCA 90 bp | TCATTGTCTCCCGAACCCCGGTTTTTAGCCTTAATTTATTACTCATTTCCTTACATAACAGCTAGGTGTTaGCTGAAGCCCCCGGGACAC | + |
Preference number: 4 (lower is better) Translates to: SLSPEPRFLALIYYSFPYITARC*LKPPGH Trigger: GTGTCCCGGGGGCTTCAGCCAACACCTAGCTGTTAT...GTAAGGAAATGAGTAATAAATTAAGGCTAAAAACCGGGGTTCGGGAGACAATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR CCA 90 bp | CCCACAAAGCACACAGAGGTTAAGAAGAACATTTTAACGCTCAAGAGGCAGGTTCTGGCTCATAAGAGGTaGTTTGGTATAAGGTGGGAG | + |
Preference number: 4 (lower is better) Translates to: PTKHTEVKKNILTLKRQVLAHKR*FGIRWE Trigger: CTCCCACCTTATACCAAACCACCTCTTATGAGCCAG...AACCTGCCTCTTGAGCGTTAAAATGTTCTTCTTAACCTCTGTGTGCTTTGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR TCA 90 bp | AATGGCTCCTTTAATTTCCTGGTGCAGAGGCCTAAGAAAATACTGCCAGGGTTGGCATTCTTGCATATTTaGAATCCAGTGGTACCCGTT | + |
Preference number: 4 (lower is better) Translates to: NGSFNFLVQRPKKILPGLAFLHI*NPVVPV Trigger: AACGGGTACCACTGGATTTCAAATATGCAAGAATGC...CAACCCTGGCAGTATTTTCTTAGGCCTCTGCACCAGGAAATTAAAGGAGCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR TCA 90 bp | ACTAAATGCACCAAATCCAATTTCTCCCCCACCCCTCGTTCCACACACATGCATAGGTTGCTCTCTTTCTaGGGAATAGTATACACTTCA | + |
Preference number: 4 (lower is better) Translates to: TKCTKSNFSPTPRSTHMHRLLSF*GIVYTS Trigger: TGAAGTGTATACTATTCCTCAGAAAGAGAGCAACCT...ATGCATGTGTGTGGAACGAGGGGTGGGGGAGAAATTGGATTTGGTGCATTTAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR GCA 90 bp | CCCAAACCCACAAAGCACACAGAGGTTAAGAAGAACATTTTAACGCTCAAGAGGTCCAAGAGGCTTGTCTaGTTCAGCACACGCTATTAT | + |
Preference number: 4 (lower is better) Translates to: PKPTKHTEVKKNILTLKRSKRLV*FSTRYY Trigger: ATAATAGCGTGTGCTGAAGCAGACAAGCCTCTTGGA...CCTCTTGAGCGTTAAAATGTTCTTCTTAACCTCTGTGTGCTTTGTGGGTTTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR GCA 90 bp | CTGTGGCATTTCAGGGCACTGTTTACTGAAACCCTGAGGGCCTCTTTGAAAACAGTTTCAGGGCATTCTTaGATATTTGAAATCCAGTGG | + |
Preference number: 4 (lower is better) Translates to: LWHFRALFTETLRASLKTVSGHS*IFEIQW Trigger: CCACTGGATTTCAAATATGCAAGAATGCCCTGAAAC...TGTTTTCAAAGAGGCCCTCAGGGTTTCAGTAAACAGTGCCCTGAAATGCCACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR GCA 90 bp | CCCAAACCCACAAAGCACACAGAGGTTAAGAAGAACATTTTAACGCTCAAGAGGCACCTGACAGTTCAGTaGATTCCTGATAAACTCCAC | + |
Preference number: 4 (lower is better) Translates to: PKPTKHTEVKKNILTLKRHLTVQ*IPDKLH Trigger: GTGGAGTTTATCAGGAATGCACTGAACTGTCAGGTG...CCTCTTGAGCGTTAAAATGTTCTTCTTAACCTCTGTGTGCTTTGTGGGTTTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR CCA 90 bp | CTGTGGCATTTCAGGGCACTGTTTACTGAAACCCTGAGGGCCTCTTTGAAAACAATATTTGAAATCCAGTaGTACCCGTTTCTCCAAGAG | + |
Preference number: 4 (lower is better) Translates to: LWHFRALFTETLRASLKTIFEIQ*YPFLQE Trigger: CTCTTGGAGAAACGGGTACCACTGGATTTCAAATAT...TGTTTTCAAAGAGGCCCTCAGGGTTTCAGTAAACAGTGCCCTGAAATGCCACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR CCA 90 bp | CCCACAAAGCACACAGAGGTTAAGAAGAACATTTTAACGCTCAAGAGGCAGGTTACTGCCCATCTTCTGTaGTCTTACAGTTGGTGTATG | + |
Preference number: 4 (lower is better) Translates to: PTKHTEVKKNILTLKRQVTAHLL*SYSWCM Trigger: CATACACCAACTGTAAGACCACAGAAGATGGGCAGT...AACCTGCCTCTTGAGCGTTAAAATGTTCTTCTTAACCTCTGTGTGCTTTGTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR CCA 90 bp | CCCACAAAGCACACAGAGGTTAAGAAGAACATTTTAACGCTCAAGAGGCAGGTTTTCTGCTCCAGGTTTTaGCAAAGAACATCACCTGAC | + |
Preference number: 4 (lower is better) Translates to: PTKHTEVKKNILTLKRQVFCSRF*QRTSPD Trigger: GTCAGGTGATGTTCTTTGCCAAAACCTGGAGCAGAA...AACCTGCCTCTTGAGCGTTAAAATGTTCTTCTTAACCTCTGTGTGCTTTGTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR TCA 90 bp | CTGTGGCATTTCAGGGCACTGTTTACTGAAACCCTGAGGGCCTCTTTGAAAACATCATCCATATTGGCTTaGAAATTAAAGTTGGGGGAA | + |
Preference number: 4 (lower is better) Translates to: LWHFRALFTETLRASLKTSSILA*KLKLGE Trigger: TTCCCCCAACTTTAATTTTCAAGCCAATATGGATGA...TGTTTTCAAAGAGGCCCTCAGGGTTTCAGTAAACAGTGCCCTGAAATGCCACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR GCA 90 bp | TGTGGTAAGAAGACAAGGGGAAAGACTGTCCAGAGAGAGGAAGGAGTTACATTTCTTTTTCAGAGATGGTaGTCTGACGTCTTTAGCTGT | + |
Preference number: 4 (lower is better) Translates to: CGKKTRGKTVQREEGVTFLFQRW*SDVFSC Trigger: ACAGCTAAAGACGTCAGAGCACCATCTCTGAAAAAG...AAATGTAACTCCTTCCTCTCTCTGGACAGTCTTTCCCCTTGTCTTCTTACCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR CAA 72 bp | GGAAAGACTGTCCAGAGAGAGGAAGGAGTTACATTTTaGACACATGAACGTGAAACCATACTGCTTGATCTG | + |
Preference number: 4 (lower is better) Translates to: GKTVQREEGVTF*THERETILLDL Trigger: CAGATCAAGCAGTATGGTTTCACGTTCATGTGTCAAAAATGTAACTCCTTCCTCTCTCTGGACAGTCTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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3UTR CAA 72 bp | GAGCTCTTCAGGAGGGCCTACTCTGTGCACAAGAGCTaGATTGTAAGTGTTAAAGCAAGAATACATCATCTT | + |
Preference number: 4 (lower is better) Translates to: ELFRRAYSVHKS*IVSVKARIHHL Trigger: AAGATGATGTATTCTTGCTTTAACACTTACAATCAAGCTCTTGTGCACAGAGTAGGCCCTCCTGAAGAGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR CCA 90 bp | TCATTGTCTCCCGAACCCCGGTTTTTAGCCTTAATTTATTACTCATTTCCTTACGCTCTGAAGTTGGGGTaGTTTTCACTGTGTAGATCC | + |
Preference number: 4 (lower is better) Translates to: SLSPEPRFLALIYYSFPYALKLG*FSLCRS Trigger: GGATCTACACAGTGAAAACCACCCCAACTTCAGAGC...GTAAGGAAATGAGTAATAAATTAAGGCTAAAAACCGGGGTTCGGGAGACAATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR CCA 90 bp | CCTCTTCAGCTTACAAACTGGAAAGCCTTTCAAATTCAGACTAAATGCACCAAAAGGGTCTTCATCCTTTaGAACTCAGTAGAGAACTTG | + |
Preference number: 4 (lower is better) Translates to: PLQLTNWKAFQIQTKCTKRVFIL*NSVENL Trigger: CAAGTTCTCTACTGAGTTCCAAAGGATGAAGACCCT...TTTGGTGCATTTAGTCTGAATTTGAAAGGCTTTCCAGTTTGTAAGCTGAAGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR CCA 90 bp | TCATTGTCTCCCGAACCCCGGTTTTTAGCCTTAATTTATTACTCATTTCCTTACAGTCCTTCGTCAAACTaGTCTGAGAAATGTAGTCTG | + |
Preference number: 4 (lower is better) Translates to: SLSPEPRFLALIYYSFPYSPSSN*SEKCSL Trigger: CAGACTACATTTCTCAGACCAGTTTGACGAAGGACT...GTAAGGAAATGAGTAATAAATTAAGGCTAAAAACCGGGGTTCGGGAGACAATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR CAA 90 bp | TCCCCCACCCCTCGTTCCACACACATGCATTCAGGTACAGACAACTATGAGAATCCACCAAAGGTGAAGTaGGTGACTTTCGCATCACAG | + |
Preference number: 5 (lower is better) Translates to: SPTPRSTHMHSGTDNYENPPKVK*VTFASQ Trigger: CTGTGATGCGAAAGTCACCAACTTCACCTTTGGTGG...ATTCTCATAGTTGTCTGTACCTGAATGCATGTGTGTGGAACGAGGGGTGGGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR CAA 90 bp | GCAATTAGCCCTCTTGGCTGGGCAGGTGGTAGGGCAGAATTCCAATTCAGTCATTCTTCACACACTGTCTaGCAGAAAATCTTGAGGGTG | + |
Preference number: 5 (lower is better) Translates to: AISPLGWAGGRAEFQFSHSSHTV*QKILRV Trigger: CACCCTCAAGATTTTCTGCAAGACAGTGTGTGAAGA...ATGACTGAATTGGAATTCTGCCCTACCACCTGCCCAGCCAAGAGGGCTAATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS TCA 90 bp | GGTAGGACCTCCAAGACAGGTAGTTTCAGGGCATTCTTGCATATTTaGAATCCAGTGGTACCCGTTTCTCCAAGAGGCTTGTCTGCTTCA | + |
Preference number: 5 (lower is better) Translates to: GRTSKTGSFRAFLHI*NPVVPVSPRGLSAS Trigger: TGAAGCAGACAAGCCTCTTGGAGAAACGGGTACCACTGGATTTCAAATATGCAAGAATGCCCTGAAACTACCTGTCTTGGAGGTCCTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS GCA 90 bp | GCATATTTGAAATCCAGTGGTACCCGTTTCTCCAAGAGGCTTGTCTaGTTCAGCACACGCTATTATCATCCAGATGAGGACCAAGGCCAT | + |
Preference number: 5 (lower is better) Translates to: AYLKSSGTRFSKRLV*FSTRYYHPDEDQGH Trigger: ATGGCCTTGGTCCTCATCTGGATGATAATAGCGTGTGCTGAAGCAGACAAGCCTCTTGGAGAAACGGGTACCACTGGATTTCAAATATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR CAA 90 bp | GCAATTAGCCCTCTTGGCTGGGCAGGTGGTAGGGCAGAATTCCAATTCAGTCATAAGGGTCTTCATCCTTaGGAACTCAGTAGAGAACTT | + |
Preference number: 5 (lower is better) Translates to: AISPLGWAGGRAEFQFSHKGLHP*ELSREL Trigger: AAGTTCTCTACTGAGTTCCAAAGGATGAAGACCCTT...ATGACTGAATTGGAATTCTGCCCTACCACCTGCCCAGCCAAGAGGGCTAATTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR CAA 90 bp | CTGTGGCATTTCAGGGCACTGTTTACTGAAACCCTGAGGGCCTCTTTGAAAACATCTGTGGTCTTACAGTaGGTGTATGTCAAGTCCATC | + |
Preference number: 5 (lower is better) Translates to: LWHFRALFTETLRASLKTSVVLQ*VYVKSI Trigger: GATGGACTTGACATACACCAACTGTAAGACCACAGA...TGTTTTCAAAGAGGCCCTCAGGGTTTCAGTAAACAGTGCCCTGAAATGCCACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR CAA 90 bp | CTGTGGCATTTCAGGGCACTGTTTACTGAAACCCTGAGGGCCTCTTTGAAAACAAGCTTGGTCCTTTACTaGAAGGGTCTTCATCCTTTG | + |
Preference number: 5 (lower is better) Translates to: LWHFRALFTETLRASLKTSLVLY*KGLHPL Trigger: CAAAGGATGAAGACCCTTCAAGTAAAGGACCAAGCT...TGTTTTCAAAGAGGCCCTCAGGGTTTCAGTAAACAGTGCCCTGAAATGCCACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR CAA 90 bp | TGTGGTAAGAAGACAAGGGGAAAGACTGTCCAGAGAGAGGAAGGAGTTACATTTTTCTGGCTATTCTGGTaGTCCAGAAGGAAGGAGGAC | + |
Preference number: 5 (lower is better) Translates to: CGKKTRGKTVQREEGVTFFWLFW*SRRKED Trigger: GTCCTCCTTCCTTCTGGACAACCAGAATAGCCAGAA...AAATGTAACTCCTTCCTCTCTCTGGACAGTCTTTCCCCTTGTCTTCTTACCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR CAA 90 bp | AATGGCTCCTTTAATTTCCTGGTGCAGAGGCCTAAGAAAATACTGCCAGGGTTGGACACAGTAGGACACTaGGCATCCATCACTGATAAC | + |
Preference number: 5 (lower is better) Translates to: NGSFNFLVQRPKKILPGLDTVGH*ASITDN Trigger: GTTATCAGTGATGGATGCCAAGTGTCCTACTGTGTC...CAACCCTGGCAGTATTTTCTTAGGCCTCTGCACCAGGAAATTAAAGGAGCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR CAA 90 bp | AGAAAATACTGCCAGGGTTGTAATAGCTGCTTTCTTCCTATGGCGACTGTCACTGTCACTATGACAGTGTaGGTGGCAACCTGGCTCATA | + |
Preference number: 5 (lower is better) Translates to: RKYCQGCNSCFLPMATVTVTMTV*VATWLI Trigger: TATGAGCCAGGTTGCCACCAACACTGTCATAGTGAC...AGTGACAGTCGCCATAGGAAGAAAGCAGCTATTACAACCCTGGCAGTATTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR CAA 90 bp | GCAATTAGCCCTCTTGGCTGGGCAGGTGGTAGGGCAGAATTCCAATTCAGTCATGTCTTGCAGAAAATCTaGAGGGTGCATTTCTTTTTA | + |
Preference number: 5 (lower is better) Translates to: AISPLGWAGGRAEFQFSHVLQKI*RVHFFL Trigger: TAAAAAGAAATGCACCCTCAAGATTTTCTGCAAGAC...ATGACTGAATTGGAATTCTGCCCTACCACCTGCCCAGCCAAGAGGGCTAATTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR CAA 90 bp | AGAAAATACTGCCAGGGTTGTAATAGCTGCTTTCTTCCTATGGCGACTGTCACTGGCAAGCCAGGTAGCTaGTCAGGTTTAATGAAGAAA | + |
Preference number: 5 (lower is better) Translates to: RKYCQGCNSCFLPMATVTGKPGS*SGLMKK Trigger: TTTCTTCATTAAACCTGACAAGCTACCTGGCTTGCC...AGTGACAGTCGCCATAGGAAGAAAGCAGCTATTACAACCCTGGCAGTATTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR CAA 90 bp | ACACTTGGAGCTCTTCAGGAGGGCCTACTCTGTGCACAAGAGCTTGATTGTAAGATCATCCATATTGGCTaGAAAATTAAAGTTGGGGGA | + |
Preference number: 5 (lower is better) Translates to: TLGALQEGLLCAQELDCKIIHIG*KIKVGG Trigger: TCCCCCAACTTTAATTTTCAAGCCAATATGGATGAT...CTTACAATCAAGCTCTTGTGCACAGAGTAGGCCCTCCTGAAGAGCTCCAAGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS GCA 90 bp | TTAAGGACTGTTGCATCTGTTGCTAAGCTTCCAACCAAACTCTCCTaGTCCTCAATTTCCTGGTATTCCTTCTTCTTGTACTTCCGAGTA | + |
Preference number: 5 (lower is better) Translates to: LRTVASVAKLPTKLS*SSISWYSFFLYFRV Trigger: TACTCGGAAGTACAAGAAGAAGGAATACCAGGAAATTGAGGAGCAGGAGAGTTTGGTTGGAAGCTTAGCAACAGATGCAACAGTCCTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR CAA 90 bp | CCTCTTCAGCTTACAAACTGGAAAGCCTTTCAAATTCAGACTAAATGCACCAAAGCCCTAAATTCAGCCTaGGCCACTCTGAACACATCT | + |
Preference number: 5 (lower is better) Translates to: PLQLTNWKAFQIQTKCTKALNSA*ATLNTS Trigger: AGATGTGTTCAGAGTGGCCAAGGCTGAATTTAGGGC...TTTGGTGCATTTAGTCTGAATTTGAAAGGCTTTCCAGTTTGTAAGCTGAAGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR CAA 90 bp | CTCTCATTGTCTCCCGAACCCCGGTTTTTAGCCTTAATTTATTACTCATTTCCTATAGGGTTGATGGTCTaGTCAGTGAAGACTCCTCCA | + |
Preference number: 5 (lower is better) Translates to: LSLSPEPRFLALIYYSFPIGLMV*SVKTPP Trigger: TGGAGGAGTCTTCACTGACAAGACCATCAACCCTAT...AGGAAATGAGTAATAAATTAAGGCTAAAAACCGGGGTTCGGGAGACAATGAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS TCA 90 bp | AGTCCTTCGTCAAACTGGTCTGAGAAATGTAGTCTGTTTCAACTTTaGAGTTCACAATGTTTAAGAAGGCAATCCCTGCAGAAGCGGTCA | + |
Preference number: 5 (lower is better) Translates to: SPSSNWSEKCSLFQL*SSQCLRRQSLQKRS Trigger: TGACCGCTTCTGCAGGGATTGCCTTCTTAAACATTGTGAACTTCAAAGTTGAAACAGACTACATTTCTCAGACCAGTTTGACGAAGGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS-3UTR CAA 90 bp | CCTCTTCAGCTTACAAACTGGAAAGCCTTTCAAATTCAGACTAAATGCACCAAAAGGGCGAGTTCTGTGTaGATAGAAAGTGAGGTGGTA | + |
Preference number: 5 (lower is better) Translates to: PLQLTNWKAFQIQTKCTKRASSV*IESEVV Trigger: TACCACCTCACTTTCTATCAACACAGAACTCGCCCT...TTTGGTGCATTTAGTCTGAATTTGAAAGGCTTTCCAGTTTGTAAGCTGAAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS CCA 72 bp | TGCAGAGGCAAGCCAGCACGGTCTATTGCCACTAGGTaGTTAGTGATGCCCTTCTGCCAGGTTTCTAAGGTG | + |
Preference number: 6 (lower is better) Translates to: CRGKPARSIATR*LVMPFCQVSKV Trigger: CACCTTAGAAACCTGGCAGAAGGGCATCACTAACCACCTAGTGGCAATAGACCGTGCTGGCTTGCCTCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS GCA 72 bp | AAGGAAGGAGGACCTTACGTGATCCTCCTGAACCAGTaGAGCCCCAGCATCCACACTAGTGATTACGTGTGT | + |
Preference number: 6 (lower is better) Translates to: KEGGPYVILLNQ*SPSIHTSDYVC Trigger: ACACACGTAATCACTAGTGTGGATGCTGGGGCTGCACTGGTTCAGGAGGATCACGTAAGGTCCTCCTTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS GCA 72 bp | GGCAAGCCAGGTAGCTTGTCAGGTTTAATGAAGAAATaGAGAGGCAAGCCAGCACGGTCTATTGCCACTAGG | + |
Preference number: 6 (lower is better) Translates to: GKPGSLSGLMKK*RGKPARSIATR Trigger: CCTAGTGGCAATAGACCGTGCTGGCTTGCCTCTGCATTTCTTCATTAAACCTGACAAGCTACCTGGCTTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS CAA 90 bp | CCTGGTAGTCACAGCTTGGTCCTTTACTTGAAGGGTCTTCATCCTTaGGAACTCAGTAGAGAACTTGCCGTTGACTCTGGAGAAAAGGGC | + |
Preference number: 6 (lower is better) Translates to: PGSHSLVLYLKGLHP*ELSRELAVDSGEKG Trigger: GCCCTTTTCTCCAGAGTCAACGGCAAGTTCTCTACTGAGTTCCAAAGGATGAAGACCCTTCAAGTAAAGGACCAAGCTGTGACTACCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS GCA 72 bp | AAATCCAGTGGTACCCGTTTCTCCAAGAGGCTTGTCTaGTTCAGCACACGCTATTATCATCCAGATGAGGAC | + |
Preference number: 6 (lower is better) Translates to: KSSGTRFSKRLV*FSTRYYHPDED Trigger: GTCCTCATCTGGATGATAATAGCGTGTGCTGAAGCAGACAAGCCTCTTGGAGAAACGGGTACCACTGGATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS TCA 72 bp | TCTGGAGAAAAGGGCGAGTTCTGTGTTGATAGAAAGTaGGGTGGTACTCTGGTAATTCATCCAGGACTCCAG | + |
Preference number: 6 (lower is better) Translates to: SGEKGEFCVDRK*GGTLVIHPGLQ Trigger: CTGGAGTCCTGGATGAATTACCAGAGTACCACCTCACTTTCTATCAACACAGAACTCGCCCTTTTCTCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS CAA 72 bp | CACAGCTTGGTCCTTTACTTGAAGGGTCTTCATCCTTaGGAACTCAGTAGAGAACTTGCCGTTGACTCTGGA | + |
Preference number: 6 (lower is better) Translates to: HSLVLYLKGLHP*ELSRELAVDSG Trigger: TCCAGAGTCAACGGCAAGTTCTCTACTGAGTTCCAAAGGATGAAGACCCTTCAAGTAAAGGACCAAGCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS TCA 72 bp | TCCAAGACAGGTAGTTTCAGGGCATTCTTGCATATTTaGAATCCAGTGGTACCCGTTTCTCCAAGAGGCTTG | + |
Preference number: 6 (lower is better) Translates to: SKTGSFRAFLHI*NPVVPVSPRGL Trigger: CAAGCCTCTTGGAGAAACGGGTACCACTGGATTTCAAATATGCAAGAATGCCCTGAAACTACCTGTCTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS CAA 72 bp | TACCTGAACCCTGGTAGTCACAGCTTGGTCCTTTACTaGAAGGGTCTTCATCCTTTGGAACTCAGTAGAGAA | + |
Preference number: 6 (lower is better) Translates to: YLNPGSHSLVLY*KGLHPLELSRE Trigger: TTCTCTACTGAGTTCCAAAGGATGAAGACCCTTCAAGTAAAGGACCAAGCTGTGACTACCAGGGTTCAGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS CAA 90 bp | GAAGTTGGTGACTTTCGCATCACAGGAATCATCATCCATATTGGCTaGAAAATTAAAGTTGGGGGAATCAACATTTGTGCATCCTGGGTG | + |
Preference number: 6 (lower is better) Translates to: EVGDFRITGIIIHIG*KIKVGGINICASWV Trigger: CACCCAGGATGCACAAATGTTGATTCCCCCAACTTTAATTTTCAAGCCAATATGGATGATGATTCCTGTGATGCGAAAGTCACCAACTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS TCA 72 bp | TCAAACTGGTCTGAGAAATGTAGTCTGTTTCAACTTTaGAGTTCACAATGTTTAAGAAGGCAATCCCTGCAG | + |
Preference number: 6 (lower is better) Translates to: SNWSEKCSLFQL*SSQCLRRQSLQ Trigger: CTGCAGGGATTGCCTTCTTAAACATTGTGAACTTCAAAGTTGAAACAGACTACATTTCTCAGACCAGTTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS CAA 72 bp | GACTTTCGCATCACAGGAATCATCATCCATATTGGCTaGAAAATTAAAGTTGGGGGAATCAACATTTGTGCA | + |
Preference number: 6 (lower is better) Translates to: DFRITGIIIHIG*KIKVGGINICA Trigger: TGCACAAATGTTGATTCCCCCAACTTTAATTTTCAAGCCAATATGGATGATGATTCCTGTGATGCGAAAGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |
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CDS TCA 72 bp | ACTTTCGCATCACAGGAATCATCATCCATATTGGCTTaGAAATTAAAGTTGGGGGAATCAACATTTGTGCAT | + |
Preference number: 6 (lower is better) Translates to: TFASQESSSILA*KLKLGESTFVH Trigger: ATGCACAAATGTTGATTCCCCCAACTTTAATTTTCAAGCCAATATGGATGATGATTCCTGTGATGCGAAAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081035.9 |