Pregenerated sensors for MOXD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029885Ensembl transcript IDs: ENSMUST00000031937.4
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGCCCAGCCCGCGATGACGTGGGAGCAGAGAGAGAAGGCAGGGTCTaGTCCATAGCATTCGCCGATGCCTGTGGGGAGCACACTAGAATT | + |
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Preference number: 5 (lower is better) Translates to: SPARDDVGAEREGRV*SIAFADACGEHTRI Trigger: AATTCTAGTGTGCTCCCCACAGGCATCGGCGAATGCTATGGATCAGACCCTGCCTTCTCTCTCTGCTCCCACGTCATCGCGGGCTGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS TCA 90 bp | GAGAGGGCCAGTGGTACAGCCCTGAAGCCTGCCGGGGTATTGTCCTaGGGTTCCACCTTGCCTCCAGTAGACTCTAAGCATGGTCCTCGA | + |
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Preference number: 5 (lower is better) Translates to: ERASGTALKPAGVLS*GSTLPPVDSKHGPR Trigger: TCGAGGACCATGCTTAGAGTCTACTGGAGGCAAGGTGGAACCTCAGGACAATACCCCGGCAGGCTTCAGGGCTGTACCACTGGCCCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS GCA 90 bp | AGCAGTATTGGAGCCAGAGAGGGCCAGTGGTACAGCCCTGAAGCCTaGCGGGGTATTGTCCTGAGGTTCCACCTTGCCTCCAGTAGACTC | + |
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Preference number: 5 (lower is better) Translates to: SSIGAREGQWYSPEA*RGIVLRFHLASSRL Trigger: GAGTCTACTGGAGGCAAGGTGGAACCTCAGGACAATACCCCGGCAGGCTTCAGGGCTGTACCACTGGCCCTCTCTGGCTCCAATACTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS CCA 90 bp | CCACTGAGGGTCAAAGGGGGTTCCAATAGAGATGCCCACATCATCTaGAAACTGGTAACTAAGGCCCCCGACAGCCCAGCCCGCGATGAC | + |
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Preference number: 5 (lower is better) Translates to: PLRVKGGSNRDAHII*KLVTKAPDSPARDD Trigger: GTCATCGCGGGCTGGGCTGTCGGGGGCCTTAGTTACCAGTTTCCAGATGATGTGGGCATCTCTATTGGAACCCCCTTTGACCCTCAGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS CCA 90 bp | GGCAGCCAGGACCCTCATGGTATCACTCGTAATGTCACGATCATGTaGATCACAGGTTCTGAAAGGCCTGGAAAAGCGCATGGTGGTCGA | + |
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Preference number: 5 (lower is better) Translates to: GSQDPHGITRNVTIM*ITGSERPGKAHGGR Trigger: TCGACCACCATGCGCTTTTCCAGGCCTTTCAGAACCTGTGATCCACATGATCGTGACATTACGAGTGATACCATGAGGGTCCTGGCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS GCA 90 bp | ATAGCATTCGCCGATGCCTGTGGGGAGCACACTAGAATTGCCACATaGATACACGAGAACGTGATGCACCATCGTCTCATTGCGTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: IAFADACGEHTRIAT*IHENVMHHRLIAFH Trigger: GTGGAACGCAATGAGACGATGGTGCATCACGTTCTCGTGTATGCATGTGGCAATTCTAGTGTGCTCCCCACAGGCATCGGCGAATGCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS TCA 90 bp | CAAGAAAGCCTCTGCACCCGGGGGTATAAAGTGAATAGGGAAAACTaGGATGCCCAGCTGGAGGACTCCCATGTCATATTTGCGAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: QESLCTRGYKVNREN*DAQLEDSHVIFAKV Trigger: CACCTTCGCAAATATGACATGGGAGTCCTCCAGCTGGGCATCTCAGTTTTCCCTATTCACTTTATACCCCCGGGTGCAGAGGCTTTCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS GCA 90 bp | TTACATACTACTTGGAGTTGGGTTCCATTTCTGTATTGCAGAGCTTaGAGTGACCGCCCAGCTAAGTGGGTGTGGAGCAGGCAGGCTGAT | + |
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Preference number: 5 (lower is better) Translates to: LHTTWSWVPFLYCRA*SDRPAKWVWSRQAD Trigger: ATCAGCCTGCCTGCTCCACACCCACTTAGCTGGGCGGTCACTGCAAGCTCTGCAATACAGAAATGGAACCCAACTCCAAGTAGTATGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS CCA 90 bp | AAGCAAGAAGATGGACTTGACAAAAGTATGCTCCCGACTCATCTTTaGTATGTCATCCGGGCCATAGGCAGCCAGGACCCTCATGGTATC | + |
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Preference number: 5 (lower is better) Translates to: KQEDGLDKSMLPTHL*YVIRAIGSQDPHGI Trigger: GATACCATGAGGGTCCTGGCTGCCTATGGCCCGGATGACATACCAAAGATGAGTCGGGAGCATACTTTTGTCAAGTCCATCTTCTTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS TCA 90 bp | CCTGTGGGGAGCACACTAGAATTGCCACATGCATACACGAGAACGTaGTGCACCATCGTCTCATTGCGTTCCACCAATATAGGTTCAAAC | + |
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Preference number: 5 (lower is better) Translates to: PVGSTLELPHAYTRT*CTIVSLRSTNIGSN Trigger: GTTTGAACCTATATTGGTGGAACGCAATGAGACGATGGTGCATCACGTTCTCGTGTATGCATGTGGCAATTCTAGTGTGCTCCCCACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS TCA 90 bp | CATGTCATATTTGCGAAGGTGCGAGGTGTAGAACAGCCGCATCCCTaGGGTATCACGGATACCAGGAAGGTTCTGAAAATTGCTGTAGTG | + |
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Preference number: 5 (lower is better) Translates to: HVIFAKVRGVEQPHP*GITDTRKVLKIAVV Trigger: CACTACAGCAATTTTCAGAACCTTCCTGGTATCCGTGATACCTCAGGGATGCGGCTGTTCTACACCTCGCACCTTCGCAAATATGACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS TCA 90 bp | CCACTCCACATTATCCAGGACCATCAGGTTCTCCATGGGATTCTCTaGTGCTTCTTCCCCCAGCTCATTGGTCACATAGATGATATCAGG | + |
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Preference number: 5 (lower is better) Translates to: PLHIIQDHQVLHGIL*CFFPQLIGHIDDIR Trigger: CCTGATATCATCTATGTGACCAATGAGCTGGGGGAAGAAGCATCAGAGAATCCCATGGAGAACCTGATGGTCCTGGATAATGTGGAGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS CCA 90 bp | GTTCCATTTCTGTATTGCAGAGCTTGCAGTGACCGCCCAGCTAAGTaGGTGTGGAGCAGGCAGGCTGATATATATATGTCAGATACTGGA | + |
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Preference number: 5 (lower is better) Translates to: VPFLYCRACSDRPAK*VWSRQADIYMSDTG Trigger: TCCAGTATCTGACATATATATATCAGCCTGCCTGCTCCACACCCACTTAGCTGGGCGGTCACTGCAAGCTCTGCAATACAGAAATGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS GCA 90 bp | CTAGAGTGTCTTCATCCAGAAGGTGCTGATCCGAAAAGTAGACATTaGCATTGGGTAGGACTCCTCCAACTACCAGATCACTTCCCACAA | + |
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Preference number: 5 (lower is better) Translates to: LECLHPEGADPKSRH*HWVGLLQLPDHFPQ Trigger: TTGTGGGAAGTGATCTGGTAGTTGGAGGAGTCCTACCCAATGGCAATGTCTACTTTTCGGATCAGCACCTTCTGGATGAAGACACTCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS GCA 90 bp | GAAAAATCTTTACATACTACTTGGAGTTGGGTTCCATTTCTGTATTaGAGAGCTTGCAGTGACCGCCCAGCTAAGTGGGTGTGGAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: EKSLHTTWSWVPFLY*RACSDRPAKWVWSR Trigger: CCTGCTCCACACCCACTTAGCTGGGCGGTCACTGCAAGCTCTGCAATACAGAAATGGAACCCAACTCCAAGTAGTATGTAAAGATTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS CCA 90 bp | TGTCTTCATCCAGAAGGTGCTGATCCGAAAAGTAGACATTGCCATTaGGTAGGACTCCTCCAACTACCAGATCACTTCCCACAAAGGTGT | + |
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Preference number: 5 (lower is better) Translates to: CLHPEGADPKSRHCH*VGLLQLPDHFPQRC Trigger: ACACCTTTGTGGGAAGTGATCTGGTAGTTGGAGGAGTCCTACCCAATGGCAATGTCTACTTTTCGGATCAGCACCTTCTGGATGAAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS TCA 90 bp | CAGGAATCCAACCTGTTGTATTTTCTACTTCTTCATCAATGGTCTTaGTCAATACTGTCTGCTGGGACTCCTTGCAGGCTTTCTCAGCTT | + |
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Preference number: 5 (lower is better) Translates to: QESNLLYFLLLHQWS*SILSAGTPCRLSQL Trigger: AAGCTGAGAAAGCCTGCAAGGAGTCCCAGCAGACAGTATTGATCAAGACCATTGATGAAGAAGTAGAAAATACAACAGGTTGGATTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS TCA 90 bp | CATCTTGATCATCATATTGTAGCATTTGAAGCAAGAAGATGGACTTaGCAAAAGTATGCTCCCGACTCATCTTTGGTATGTCATCCGGGC | + |
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Preference number: 5 (lower is better) Translates to: HLDHHIVAFEARRWT*QKYAPDSSLVCHPG Trigger: GCCCGGATGACATACCAAAGATGAGTCGGGAGCATACTTTTGTCAAGTCCATCTTCTTGCTTCAAATGCTACAATATGATGATCAAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS CCA 90 bp | AATAGGGAGTGGGAGAAAGGTACAGGCATATGTGGTATCATCCTCTaGAATGATGAAATTACTGATCTTCAAGTCATGGATGATGGTGTC | + |
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Preference number: 5 (lower is better) Translates to: NREWEKGTGICGIIL*NDEITDLQVMDDGV Trigger: GACACCATCATCCATGACTTGAAGATCAGTAATTTCATCATTCCAGAGGATGATACCACATATGCCTGTACCTTTCTCCCACTCCCTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS GCA 72 bp | GGAGCCAGAGAGGGCCAGTGGTACAGCCCTGAAGCCTaGCGGGGTATTGTCCTGAGGTTCCACCTTGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: GAREGQWYSPEA*RGIVLRFHLAS Trigger: GGAGGCAAGGTGGAACCTCAGGACAATACCCCGGCAGGCTTCAGGGCTGTACCACTGGCCCTCTCTGGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS TCA 72 bp | CGCGATGACGTGGGAGCAGAGAGAGAAGGCAGGGTCTaGTCCATAGCATTCGCCGATGCCTGTGGGGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: RDDVGAEREGRV*SIAFADACGEH Trigger: GTGCTCCCCACAGGCATCGGCGAATGCTATGGATCAGACCCTGCCTTCTCTCTCTGCTCCCACGTCATCGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS CAA 90 bp | AGGAACAGTACAGCAATCATGGGCAGGGGCCTCAGAGTAGCAGTATaGGAGCCAGAGAGGGCCAGTGGTACAGCCCTGAAGCCTGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: RNSTAIMGRGLRVAV*EPERASGTALKPAG Trigger: CCCGGCAGGCTTCAGGGCTGTACCACTGGCCCTCTCTGGCTCCAATACTGCTACTCTGAGGCCCCTGCCCATGATTGCTGTACTGTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS GCA 72 bp | GTCTGCAGCATTGCAAGGAGACACGAGAGGCTACCCTaGAGGAACAGTACAGCAATCATGGGCAGGGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: VCSIARRHERLP*RNSTAIMGRGL Trigger: GAGGCCCCTGCCCATGATTGCTGTACTGTTCCTGCAGGGTAGCCTCTCGTGTCTCCTTGCAATGCTGCAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS CAA 72 bp | ACAGCAATCATGGGCAGGGGCCTCAGAGTAGCAGTATaGGAGCCAGAGAGGGCCAGTGGTACAGCCCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: TAIMGRGLRVAV*EPERASGTALK Trigger: CTTCAGGGCTGTACCACTGGCCCTCTCTGGCTCCAATACTGCTACTCTGAGGCCCCTGCCCATGATTGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS GCA 72 bp | CTGAGATGCCCAGCTGGAGGACTCCCATGTCATATTTaGGAAGGTGCGAGGTGTAGAACAGCCGCATCCCTG | + |
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Preference number: 6 (lower is better) Translates to: LRCPAGGLPCHI*EGARCRTAASL Trigger: CAGGGATGCGGCTGTTCTACACCTCGCACCTTCGCAAATATGACATGGGAGTCCTCCAGCTGGGCATCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS TCA 72 bp | AGTGGTACAGCCCTGAAGCCTGCCGGGGTATTGTCCTaGGGTTCCACCTTGCCTCCAGTAGACTCTAAGCAT | + |
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Preference number: 6 (lower is better) Translates to: SGTALKPAGVLS*GSTLPPVDSKH Trigger: ATGCTTAGAGTCTACTGGAGGCAAGGTGGAACCTCAGGACAATACCCCGGCAGGCTTCAGGGCTGTACCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS TCA 72 bp | TGGAAAAGCGCATGGTGGTCGAGACAGCATCTTCTGTaGGCCTTAGGAGTTCAGCATCCTGGCTCCCATCCT | + |
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Preference number: 6 (lower is better) Translates to: WKSAWWSRQHLL*ALGVQHPGSHP Trigger: AGGATGGGAGCCAGGATGCTGAACTCCTAAGGCTCACAGAAGATGCTGTCTCGACCACCATGCGCTTTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS CAA 72 bp | CCGGTCTGTGATGCCCAGGCCAACCCAGCCAGTTGTTaGGACTTGGAGCTCAAATGTGATTATCTCAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: PVCDAQANPASC*DLELKCDYLSL Trigger: GAGGCTGAGATAATCACATTTGAGCTCCAAGTCCAAACAACTGGCTGGGTTGGCCTGGGCATCACAGACCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS GCA 72 bp | GCCGATGCCTGTGGGGAGCACACTAGAATTGCCACATaGATACACGAGAACGTGATGCACCATCGTCTCATT | + |
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Preference number: 6 (lower is better) Translates to: ADACGEHTRIAT*IHENVMHHRLI Trigger: AATGAGACGATGGTGCATCACGTTCTCGTGTATGCATGTGGCAATTCTAGTGTGCTCCCCACAGGCATCGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS CCA 72 bp | GATGGACTTGACAAAAGTATGCTCCCGACTCATCTTTaGTATGTCATCCGGGCCATAGGCAGCCAGGACCCT | + |
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Preference number: 6 (lower is better) Translates to: DGLDKSMLPTHL*YVIRAIGSQDP Trigger: AGGGTCCTGGCTGCCTATGGCCCGGATGACATACCAAAGATGAGTCGGGAGCATACTTTTGTCAAGTCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS CAA 90 bp | GTACCGGTCTGTGATGCCCAGGCCAACCCAGCCAGTTGTTTGGACTaGGAGCTCAAATGTGATTATCTCAGCCTCATAGTCAAAGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: VPVCDAQANPASCLD*ELKCDYLSLIVKVP Trigger: TGGGACTTTGACTATGAGGCTGAGATAATCACATTTGAGCTCCAAGTCCAAACAACTGGCTGGGTTGGCCTGGGCATCACAGACCGGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS CCA 72 bp | TGCAGAGCTTGCAGTGACCGCCCAGCTAAGTGGGTGTaGAGCAGGCAGGCTGATATATATATGTCAGATACT | + |
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Preference number: 6 (lower is better) Translates to: CRACSDRPAKWV*SRQADIYMSDT Trigger: AGTATCTGACATATATATATCAGCCTGCCTGCTCCACACCCACTTAGCTGGGCGGTCACTGCAAGCTCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS TCA 72 bp | CTCTGCACCCGGGGGTATAAAGTGAATAGGGAAAACTaGGATGCCCAGCTGGAGGACTCCCATGTCATATTT | + |
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Preference number: 6 (lower is better) Translates to: LCTRGYKVNREN*DAQLEDSHVIF Trigger: AAATATGACATGGGAGTCCTCCAGCTGGGCATCTCAGTTTTCCCTATTCACTTTATACCCCCGGGTGCAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS CCA 72 bp | CCAGAAGGTGCTGATCCGAAAAGTAGACATTGCCATTaGGTAGGACTCCTCCAACTACCAGATCACTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: PEGADPKSRHCH*VGLLQLPDHFP Trigger: TGGGAAGTGATCTGGTAGTTGGAGGAGTCCTACCCAATGGCAATGTCTACTTTTCGGATCAGCACCTTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS CAA 72 bp | TGTGATGCCCAGGCCAACCCAGCCAGTTGTTTGGACTaGGAGCTCAAATGTGATTATCTCAGCCTCATAGTC | + |
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Preference number: 6 (lower is better) Translates to: CDAQANPASCLD*ELKCDYLSLIV Trigger: GACTATGAGGCTGAGATAATCACATTTGAGCTCCAAGTCCAAACAACTGGCTGGGTTGGCCTGGGCATCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS CAA 90 bp | AAAGGTGTACCGGTCTGTGATGCCCAGGCCAACCCAGCCAGTTGTTaGGACTTGGAGCTCAAATGTGATTATCTCAGCCTCATAGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: KGVPVCDAQANPASC*DLELKCDYLSLIVK Trigger: TTTGACTATGAGGCTGAGATAATCACATTTGAGCTCCAAGTCCAAACAACTGGCTGGGTTGGCCTGGGCATCACAGACCGGTACACCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS TCA 72 bp | ATCAGCAGTTCATCCCCCGGCTTAATCACCACAGGATaGGGTAAGTCCCGAGACTCTTGCAGATTGAAATCA | + |
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Preference number: 6 (lower is better) Translates to: ISSSSPGLITTG*GKSRDSCRLKS Trigger: TGATTTCAATCTGCAAGAGTCTCGGGACTTACCTCATCCTGTGGTGATTAAGCCGGGGGATGAACTGCTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS GCA 72 bp | CTTCATCCAGAAGGTGCTGATCCGAAAAGTAGACATTaGCATTGGGTAGGACTCCTCCAACTACCAGATCAC | + |
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Preference number: 6 (lower is better) Translates to: LHPEGADPKSRH*HWVGLLQLPDH Trigger: GTGATCTGGTAGTTGGAGGAGTCCTACCCAATGGCAATGTCTACTTTTCGGATCAGCACCTTCTGGATGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS CCA 72 bp | GACCCTCATGGTATCACTCGTAATGTCACGATCATGTaGATCACAGGTTCTGAAAGGCCTGGAAAAGCGCAT | + |
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Preference number: 6 (lower is better) Translates to: DPHGITRNVTIM*ITGSERPGKAH Trigger: ATGCGCTTTTCCAGGCCTTTCAGAACCTGTGATCCACATGATCGTGACATTACGAGTGATACCATGAGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS TCA 72 bp | ATTATCCAGGACCATCAGGTTCTCCATGGGATTCTCTaGTGCTTCTTCCCCCAGCTCATTGGTCACATAGAT | + |
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Preference number: 6 (lower is better) Translates to: IIQDHQVLHGIL*CFFPQLIGHID Trigger: ATCTATGTGACCAATGAGCTGGGGGAAGAAGCATCAGAGAATCCCATGGAGAACCTGATGGTCCTGGATAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS CAA 90 bp | ACTTCTTCATCAATGGTCTTGATCAATACTGTCTGCTGGGACTCCTaGCAGGCTTTCTCAGCTTTCTTAATGTTCTCTGGAGTCCACTCC | + |
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Preference number: 6 (lower is better) Translates to: TSSSMVLINTVCWDS*QAFSAFLMFSGVHS Trigger: GGAGTGGACTCCAGAGAACATTAAGAAAGCTGAGAAAGCCTGCAAGGAGTCCCAGCAGACAGTATTGATCAAGACCATTGATGAAGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS CAA 72 bp | TCAATGGTCTTGATCAATACTGTCTGCTGGGACTCCTaGCAGGCTTTCTCAGCTTTCTTAATGTTCTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: SMVLINTVCWDS*QAFSAFLMFSG Trigger: TCCAGAGAACATTAAGAAAGCTGAGAAAGCCTGCAAGGAGTCCCAGCAGACAGTATTGATCAAGACCATTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS CAA 90 bp | TCAGGAATCCAACCTGTTGTATTTTCTACTTCTTCATCAATGGTCTaGATCAATACTGTCTGCTGGGACTCCTTGCAGGCTTTCTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SGIQPVVFSTSSSMV*INTVCWDSLQAFSA Trigger: AGCTGAGAAAGCCTGCAAGGAGTCCCAGCAGACAGTATTGATCAAGACCATTGATGAAGAAGTAGAAAATACAACAGGTTGGATTCCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS GCA 72 bp | TCTACTTCTTCATCAATGGTCTTGATCAATACTGTCTaGTGGGACTCCTTGCAGGCTTTCTCAGCTTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: STSSSMVLINTV*WDSLQAFSAFL Trigger: TAAGAAAGCTGAGAAAGCCTGCAAGGAGTCCCAGCAGACAGTATTGATCAAGACCATTGATGAAGAAGTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS CCA 72 bp | ACTTCTTCATCAATGGTCTTGATCAATACTGTCTGCTaGGACTCCTTGCAGGCTTTCTCAGCTTTCTTAATG | + |
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Preference number: 6 (lower is better) Translates to: TSSSMVLINTVC*DSLQAFSAFLM Trigger: CATTAAGAAAGCTGAGAAAGCCTGCAAGGAGTCCCAGCAGACAGTATTGATCAAGACCATTGATGAAGAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS CAA 72 bp | CAACCTGTTGTATTTTCTACTTCTTCATCAATGGTCTaGATCAATACTGTCTGCTGGGACTCCTTGCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: QPVVFSTSSSMV*INTVCWDSLQA Trigger: AGCCTGCAAGGAGTCCCAGCAGACAGTATTGATCAAGACCATTGATGAAGAAGTAGAAAATACAACAGGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS TCA 72 bp | AACCTGTTGTATTTTCTACTTCTTCATCAATGGTCTTaGTCAATACTGTCTGCTGGGACTCCTTGCAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: NLLYFLLLHQWS*SILSAGTPCRL Trigger: AAGCCTGCAAGGAGTCCCAGCAGACAGTATTGATCAAGACCATTGATGAAGAAGTAGAAAATACAACAGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS TCA 72 bp | CCACAGGATGAGGTAAGTCCCGAGACTCTTGCAGATTaGAATCATAGGAAAAATCTTTACATACTACTTGGA | + |
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Preference number: 6 (lower is better) Translates to: PQDEVSPETLAD*NHRKNLYILLG Trigger: TCCAAGTAGTATGTAAAGATTTTTCCTATGATTTCAATCTGCAAGAGTCTCGGGACTTACCTCATCCTGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS CCA 72 bp | TGGGAGAAAGGTACAGGCATATGTGGTATCATCCTCTaGAATGATGAAATTACTGATCTTCAAGTCATGGAT | + |
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Preference number: 6 (lower is better) Translates to: WEKGTGICGIIL*NDEITDLQVMD Trigger: ATCCATGACTTGAAGATCAGTAATTTCATCATTCCAGAGGATGATACCACATATGCCTGTACCTTTCTCCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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| CDS CAA 72 bp | CAGATTGAAATCATAGGAAAAATCTTTACATACTACTaGGAGTTGGGTTCCATTTCTGTATTGCAGAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: QIEIIGKIFTYY*ELGSISVLQSL Trigger: CAAGCTCTGCAATACAGAAATGGAACCCAACTCCAAGTAGTATGTAAAGATTTTTCCTATGATTTCAATCTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031937.4 |
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