Pregenerated sensors for MOXD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020000Ensembl transcript IDs: ENSMUST00000095784.3
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACCACAGGGACTGGGACCTGTCGAAGAGAGGGCTATGCTCACCCTaGCGAGTTACACCCAGAAAGGATGAAGAGCAAATGGGATCGGAG | + |
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Preference number: 1 (lower is better) Translates to: NHRDWDLSKRGLCSP*RVTPRKDEEQMGSE Trigger: CTCCGATCCCATTTGCTCTTCATCCTTTCTGGGTGTAACTCGCCAGGGTGAGCATAGCCCTCTCTTCGACAGGTCCCAGTCCCTGTGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| 3UTR GCA 90 bp | AATCAGAGAAACCACAGGGACTGGGACCTGTCGAAGAGAGGGCTATaGTCACCCTGGCGAGTTACACCCAGAAAGGATGAAGAGCAAATG | + |
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Preference number: 1 (lower is better) Translates to: NQRNHRDWDLSKRGL*SPWRVTPRKDEEQM Trigger: CATTTGCTCTTCATCCTTTCTGGGTGTAACTCGCCAGGGTGAGCATAGCCCTCTCTTCGACAGGTCCCAGTCCCTGTGGTTTCTCTGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| 3UTR CCA 90 bp | GGCTGGACAGTGCTAGAAAGACTGGGAAATACTTTGATGTGGGCTTaGGTATCAACAGACTTGGTGGATGGAGGAAGCCAAAGATGCAGA | + |
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Preference number: 1 (lower is better) Translates to: GWTVLERLGNTLMWA*VSTDLVDGGSQRCR Trigger: TCTGCATCTTTGGCTTCCTCCATCCACCAAGTCTGTTGATACCCAAGCCCACATCAAAGTATTTCCCAGTCTTTCTAGCACTGTCCAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| 3UTR GCA 90 bp | CATGGCTTAGGTAGCCTGGGAAGGAAAACAGAAAGAACTTGTGTGTaGAGAAATTTAAGTGTCCAGGCTCTTCGTACCCACCCATCTCTC | + |
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Preference number: 1 (lower is better) Translates to: HGLGSLGRKTERTCV*RNLSVQALRTHPSL Trigger: GAGAGATGGGTGGGTACGAAGAGCCTGGACACTTAAATTTCTGCACACACAAGTTCTTTCTGTTTTCCTTCCCAGGCTACCTAAGCCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| 3UTR TCA 90 bp | ATACACGGAACATCAACTTTGGTCGAGAAACCCAGAGAACCACAGTaGCATGGCTTAGGTAGCCTGGGAAGGAAAACAGAAAGAACTTGT | + |
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Preference number: 1 (lower is better) Translates to: IHGTSTLVEKPREPQ*HGLGSLGRKTERTC Trigger: ACAAGTTCTTTCTGTTTTCCTTCCCAGGCTACCTAAGCCATGTCACTGTGGTTCTCTGGGTTTCTCGACCAAAGTTGATGTTCCGTGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| 3UTR-3UTR GCA 90 bp | GCTCACCCTGGCGAGTTACACCCAGAAAGGATGAAGAGCAAATGGGATCGGAGAGCTTTCCACTTGATGTaGTGGCTTGCTAAGTGGATA | + |
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Preference number: 2 (lower is better) Translates to: AHPGELHPERMKSKWDRRAFHLM*WLAKWI Trigger: TATCCACTTAGCAAGCCAGCACATCAAGTGGAAAGC...TCTCCGATCCCATTTGCTCTTCATCCTTTCTGGGTGTAACTCGCCAGGGTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| 3UTR-3UTR GCA 90 bp | GCTCACCCTGGCGAGTTACACCCAGAAAGGATGAAGAGCAAATGGGATCGGAGAGAAAGAACTTGTGTGTaGAGAAATTTAAGTGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: AHPGELHPERMKSKWDRRERTCV*RNLSVQ Trigger: CTGGACACTTAAATTTCTGCACACACAAGTTCTTTC...TCTCCGATCCCATTTGCTCTTCATCCTTTCTGGGTGTAACTCGCCAGGGTGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| 3UTR-3UTR TCA 90 bp | AAATACTTTGATGTGGGCTTGGGTATCAACAGACTTGGTGGATGGAGGAAGCCATCTTTGCTTTCCACTTaGTGTGCTGGCTTGCTAAGT | + |
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Preference number: 2 (lower is better) Translates to: KYFDVGLGINRLGGWRKPSLLST*CAGLLS Trigger: ACTTAGCAAGCCAGCACATCAAGTGGAAAGCAAAGA...TGGCTTCCTCCATCCACCAAGTCTGTTGATACCCAAGCCCACATCAAAGTATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| 3UTR-3UTR CCA 90 bp | AGTTTCTCGGCTGATTTTATTGACATCAGTACACAACAACTTGATTCTCTCATGACCTTACAGACCCTGTaGCCCTGCCTCCTGTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: SFSADFIDISTQQLDSLMTLQTL*PCLLSW Trigger: CCAAGACAGGAGGCAGGGCCACAGGGTCTGTAAGGT...CATGAGAGAATCAAGTTGTTGTGTACTGATGTCAATAAAATCAGCCGAGAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| 3UTR-3UTR TCA 90 bp | AGTTTCTCGGCTGATTTTATTGACATCAGTACACAACAACTTGATTCTCTCATGTACACCCAGAAAGGATaGAGAGCAAATGGGATCGGA | + |
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Preference number: 2 (lower is better) Translates to: SFSADFIDISTQQLDSLMYTQKG*RANGIG Trigger: TCCGATCCCATTTGCTCTTCATCCTTTCTGGGTGTA...CATGAGAGAATCAAGTTGTTGTGTACTGATGTCAATAAAATCAGCCGAGAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| 3UTR-3UTR CCA 90 bp | GCAGATAATACAAAGAGAACCAAAAGAATAAGACCTTCAGTTGGTGGCAGTTTTAACAGACTTGGTGGATaGAGGAAGCCAAAGATGCAG | + |
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Preference number: 2 (lower is better) Translates to: ADNTKRTKRIRPSVGGSFNRLGG*RKPKMQ Trigger: CTGCATCTTTGGCTTCCTCCATCCACCAAGTCTGTT...AAAACTGCCACCAACTGAAGGTCTTATTCTTTTGGTTCTCTTTGTATTATCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| 3UTR-3UTR CCA 90 bp | AGTTTCTCGGCTGATTTTATTGACATCAGTACACAACAACTTGATTCTCTCATGTATCAACAGACTTGGTaGATGGAGGAAGCCAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: SFSADFIDISTQQLDSLMYQQTW*MEEAKD Trigger: ATCTTTGGCTTCCTCCATCCACCAAGTCTGTTGATA...CATGAGAGAATCAAGTTGTTGTGTACTGATGTCAATAAAATCAGCCGAGAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| 3UTR CCA 72 bp | GACTGGGACCTGTCGAAGAGAGGGCTATGCTCACCCTaGCGAGTTACACCCAGAAAGGATGAAGAGCAAATG | + |
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Preference number: 3 (lower is better) Translates to: DWDLSKRGLCSP*RVTPRKDEEQM Trigger: CATTTGCTCTTCATCCTTTCTGGGTGTAACTCGCCAGGGTGAGCATAGCCCTCTCTTCGACAGGTCCCAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| 3UTR CCA 72 bp | CCTGGCGAGTTACACCCAGAAAGGATGAAGAGCAAATaGGATCGGAGAGTAAGTCCACTAGTGTTATTAAGG | + |
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Preference number: 3 (lower is better) Translates to: PGELHPERMKSK*DRRVSPLVLLR Trigger: CCTTAATAACACTAGTGGACTTACTCTCCGATCCCATTTGCTCTTCATCCTTTCTGGGTGTAACTCGCCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| 3UTR CCA 72 bp | GTGCTAGAAAGACTGGGAAATACTTTGATGTGGGCTTaGGTATCAACAGACTTGGTGGATGGAGGAAGCCAA | + |
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Preference number: 3 (lower is better) Translates to: VLERLGNTLMWA*VSTDLVDGGSQ Trigger: TTGGCTTCCTCCATCCACCAAGTCTGTTGATACCCAAGCCCACATCAAAGTATTTCCCAGTCTTTCTAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| 3UTR TCA 72 bp | AAAGATGCAGAGATAAACACTGAGGTCAGAGGACCATaGGTAAAATCAGAGAAACCACAGGGACTGGGACCT | + |
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Preference number: 3 (lower is better) Translates to: KDAEINTEVRGP*VKSEKPQGLGP Trigger: AGGTCCCAGTCCCTGTGGTTTCTCTGATTTTACTCATGGTCCTCTGACCTCAGTGTTTATCTCTGCATCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| 3UTR TCA 72 bp | GTGGATGGAGGAAGCCAAAGATGCAGAGATAAACACTaGGGTCAGAGGACCATGAGTAAAATCAGAGAAACC | + |
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Preference number: 3 (lower is better) Translates to: VDGGSQRCRDKH*GQRTMSKIRET Trigger: GGTTTCTCTGATTTTACTCATGGTCCTCTGACCTCAGTGTTTATCTCTGCATCTTTGGCTTCCTCCATCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| 3UTR-3UTR CAA 90 bp | AAATACTTTGATGTGGGCTTGGGTATCAACAGACTTGGTGGATGGAGGAAGCCAATGTTGAGTGTCATGTaGAAATCACATGGAATTCTG | + |
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Preference number: 3 (lower is better) Translates to: KYFDVGLGINRLGGWRKPMLSVM*KSHGIL Trigger: CAGAATTCCATGTGATTTCAACATGACACTCAACAT...TGGCTTCCTCCATCCACCAAGTCTGTTGATACCCAAGCCCACATCAAAGTATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| 3UTR CCA 72 bp | CTCTTTGCTTTCCACTTGATGTGCTGGCTTGCTAAGTaGATAAACCAGGTCCATTTTTATTCTACTAATCAT | + |
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Preference number: 3 (lower is better) Translates to: LFAFHLMCWLAK*INQVHFYSTNH Trigger: ATGATTAGTAGAATAAAAATGGACCTGGTTTATCCACTTAGCAAGCCAGCACATCAAGTGGAAAGCAAAGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR GCA 90 bp | TGCTCACCCTGGCGAGTTACACCCAGAAAGGATGAAGAGCAAATGGGATCGGAGCCCTGCCGGCCCCAGTaGAGCCAGTACTTGCCTTCG | + |
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Preference number: 4 (lower is better) Translates to: CSPWRVTPRKDEEQMGSEPCRPQ*SQYLPS Trigger: CGAAGGCAAGTACTGGCTGCACTGGGGCCGGCAGGG...CTCCGATCCCATTTGCTCTTCATCCTTTCTGGGTGTAACTCGCCAGGGTGAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| 3UTR CAA 72 bp | AGGAACCTTACAGACCCTGTGGCCCTGCCTCCTGTCTaGGGGATCTCACCCCATCTAGAACCCTTCACTGCT | + |
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Preference number: 4 (lower is better) Translates to: RNLTDPVALPPV*GISPHLEPFTA Trigger: AGCAGTGAAGGGTTCTAGATGGGGTGAGATCCCCAAGACAGGAGGCAGGGCCACAGGGTCTGTAAGGTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR CCA 90 bp | GGGCTATGCTCACCCTGGCGAGTTACACCCAGAAAGGATGAAGAGCAAATGGGACCTGGGGGAATTGTGTaGAAGAGGCTCACCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: GLCSPWRVTPRKDEEQMGPGGIV*KRLTQR Trigger: CCTCTGGGTGAGCCTCTTCCACACAATTCCCCCAGG...TCCCATTTGCTCTTCATCCTTTCTGGGTGTAACTCGCCAGGGTGAGCATAGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR TCA 90 bp | TGCTCACCCTGGCGAGTTACACCCAGAAAGGATGAAGAGCAAATGGGATCGGAGGAAAATGACGCAGCCTaGTGCCTTTGCCTGCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: CSPWRVTPRKDEEQMGSEENDAA*CLCLPG Trigger: ACCTGGCAGGCAAAGGCATCAGGCTGCGTCATTTTC...CTCCGATCCCATTTGCTCTTCATCCTTTCTGGGTGTAACTCGCCAGGGTGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR GCA 90 bp | GGGCTATGCTCACCCTGGCGAGTTACACCCAGAAAGGATGAAGAGCAAATGGGACCTGATGCCTTTGCCTaGCAGGTGAGCATGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: GLCSPWRVTPRKDEEQMGPDAFA*QVSMEK Trigger: CTTCTCCATGCTCACCTGGCAGGCAAAGGCATCAGG...TCCCATTTGCTCTTCATCCTTTCTGGGTGTAACTCGCCAGGGTGAGCATAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR GCA 90 bp | GAGGGCTATGCTCACCCTGGCGAGTTACACCCAGAAAGGATGAAGAGCAAATGGAGCGGAGGGAGAAAATaGCGTGTAGAGGTGGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: EGYAHPGELHPERMKSKWSGGRK*RVEVGK Trigger: CTTCCCCACCTCTACACGGCATTTTCTCCCTCCGCT...CCATTTGCTCTTCATCCTTTCTGGGTGTAACTCGCCAGGGTGAGCATAGCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR GCA 90 bp | GCTCACCCTGGCGAGTTACACCCAGAAAGGATGAAGAGCAAATGGGATCGGAGACTAGGCACTCCAGAGTaGAGTGACCCTCAGAATGGA | + |
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Preference number: 4 (lower is better) Translates to: AHPGELHPERMKSKWDRRLGTPE*SDPQNG Trigger: TCCATTCTGAGGGTCACTGCACTCTGGAGTGCCTAG...TCTCCGATCCCATTTGCTCTTCATCCTTTCTGGGTGTAACTCGCCAGGGTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR TCA 90 bp | TATACACGGAACATCAACTTTGGTCGAGAAACCCAGAGAACCACAGTGACATGGCCTTTGCCTGCCAGGTaGGCATGGAGAAGGACCGCA | + |
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Preference number: 4 (lower is better) Translates to: YTRNINFGRETQRTTVTWPLPAR*AWRRTA Trigger: TGCGGTCCTTCTCCATGCTCACCTGGCAGGCAAAGG...CCATGTCACTGTGGTTCTCTGGGTTTCTCGACCAAAGTTGATGTTCCGTGTATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR GCA 90 bp | GCAGATAATACAAAGAGAACCAAAAGAATAAGACCTTCAGTTGGTGGCAGTTTTGCCAGCCTCTCGCCCTaGCGGCCCCAGTGCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: ADNTKRTKRIRPSVGGSFASLSP*RPQCSQ Trigger: CTGGCTGCACTGGGGCCGGCAGGGCGAGAGGCTGGC...AAAACTGCCACCAACTGAAGGTCTTATTCTTTTGGTTCTCTTTGTATTATCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR GCA 90 bp | AGTTTCTCGGCTGATTTTATTGACATCAGTACACAACAACTTGATTCTCTCATGTGTCTGCCGCGGCCATaGTCCCGGTGGGCGAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: SFSADFIDISTQQLDSLMCLPRP*SRWARS Trigger: GCTTCTCGCCCACCGGGAGCATGGCCGCGGCAGACA...CATGAGAGAATCAAGTTGTTGTGTACTGATGTCAATAAAATCAGCCGAGAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR GCA 90 bp | TGCTCACCCTGGCGAGTTACACCCAGAAAGGATGAAGAGCAAATGGGATCGGAGACCGTAGACTCCTTGTaGCCCTATTTAAGTCATGGT | + |
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Preference number: 4 (lower is better) Translates to: CSPWRVTPRKDEEQMGSETVDSL*PYLSHG Trigger: ACCATGACTTAAATAGGGGCACAAGGAGTCTACGGT...CTCCGATCCCATTTGCTCTTCATCCTTTCTGGGTGTAACTCGCCAGGGTGAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR GCA 90 bp | TGCTCACCCTGGCGAGTTACACCCAGAAAGGATGAAGAGCAAATGGGATCGGAGACATTTCATTCCTGGTaGTTAGTCCTCCCCAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: CSPWRVTPRKDEEQMGSETFHSW*LVLPKS Trigger: TGACTTGGGGAGGACTAAGCACCAGGAATGAAATGT...CTCCGATCCCATTTGCTCTTCATCCTTTCTGGGTGTAACTCGCCAGGGTGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR CCA 90 bp | AAATACTTTGATGTGGGCTTGGGTATCAACAGACTTGGTGGATGGAGGAAGCCACACGTGGATTCCACTTaGTTTCTCAGCTCCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: KYFDVGLGINRLGGWRKPHVDST*FLSSQG Trigger: GCCCTGGGAGCTGAGAAACCAAGTGGAATCCACGTG...TGGCTTCCTCCATCCACCAAGTCTGTTGATACCCAAGCCCACATCAAAGTATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR CCA 90 bp | GGGCTATGCTCACCCTGGCGAGTTACACCCAGAAAGGATGAAGAGCAAATGGGACCCCTATTTAAGTCATaGTACTTGGGACCAGATTCT | + |
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Preference number: 4 (lower is better) Translates to: GLCSPWRVTPRKDEEQMGPLFKS*YLGPDS Trigger: AGAATCTGGTCCCAAGTACCATGACTTAAATAGGGG...TCCCATTTGCTCTTCATCCTTTCTGGGTGTAACTCGCCAGGGTGAGCATAGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR CCA 90 bp | GAGGGCTATGCTCACCCTGGCGAGTTACACCCAGAAAGGATGAAGAGCAAATGGGCCTCTCTCTATTATTaGCTCCACCTTTATCACATG | + |
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Preference number: 4 (lower is better) Translates to: EGYAHPGELHPERMKSKWASLYY*LHLYHM Trigger: CATGTGATAAAGGTGGAGCCAATAATAGAGAGAGGC...CCATTTGCTCTTCATCCTTTCTGGGTGTAACTCGCCAGGGTGAGCATAGCCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR TCA 90 bp | TGCTCACCCTGGCGAGTTACACCCAGAAAGGATGAAGAGCAAATGGGATCGGAGTCTTCCCTCAGATACTaGAACTCCTGGAAATTAAAG | + |
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Preference number: 4 (lower is better) Translates to: CSPWRVTPRKDEEQMGSESSLRY*NSWKLK Trigger: CTTTAATTTCCAGGAGTTTCAGTATCTGAGGGAAGA...CTCCGATCCCATTTGCTCTTCATCCTTTCTGGGTGTAACTCGCCAGGGTGAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR TCA 90 bp | AAATACTTTGATGTGGGCTTGGGTATCAACAGACTTGGTGGATGGAGGAAGCCATCTCCTTTTCGAAAATaGCGCAGCCTGATGCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: KYFDVGLGINRLGGWRKPSPFRK*RSLMPL Trigger: CAAAGGCATCAGGCTGCGTCATTTTCGAAAAGGAGA...TGGCTTCCTCCATCCACCAAGTCTGTTGATACCCAAGCCCACATCAAAGTATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR GCA 90 bp | AGTTTCTCGGCTGATTTTATTGACATCAGTACACAACAACTTGATTCTCTCATGAGCCCTCCCCACCAATaGCCCAGGCGAGAATCACAG | + |
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Preference number: 4 (lower is better) Translates to: SFSADFIDISTQQLDSLMSPPHQ*PRRESQ Trigger: CTGTGATTCTCGCCTGGGGCATTGGTGGGGAGGGCT...CATGAGAGAATCAAGTTGTTGTGTACTGATGTCAATAAAATCAGCCGAGAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| 3UTR CAA 72 bp | TTCGGCTGGACAGTGCTAGAAAGACTGGGAAATACTTaGATGTGGGCTTGGGTATCAACAGACTTGGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: FGWTVLERLGNT*MWAWVSTDLVD Trigger: ATCCACCAAGTCTGTTGATACCCAAGCCCACATCAAAGTATTTCCCAGTCTTTCTAGCACTGTCCAGCCGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR GCA 90 bp | TATACACGGAACATCAACTTTGGTCGAGAAACCCAGAGAACCACAGTGACATGGGGCACCAGTATGTTGTaGCTTTGTTTGGAATGGGAA | + |
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Preference number: 4 (lower is better) Translates to: YTRNINFGRETQRTTVTWGTSML*LCLEWE Trigger: TTCCCATTCCAAACAAAGGCACAACATACTGGTGCC...CCATGTCACTGTGGTTCTCTGGGTTTCTCGACCAAAGTTGATGTTCCGTGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR TCA 90 bp | GCAGATAATACAAAGAGAACCAAAAGAATAAGACCTTCAGTTGGTGGCAGTTTTCACTCCAGAGTGCAGTaGCCCTCAGAATGGAACTCG | + |
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Preference number: 4 (lower is better) Translates to: ADNTKRTKRIRPSVGGSFHSRVQ*PSEWNS Trigger: CGAGTTCCATTCTGAGGGTCACTGCACTCTGGAGTG...AAAACTGCCACCAACTGAAGGTCTTATTCTTTTGGTTCTCTTTGTATTATCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR TCA 90 bp | AAATACTTTGATGTGGGCTTGGGTATCAACAGACTTGGTGGATGGAGGAAGCCACTTCATAAGGCCTTTTaGTATCAGGAGGTATTGCTG | + |
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Preference number: 4 (lower is better) Translates to: KYFDVGLGINRLGGWRKPLHKAF*YQEVLL Trigger: CAGCAATACCTCCTGATATCAAAAGGCCTTATGAAG...TGGCTTCCTCCATCCACCAAGTCTGTTGATACCCAAGCCCACATCAAAGTATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR CCA 90 bp | GCAGATAATACAAAGAGAACCAAAAGAATAAGACCTTCAGTTGGTGGCAGTTTTCTGTTCCATGATGTCTaGGATGCTGGAGCACCGGGT | + |
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Preference number: 4 (lower is better) Translates to: ADNTKRTKRIRPSVGGSFLFHDV*DAGAPG Trigger: ACCCGGTGCTCCAGCATCCCAGACATCATGGAACAG...AAAACTGCCACCAACTGAAGGTCTTATTCTTTTGGTTCTCTTTGTATTATCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR CCA 90 bp | AGGAAAACAGAAAGAACTTGTGTGTGCAGAAATTTAAGTGTCCAGGCTCTTCGTTGGACCAGGTTCTCATaGCCTCTCTCTATTATTGGC | + |
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Preference number: 4 (lower is better) Translates to: RKTERTCVCRNLSVQALRWTRFS*PLSIIG Trigger: GCCAATAATAGAGAGAGGCCATGAGAACCTGGTCCA...ACGAAGAGCCTGGACACTTAAATTTCTGCACACACAAGTTCTTTCTGTTTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR TCA 90 bp | AGGAAAACAGAAAGAACTTGTGTGTGCAGAAATTTAAGTGTCCAGGCTCTTCGTTATACCGGCATTCAGTaGTCAGGTTATCACCTGGTA | + |
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Preference number: 4 (lower is better) Translates to: RKTERTCVCRNLSVQALRYTGIQ*SGYHLV Trigger: TACCAGGTGATAACCTGATCACTGAATGCCGGTATA...ACGAAGAGCCTGGACACTTAAATTTCTGCACACACAAGTTCTTTCTGTTTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR TCA 90 bp | TATACACGGAACATCAACTTTGGTCGAGAAACCCAGAGAACCACAGTGACATGGTGTTCATTGCATCCATaGAAGAAAGGTTTCTGTACT | + |
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Preference number: 4 (lower is better) Translates to: YTRNINFGRETQRTTVTWCSLHP*KKGFCT Trigger: AGTACAGAAACCTTTCTTTCATGGATGCAATGAACA...CCATGTCACTGTGGTTCTCTGGGTTTCTCGACCAAAGTTGATGTTCCGTGTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR GCA 90 bp | TATACACGGAACATCAACTTTGGTCGAGAAACCCAGAGAACCACAGTGACATGGGAAAGGTTTCTGTACTaGTTAGGGCTTTTGATAATG | + |
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Preference number: 4 (lower is better) Translates to: YTRNINFGRETQRTTVTWERFLY*LGLLIM Trigger: CATTATCAAAAGCCCTAAGCAGTACAGAAACCTTTC...CCATGTCACTGTGGTTCTCTGGGTTTCTCGACCAAAGTTGATGTTCCGTGTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR GCA 90 bp | AGGAAAACAGAAAGAACTTGTGTGTGCAGAAATTTAAGTGTCCAGGCTCTTCGTTTCCAACTCTCTGTCTaGGTTTGTGAAATAGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: RKTERTCVCRNLSVQALRFQLSV*VCEIVL Trigger: CAGGACTATTTCACAAACGCAGACAGAGAGTTGGAA...ACGAAGAGCCTGGACACTTAAATTTCTGCACACACAAGTTCTTTCTGTTTTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR GCA 90 bp | AGGAAAACAGAAAGAACTTGTGTGTGCAGAAATTTAAGTGTCCAGGCTCTTCGTTTGAATCGACCACTCTaGGTTGTCTGTCTTAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: RKTERTCVCRNLSVQALRLNRPL*VVCLRT Trigger: TGTTCTAAGACAGACAACGCAGAGTGGTCGATTCAA...ACGAAGAGCCTGGACACTTAAATTTCTGCACACACAAGTTCTTTCTGTTTTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR CCA 90 bp | GCAGATAATACAAAGAGAACCAAAAGAATAAGACCTTCAGTTGGTGGCAGTTTTAGGACCGCAAACACGTaGATTCCACTTGGTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ADNTKRTKRIRPSVGGSFRTANT*IPLGFS Trigger: TGAGAAACCAAGTGGAATCCACGTGTTTGCGGTCCT...AAAACTGCCACCAACTGAAGGTCTTATTCTTTTGGTTCTCTTTGTATTATCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR CCA 90 bp | AGTTTCTCGGCTGATTTTATTGACATCAGTACACAACAACTTGATTCTCTCATGGACACATTTCATTCCTaGTGCTTAGTCCTCCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SFSADFIDISTQQLDSLMDTFHS*CLVLPK Trigger: CTTGGGGAGGACTAAGCACCAGGAATGAAATGTGTC...CATGAGAGAATCAAGTTGTTGTGTACTGATGTCAATAAAATCAGCCGAGAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR CCA 90 bp | AGTTTCTCGGCTGATTTTATTGACATCAGTACACAACAACTTGATTCTCTCATGTTAAGTCATGGTACTTaGGACCAGATTCTCCGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SFSADFIDISTQQLDSLMLSHGT*DQILRD Trigger: ATCCCGGAGAATCTGGTCCCAAGTACCATGACTTAA...CATGAGAGAATCAAGTTGTTGTGTACTGATGTCAATAAAATCAGCCGAGAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR GCA 90 bp | GCAGATAATACAAAGAGAACCAAAAGAATAAGACCTTCAGTTGGTGGCAGTTTTGATATCAGGAGGTATTaGTGTCATGCCTTGAATCGA | + |
|
Preference number: 4 (lower is better) Translates to: ADNTKRTKRIRPSVGGSFDIRRY*CHALNR Trigger: TCGATTCAAGGCATGACAGCAATACCTCCTGATATC...AAAACTGCCACCAACTGAAGGTCTTATTCTTTTGGTTCTCTTTGTATTATCTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR CCA 90 bp | AGTTTCTCGGCTGATTTTATTGACATCAGTACACAACAACTTGATTCTCTCATGGGAATCTTAAACATTTaGCACCAGTATGTTGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SFSADFIDISTQQLDSLMGILNI*HQYVVP Trigger: AGGCACAACATACTGGTGCCAAATGTTTAAGATTCC...CATGAGAGAATCAAGTTGTTGTGTACTGATGTCAATAAAATCAGCCGAGAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR CCA 90 bp | GCAGATAATACAAAGAGAACCAAAAGAATAAGACCTTCAGTTGGTGGCAGTTTTTGTTGTGCCTTTGTTTaGAATGGGAACGTTTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: ADNTKRTKRIRPSVGGSFCCAFV*NGNVLI Trigger: AATCAAAACGTTCCCATTCCAAACAAAGGCACAACA...AAAACTGCCACCAACTGAAGGTCTTATTCTTTTGGTTCTCTTTGTATTATCTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS GCA 90 bp | GGAAGGCCAGCCTCTCGCCCTGCCGGCCCCAGTGCAGCCAGTACTTaGCTTCGGGATCGAGGACCACGCGGTGCGGGTACGAGCGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GRPASRPAGPSAAST*LRDRGPRGAGTSGP Trigger: CGGGCCGCTCGTACCCGCACCGCGTGGTCCTCGATCCCGAAGGCAAGTACTGGCTGCACTGGGGCCGGCAGGGCGAGAGGCTGGCCTTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS GCA 90 bp | CGTACCTCCAGACGGAAGGCCAGCCTCTCGCCCTGCCGGCCCCAGTaGAGCCAGTACTTGCCTTCGGGATCGAGGACCACGCGGTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RTSRRKASLSPCRPQ*SQYLPSGSRTTRCG Trigger: CCCGCACCGCGTGGTCCTCGATCCCGAAGGCAAGTACTGGCTGCACTGGGGCCGGCAGGGCGAGAGGCTGGCCTTCCGTCTGGAGGTACG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS CCA 90 bp | GGGCCACTCCGCCTACCACGATGTCTGCCGCGGCCATGCTCCCGGTaGGCGAGAAGCCGAAGCCCACGTAGCCGTTCGTGCGTACCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GPLRLPRCLPRPCSR*ARSRSPRSRSCVPP Trigger: TGGAGGTACGCACGAACGGCTACGTGGGCTTCGGCTTCTCGCCCACCGGGAGCATGGCCGCGGCAGACATCGTGGTAGGCGGAGTGGCCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS CCA 90 bp | GCACTCCAGAGTGCAGTGACCCTCAGAATGGAACTCGGGCATCCCTaGGGGAATTGTGTGGAAGAGGCTCACCCAGAGGCCAGCCTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: ALQSAVTLRMELGHP*GNCVEEAHPEASLN Trigger: ATTGAGGCTGGCCTCTGGGTGAGCCTCTTCCACACAATTCCCCCAGGGATGCCCGAGTTCCATTCTGAGGGTCACTGCACTCTGGAGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS TCA 90 bp | ACAAGCCCTGGCTGCTCAGCATACTTCCAAGAAGCAGAGCGCACGTaGGCAAGCGGAGGGAGAAAATGCCGTGTAGAGGTGGGGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TSPGCSAYFQEAERT*ASGGRKCRVEVGKL Trigger: CAGCTTCCCCACCTCTACACGGCATTTTCTCCCTCCGCTTGCTCACGTGCGCTCTGCTTCTTGGAAGTATGCTGAGCAGCCAGGGCTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS GCA 90 bp | CTCACGGTGCTATCCGTGAGACTCTTGTCATTGACATCGCACGTGTaGAGCTCCCTGCTAAACTCGATCACTGTGTGTGTGCTGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LTVLSVRLLSLTSHV*SSLLNSITVCVLFS Trigger: GGAGAACAGCACACACACAGTGATCGAGTTTAGCAGGGAGCTGCACACGTGCGATGTCAATGACAAGAGTCTCACGGATAGCACCGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS GCA 90 bp | CATTTCCTCTCCTTTTCGAAAATGACGCAGCCTGATGCCTTTGCCTaGCAGGTGAGCATGGAGAAGGACCGCAAACACGTGGATTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: HFLSFSKMTQPDAFA*QVSMEKDRKHVDST Trigger: AGTGGAATCCACGTGTTTGCGGTCCTTCTCCATGCTCACCTGGCAGGCAAAGGCATCAGGCTGCGTCATTTTCGAAAAGGAGAGGAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS TCA 90 bp | AAGCCAGCAACTTCATTTCCTCTCCTTTTCGAAAATGACGCAGCCTaGTGCCTTTGCCTGCCAGGTGAGCATGGAGAAGGACCGCAAACA | + |
|
Preference number: 5 (lower is better) Translates to: KPATSFPLLFENDAA*CLCLPGEHGEGPQT Trigger: TGTTTGCGGTCCTTCTCCATGCTCACCTGGCAGGCAAAGGCATCAGGCTGCGTCATTTTCGAAAAGGAGAGGAAATGAAGTTGCTGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR CAA 90 bp | GAGGGCTATGCTCACCCTGGCGAGTTACACCCAGAAAGGATGAAGAGCAAATGGCTAAGAACGAGCTTGTaGAAGGACAGCCCTTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: EGYAHPGELHPERMKSKWLRTSL*KDSPSF Trigger: AAAGGAAGGGCTGTCCTTCAACAAGCTCGTTCTTAG...CCATTTGCTCTTCATCCTTTCTGGGTGTAACTCGCCAGGGTGAGCATAGCCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR CAA 90 bp | GAGGGCTATGCTCACCCTGGCGAGTTACACCCAGAAAGGATGAAGAGCAAATGGTATTGCTGTCATGCCTaGAATCGACCACTCTGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: EGYAHPGELHPERMKSKWYCCHA*NRPLCV Trigger: AACGCAGAGTGGTCGATTCAAGGCATGACAGCAATA...CCATTTGCTCTTCATCCTTTCTGGGTGTAACTCGCCAGGGTGAGCATAGCCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS CCA 90 bp | GTAGATCTCCTTCACGCCGATGAACTGCAGCTGTTCCATGATGTCTaGGATGCTGGAGCACCGGGTCAGGTTAACTCTTGGATAATAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VDLLHADELQLFHDV*DAGAPGQVNSWIIK Trigger: CTTTATTATCCAAGAGTTAACCTGACCCGGTGCTCCAGCATCCCAGACATCATGGAACAGCTGCAGTTCATCGGCGTGAAGGAGATCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR CAA 90 bp | GAGGGCTATGCTCACCCTGGCGAGTTACACCCAGAAAGGATGAAGAGCAAATGGACTGTAGACACCACATaGGCTTTCTCAGGATTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: EGYAHPGELHPERMKSKWTVDTT*AFSGFS Trigger: ACTGAATCCTGAGAAAGCCAATGTGGTGTCTACAGT...CCATTTGCTCTTCATCCTTTCTGGGTGTAACTCGCCAGGGTGAGCATAGCCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR CAA 90 bp | TGCTCACCCTGGCGAGTTACACCCAGAAAGGATGAAGAGCAAATGGGATCGGAGTTTGGCACCAGTATGTaGTGCCTTTGTTTGGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: CSPWRVTPRKDEEQMGSEFGTSM*CLCLEW Trigger: CCATTCCAAACAAAGGCACAACATACTGGTGCCAAA...CTCCGATCCCATTTGCTCTTCATCCTTTCTGGGTGTAACTCGCCAGGGTGAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR CAA 90 bp | TATACACGGAACATCAACTTTGGTCGAGAAACCCAGAGAACCACAGTGACATGGACACGTGGATTCCACTaGGTTTCTCAGCTCCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: YTRNINFGRETQRTTVTWTRGFH*VSQLPG Trigger: CCCTGGGAGCTGAGAAACCAAGTGGAATCCACGTGT...CCATGTCACTGTGGTTCTCTGGGTTTCTCGACCAAAGTTGATGTTCCGTGTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS TCA 90 bp | AAGCTGCTTTCTCGCACACCAGAGGTTCTGCTTCATAAGGCCTTTTaGTATCAGGAGGTATTGCTGTCATGCCTTGAATCGACCACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KLLSRTPEVLLHKAF*YQEVLLSCLESTTL Trigger: CAGAGTGGTCGATTCAAGGCATGACAGCAATACCTCCTGATATCAAAAGGCCTTATGAAGCAGAACCTCTGGTGTGCGAGAAAGCAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS GCA 90 bp | ACACCACATTGGCTTTCTCAGGATTCAGTAACCGTAGACTCCTTGTaGCCCTATTTAAGTCATGGTACTTGGGACCAGATTCTCCGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TPHWLSQDSVTVDSL*PYLSHGTWDQILRD Trigger: ATCCCGGAGAATCTGGTCCCAAGTACCATGACTTAAATAGGGGCACAAGGAGTCTACGGTTACTGAATCCTGAGAAAGCCAATGTGGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR CAA 90 bp | TGCTCACCCTGGCGAGTTACACCCAGAAAGGATGAAGAGCAAATGGGATCGGAGATGTTGTGCCTTTGTTaGGAATGGGAACGTTTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: CSPWRVTPRKDEEQMGSEMLCLC*EWERFD Trigger: ATCAAAACGTTCCCATTCCAAACAAAGGCACAACAT...CTCCGATCCCATTTGCTCTTCATCCTTTCTGGGTGTAACTCGCCAGGGTGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS GCA 90 bp | CACCAGAGGTTCTGCTTCATAAGGCCTTTTGATATCAGGAGGTATTaGTGTCATGCCTTGAATCGACCACTCTGCGTTGTCTGTCTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: HQRFCFIRPFDIRRY*CHALNRPLCVVCLR Trigger: TCTAAGACAGACAACGCAGAGTGGTCGATTCAAGGCATGACAGCAATACCTCCTGATATCAAAAGGCCTTATGAAGCAGAACCTCTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR CAA 90 bp | GGGCTATGCTCACCCTGGCGAGTTACACCCAGAAAGGATGAAGAGCAAATGGGATGGAATGGGAACGTTTaGATTTACCAGATCAAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: GLCSPWRVTPRKDEEQMGWNGNV*IYQIKV Trigger: TACTTTGATCTGGTAAATCAAAACGTTCCCATTCCA...TCCCATTTGCTCTTCATCCTTTCTGGGTGTAACTCGCCAGGGTGAGCATAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS GCA 90 bp | TTTGATATCAGGAGGTATTGCTGTCATGCCTTGAATCGACCACTCTaGGTTGTCTGTCTTAGAACATCTCACATTCACAGGCAGGCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: FDIRRYCCHALNRPL*VVCLRTSHIHRQAK Trigger: CTTAGCCTGCCTGTGAATGTGAGATGTTCTAAGACAGACAACGCAGAGTGGTCGATTCAAGGCATGACAGCAATACCTCCTGATATCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR CAA 90 bp | AGGAAAACAGAAAGAACTTGTGTGTGCAGAAATTTAAGTGTCCAGGCTCTTCGTTTTAAGTCATGGTACTaGGGACCAGATTCTCCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RKTERTCVCRNLSVQALRFKSWY*GPDSPG Trigger: TCCCGGAGAATCTGGTCCCAAGTACCATGACTTAAA...ACGAAGAGCCTGGACACTTAAATTTCTGCACACACAAGTTCTTTCTGTTTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS GCA 90 bp | CATTTGAACTTGTTCATTGCATCCATGAAAGAAAGGTTTCTGTACTaGTTAGGGCTTTTGATAATGAAAGGCCATGTCGTGACAGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HLNLFIASMKERFLY*LGLLIMKGHVVTGL Trigger: CAGACCTGTCACGACATGGCCTTTCATTATCAAAAGCCCTAAGCAGTACAGAAACCTTTCTTTCATGGATGCAATGAACAAGTTCAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR CAA 90 bp | AGTTTCTCGGCTGATTTTATTGACATCAGTACACAACAACTTGATTCTCTCATGGTAACCGTAGACTCCTaGTGCCCCTATTTAAGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SFSADFIDISTQQLDSLMVTVDS*CPYLSH Trigger: ATGACTTAAATAGGGGCACAAGGAGTCTACGGTTAC...CATGAGAGAATCAAGTTGTTGTGTACTGATGTCAATAAAATCAGCCGAGAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR CAA 90 bp | AGTTTCTCGGCTGATTTTATTGACATCAGTACACAACAACTTGATTCTCTCATGAGGAATCTTAAACATTaGGCACCAGTATGTTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SFSADFIDISTQQLDSLMRNLKH*APVCCA Trigger: GGCACAACATACTGGTGCCAAATGTTTAAGATTCCT...CATGAGAGAATCAAGTTGTTGTGTACTGATGTCAATAAAATCAGCCGAGAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR CAA 90 bp | AGTTTCTCGGCTGATTTTATTGACATCAGTACACAACAACTTGATTCTCTCATGTACTGCTTAGGGCTTTaGATAATGAAAGGCCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: SFSADFIDISTQQLDSLMYCLGL*IMKGHV Trigger: GACATGGCCTTTCATTATCAAAAGCCCTAAGCAGTA...CATGAGAGAATCAAGTTGTTGTGTACTGATGTCAATAAAATCAGCCGAGAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS-3UTR CAA 90 bp | GCAGATAATACAAAGAGAACCAAAAGAATAAGACCTTCAGTTGGTGGCAGTTTTTATCACCTGGTAAGATaGTTTGTTCTTCCCTCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: ADNTKRTKRIRPSVGGSFYHLVR*FVLPSD Trigger: ATCTGAGGGAAGAACAAACAATCTTACCAGGTGATA...AAAACTGCCACCAACTGAAGGTCTTATTCTTTTGGTTCTCTTTGTATTATCTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS GCA 72 bp | GGGCCGCCCGTGGGCCACTCCGCCTACCACGATGTCTaGCGCGGCCATGCTCCCGGTGGGCGAGAAGCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: GPPVGHSAYHDV*RGHAPGGREAE Trigger: TTCGGCTTCTCGCCCACCGGGAGCATGGCCGCGGCAGACATCGTGGTAGGCGGAGTGGCCCACGGGCGGCCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS CAA 90 bp | CGGAAGGCCAGCCTCTCGCCCTGCCGGCCCCAGTGCAGCCAGTACTaGCCTTCGGGATCGAGGACCACGCGGTGCGGGTACGAGCGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RKASLSPCRPQCSQY*PSGSRTTRCGYERP Trigger: GGGCCGCTCGTACCCGCACCGCGTGGTCCTCGATCCCGAAGGCAAGTACTGGCTGCACTGGGGCCGGCAGGGCGAGAGGCTGGCCTTCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS CAA 72 bp | AGCCTCTCGCCCTGCCGGCCCCAGTGCAGCCAGTACTaGCCTTCGGGATCGAGGACCACGCGGTGCGGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: SLSPCRPQCSQY*PSGSRTTRCGY Trigger: GTACCCGCACCGCGTGGTCCTCGATCCCGAAGGCAAGTACTGGCTGCACTGGGGCCGGCAGGGCGAGAGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS CCA 72 bp | AGTGCAGTGACCCTCAGAATGGAACTCGGGCATCCCTaGGGGAATTGTGTGGAAGAGGCTCACCCAGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SAVTLRMELGHP*GNCVEEAHPEA Trigger: GGCCTCTGGGTGAGCCTCTTCCACACAATTCCCCCAGGGATGCCCGAGTTCCATTCTGAGGGTCACTGCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS CAA 90 bp | CTGCCAGGTGAGCATGGAGAAGGACCGCAAACACGTGGATTCCACTaGGTTTCTCAGCTCCCAGGGCCTCCTCTAGGCACTCCAGAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LPGEHGEGPQTRGFH*VSQLPGPPLGTPEC Trigger: GCACTCTGGAGTGCCTAGAGGAGGCCCTGGGAGCTGAGAAACCAAGTGGAATCCACGTGTTTGCGGTCCTTCTCCATGCTCACCTGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS CAA 72 bp | GAGCATGGAGAAGGACCGCAAACACGTGGATTCCACTaGGTTTCTCAGCTCCCAGGGCCTCCTCTAGGCACT | + |
|
Preference number: 6 (lower is better) Translates to: EHGEGPQTRGFH*VSQLPGPPLGT Trigger: AGTGCCTAGAGGAGGCCCTGGGAGCTGAGAAACCAAGTGGAATCCACGTGTTTGCGGTCCTTCTCCATGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS CCA 72 bp | CTTCACGCCGATGAACTGCAGCTGTTCCATGATGTCTaGGATGCTGGAGCACCGGGTCAGGTTAACTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LHADELQLFHDV*DAGAPGQVNSW Trigger: CCAAGAGTTAACCTGACCCGGTGCTCCAGCATCCCAGACATCATGGAACAGCTGCAGTTCATCGGCGTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS GCA 72 bp | TCCTTTTCGAAAATGACGCAGCCTGATGCCTTTGCCTaGCAGGTGAGCATGGAGAAGGACCGCAAACACGTG | + |
|
Preference number: 6 (lower is better) Translates to: SFSKMTQPDAFA*QVSMEKDRKHV Trigger: CACGTGTTTGCGGTCCTTCTCCATGCTCACCTGGCAGGCAAAGGCATCAGGCTGCGTCATTTTCGAAAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS GCA 72 bp | CTATCCGTGAGACTCTTGTCATTGACATCGCACGTGTaGAGCTCCCTGCTAAACTCGATCACTGTGTGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LSVRLLSLTSHV*SSLLNSITVCV Trigger: CACACACACAGTGATCGAGTTTAGCAGGGAGCTGCACACGTGCGATGTCAATGACAAGAGTCTCACGGATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS CCA 72 bp | GTAGACTCCTTGTGCCCCTATTTAAGTCATGGTACTTaGGACCAGATTCTCCGGGATCGTCATGGTGGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: VDSLCPYLSHGT*DQILRDRHGGR Trigger: CCTACCACCATGACGATCCCGGAGAATCTGGTCCCAAGTACCATGACTTAAATAGGGGCACAAGGAGTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS CAA 72 bp | ATAACTCTCACGGTGCTATCCGTGAGACTCTTGTCATaGACATCGCACGTGTGCAGCTCCCTGCTAAACTCG | + |
|
Preference number: 6 (lower is better) Translates to: ITLTVLSVRLLS*TSHVCSSLLNS Trigger: CGAGTTTAGCAGGGAGCTGCACACGTGCGATGTCAATGACAAGAGTCTCACGGATAGCACCGTGAGAGTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS CAA 90 bp | TCATTCCTGGTGCTTAGTCCTCCCCAAGTCATCACAGCTCGGTCCTaGGTGTTATACCGGCATTCAGTGATCAGGTTATCACCTGGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: SFLVLSPPQVITARS*VLYRHSVIRLSPGK Trigger: CTTACCAGGTGATAACCTGATCACTGAATGCCGGTATAACACCAAGGACCGAGCTGTGATGACTTGGGGAGGACTAAGCACCAGGAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS GCA 72 bp | AGGTGGGGAAGCTGCTTTCTCGCACACCAGAGGTTCTaGTTCATAAGGCCTTTTGATATCAGGAGGTATTGC | + |
|
Preference number: 6 (lower is better) Translates to: RWGSCFLAHQRF*FIRPFDIRRYC Trigger: GCAATACCTCCTGATATCAAAAGGCCTTATGAAGCAGAACCTCTGGTGTGCGAGAAAGCAGCTTCCCCACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS CCA 72 bp | AGTAACCGTAGACTCCTTGTGCCCCTATTTAAGTCATaGTACTTGGGACCAGATTCTCCGGGATCGTCATGG | + |
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Preference number: 6 (lower is better) Translates to: SNRRLLVPLFKS*YLGPDSPGSSW Trigger: CCATGACGATCCCGGAGAATCTGGTCCCAAGTACCATGACTTAAATAGGGGCACAAGGAGTCTACGGTTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS CAA 72 bp | GTGCTTAGTCCTCCCCAAGTCATCACAGCTCGGTCCTaGGTGTTATACCGGCATTCAGTGATCAGGTTATCA | + |
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Preference number: 6 (lower is better) Translates to: VLSPPQVITARS*VLYRHSVIRLS Trigger: TGATAACCTGATCACTGAATGCCGGTATAACACCAAGGACCGAGCTGTGATGACTTGGGGAGGACTAAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS TCA 72 bp | TCTCGCACACCAGAGGTTCTGCTTCATAAGGCCTTTTaGTATCAGGAGGTATTGCTGTCATGCCTTGAATCG | + |
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Preference number: 6 (lower is better) Translates to: SRTPEVLLHKAF*YQEVLLSCLES Trigger: CGATTCAAGGCATGACAGCAATACCTCCTGATATCAAAAGGCCTTATGAAGCAGAACCTCTGGTGTGCGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS GCA 72 bp | AGGAGGTATTGCTGTCATGCCTTGAATCGACCACTCTaGGTTGTCTGTCTTAGAACATCTCACATTCACAGG | + |
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Preference number: 6 (lower is better) Translates to: RRYCCHALNRPL*VVCLRTSHIHR Trigger: CCTGTGAATGTGAGATGTTCTAAGACAGACAACGCAGAGTGGTCGATTCAAGGCATGACAGCAATACCTCCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS CAA 72 bp | CATTGGCTTTCTCAGGATTCAGTAACCGTAGACTCCTaGTGCCCCTATTTAAGTCATGGTACTTGGGACCAG | + |
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Preference number: 6 (lower is better) Translates to: HWLSQDSVTVDS*CPYLSHGTWDQ Trigger: CTGGTCCCAAGTACCATGACTTAAATAGGGGCACAAGGAGTCTACGGTTACTGAATCCTGAGAAAGCCAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS TCA 72 bp | GGCCTTTTGATATCAGGAGGTATTGCTGTCATGCCTTaGATCGACCACTCTGCGTTGTCTGTCTTAGAACAT | + |
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Preference number: 6 (lower is better) Translates to: GLLISGGIAVMP*IDHSALSVLEH Trigger: ATGTTCTAAGACAGACAACGCAGAGTGGTCGATTCAAGGCATGACAGCAATACCTCCTGATATCAAAAGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS GCA 72 bp | TGGCTTTCTCAGGATTCAGTAACCGTAGACTCCTTGTaGCCCTATTTAAGTCATGGTACTTGGGACCAGATT | + |
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Preference number: 6 (lower is better) Translates to: WLSQDSVTVDSL*PYLSHGTWDQI Trigger: AATCTGGTCCCAAGTACCATGACTTAAATAGGGGCACAAGGAGTCTACGGTTACTGAATCCTGAGAAAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS GCA 72 bp | TTCTGCTTCATAAGGCCTTTTGATATCAGGAGGTATTaGTGTCATGCCTTGAATCGACCACTCTGCGTTGTC | + |
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Preference number: 6 (lower is better) Translates to: FCFIRPFDIRRY*CHALNRPLCVV Trigger: GACAACGCAGAGTGGTCGATTCAAGGCATGACAGCAATACCTCCTGATATCAAAAGGCCTTATGAAGCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS CAA 72 bp | AGGCCTTTTGATATCAGGAGGTATTGCTGTCATGCCTaGAATCGACCACTCTGCGTTGTCTGTCTTAGAACA | + |
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Preference number: 6 (lower is better) Translates to: RPFDIRRYCCHA*NRPLCVVCLRT Trigger: TGTTCTAAGACAGACAACGCAGAGTGGTCGATTCAAGGCATGACAGCAATACCTCCTGATATCAAAAGGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS TCA 72 bp | TCACAGCTCGGTCCTTGGTGTTATACCGGCATTCAGTaGTCAGGTTATCACCTGGTAAGATTGTTTGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: SQLGPWCYTGIQ*SGYHLVRLFVL Trigger: AAGAACAAACAATCTTACCAGGTGATAACCTGATCACTGAATGCCGGTATAACACCAAGGACCGAGCTGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS CAA 90 bp | TGCTTCATAAGGCCTTTTGATATCAGGAGGTATTGCTGTCATGCCTaGAATCGACCACTCTGCGTTGTCTGTCTTAGAACATCTCACATT | + |
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Preference number: 6 (lower is better) Translates to: CFIRPFDIRRYCCHA*NRPLCVVCLRTSHI Trigger: AATGTGAGATGTTCTAAGACAGACAACGCAGAGTGGTCGATTCAAGGCATGACAGCAATACCTCCTGATATCAAAAGGCCTTATGAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS CAA 72 bp | TGTGATGGACCAGGTTCTCATGGCCTCTCTCTATTATaGGCTCCACCTTTATCACATGATGTTTTTCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: CDGPGSHGLSLL*APPLSHDVFLG Trigger: TCCAAGAAAAACATCATGTGATAAAGGTGGAGCCAATAATAGAGAGAGGCCATGAGAACCTGGTCCATCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS CAA 90 bp | GCCTCTCTCTATTATTGGCTCCACCTTTATCACATGATGTTTTTCTaGGAATGTAGGAATCTTAAACATTTGGCACCAGTATGTTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: ASLYYWLHLYHMMFF*ECRNLKHLAPVCCA Trigger: GGCACAACATACTGGTGCCAAATGTTTAAGATTCCTACATTCCAAGAAAAACATCATGTGATAAAGGTGGAGCCAATAATAGAGAGAGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS TCA 72 bp | CAGTATGTTGTGCCTTTGTTTGGAATGGGAACGTTTTaGTTTACCAGATCAAAGTACGGTAAGACTGTAGAC | + |
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Preference number: 6 (lower is better) Translates to: QYVVPLFGMGTF*FTRSKYGKTVD Trigger: GTCTACAGTCTTACCGTACTTTGATCTGGTAAATCAAAACGTTCCCATTCCAAACAAAGGCACAACATACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS GCA 72 bp | TTGTTCATTGCATCCATGAAAGAAAGGTTTCTGTACTaGTTAGGGCTTTTGATAATGAAAGGCCATGTCGTG | + |
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Preference number: 6 (lower is better) Translates to: LFIASMKERFLY*LGLLIMKGHVV Trigger: CACGACATGGCCTTTCATTATCAAAAGCCCTAAGCAGTACAGAAACCTTTCTTTCATGGATGCAATGAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS CAA 72 bp | ATGATGTTTTTCTTGGAATGTAGGAATCTTAAACATTaGGCACCAGTATGTTGTGCCTTTGTTTGGAATGGG | + |
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Preference number: 6 (lower is better) Translates to: MMFFLECRNLKH*APVCCAFVWNG Trigger: CCCATTCCAAACAAAGGCACAACATACTGGTGCCAAATGTTTAAGATTCCTACATTCCAAGAAAAACATCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS CAA 90 bp | CTTTATCACATGATGTTTTTCTTGGAATGTAGGAATCTTAAACATTaGGCACCAGTATGTTGTGCCTTTGTTTGGAATGGGAACGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: LYHMMFFLECRNLKH*APVCCAFVWNGNVL Trigger: CAAAACGTTCCCATTCCAAACAAAGGCACAACATACTGGTGCCAAATGTTTAAGATTCCTACATTCCAAGAAAAACATCATGTGATAAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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| CDS TCA 72 bp | TGGCCTCTCTCTATTATTGGCTCCACCTTTATCACATaGTGTTTTTCTTGGAATGTAGGAATCTTAAACATT | + |
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Preference number: 6 (lower is better) Translates to: WPLSIIGSTFIT*CFSWNVGILNI Trigger: AATGTTTAAGATTCCTACATTCCAAGAAAAACATCATGTGATAAAGGTGGAGCCAATAATAGAGAGAGGCCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095784.3 |
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