Pregenerated sensors for MOSPD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037221Ensembl transcript IDs: ENSMUST00000037620.14, ENSMUST00000111007.8, ENSMUST00000133705.2, ENSMUST00000154708.8
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCGGAAGCGAGGGAGGAGGAGCAAGGTGCAAACATCACAGTGGCTaGCTTAGGTCCCTGCCTGCGAAGGAGAGGGTGGGTGAGGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: GGSEGGGARCKHHSG*LRSLPAKERVGEVG Trigger: ACCCACCTCACCCACCCTCTCCTTCGCAGGCAGGGACCTAAGGCAGCCACTGTGATGTTTGCACCTTGCTCCTCCTCCCTCGCTTCCGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| 3UTR GCA 90 bp | GAGGAGGAGCAACGGATGGGCGGAAGCGAGGGAGGAGGAGCAAGGTaGAAACATCACAGTGGCTGCCTTAGGTCCCTGCCTGCGAAGGAG | + |
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Preference number: 1 (lower is better) Translates to: EEEQRMGGSEGGGAR*KHHSGCLRSLPAKE Trigger: CTCCTTCGCAGGCAGGGACCTAAGGCAGCCACTGTGATGTTTGCACCTTGCTCCTCCTCCCTCGCTTCCGCCCATCCGTTGCTCCTCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| 3UTR TCA 90 bp | ACTTGGAAAATGAGTACAAATCCCAGGTGCTTGCTGTGGGGAGGCTaGCAATCAACGGATGGGCGGAAGCGAGGGAGGAGGAGCAACGGA | + |
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Preference number: 1 (lower is better) Translates to: TWKMSTNPRCLLWGG*QSTDGRKRGRRSNG Trigger: TCCGTTGCTCCTCCTCCCTCGCTTCCGCCCATCCGTTGATTGTCAGCCTCCCCACAGCAAGCACCTGGGATTTGTACTCATTTTCCAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGAGCAACGGATGGGCGGAAGCGAGGGAGGAGGAGCAACGGATGGGCGGAAGGGAGGAGGAGCAAGGTaGAAACATCACAGTGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: EEQRMGGSEGGGATDGRKGGGAR*KHHSGC Trigger: GCAGCCACTGTGATGTTTGCACCTTGCTCCTCCTCC...CTTCCGCCCATCCGTTGCTCCTCCTCCCTCGCTTCCGCCCATCCGTTGCTCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| 3UTR GCA 72 bp | CAAGGTGCAAACATCACAGTGGCTGCCTTAGGTCCCTaGCTGCGAAGGAGAGGGTGGGTGAGGTGGGTTCAG | + |
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Preference number: 3 (lower is better) Translates to: QGANITVAALGP*LRRRGWVRWVQ Trigger: CTGAACCCACCTCACCCACCCTCTCCTTCGCAGGCAGGGACCTAAGGCAGCCACTGTGATGTTTGCACCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR TCA 90 bp | GGAGCAACGGATGGGCGGAAGCGAGGGAGGAGGAGCAACGGATGGGCGGAAACGCGGGACAACGGGTCCTaGGGAAGGAGGGGAGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: GATDGRKRGRRSNGWAETRDNGS*GRRGAP Trigger: CGGGGCTCCCCTCCTTCCTCAGGACCCGTTGTCCCG...CGTTTCCGCCCATCCGTTGCTCCTCCTCCCTCGCTTCCGCCCATCCGTTGCTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR CCA 90 bp | GGATGGGCGGAAGCGAGGGAGGAGGAGCAAGGTGCAAACATCACAGTGGCTGCCGGACCCACCAGCTCCTaGTCCTGGGGCGCCCCACGG | + |
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Preference number: 4 (lower is better) Translates to: GWAEAREEEQGANITVAAGPTSS*SWGAPR Trigger: CCGTGGGGCGCCCCAGGACCAGGAGCTGGTGGGTCC...GGCAGCCACTGTGATGTTTGCACCTTGCTCCTCCTCCCTCGCTTCCGCCCATCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR CCA 90 bp | GGAGCAACGGATGGGCGGAAGCGAGGGAGGAGGAGCAACGGATGGGCGGAAACGGGACGTCATAGTGGCTaGGGACGGGGGCCACGTGCC | + |
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Preference number: 4 (lower is better) Translates to: GATDGRKRGRRSNGWAETGRHSG*GRGPRA Trigger: GGCACGTGGCCCCCGTCCCCAGCCACTATGACGTCC...CGTTTCCGCCCATCCGTTGCTCCTCCTCCCTCGCTTCCGCCCATCCGTTGCTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR TCA 90 bp | GATGGGCGGAAGCGAGGGAGGAGGAGCAAGGTGCAAACATCACAGTGGCTGCCTCGGGACAACGGGTCCTaGGGAAGGAGGGGAGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: DGRKRGRRSKVQTSQWLPRDNGS*GRRGAP Trigger: CGGGGCTCCCCTCCTTCCTCAGGACCCGTTGTCCCG...AGGCAGCCACTGTGATGTTTGCACCTTGCTCCTCCTCCCTCGCTTCCGCCCATC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR TCA 90 bp | GGAGCAACGGATGGGCGGAAGCGAGGGAGGAGGAGCAACGGATGGGCGGAAACGGACACGTGCAGGACTTaGGGCAGCTGGCTGCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: GATDGRKRGRRSNGWAETDTCRT*GSWLPS Trigger: GCTTGGCAGCCAGCTGCCTCAAGTCCTGCACGTGTC...CGTTTCCGCCCATCCGTTGCTCCTCCTCCCTCGCTTCCGCCCATCCGTTGCTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR TCA 90 bp | GGAGCAACGGATGGGCGGAAGCGAGGGAGGAGGAGCAACGGATGGGCGGAAACGGGCTCAGAATGTCCCTaGAGCTCCAGGGGGTACGCT | + |
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Preference number: 4 (lower is better) Translates to: GATDGRKRGRRSNGWAETGSECP*SSRGYA Trigger: AGCGTACCCCCTGGAGCTTCAGGGACATTCTGAGCC...CGTTTCCGCCCATCCGTTGCTCCTCCTCCCTCGCTTCCGCCCATCCGTTGCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR TCA 90 bp | CGGATGGGCGGAAGCGAGGGAGGAGGAGCAAGGTGCAAACATCACAGTGGCTGCGACACGTGCAGGACTTaGGGCAGCTGGCTGCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: RMGGSEGGGARCKHHSGCDTCRT*GSWLPS Trigger: GCTTGGCAGCCAGCTGCCTCAAGTCCTGCACGTGTC...GCAGCCACTGTGATGTTTGCACCTTGCTCCTCCTCCCTCGCTTCCGCCCATCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR TCA 90 bp | AGGAGCAACGGATGGGCGGAAGCGAGGGAGGAGGAGCAACGGATGGGCGGAAACGGAAGGCCACAGAGATaGCGCCTGCCAGCAAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: RSNGWAEAREEEQRMGGNGRPQR*RLPARR Trigger: TCTTCTTGCTGGCAGGCGTCATCTCTGTGGCCTTCC...GTTTCCGCCCATCCGTTGCTCCTCCTCCCTCGCTTCCGCCCATCCGTTGCTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR GCA 90 bp | AGGAGCAACGGATGGGCGGAAGCGAGGGAGGAGGAGCAACGGATGGGCGGAAACCTTGAGGCAGCTGGCTaGCAAGCTCATCCTGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: RSNGWAEAREEEQRMGGNLEAAG*QAHPAV Trigger: CACTGCAGGATGAGCTTGGCAGCCAGCTGCCTCAAG...GTTTCCGCCCATCCGTTGCTCCTCCTCCCTCGCTTCCGCCCATCCGTTGCTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR TCA 90 bp | GGATGGGCGGAAGCGAGGGAGGAGGAGCAAGGTGCAAACATCACAGTGGCTGCCGGAAGGCCACAGAGATaGCGCCTGCCAGCAAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: GWAEAREEEQGANITVAAGRPQR*RLPARR Trigger: TCTTCTTGCTGGCAGGCGTCATCTCTGTGGCCTTCC...GGCAGCCACTGTGATGTTTGCACCTTGCTCCTCCTCCCTCGCTTCCGCCCATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR GCA 90 bp | GGAGCAACGGATGGGCGGAAGCGAGGGAGGAGGAGCAACGGATGGGCGGAAACGCCTCAGACAGCTCAATaGGGAATCTGTCCTGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: GATDGRKRGRRSNGWAETPQTAQ*GICPGR Trigger: ACGTCCAGGACAGATTCCGCATTGAGCTGTCTGAGG...CGTTTCCGCCCATCCGTTGCTCCTCCTCCCTCGCTTCCGCCCATCCGTTGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR GCA 90 bp | CGGATGGGCGGAAGCGAGGGAGGAGGAGCAAGGTGCAAACATCACAGTGGCTGCCTTGAGGCAGCTGGCTaGCAAGCTCATCCTGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: RMGGSEGGGARCKHHSGCLEAAG*QAHPAV Trigger: CACTGCAGGATGAGCTTGGCAGCCAGCTGCCTCAAG...GCAGCCACTGTGATGTTTGCACCTTGCTCCTCCTCCCTCGCTTCCGCCCATCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR CCA 90 bp | AGGAGCAACGGATGGGCGGAAGCGAGGGAGGAGGAGCAACGGATGGGCGGAAACCGGGGTCCACTTCTCTaGTCCGCCCTGAATACTAGA | + |
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Preference number: 4 (lower is better) Translates to: RSNGWAEAREEEQRMGGNRGPLL*SALNTR Trigger: TCTAGTATTCAGGGCGGACCAGAGAAGTGGACCCCG...GTTTCCGCCCATCCGTTGCTCCTCCTCCCTCGCTTCCGCCCATCCGTTGCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR CCA 90 bp | GATGGGCGGAAGCGAGGGAGGAGGAGCAAGGTGCAAACATCACAGTGGCTGCCTCTCCAGGGGGTACGCTaGGGCTCGAAGAACAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: DGRKRGRRSKVQTSQWLPLQGVR*GSKNRG Trigger: ACCTCTGTTCTTCGAGCCCCAGCGTACCCCCTGGAG...AGGCAGCCACTGTGATGTTTGCACCTTGCTCCTCCTCCCTCGCTTCCGCCCATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR CCA 90 bp | AGGAGCAACGGATGGGCGGAAGCGAGGGAGGAGGAGCAACGGATGGGCGGAAACTCTCCTGAAGATGTCTaGCTGGGGTCAGTCCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: RSNGWAEAREEEQRMGGNSPEDV*LGSVLS Trigger: GGACAGGACTGACCCCAGCCAGACATCTTCAGGAGA...GTTTCCGCCCATCCGTTGCTCCTCCTCCCTCGCTTCCGCCCATCCGTTGCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR GCA 90 bp | GGAGCAACGGATGGGCGGAAGCGAGGGAGGAGGAGCAACGGATGGGCGGAAACGCGTGTATTTGGCAGGTaGTGTGCACAGAACTCGGAA | + |
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Preference number: 4 (lower is better) Translates to: GATDGRKRGRRSNGWAETRVFGR*CAQNSE Trigger: TTCCGAGTTCTGTGCACAGCACCTGCCAAATACACG...CGTTTCCGCCCATCCGTTGCTCCTCCTCCCTCGCTTCCGCCCATCCGTTGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR CCA 90 bp | TGGGCGGAAGCGAGGGAGGAGGAGCAAGGTGCAAACATCACAGTGGCTGCCTTACTCCAGGGGGTACGCTaGGGCTCGAAGAACAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: WAEAREEEQGANITVAALLQGVR*GSKNRG Trigger: ACCTCTGTTCTTCGAGCCCCAGCGTACCCCCTGGAG...TAAGGCAGCCACTGTGATGTTTGCACCTTGCTCCTCCTCCCTCGCTTCCGCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR CCA 90 bp | GGATGGGCGGAAGCGAGGGAGGAGGAGCAAGGTGCAAACATCACAGTGGCTGCCTCTCCTGAAGATGTCTaGCTGGGGTCAGTCCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: GWAEAREEEQGANITVAASPEDV*LGSVLS Trigger: GGACAGGACTGACCCCAGCCAGACATCTTCAGGAGA...GGCAGCCACTGTGATGTTTGCACCTTGCTCCTCCTCCCTCGCTTCCGCCCATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR GCA 90 bp | AGGAGCAACGGATGGGCGGAAGCGAGGGAGGAGGAGCAACGGATGGGCGGAAACATTTGGCAGGTGCTGTaGACAGAACTCGGAAGCGAA | + |
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Preference number: 4 (lower is better) Translates to: RSNGWAEAREEEQRMGGNIWQVL*TELGSE Trigger: TTCGCTTCCGAGTTCTGTGCACAGCACCTGCCAAAT...GTTTCCGCCCATCCGTTGCTCCTCCTCCCTCGCTTCCGCCCATCCGTTGCTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR GCA 90 bp | GGATGGGCGGAAGCGAGGGAGGAGGAGCAAGGTGCAAACATCACAGTGGCTGCCCCTCAGACAGCTCAATaGGGAATCTGTCCTGGACGT | + |
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Preference number: 4 (lower is better) Translates to: GWAEAREEEQGANITVAAPQTAQ*GICPGR Trigger: ACGTCCAGGACAGATTCCGCATTGAGCTGTCTGAGG...GGCAGCCACTGTGATGTTTGCACCTTGCTCCTCCTCCCTCGCTTCCGCCCATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR CCA 90 bp | GCAACGGATGGGCGGAAGCGAGGGAGGAGGAGCAAGGTGCAAACATCACAGTGGCGGGGTCCACTTCTCTaGTCCGCCCTGAATACTAGA | + |
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Preference number: 4 (lower is better) Translates to: ATDGRKRGRRSKVQTSQWRGPLL*SALNTR Trigger: TCTAGTATTCAGGGCGGACCAGAGAAGTGGACCCCG...CCACTGTGATGTTTGCACCTTGCTCCTCCTCCCTCGCTTCCGCCCATCCGTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR CCA 90 bp | TGGGCGGAAGCGAGGGAGGAGGAGCAAGGTGCAAACATCACAGTGGCTGCCTTAGAAGCGCAGTTCCCGTaGGGTTGTAGAGGGTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: WAEAREEEQGANITVAALEAQFP*GCRGSA Trigger: TGCTGACCCTCTACAACCCCACGGGAACTGCGCTTC...TAAGGCAGCCACTGTGATGTTTGCACCTTGCTCCTCCTCCCTCGCTTCCGCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR CCA 90 bp | GGCGGAAGCGAGGGAGGAGGAGCAAGGTGCAAACATCACAGTGGCTGCCTTAGGCTGAAGATGTCTGGCTaGGGTCAGTCCTGTCCACAC | + |
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Preference number: 4 (lower is better) Translates to: GGSEGGGARCKHHSGCLRLKMSG*GQSCPH Trigger: GTGTGGACAGGACTGACCCCAGCCAGACATCTTCAG...CCTAAGGCAGCCACTGTGATGTTTGCACCTTGCTCCTCCTCCCTCGCTTCCGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR CCA 90 bp | GCAACGGATGGGCGGAAGCGAGGGAGGAGGAGCAAGGTGCAAACATCACAGTGGCTGAAGATGTCTGGCTaGGGTCAGTCCTGTCCACAC | + |
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Preference number: 4 (lower is better) Translates to: ATDGRKRGRRSKVQTSQWLKMSG*GQSCPH Trigger: GTGTGGACAGGACTGACCCCAGCCAGACATCTTCAG...CCACTGTGATGTTTGCACCTTGCTCCTCCTCCCTCGCTTCCGCCCATCCGTTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR TCA 90 bp | TGGGCGGAAGCGAGGGAGGAGGAGCAAGGTGCAAACATCACAGTGGCTGCCTTATTCTCTGGTCCGCCCTaGATACTAGATCCGGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: WAEAREEEQGANITVAALFSGPP*ILDPGE Trigger: TTCCCCCGGATCTAGTATTCAGGGCGGACCAGAGAA...TAAGGCAGCCACTGTGATGTTTGCACCTTGCTCCTCCTCCCTCGCTTCCGCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR GCA 90 bp | CGGATGGGCGGAAGCGAGGGAGGAGGAGCAAGGTGCAAACATCACAGTGGCTGCCGTGTATTTGGCAGGTaGTGTGCACAGAACTCGGAA | + |
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Preference number: 4 (lower is better) Translates to: RMGGSEGGGARCKHHSGCRVFGR*CAQNSE Trigger: TTCCGAGTTCTGTGCACAGCACCTGCCAAATACACG...GCAGCCACTGTGATGTTTGCACCTTGCTCCTCCTCCCTCGCTTCCGCCCATCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR GCA 90 bp | GCAACGGATGGGCGGAAGCGAGGGAGGAGGAGCAAGGTGCAAACATCACAGTGGATTTGGCAGGTGCTGTaGACAGAACTCGGAAGCGAA | + |
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Preference number: 4 (lower is better) Translates to: ATDGRKRGRRSKVQTSQWIWQVL*TELGSE Trigger: TTCGCTTCCGAGTTCTGTGCACAGCACCTGCCAAAT...CCACTGTGATGTTTGCACCTTGCTCCTCCTCCCTCGCTTCCGCCCATCCGTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR CCA 90 bp | GGATGGGCGGAAGCGAGGGAGGAGGAGCAAGGTGCAAACATCACAGTGGCTGCCCGAATACCGTGTATTTaGCAGGTGCTGTGCACAGAA | + |
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Preference number: 4 (lower is better) Translates to: GWAEAREEEQGANITVAARIPCI*QVLCTE Trigger: TTCTGTGCACAGCACCTGCCAAATACACGGTATTCG...GGCAGCCACTGTGATGTTTGCACCTTGCTCCTCCTCCCTCGCTTCCGCCCATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR TCA 90 bp | GCAACGGATGGGCGGAAGCGAGGGAGGAGGAGCAAGGTGCAAACATCACAGTGGATGTCAATGCAGGACTaGGGCTTCACATATCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: ATDGRKRGRRSKVQTSQWMSMQD*GFTYPS Trigger: AGAGGGATATGTGAAGCCTCAGTCCTGCATTGACAT...CCACTGTGATGTTTGCACCTTGCTCCTCCTCCCTCGCTTCCGCCCATCCGTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR CCA 90 bp | TGTATTTTAATCAACTTGGAAAATGAGTACAAATCCCAGGTGCTTGCTGTGGGGGGACCCACCAGCTCCTaGTCCTGGGGCGCCCCACGG | + |
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Preference number: 4 (lower is better) Translates to: CILINLENEYKSQVLAVGGPTSS*SWGAPR Trigger: CCGTGGGGCGCCCCAGGACCAGGAGCTGGTGGGTCC...CCCCACAGCAAGCACCTGGGATTTGTACTCATTTTCCAAGTTGATTAAAATACA 54% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR CCA 90 bp | TGGGCGGAAGCGAGGGAGGAGGAGCAAGGTGCAAACATCACAGTGGCTGCCTTACGAATACCGTGTATTTaGCAGGTGCTGTGCACAGAA | + |
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Preference number: 4 (lower is better) Translates to: WAEAREEEQGANITVAALRIPCI*QVLCTE Trigger: TTCTGTGCACAGCACCTGCCAAATACACGGTATTCG...TAAGGCAGCCACTGTGATGTTTGCACCTTGCTCCTCCTCCCTCGCTTCCGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR CCA 90 bp | TGTATTTTAATCAACTTGGAAAATGAGTACAAATCCCAGGTGCTTGCTGTGGGGGGACGTCATAGTGGCTaGGGACGGGGGCCACGTGCC | + |
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Preference number: 4 (lower is better) Translates to: CILINLENEYKSQVLAVGGRHSG*GRGPRA Trigger: GGCACGTGGCCCCCGTCCCCAGCCACTATGACGTCC...CCCCACAGCAAGCACCTGGGATTTGTACTCATTTTCCAAGTTGATTAAAATACA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR GCA 90 bp | TGGGCGGAAGCGAGGGAGGAGGAGCAAGGTGCAAACATCACAGTGGCTGCCTTACTTCACATATCCCTCTaGATCGAATACCGTGTATTT | + |
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Preference number: 4 (lower is better) Translates to: WAEAREEEQGANITVAALLHISL*IEYRVF Trigger: AAATACACGGTATTCGATGCAGAGGGATATGTGAAG...TAAGGCAGCCACTGTGATGTTTGCACCTTGCTCCTCCTCCCTCGCTTCCGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR GCA 90 bp | TTGGAAAATGAGTACAAATCCCAGGTGCTTGCTGTGGGGAGGCTGACAATCAACCTGCCAAGCTCATCCTaGAGTGGTAGGAGCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: LENEYKSQVLAVGRLTINLPSSS*SGRSRK Trigger: CTTCCTGCTCCTACCACTGCAGGATGAGCTTGGCAG...GTTGATTGTCAGCCTCCCCACAGCAAGCACCTGGGATTTGTACTCATTTTCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR TCA 90 bp | TGTATTTTAATCAACTTGGAAAATGAGTACAAATCCCAGGTGCTTGCTGTGGGGGGCTCAGAATGTCCCTaGAGCTCCAGGGGGTACGCT | + |
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Preference number: 4 (lower is better) Translates to: CILINLENEYKSQVLAVGGSECP*SSRGYA Trigger: AGCGTACCCCCTGGAGCTTCAGGGACATTCTGAGCC...CCCCACAGCAAGCACCTGGGATTTGTACTCATTTTCCAAGTTGATTAAAATACA 49% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR TCA 90 bp | TGTATTTTAATCAACTTGGAAAATGAGTACAAATCCCAGGTGCTTGCTGTGGGGTTCTCTGGTCCGCCCTaGATACTAGATCCGGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: CILINLENEYKSQVLAVGFSGPP*ILDPGE Trigger: TTCCCCCGGATCTAGTATTCAGGGCGGACCAGAGAA...CCCCACAGCAAGCACCTGGGATTTGTACTCATTTTCCAAGTTGATTAAAATACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS-3UTR CAA 90 bp | CGGATGGGCGGAAGCGAGGGAGGAGGAGCAAGGTGCAAACATCACAGTGGCTGCGGACACGTGCAGGACTaGAGGCAGCTGGCTGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: RMGGSEGGGARCKHHSGCGHVQD*RQLAAK Trigger: CTTGGCAGCCAGCTGCCTCAAGTCCTGCACGTGTCC...GCAGCCACTGTGATGTTTGCACCTTGCTCCTCCTCCCTCGCTTCCGCCCATCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS TCA 90 bp | TGTAGAGGGTCAGCAGCTGCCGGGGTCCACTTCTCTGGTCCGCCCTaGATACTAGATCCGGGGGAAAGACCAGCACCGGGACAACGGGTC | + |
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Preference number: 5 (lower is better) Translates to: CRGSAAAGVHFSGPP*ILDPGERPAPGQRV Trigger: GACCCGTTGTCCCGGTGCTGGTCTTTCCCCCGGATCTAGTATTCAGGGCGGACCAGAGAAGTGGACCCCGGCAGCTGCTGACCCTCTACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 ENSMUST00000133705.2 ENSMUST00000154708.8 |
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| CDS TCA 90 bp | GTCCACACAGGAGGCCCTGGGTTGGGCGTTGGCTCAGAATGTCCCTaGAGCTCCAGGGGGTACGCTGGGGCTCGAAGAACAGAGGTGATG | + |
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Preference number: 5 (lower is better) Translates to: VHTGGPGLGVGSECP*SSRGYAGARRTEVM Trigger: CATCACCTCTGTTCTTCGAGCCCCAGCGTACCCCCTGGAGCTTCAGGGACATTCTGAGCCAACGCCCAACCCAGGGCCTCCTGTGTGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 ENSMUST00000154708.8 |
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| CDS CCA 90 bp | TGGCAGGTGCTGTGCACAGAACTCGGAAGCGAAGCGCAGTTCCCGTaGGGTTGTAGAGGGTCAGCAGCTGCCGGGGTCCACTTCTCTGGT | + |
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Preference number: 5 (lower is better) Translates to: WQVLCTELGSEAQFP*GCRGSAAAGVHFSG Trigger: ACCAGAGAAGTGGACCCCGGCAGCTGCTGACCCTCTACAACCCCACGGGAACTGCGCTTCGCTTCCGAGTTCTGTGCACAGCACCTGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 ENSMUST00000154708.8 |
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| CDS-3UTR CAA 90 bp | GCAACGGATGGGCGGAAGCGAGGGAGGAGGAGCAAGGTGCAAACATCACAGTGGGGACACGTGCAGGACTaGAGGCAGCTGGCTGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: ATDGRKRGRRSKVQTSQWGHVQD*RQLAAK Trigger: CTTGGCAGCCAGCTGCCTCAAGTCCTGCACGTGTCC...CCACTGTGATGTTTGCACCTTGCTCCTCCTCCCTCGCTTCCGCCCATCCGTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS GCA 90 bp | CCAGCTTCTGTCCCAGGGACACGTGCAGGACTTGAGGCAGCTGGCTaGCAAGCTCATCCTGCAGTGGTAGGAGCAGGAAGGCCACAGAGA | + |
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Preference number: 5 (lower is better) Translates to: PASVPGTRAGLEAAG*QAHPAVVGAGRPQR Trigger: TCTCTGTGGCCTTCCTGCTCCTACCACTGCAGGATGAGCTTGGCAGCCAGCTGCCTCAAGTCCTGCACGTGTCCCTGGGACAGAAGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS TCA 90 bp | TGCCAAGCTCATCCTGCAGTGGTAGGAGCAGGAAGGCCACAGAGATaGCGCCTGCCAGCAAGAAGAGCAGGAAGGAGCTGGTGGCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: CQAHPAVVGAGRPQR*RLPARRAGRSWWPA Trigger: AGCTGGCCACCAGCTCCTTCCTGCTCTTCTTGCTGGCAGGCGTCATCTCTGTGGCCTTCCTGCTCCTACCACTGCAGGATGAGCTTGGCA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS CCA 90 bp | CCTCAGACAGCTCAATGCGGAATCTGTCCTGGACGTCATAGTGGCTaGGGACGGGGGCCACGTGCCGTATCACAATGTCAATGCAGGACT | + |
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Preference number: 5 (lower is better) Translates to: PQTAQCGICPGRHSG*GRGPRAVSQCQCRT Trigger: AGTCCTGCATTGACATTGTGATACGGCACGTGGCCCCCGTCCCCAGCCACTATGACGTCCAGGACAGATTCCGCATTGAGCTGTCTGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 ENSMUST00000154708.8 |
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| CDS-3UTR CAA 90 bp | GCAACGGATGGGCGGAAGCGAGGGAGGAGGAGCAAGGTGCAAACATCACAGTGGTCGAATACCGTGTATTaGGCAGGTGCTGTGCACAGA | + |
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Preference number: 5 (lower is better) Translates to: ATDGRKRGRRSKVQTSQWSNTVY*AGAVHR Trigger: TCTGTGCACAGCACCTGCCAAATACACGGTATTCGA...CCACTGTGATGTTTGCACCTTGCTCCTCCTCCCTCGCTTCCGCCCATCCGTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS TCA 90 bp | CTGGGGACGGGGGCCACGTGCCGTATCACAATGTCAATGCAGGACTaGGGCTTCACATATCCCTCTGCATCGAATACCGTGTATTTGGCA | + |
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Preference number: 5 (lower is better) Translates to: LGTGATCRITMSMQD*GFTYPSASNTVYLA Trigger: TGCCAAATACACGGTATTCGATGCAGAGGGATATGTGAAGCCTCAGTCCTGCATTGACATTGTGATACGGCACGTGGCCCCCGTCCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 ENSMUST00000154708.8 |
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| CDS CCA 90 bp | AGGACTGAGGCTTCACATATCCCTCTGCATCGAATACCGTGTATTTaGCAGGTGCTGTGCACAGAACTCGGAAGCGAAGCGCAGTTCCCG | + |
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Preference number: 5 (lower is better) Translates to: RTEASHIPLHRIPCI*QVLCTELGSEAQFP Trigger: CGGGAACTGCGCTTCGCTTCCGAGTTCTGTGCACAGCACCTGCCAAATACACGGTATTCGATGCAGAGGGATATGTGAAGCCTCAGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 ENSMUST00000154708.8 |
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| CDS GCA 90 bp | CCGTATCACAATGTCAATGCAGGACTGAGGCTTCACATATCCCTCTaGATCGAATACCGTGTATTTGGCAGGTGCTGTGCACAGAACTCG | + |
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Preference number: 5 (lower is better) Translates to: PYHNVNAGLRLHISL*IEYRVFGRCCAQNS Trigger: CGAGTTCTGTGCACAGCACCTGCCAAATACACGGTATTCGATGCAGAGGGATATGTGAAGCCTCAGTCCTGCATTGACATTGTGATACGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 ENSMUST00000154708.8 |
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| CDS-3UTR CAA 90 bp | TTGGAAAATGAGTACAAATCCCAGGTGCTTGCTGTGGGGAGGCTGACAATCAACTCGAATACCGTGTATTaGGCAGGTGCTGTGCACAGA | + |
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Preference number: 5 (lower is better) Translates to: LENEYKSQVLAVGRLTINSNTVY*AGAVHR Trigger: TCTGTGCACAGCACCTGCCAAATACACGGTATTCGA...GTTGATTGTCAGCCTCCCCACAGCAAGCACCTGGGATTTGTACTCATTTTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS CCA 72 bp | CTGTGCACAGAACTCGGAAGCGAAGCGCAGTTCCCGTaGGGTTGTAGAGGGTCAGCAGCTGCCGGGGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: LCTELGSEAQFP*GCRGSAAAGVH Trigger: GTGGACCCCGGCAGCTGCTGACCCTCTACAACCCCACGGGAACTGCGCTTCGCTTCCGAGTTCTGTGCACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 ENSMUST00000133705.2 ENSMUST00000154708.8 |
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| CDS TCA 72 bp | TCAGCAGCTGCCGGGGTCCACTTCTCTGGTCCGCCCTaGATACTAGATCCGGGGGAAAGACCAGCACCGGGA | + |
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Preference number: 6 (lower is better) Translates to: SAAAGVHFSGPP*ILDPGERPAPG Trigger: TCCCGGTGCTGGTCTTTCCCCCGGATCTAGTATTCAGGGCGGACCAGAGAAGTGGACCCCGGCAGCTGCTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 ENSMUST00000133705.2 ENSMUST00000154708.8 |
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| CDS GCA 72 bp | GTCCCAGGGACACGTGCAGGACTTGAGGCAGCTGGCTaGCAAGCTCATCCTGCAGTGGTAGGAGCAGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: VPGTRAGLEAAG*QAHPAVVGAGR Trigger: CCTTCCTGCTCCTACCACTGCAGGATGAGCTTGGCAGCCAGCTGCCTCAAGTCCTGCACGTGTCCCTGGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS CAA 72 bp | CGCAACCAGCTTCTGTCCCAGGGACACGTGCAGGACTaGAGGCAGCTGGCTGCCAAGCTCATCCTGCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: RNQLLSQGHVQD*RQLAAKLILQW Trigger: CCACTGCAGGATGAGCTTGGCAGCCAGCTGCCTCAAGTCCTGCACGTGTCCCTGGGACAGAAGCTGGTTGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS TCA 72 bp | GCAACCAGCTTCTGTCCCAGGGACACGTGCAGGACTTaGGGCAGCTGGCTGCCAAGCTCATCCTGCAGTGGT | + |
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Preference number: 6 (lower is better) Translates to: ATSFCPRDTCRT*GSWLPSSSCSG Trigger: ACCACTGCAGGATGAGCTTGGCAGCCAGCTGCCTCAAGTCCTGCACGTGTCCCTGGGACAGAAGCTGGTTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 |
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| CDS CCA 72 bp | GCTCAATGCGGAATCTGTCCTGGACGTCATAGTGGCTaGGGACGGGGGCCACGTGCCGTATCACAATGTCAA | + |
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Preference number: 6 (lower is better) Translates to: AQCGICPGRHSG*GRGPRAVSQCQ Trigger: TTGACATTGTGATACGGCACGTGGCCCCCGTCCCCAGCCACTATGACGTCCAGGACAGATTCCGCATTGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 ENSMUST00000154708.8 |
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| CDS TCA 72 bp | GGGGCCACGTGCCGTATCACAATGTCAATGCAGGACTaGGGCTTCACATATCCCTCTGCATCGAATACCGTG | + |
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Preference number: 6 (lower is better) Translates to: GATCRITMSMQD*GFTYPSASNTV Trigger: CACGGTATTCGATGCAGAGGGATATGTGAAGCCTCAGTCCTGCATTGACATTGTGATACGGCACGTGGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 ENSMUST00000154708.8 |
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| CDS GCA 72 bp | ATATCCCTCTGCATCGAATACCGTGTATTTGGCAGGTaGTGTGCACAGAACTCGGAAGCGAAGCGCAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: ISLCIEYRVFGR*CAQNSEAKRSS Trigger: GGAACTGCGCTTCGCTTCCGAGTTCTGTGCACAGCACCTGCCAAATACACGGTATTCGATGCAGAGGGATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 ENSMUST00000154708.8 |
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| CDS CCA 72 bp | GCTTCACATATCCCTCTGCATCGAATACCGTGTATTTaGCAGGTGCTGTGCACAGAACTCGGAAGCGAAGCG | + |
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Preference number: 6 (lower is better) Translates to: ASHIPLHRIPCI*QVLCTELGSEA Trigger: CGCTTCGCTTCCGAGTTCTGTGCACAGCACCTGCCAAATACACGGTATTCGATGCAGAGGGATATGTGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 ENSMUST00000154708.8 |
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| CDS CAA 72 bp | GGCTTCACATATCCCTCTGCATCGAATACCGTGTATTaGGCAGGTGCTGTGCACAGAACTCGGAAGCGAAGC | + |
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Preference number: 6 (lower is better) Translates to: GFTYPSASNTVY*AGAVHRTRKRS Trigger: GCTTCGCTTCCGAGTTCTGTGCACAGCACCTGCCAAATACACGGTATTCGATGCAGAGGGATATGTGAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 ENSMUST00000154708.8 |
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| CDS GCA 72 bp | AATGTCAATGCAGGACTGAGGCTTCACATATCCCTCTaGATCGAATACCGTGTATTTGGCAGGTGCTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: NVNAGLRLHISL*IEYRVFGRCCA Trigger: TGCACAGCACCTGCCAAATACACGGTATTCGATGCAGAGGGATATGTGAAGCCTCAGTCCTGCATTGACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037620.14 ENSMUST00000111007.8 ENSMUST00000154708.8 |
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