Pregenerated sensors for MOSPD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061778Ensembl transcript IDs: ENSMUST00000004715.2, ENSMUST00000112247.9, ENSMUST00000112248.9
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCTTCCATGTGCTGCTTTATTTCCTTGTAGGAAGCCCAGATGTGTaGAAAGGTTTGGGTGGGATCTGTATACCTTCTCCAGATAATGCC | + |
|
Preference number: 1 (lower is better) Translates to: PFHVLLYFLVGSPDV*KGLGGICIPSPDNA Trigger: GGCATTATCTGGAGAAGGTATACAGATCCCACCCAAACCTTTCCACACATCTGGGCTTCCTACAAGGAAATAAAGCAGCACATGGAAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| 3UTR-3UTR CCA 90 bp | CTAGCCAAACAACTCATTTCCAAGATAGGCACCCTTCCATGTGCTGCTTTATTTGGAAGCCCAGATGTGTaGAAAGGTTTGGGTGGGATC | + |
|
Preference number: 2 (lower is better) Translates to: LAKQLISKIGTLPCAALFGSPDV*KGLGGI Trigger: GATCCCACCCAAACCTTTCCACACATCTGGGCTTCC...AAATAAAGCAGCACATGGAAGGGTGCCTATCTTGGAAATGAGTTGTTTGGCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGCTGCTTTATTTCCTTGTAGGAAGCCCAGATGTGTGGAAAGGTTTGGGTGGGTCTCCAGATAATGCCTaGAGGAGTTTTATGGTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: VLLYFLVGSPDVWKGLGGSPDNA*RSFMVL Trigger: CAAAACCATAAAACTCCTTCAGGCATTATCTGGAGA...CCCACCCAAACCTTTCCACACATCTGGGCTTCCTACAAGGAAATAAAGCAGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| 3UTR-3UTR TCA 90 bp | TCACATTCACCACACAGAAATGCTAACAAGATGTTACTAAATTCAACTGACCAGCTTGGGAAGTCACTGTaGACATACAGGGACATAGTA | + |
|
Preference number: 2 (lower is better) Translates to: SHSPHRNANKMLLNSTDQLGKSL*TYRDIV Trigger: TACTATGTCCCTGTATGTTCACAGTGACTTCCCAAG...CTGGTCAGTTGAATTTAGTAACATCTTGTTAGCATTTCTGTGTGGTGAATGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| 3UTR-3UTR TCA 90 bp | TTTCCCAAAGTCCTTTTTAGTCACATTCACCACACAGAAATGCTAACAAGATGTCTGGAGGTGGCAAACTaGAACAGAAAAACCCACATT | + |
|
Preference number: 2 (lower is better) Translates to: FPKVLFSHIHHTEMLTRCLEVAN*NRKTHI Trigger: AATGTGGGTTTTTCTGTTTCAGTTTGCCACCTCCAG...ACATCTTGTTAGCATTTCTGTGTGGTGAATGTGACTAAAAAGGACTTTGGGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112247.9 |
||
| 3UTR-3UTR CCA 90 bp | TTTCCCAAAGTCCTTTTTAGTCACATTCACCACACAGAAATGCTAACAAGATGTCCCAACTCTACCACTTaGGAAGTCACTGTGAACATA | + |
|
Preference number: 2 (lower is better) Translates to: FPKVLFSHIHHTEMLTRCPNSTT*EVTVNI Trigger: TATGTTCACAGTGACTTCCCAAGTGGTAGAGTTGGG...ACATCTTGTTAGCATTTCTGTGTGGTGAATGTGACTAAAAAGGACTTTGGGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| 3UTR-3UTR CCA 90 bp | ATGAAATTTGAGACTAGGTTAACCAGCATTTGTATTTTAGGCTACTTGCAGATCCCCAACTCTACCACTTaGGAAGTCACTGTGAACATA | + |
|
Preference number: 2 (lower is better) Translates to: MKFETRLTSICILGYLQIPNSTT*EVTVNI Trigger: TATGTTCACAGTGACTTCCCAAGTGGTAGAGTTGGG...GATCTGCAAGTAGCCTAAAATACAAATGCTGGTTAACCTAGTCTCAAATTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| 3UTR-3UTR TCA 90 bp | TTTCCCAAAGTCCTTTTTAGTCACATTCACCACACAGAAATGCTAACAAGATGTGTTACTAAATTCAACTaGCCAGACAACAAGCAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: FPKVLFSHIHHTEMLTRCVTKFN*PDNKQR Trigger: TCTTTGCTTGTTGTCTGGTCAGTTGAATTTAGTAAC...ACATCTTGTTAGCATTTCTGTGTGGTGAATGTGACTAAAAAGGACTTTGGGAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| 3UTR-3UTR TCA 90 bp | ATGAAATTTGAGACTAGGTTAACCAGCATTTGTATTTTAGGCTACTTGCAGATCGTTACTAAATTCAACTaGCCAGACAACAAGCAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: MKFETRLTSICILGYLQIVTKFN*PDNKQR Trigger: TCTTTGCTTGTTGTCTGGTCAGTTGAATTTAGTAAC...GATCTGCAAGTAGCCTAAAATACAAATGCTGGTTAACCTAGTCTCAAATTTCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| 3UTR-3UTR TCA 90 bp | ATGAAATTTGAGACTAGGTTAACCAGCATTTGTATTTTAGGCTACTTGCAGATCGAGTCCAGTTACTGTTaGCATTATGTTAATTTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: MKFETRLTSICILGYLQIESSYC*HYVNFP Trigger: TGGGAAATTAACATAATGTCAACAGTAACTGGACTC...GATCTGCAAGTAGCCTAAAATACAAATGCTGGTTAACCTAGTCTCAAATTTCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| 3UTR TCA 72 bp | CCTCCAAACTCGGTCTGGGAATCAACGGCTTCAAGATaGGAGCCCCCAACTCTACTCCTGAGAAGAACAACT | + |
|
Preference number: 3 (lower is better) Translates to: PPNSVWESTASR*EPPTLLLRRTT Trigger: AGTTGTTCTTCTCAGGAGTAGAGTTGGGGGCTCTCATCTTGAAGCCGTTGATTCCCAGACCGAGTTTGGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112247.9 |
||
| 3UTR TCA 72 bp | TTAAGGCCCCCAACTCTACCACTTGGGAAGTCACTGTaGACATACAGGGACATAGTACTTAGTGTGGACTGC | + |
|
Preference number: 3 (lower is better) Translates to: LRPPTLPLGKSL*TYRDIVLSVDC Trigger: GCAGTCCACACTAAGTACTATGTCCCTGTATGTTCACAGTGACTTCCCAAGTGGTAGAGTTGGGGGCCTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112247.9 |
||
| 3UTR-3UTR CAA 90 bp | TCACATTCACCACACAGAAATGCTAACAAGATGTTACTAAATTCAACTGACCAGCCCCAACTCTACCACTaGGGAAGTCACTGTGAACAT | + |
|
Preference number: 3 (lower is better) Translates to: SHSPHRNANKMLLNSTDQPQLYH*GSHCEH Trigger: ATGTTCACAGTGACTTCCCAAGTGGTAGAGTTGGGG...CTGGTCAGTTGAATTTAGTAACATCTTGTTAGCATTTCTGTGTGGTGAATGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCCAAAGTCCTTTTTAGTCACATTCACCACACAGAAATGCTAACAAGATGTCCCCAACTCTACCACTaGGGAAGTCACTGTGAACAT | + |
|
Preference number: 3 (lower is better) Translates to: FPKVLFSHIHHTEMLTRCPQLYH*GSHCEH Trigger: ATGTTCACAGTGACTTCCCAAGTGGTAGAGTTGGGG...ACATCTTGTTAGCATTTCTGTGTGGTGAATGTGACTAAAAAGGACTTTGGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR TCA 90 bp | GGAATCAACGGCTTCAAGATGAGAGCCCCCAACTCTACTCCTGAGAAGAACAACACCTCTTTCCAGAACTaGCTCAGTTCTGCAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GINGFKMRAPNSTPEKNNTSFQN*LSSAGP Trigger: TGGGCCTGCAGAACTGAGTCAGTTCTGGAAAGAGGT...GTTGTTCTTCTCAGGAGTAGAGTTGGGGGCTCTCATCTTGAAGCCGTTGATTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112247.9 |
||
| CDS-3UTR GCA 90 bp | CAAACTCGGTCTGGGAATCAACGGCTTCAAGATGAGAGCCCCCAACTCTACTCCTCGTTCCAACCAGAATaGTATGAGCTTCTTCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QTRSGNQRLQDESPQLYSSFQPE*YELLLV Trigger: GACAAGAAGAAGCTCATAGCATTCTGGTTGGAACGA...GGAGTAGAGTTGGGGGCTCTCATCTTGAAGCCGTTGATTCCCAGACCGAGTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112247.9 |
||
| CDS-3UTR GCA 90 bp | CAAACTCGGTCTGGGAATCAACGGCTTCAAGATGAGAGCCCCCAACTCTACTCCAGAGGACTTTCTTCTTaGAGGTACAGATCTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: QTRSGNQRLQDESPQLYSRGLSS*RYRSSL Trigger: CAGTGAAGATCTGTACCTGCAAGAAGAAAGTCCTCT...GGAGTAGAGTTGGGGGCTCTCATCTTGAAGCCGTTGATTCCCAGACCGAGTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112247.9 |
||
| CDS-3UTR TCA 90 bp | GGAATCAACGGCTTCAAGATGAGAGCCCCCAACTCTACTCCTGAGAAGAACAACAACTCTTTCCTCCACTaGAAACTCTCGTCAAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: GINGFKMRAPNSTPEKNNNSFLH*KLSSSI Trigger: GATGCTTGACGAGAGTTTTCAGTGGAGGAAAGAGTT...GTTGTTCTTCTCAGGAGTAGAGTTGGGGGCTCTCATCTTGAAGCCGTTGATTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112247.9 |
||
| CDS-3UTR CCA 90 bp | GGAATCAACGGCTTCAAGATGAGAGCCCCCAACTCTACTCCTGAGAAGAACAACTCCCGTTTTCTCTCTTaGCATATCGTTCCAACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GINGFKMRAPNSTPEKNNSRFLS*HIVPTR Trigger: TCTGGTTGGAACGATATGCCAAGAGAGAAAACGGGA...GTTGTTCTTCTCAGGAGTAGAGTTGGGGGCTCTCATCTTGAAGCCGTTGATTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112247.9 |
||
| CDS-3UTR CCA 90 bp | CTAGCCAAACAACTCATTTCCAAGATAGGCACCCTTCCATGTGCTGCTTTATTTTCTGTCCCACCCATGTaGGGAGGCAGGTATTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LAKQLISKIGTLPCAALFSVPPM*GGRYST Trigger: TGTGGAATACCTGCCTCCCCACATGGGTGGGACAGA...AAATAAAGCAGCACATGGAAGGGTGCCTATCTTGGAAATGAGTTGTTTGGCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR TCA 90 bp | GGAATCAACGGCTTCAAGATGAGAGCCCCCAACTCTACTCCTGAGAAGAACAACCCAACCAGAATGCTATaGGCTTCTTCTTGTCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: GINGFKMRAPNSTPEKNNPTRML*ASSCPL Trigger: TAATGGACAAGAAGAAGCTCATAGCATTCTGGTTGG...GTTGTTCTTCTCAGGAGTAGAGTTGGGGGCTCTCATCTTGAAGCCGTTGATTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112247.9 |
||
| CDS-3UTR TCA 90 bp | CTAGCCAAACAACTCATTTCCAAGATAGGCACCCTTCCATGTGCTGCTTTATTTACCTCTTTCCAGAACTaGCTCAGTTCTGCAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LAKQLISKIGTLPCAALFTSFQN*LSSAGP Trigger: TGGGCCTGCAGAACTGAGTCAGTTCTGGAAAGAGGT...AAATAAAGCAGCACATGGAAGGGTGCCTATCTTGGAAATGAGTTGTTTGGCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR TCA 90 bp | GTGCTGCTTTATTTCCTTGTAGGAAGCCCAGATGTGTGGAAAGGTTTGGGTGGGTTCACTGGTTTTATCTaGCATGGTGGAAATGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLLYFLVGSPDVWKGLGGFTGFI*HGGNAV Trigger: GACAGCATTTCCACCATGTCAGATAAAACCAGTGAA...CCCACCCAAACCTTTCCACACATCTGGGCTTCCTACAAGGAAATAAAGCAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR CCA 90 bp | GGAATCAACGGCTTCAAGATGAGAGCCCCCAACTCTACTCCTGAGAAGAACAACATCATCTACCAGTGGTaGGTAGCTATACTTGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: GINGFKMRAPNSTPEKNNIIYQW*VAILEW Trigger: CCATTCAAGTATAGCTACCCACCACTGGTAGATGAT...GTTGTTCTTCTCAGGAGTAGAGTTGGGGGCTCTCATCTTGAAGCCGTTGATTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112247.9 |
||
| CDS-3UTR CCA 90 bp | CCCTTCCATGTGCTGCTTTATTTCCTTGTAGGAAGCCCAGATGTGTGGAAAGGTAGGTTTCATCCTCACTaGCAATTGGCCCATTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PFHVLLYFLVGSPDVWKGRFHPH*QLAHFH Trigger: GTGAAAATGGGCCAATTGCCAGTGAGGATGAAACCT...ACCTTTCCACACATCTGGGCTTCCTACAAGGAAATAAAGCAGCACATGGAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR CCA 90 bp | GTGCTGCTTTATTTCCTTGTAGGAAGCCCAGATGTGTGGAAAGGTTTGGGTGGGGGTACAGATCTTCACTaGTTTTATCTGACATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLLYFLVGSPDVWKGLGGGTDLH*FYLTWW Trigger: CCACCATGTCAGATAAAACCAGTGAAGATCTGTACC...CCCACCCAAACCTTTCCACACATCTGGGCTTCCTACAAGGAAATAAAGCAGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR TCA 90 bp | CATAGACAGATACTTTGGGATGACATTATATTAAGGCCCCCAACTCTACCACTTACCTCTTTCCAGAACTaGCTCAGTTCTGCAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HRQILWDDIILRPPTLPLTSFQN*LSSAGP Trigger: TGGGCCTGCAGAACTGAGTCAGTTCTGGAAAGAGGT...AAGTGGTAGAGTTGGGGGCCTTAATATAATGTCATCCCAAAGTATCTGTCTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR GCA 90 bp | CATAGACAGATACTTTGGGATGACATTATATTAAGGCCCCCAACTCTACCACTTGTTCTGCAGGCCCAGTaGCAGATGACTGCTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: HRQILWDDIILRPPTLPLVLQAQ*QMTAPF Trigger: AAATGGAGCAGTCATCTGGCACTGGGCCTGCAGAAC...AAGTGGTAGAGTTGGGGGCCTTAATATAATGTCATCCCAAAGTATCTGTCTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR CCA 90 bp | CTCTCTAGCCAAACAACTCATTTCCAAGATAGGCACCCTTCCATGTGCTGCTTTTCCCGTTTTCTCTCTTaGCATATCGTTCCAACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSSQTTHFQDRHPSMCCFSRFLS*HIVPTR Trigger: TCTGGTTGGAACGATATGCCAAGAGAGAAAACGGGA...AAAGCAGCACATGGAAGGGTGCCTATCTTGGAAATGAGTTGTTTGGCTAGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR CCA 90 bp | CAATGCCTCAAACGTCTCTCTAGCCAAACAACTCATTTCCAAGATAGGCACCCTATCCTCACTGGCAATTaGCCCATTTTCACAAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QCLKRLSSQTTHFQDRHPILTGN*PIFTKW Trigger: CCACTTTGTGAAAATGGGCCAATTGCCAGTGAGGAT...AGGGTGCCTATCTTGGAAATGAGTTGTTTGGCTAGAGAGACGTTTGAGGCATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| 3UTR CAA 72 bp | TATTTCCTTGTAGGAAGCCCAGATGTGTGGAAAGGTTaGGGTGGGATCTGTATACCTTCTCCAGATAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: YFLVGSPDVWKG*GGICIPSPDNA Trigger: GGCATTATCTGGAGAAGGTATACAGATCCCACCCAAACCTTTCCACACATCTGGGCTTCCTACAAGGAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR TCA 90 bp | TCTCTAGCCAAACAACTCATTTCCAAGATAGGCACCCTTCCATGTGCTGCTTTAAACTCTTTCCTCCACTaGAAACTCTCGTCAAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SLAKQLISKIGTLPCAALNSFLH*KLSSSI Trigger: GATGCTTGACGAGAGTTTTCAGTGGAGGAAAGAGTT...TAAAGCAGCACATGGAAGGGTGCCTATCTTGGAAATGAGTTGTTTGGCTAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR TCA 90 bp | CAGATGTGTGGAAAGGTTTGGGTGGGATCTGTATACCTTCTCCAGATAATGCCTCCAACCAGAATGCTATaGGCTTCTTCTTGTCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: QMCGKVWVGSVYLLQIMPPTRML*ASSCPL Trigger: TAATGGACAAGAAGAAGCTCATAGCATTCTGGTTGG...AGGCATTATCTGGAGAAGGTATACAGATCCCACCCAAACCTTTCCACACATCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR CCA 90 bp | TTTCCCAAAGTCCTTTTTAGTCACATTCACCACACAGAAATGCTAACAAGATGTTCTGTCCCACCCATGTaGGGAGGCAGGTATTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: FPKVLFSHIHHTEMLTRCSVPPM*GGRYST Trigger: TGTGGAATACCTGCCTCCCCACATGGGTGGGACAGA...ACATCTTGTTAGCATTTCTGTGTGGTGAATGTGACTAAAAAGGACTTTGGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR CCA 90 bp | GCCAAACAACTCATTTCCAAGATAGGCACCCTTCCATGTGCTGCTTTATTTCCTGTAGCTATACTTGAATaGATCTGTCCCACCCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: AKQLISKIGTLPCAALFPVAILE*ICPTHV Trigger: CACATGGGTGGGACAGATCCATTCAAGTATAGCTAC...AGGAAATAAAGCAGCACATGGAAGGGTGCCTATCTTGGAAATGAGTTGTTTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR CCA 90 bp | CTCTCTAGCCAAACAACTCATTTCCAAGATAGGCACCCTTCCATGTGCTGCTTTATCATCTACCAGTGGTaGGTAGCTATACTTGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LSSQTTHFQDRHPSMCCFIIYQW*VAILEW Trigger: CCATTCAAGTATAGCTACCCACCACTGGTAGATGAT...AAAGCAGCACATGGAAGGGTGCCTATCTTGGAAATGAGTTGTTTGGCTAGAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR CCA 90 bp | ATTTCCAAGATAGGCACCCTTCCATGTGCTGCTTTATTTCCTTGTAGGAAGCCCGTCATCATCTACCAGTaGTGGGTAGCTATACTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ISKIGTLPCAALFPCRKPVIIYQ*WVAILE Trigger: TTCAAGTATAGCTACCCACCACTGGTAGATGATGAC...GGGCTTCCTACAAGGAAATAAAGCAGCACATGGAAGGGTGCCTATCTTGGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR CCA 90 bp | GCCAAACAACTCATTTCCAAGATAGGCACCCTTCCATGTGCTGCTTTATTTCCTTTCAGACAGAGCTGGTaGCTCCTCATTAGAAATCGT | + |
|
Preference number: 4 (lower is better) Translates to: AKQLISKIGTLPCAALFPFRQSW*LLIRNR Trigger: ACGATTTCTAATGAGGAGCCACCAGCTCTGTCTGAA...AGGAAATAAAGCAGCACATGGAAGGGTGCCTATCTTGGAAATGAGTTGTTTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR CCA 90 bp | CTCTCTAGCCAAACAACTCATTTCCAAGATAGGCACCCTTCCATGTGCTGCTTTCATCACCTTGTTTCTTaGAACCTCTTTCCAGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LSSQTTHFQDRHPSMCCFHHLVS*NLFPEL Trigger: CAGTTCTGGAAAGAGGTTCCAAGAAACAAGGTGATG...AAAGCAGCACATGGAAGGGTGCCTATCTTGGAAATGAGTTGTTTGGCTAGAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR TCA 90 bp | GCCAAACAACTCATTTCCAAGATAGGCACCCTTCCATGTGCTGCTTTATTTCCTCAGTTATCATCTTGCTaGAGCCTTTCAACATCACGT | + |
|
Preference number: 4 (lower is better) Translates to: AKQLISKIGTLPCAALFPQLSSC*SLSTSR Trigger: ACGTGATGTTGAAAGGCTTCAGCAAGATGATAACTG...AGGAAATAAAGCAGCACATGGAAGGGTGCCTATCTTGGAAATGAGTTGTTTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTAGCCAAACAACTCATTTCCAAGATAGGCACCCTTCCATGTGCTGCTTTATCGTTCCAACCAGAATaGTATGAGCTTCTTCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLAKQLISKIGTLPCAALSFQPE*YELLLV Trigger: GACAAGAAGAAGCTCATAGCATTCTGGTTGGAACGA...TAAAGCAGCACATGGAAGGGTGCCTATCTTGGAAATGAGTTGTTTGGCTAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR GCA 90 bp | TCTAATAATCAATGCCTCAAACGTCTCTCTAGCCAAACAACTCATTTCCAAGATCTTCAACAAGCTTACTaGTTCGGGGCCAAGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SNNQCLKRLSSQTTHFQDLQQAY*FGAKPA Trigger: AGCTGGCTTGGCCCCGAAGCAGTAAGCTTGTTGAAG...ATCTTGGAAATGAGTTGTTTGGCTAGAGAGACGTTTGAGGCATTGATTATTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR GCA 90 bp | TCACATTCACCACACAGAAATGCTAACAAGATGTTACTAAATTCAACTGACCAGCTTCAACAAGCTTACTaGTTCGGGGCCAAGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SHSPHRNANKMLLNSTDQLQQAY*FGAKPA Trigger: AGCTGGCTTGGCCCCGAAGCAGTAAGCTTGTTGAAG...CTGGTCAGTTGAATTTAGTAACATCTTGTTAGCATTTCTGTGTGGTGAATGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR GCA 90 bp | TCTAATAATCAATGCCTCAAACGTCTCTCTAGCCAAACAACTCATTTCCAAGATGTTCTGCAGGCCCAGTaGCAGATGACTGCTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: SNNQCLKRLSSQTTHFQDVLQAQ*QMTAPF Trigger: AAATGGAGCAGTCATCTGGCACTGGGCCTGCAGAAC...ATCTTGGAAATGAGTTGTTTGGCTAGAGAGACGTTTGAGGCATTGATTATTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR GCA 90 bp | TTTCCCAAAGTCCTTTTTAGTCACATTCACCACACAGAAATGCTAACAAGATGTGTTCTGCAGGCCCAGTaGCAGATGACTGCTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: FPKVLFSHIHHTEMLTRCVLQAQ*QMTAPF Trigger: AAATGGAGCAGTCATCTGGCACTGGGCCTGCAGAAC...ACATCTTGTTAGCATTTCTGTGTGGTGAATGTGACTAAAAAGGACTTTGGGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR GCA 90 bp | CTCTCTAGCCAAACAACTCATTTCCAAGATAGGCACCCTTCCATGTGCTGCTTTAGTAAACGATTGAGTTaGAGGTACAGATCTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LSSQTTHFQDRHPSMCCFSKRLS*RYRSSL Trigger: CAGTGAAGATCTGTACCTGCAACTCAATCGTTTACT...AAAGCAGCACATGGAAGGGTGCCTATCTTGGAAATGAGTTGTTTGGCTAGAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTAGCCAAACAACTCATTTCCAAGATAGGCACCCTTCCATGTGCTGCTTTACTTTTCAGACAGAGCTaGTGGCTCCTCATTAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SLAKQLISKIGTLPCAALLFRQS*WLLIRN Trigger: ATTTCTAATGAGGAGCCACCAGCTCTGTCTGAAAAG...TAAAGCAGCACATGGAAGGGTGCCTATCTTGGAAATGAGTTGTTTGGCTAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR CCA 90 bp | CATAGACAGATACTTTGGGATGACATTATATTAAGGCCCCCAACTCTACCACTTTCCCGTTTTCTCTCTTaGCATATCGTTCCAACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HRQILWDDIILRPPTLPLSRFLS*HIVPTR Trigger: TCTGGTTGGAACGATATGCCAAGAGAGAAAACGGGA...AAGTGGTAGAGTTGGGGGCCTTAATATAATGTCATCCCAAAGTATCTGTCTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR CCA 90 bp | CATAGACAGATACTTTGGGATGACATTATATTAAGGCCCCCAACTCTACCACTTAGGTTTCATCCTCACTaGCAATTGGCCCATTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HRQILWDDIILRPPTLPLRFHPH*QLAHFH Trigger: GTGAAAATGGGCCAATTGCCAGTGAGGATGAAACCT...AAGTGGTAGAGTTGGGGGCCTTAATATAATGTCATCCCAAAGTATCTGTCTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR CCA 90 bp | CATAGACAGATACTTTGGGATGACATTATATTAAGGCCCCCAACTCTACCACTTATCATCTACCAGTGGTaGGTAGCTATACTTGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: HRQILWDDIILRPPTLPLIIYQW*VAILEW Trigger: CCATTCAAGTATAGCTACCCACCACTGGTAGATGAT...AAGTGGTAGAGTTGGGGGCCTTAATATAATGTCATCCCAAAGTATCTGTCTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR CCA 90 bp | CATAGACAGATACTTTGGGATGACATTATATTAAGGCCCCCAACTCTACCACTTCTTTTCAGACAGAGCTaGTGGCTCCTCATTAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HRQILWDDIILRPPTLPLLFRQS*WLLIRN Trigger: ATTTCTAATGAGGAGCCACCAGCTCTGTCTGAAAAG...AAGTGGTAGAGTTGGGGGCCTTAATATAATGTCATCCCAAAGTATCTGTCTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR CCA 90 bp | CATAGACAGATACTTTGGGATGACATTATATTAAGGCCCCCAACTCTACCACTTCATCACCTTGTTTCTTaGAACCTCTTTCCAGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: HRQILWDDIILRPPTLPLHHLVS*NLFPEL Trigger: CAGTTCTGGAAAGAGGTTCCAAGAAACAAGGTGATG...AAGTGGTAGAGTTGGGGGCCTTAATATAATGTCATCCCAAAGTATCTGTCTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR CCA 90 bp | TTTCCCAAAGTCCTTTTTAGTCACATTCACCACACAGAAATGCTAACAAGATGTGTAGCTATACTTGAATaGATCTGTCCCACCCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: FPKVLFSHIHHTEMLTRCVAILE*ICPTHV Trigger: CACATGGGTGGGACAGATCCATTCAAGTATAGCTAC...ACATCTTGTTAGCATTTCTGTGTGGTGAATGTGACTAAAAAGGACTTTGGGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR CCA 90 bp | TCACATTCACCACACAGAAATGCTAACAAGATGTTACTAAATTCAACTGACCAGATCCTCACTGGCAATTaGCCCATTTTCACAAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SHSPHRNANKMLLNSTDQILTGN*PIFTKW Trigger: CCACTTTGTGAAAATGGGCCAATTGCCAGTGAGGAT...CTGGTCAGTTGAATTTAGTAACATCTTGTTAGCATTTCTGTGTGGTGAATGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR CCA 90 bp | TTTCCCAAAGTCCTTTTTAGTCACATTCACCACACAGAAATGCTAACAAGATGTAGGTTTCATCCTCACTaGCAATTGGCCCATTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FPKVLFSHIHHTEMLTRCRFHPH*QLAHFH Trigger: GTGAAAATGGGCCAATTGCCAGTGAGGATGAAACCT...ACATCTTGTTAGCATTTCTGTGTGGTGAATGTGACTAAAAAGGACTTTGGGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR CCA 90 bp | TCACATTCACCACACAGAAATGCTAACAAGATGTTACTAAATTCAACTGACCAGTTCAGACAGAGCTGGTaGCTCCTCATTAGAAATCGT | + |
|
Preference number: 4 (lower is better) Translates to: SHSPHRNANKMLLNSTDQFRQSW*LLIRNR Trigger: ACGATTTCTAATGAGGAGCCACCAGCTCTGTCTGAA...CTGGTCAGTTGAATTTAGTAACATCTTGTTAGCATTTCTGTGTGGTGAATGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR TCA 90 bp | TCACATTCACCACACAGAAATGCTAACAAGATGTTACTAAATTCAACTGACCAGCAGTTATCATCTTGCTaGAGCCTTTCAACATCACGT | + |
|
Preference number: 4 (lower is better) Translates to: SHSPHRNANKMLLNSTDQQLSSC*SLSTSR Trigger: ACGTGATGTTGAAAGGCTTCAGCAAGATGATAACTG...CTGGTCAGTTGAATTTAGTAACATCTTGTTAGCATTTCTGTGTGGTGAATGTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR TCA 90 bp | ATGAAATTTGAGACTAGGTTAACCAGCATTTGTATTTTAGGCTACTTGCAGATCAACTCTTTCCTCCACTaGAAACTCTCGTCAAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: MKFETRLTSICILGYLQINSFLH*KLSSSI Trigger: GATGCTTGACGAGAGTTTTCAGTGGAGGAAAGAGTT...GATCTGCAAGTAGCCTAAAATACAAATGCTGGTTAACCTAGTCTCAAATTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR TCA 90 bp | TTTCCCAAAGTCCTTTTTAGTCACATTCACCACACAGAAATGCTAACAAGATGTCCAACCAGAATGCTATaGGCTTCTTCTTGTCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: FPKVLFSHIHHTEMLTRCPTRML*ASSCPL Trigger: TAATGGACAAGAAGAAGCTCATAGCATTCTGGTTGG...ACATCTTGTTAGCATTTCTGTGTGGTGAATGTGACTAAAAAGGACTTTGGGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR TCA 90 bp | TTTCCCAAAGTCCTTTTTAGTCACATTCACCACACAGAAATGCTAACAAGATGTTTCACTGGTTTTATCTaGCATGGTGGAAATGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FPKVLFSHIHHTEMLTRCFTGFI*HGGNAV Trigger: GACAGCATTTCCACCATGTCAGATAAAACCAGTGAA...ACATCTTGTTAGCATTTCTGTGTGGTGAATGTGACTAAAAAGGACTTTGGGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR TCA 90 bp | TCACATTCACCACACAGAAATGCTAACAAGATGTTACTAAATTCAACTGACCAGTTCACTGGTTTTATCTaGCATGGTGGAAATGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SHSPHRNANKMLLNSTDQFTGFI*HGGNAV Trigger: GACAGCATTTCCACCATGTCAGATAAAACCAGTGAA...CTGGTCAGTTGAATTTAGTAACATCTTGTTAGCATTTCTGTGTGGTGAATGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR GCA 90 bp | TTTCCCAAAGTCCTTTTTAGTCACATTCACCACACAGAAATGCTAACAAGATGTTCGTTCCAACCAGAATaGTATGAGCTTCTTCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FPKVLFSHIHHTEMLTRCSFQPE*YELLLV Trigger: GACAAGAAGAAGCTCATAGCATTCTGGTTGGAACGA...ACATCTTGTTAGCATTTCTGTGTGGTGAATGTGACTAAAAAGGACTTTGGGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR CCA 90 bp | TCACATTCACCACACAGAAATGCTAACAAGATGTTACTAAATTCAACTGACCAGGTCATCATCTACCAGTaGTGGGTAGCTATACTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SHSPHRNANKMLLNSTDQVIIYQ*WVAILE Trigger: TTCAAGTATAGCTACCCACCACTGGTAGATGATGAC...CTGGTCAGTTGAATTTAGTAACATCTTGTTAGCATTTCTGTGTGGTGAATGTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR CCA 90 bp | ATGAAATTTGAGACTAGGTTAACCAGCATTTGTATTTTAGGCTACTTGCAGATCTTCAGACAGAGCTGGTaGCTCCTCATTAGAAATCGT | + |
|
Preference number: 4 (lower is better) Translates to: MKFETRLTSICILGYLQIFRQSW*LLIRNR Trigger: ACGATTTCTAATGAGGAGCCACCAGCTCTGTCTGAA...GATCTGCAAGTAGCCTAAAATACAAATGCTGGTTAACCTAGTCTCAAATTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR CCA 90 bp | TCACATTCACCACACAGAAATGCTAACAAGATGTTACTAAATTCAACTGACCAGCTTTTCAGACAGAGCTaGTGGCTCCTCATTAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SHSPHRNANKMLLNSTDQLFRQS*WLLIRN Trigger: ATTTCTAATGAGGAGCCACCAGCTCTGTCTGAAAAG...CTGGTCAGTTGAATTTAGTAACATCTTGTTAGCATTTCTGTGTGGTGAATGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR CCA 90 bp | TTTCCCAAAGTCCTTTTTAGTCACATTCACCACACAGAAATGCTAACAAGATGTCATCACCTTGTTTCTTaGAACCTCTTTCCAGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: FPKVLFSHIHHTEMLTRCHHLVS*NLFPEL Trigger: CAGTTCTGGAAAGAGGTTCCAAGAAACAAGGTGATG...ACATCTTGTTAGCATTTCTGTGTGGTGAATGTGACTAAAAAGGACTTTGGGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR CCA 90 bp | TCACATTCACCACACAGAAATGCTAACAAGATGTTACTAAATTCAACTGACCAGGGTACAGATCTTCACTaGTTTTATCTGACATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SHSPHRNANKMLLNSTDQGTDLH*FYLTWW Trigger: CCACCATGTCAGATAAAACCAGTGAAGATCTGTACC...CTGGTCAGTTGAATTTAGTAACATCTTGTTAGCATTTCTGTGTGGTGAATGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS CCA 90 bp | CCCATTTTCACAAAGTGGTGTCTGGAAGTCATCATCTACCAGTGGTaGGTAGCTATACTTGAATGGATCTGTCCCACCCATGTGGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PIFTKWCLEVIIYQW*VAILEWICPTHVGR Trigger: CCTCCCCACATGGGTGGGACAGATCCATTCAAGTATAGCTACCCACCACTGGTAGATGATGACTTCCAGACACCACTTTGTGAAAATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004715.2 ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS CCA 90 bp | TGGCCCATTTTCACAAAGTGGTGTCTGGAAGTCATCATCTACCAGTaGTGGGTAGCTATACTTGAATGGATCTGTCCCACCCATGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: WPIFTKWCLEVIIYQ*WVAILEWICPTHVG Trigger: CCCCACATGGGTGGGACAGATCCATTCAAGTATAGCTACCCACCACTGGTAGATGATGACTTCCAGACACCACTTTGTGAAAATGGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004715.2 ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR CAA 90 bp | GTGCTGCTTTATTTCCTTGTAGGAAGCCCAGATGTGTGGAAAGGTTTGGGTGGGCTGCTGTTGCTAGGCTaGACCCTGTATTTTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VLLYFLVGSPDVWKGLGGLLLLG*TLYFSG Trigger: TCCAGAAAAATACAGGGTCAAGCCTAGCAACAGCAG...CCCACCCAAACCTTTCCACACATCTGGGCTTCCTACAAGGAAATAAAGCAGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS TCA 90 bp | CTTCACTGGTTTTATCTGACATGGTGGAAATGCTGTCCTTCAGCATaGGACTGTTCGGTTTGCTGCTCTCAACGGTGTGACATCTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LHWFYLTWWKCCPSA*DCSVCCSQRCDILA Trigger: GGCTAAGATGTCACACCGTTGAGAGCAGCAAACCGAACAGTCTCATGCTGAAGGACAGCATTTCCACCATGTCAGATAAAACCAGTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004715.2 ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS CCA 90 bp | GTCCCACCCATGTGGGGAGGCAGGTATTCCACACTGACATACTCCTaGATTTCATTCTTACTTGTAAACTTCAACAAGCTTACTGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: VPPMWGGRYSTLTYS*ISFLLVNFNKLTAS Trigger: CGAAGCAGTAAGCTTGTTGAAGTTTACAAGTAAGAATGAAATCCAGGAGTATGTCAGTGTGGAATACCTGCCTCCCCACATGGGTGGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004715.2 ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR CAA 90 bp | GGAATCAACGGCTTCAAGATGAGAGCCCCCAACTCTACTCCTGAGAAGAACAACAACCCAGTTATCATCTaGCTGAAGCCTTTCAACATC | + |
|
Preference number: 5 (lower is better) Translates to: GINGFKMRAPNSTPEKNNNPVII*LKPFNI Trigger: GATGTTGAAAGGCTTCAGCAAGATGATAACTGGGTT...GTTGTTCTTCTCAGGAGTAGAGTTGGGGGCTCTCATCTTGAAGCCGTTGATTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112247.9 |
||
| CDS-3UTR CAA 90 bp | ATTTCCAAGATAGGCACCCTTCCATGTGCTGCTTTATTTCCTTGTAGGAAGCCCTTCCCGTTTTCTCTCTaGGCATATCGTTCCAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: ISKIGTLPCAALFPCRKPFPFSL*AYRSNQ Trigger: CTGGTTGGAACGATATGCCAAGAGAGAAAACGGGAA...GGGCTTCCTACAAGGAAATAAAGCAGCACATGGAAGGGTGCCTATCTTGGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR CAA 90 bp | CAATGCCTCAAACGTCTCTCTAGCCAAACAACTCATTTCCAAGATAGGCACCCTCATCCTCACTGGCAATaGGCCCATTTTCACAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: QCLKRLSSQTTHFQDRHPHPHWQ*AHFHKV Trigger: CACTTTGTGAAAATGGGCCAATTGCCAGTGAGGATG...AGGGTGCCTATCTTGGAAATGAGTTGTTTGGCTAGAGAGACGTTTGAGGCATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR CAA 90 bp | GGAATCAACGGCTTCAAGATGAGAGCCCCCAACTCTACTCCTGAGAAGAACAACCTATATCTTCCTTACTaGAGGTTTCATCCTCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: GINGFKMRAPNSTPEKNNLYLPY*RFHPHW Trigger: CCAGTGAGGATGAAACCTCAAGTAAGGAAGATATAG...GTTGTTCTTCTCAGGAGTAGAGTTGGGGGCTCTCATCTTGAAGCCGTTGATTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112247.9 |
||
| CDS-3UTR CAA 90 bp | GAAGCCCAGATGTGTGGAAAGGTTTGGGTGGGATCTGTATACCTTCTCCAGATACCATCACCTTGTTTCTaGGAACCTCTTTCCAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: EAQMCGKVWVGSVYLLQIPSPCF*EPLSRT Trigger: AGTTCTGGAAAGAGGTTCCAAGAAACAAGGTGATGG...TATCTGGAGAAGGTATACAGATCCCACCCAAACCTTTCCACACATCTGGGCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR CAA 90 bp | CTCTCTAGCCAAACAACTCATTTCCAAGATAGGCACCCTTCCATGTGCTGCTTTCTGTGCTCCATCACCTaGTTTCTTGGAACCTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSSQTTHFQDRHPSMCCFLCSIT*FLGTSF Trigger: GAAAGAGGTTCCAAGAAACAAGGTGATGGAGCACAG...AAAGCAGCACATGGAAGGGTGCCTATCTTGGAAATGAGTTGTTTGGCTAGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR CAA 90 bp | GAAGCCCAGATGTGTGGAAAGGTTTGGGTGGGATCTGTATACCTTCTCCAGATAAACCCAGTTATCATCTaGCTGAAGCCTTTCAACATC | + |
|
Preference number: 5 (lower is better) Translates to: EAQMCGKVWVGSVYLLQINPVII*LKPFNI Trigger: GATGTTGAAAGGCTTCAGCAAGATGATAACTGGGTT...TATCTGGAGAAGGTATACAGATCCCACCCAAACCTTTCCACACATCTGGGCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS CCA 90 bp | TTTGGAAACAGACTCAGTTGGGTTACTCTTTTCAGACAGAGCTGGTaGCTCCTCATTAGAAATCGTTTCCAAGGTTTCCTTACCATCACC | + |
|
Preference number: 5 (lower is better) Translates to: FGNRLSWVTLFRQSW*LLIRNRFQGFLTIT Trigger: GGTGATGGTAAGGAAACCTTGGAAACGATTTCTAATGAGGAGCCACCAGCTCTGTCTGAAAAGAGTAACCCAACTGAGTCTGTTTCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004715.2 ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS CCA 90 bp | GTTAAGGCAAGCAGTAGCTGTTGGAACCAGATAGAGCGCTGTAGTTaGTCTTCCAGTTTCCTATTGCTTTCTAGTAAACGATTGAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: VKASSSCWNQIERCS*SSSFLLLSSKRLSC Trigger: GCAACTCAATCGTTTACTAGAAAGCAATAGGAAACTGGAAGACCAACTACAGCGCTCTATCTGGTTCCAACAGCTACTGCTTGCCTTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR CAA 90 bp | ATTTCCAAGATAGGCACCCTTCCATGTGCTGCTTTATTTCCTTGTAGGAAGCCCGATTCACTAAGGTCATaGACAGAGAACTCTTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ISKIGTLPCAALFPCRKPDSLRS*TENSFL Trigger: GAGGAAAGAGTTCTCTGTCAATGACCTTAGTGAATC...GGGCTTCCTACAAGGAAATAAAGCAGCACATGGAAGGGTGCCTATCTTGGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR CAA 90 bp | TCTCTAGCCAAACAACTCATTTCCAAGATAGGCACCCTTCCATGTGCTGCTTTAAAGCAAGCAAGACCATaGTTAAGGCAAGCAGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLAKQLISKIGTLPCAALKQARP*LRQAVA Trigger: AGCTACTGCTTGCCTTAACAATGGTCTTGCTTGCTT...TAAAGCAGCACATGGAAGGGTGCCTATCTTGGAAATGAGTTGTTTGGCTAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR CAA 90 bp | CATAGACAGATACTTTGGGATGACATTATATTAAGGCCCCCAACTCTACCACTTTTCCCGTTTTCTCTCTaGGCATATCGTTCCAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: HRQILWDDIILRPPTLPLFPFSL*AYRSNQ Trigger: CTGGTTGGAACGATATGCCAAGAGAGAAAACGGGAA...AAGTGGTAGAGTTGGGGGCCTTAATATAATGTCATCCCAAAGTATCTGTCTATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR CAA 90 bp | TCTCTAGCCAAACAACTCATTTCCAAGATAGGCACCCTTCCATGTGCTGCTTTACTATATCTTCCTTACTaGAGGTTTCATCCTCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLAKQLISKIGTLPCAALLYLPY*RFHPHW Trigger: CCAGTGAGGATGAAACCTCAAGTAAGGAAGATATAG...TAAAGCAGCACATGGAAGGGTGCCTATCTTGGAAATGAGTTGTTTGGCTAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS TCA 90 bp | ATAGAGGATTCACTAAGGTCATTGACAGAGAACTCTTTCCTCCACTaGAAACTCTCGTCAAGCATCTTCAGGGTTTCATCCACAACGTTA | + |
|
Preference number: 5 (lower is better) Translates to: IEDSLRSLTENSFLH*KLSSSIFRVSSTTL Trigger: TAACGTTGTGGATGAAACCCTGAAGATGCTTGACGAGAGTTTTCAGTGGAGGAAAGAGTTCTCTGTCAATGACCTTAGTGAATCCTCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004715.2 ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR CAA 90 bp | CTAGCCAAACAACTCATTTCCAAGATAGGCACCCTTCCATGTGCTGCTTTATTTTGGAAACAGACTCAGTaGGGTTACTCTTTTCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: LAKQLISKIGTLPCAALFWKQTQ*GYSFQT Trigger: TGTCTGAAAAGAGTAACCCAACTGAGTCTGTTTCCA...AAATAAAGCAGCACATGGAAGGGTGCCTATCTTGGAAATGAGTTGTTTGGCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR CAA 90 bp | CAATGCCTCAAACGTCTCTCTAGCCAAACAACTCATTTCCAAGATAGGCACCCTTCATTTTCATCTTTTTaGGAAACAGACTCAGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QCLKRLSSQTTHFQDRHPSFSSF*ETDSVG Trigger: CCCAACTGAGTCTGTTTCCAAAAAAGATGAAAATGA...AGGGTGCCTATCTTGGAAATGAGTTGTTTGGCTAGAGAGACGTTTGAGGCATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR CAA 90 bp | CATAGACAGATACTTTGGGATGACATTATATTAAGGCCCCCAACTCTACCACTTCAGAGGACTTTCTTCTaGCAGGTACAGATCTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: HRQILWDDIILRPPTLPLQRTFF*QVQIFT Trigger: AGTGAAGATCTGTACCTGCAAGAAGAAAGTCCTCTG...AAGTGGTAGAGTTGGGGGCCTTAATATAATGTCATCCCAAAGTATCTGTCTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112247.9 |
||
| CDS-3UTR CAA 90 bp | CATAGACAGATACTTTGGGATGACATTATATTAAGGCCCCCAACTCTACCACTTGATTCACTAAGGTCATaGACAGAGAACTCTTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HRQILWDDIILRPPTLPLDSLRS*TENSFL Trigger: GAGGAAAGAGTTCTCTGTCAATGACCTTAGTGAATC...AAGTGGTAGAGTTGGGGGCCTTAATATAATGTCATCCCAAAGTATCTGTCTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR CAA 90 bp | TTTCCCAAAGTCCTTTTTAGTCACATTCACCACACAGAAATGCTAACAAGATGTTTCCCGTTTTCTCTCTaGGCATATCGTTCCAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: FPKVLFSHIHHTEMLTRCFPFSL*AYRSNQ Trigger: CTGGTTGGAACGATATGCCAAGAGAGAAAACGGGAA...ACATCTTGTTAGCATTTCTGTGTGGTGAATGTGACTAAAAAGGACTTTGGGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR CAA 90 bp | TCACATTCACCACACAGAAATGCTAACAAGATGTTACTAAATTCAACTGACCAGCATCCTCACTGGCAATaGGCCCATTTTCACAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SHSPHRNANKMLLNSTDQHPHWQ*AHFHKV Trigger: CACTTTGTGAAAATGGGCCAATTGCCAGTGAGGATG...CTGGTCAGTTGAATTTAGTAACATCTTGTTAGCATTTCTGTGTGGTGAATGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR CAA 90 bp | TTTCCCAAAGTCCTTTTTAGTCACATTCACCACACAGAAATGCTAACAAGATGTCATCCTCACTGGCAATaGGCCCATTTTCACAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: FPKVLFSHIHHTEMLTRCHPHWQ*AHFHKV Trigger: CACTTTGTGAAAATGGGCCAATTGCCAGTGAGGATG...ACATCTTGTTAGCATTTCTGTGTGGTGAATGTGACTAAAAAGGACTTTGGGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR CAA 90 bp | CATAGACAGATACTTTGGGATGACATTATATTAAGGCCCCCAACTCTACCACTTTGGAAACAGACTCAGTaGGGTTACTCTTTTCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: HRQILWDDIILRPPTLPLWKQTQ*GYSFQT Trigger: TGTCTGAAAAGAGTAACCCAACTGAGTCTGTTTCCA...AAGTGGTAGAGTTGGGGGCCTTAATATAATGTCATCCCAAAGTATCTGTCTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR CAA 90 bp | TCACATTCACCACACAGAAATGCTAACAAGATGTTACTAAATTCAACTGACCAGCTGCTGTTGCTAGGCTaGACCCTGTATTTTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SHSPHRNANKMLLNSTDQLLLLG*TLYFSG Trigger: TCCAGAAAAATACAGGGTCAAGCCTAGCAACAGCAG...CTGGTCAGTTGAATTTAGTAACATCTTGTTAGCATTTCTGTGTGGTGAATGTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS GCA 90 bp | AGTTGGTCTTCCAGTTTCCTATTGCTTTCTAGTAAACGATTGAGTTaGAGGTACAGATCTTCACTGGTTTTATCTGACATGGTGGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: SWSSSFLLLSSKRLS*RYRSSLVLSDMVEM Trigger: CATTTCCACCATGTCAGATAAAACCAGTGAAGATCTGTACCTGCAACTCAATCGTTTACTAGAAAGCAATAGGAAACTGGAAGACCAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR CAA 90 bp | TTTCCCAAAGTCCTTTTTAGTCACATTCACCACACAGAAATGCTAACAAGATGTCCATCACCTTGTTTCTaGGAACCTCTTTCCAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: FPKVLFSHIHHTEMLTRCPSPCF*EPLSRT Trigger: AGTTCTGGAAAGAGGTTCCAAGAAACAAGGTGATGG...ACATCTTGTTAGCATTTCTGTGTGGTGAATGTGACTAAAAAGGACTTTGGGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR CAA 90 bp | TCACATTCACCACACAGAAATGCTAACAAGATGTTACTAAATTCAACTGACCAGCCATCACCTTGTTTCTaGGAACCTCTTTCCAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: SHSPHRNANKMLLNSTDQPSPCF*EPLSRT Trigger: AGTTCTGGAAAGAGGTTCCAAGAAACAAGGTGATGG...CTGGTCAGTTGAATTTAGTAACATCTTGTTAGCATTTCTGTGTGGTGAATGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR CAA 90 bp | ATGAAATTTGAGACTAGGTTAACCAGCATTTGTATTTTAGGCTACTTGCAGATCCTGTGCTCCATCACCTaGTTTCTTGGAACCTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: MKFETRLTSICILGYLQILCSIT*FLGTSF Trigger: GAAAGAGGTTCCAAGAAACAAGGTGATGGAGCACAG...GATCTGCAAGTAGCCTAAAATACAAATGCTGGTTAACCTAGTCTCAAATTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR CAA 90 bp | TCACATTCACCACACAGAAATGCTAACAAGATGTTACTAAATTCAACTGACCAGTGGAAACAGACTCAGTaGGGTTACTCTTTTCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: SHSPHRNANKMLLNSTDQWKQTQ*GYSFQT Trigger: TGTCTGAAAAGAGTAACCCAACTGAGTCTGTTTCCA...CTGGTCAGTTGAATTTAGTAACATCTTGTTAGCATTTCTGTGTGGTGAATGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR CAA 90 bp | ATGAAATTTGAGACTAGGTTAACCAGCATTTGTATTTTAGGCTACTTGCAGATCAACCCAGTTATCATCTaGCTGAAGCCTTTCAACATC | + |
|
Preference number: 5 (lower is better) Translates to: MKFETRLTSICILGYLQINPVII*LKPFNI Trigger: GATGTTGAAAGGCTTCAGCAAGATGATAACTGGGTT...GATCTGCAAGTAGCCTAAAATACAAATGCTGGTTAACCTAGTCTCAAATTTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR CAA 90 bp | ATGAAATTTGAGACTAGGTTAACCAGCATTTGTATTTTAGGCTACTTGCAGATCCTATATCTTCCTTACTaGAGGTTTCATCCTCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: MKFETRLTSICILGYLQILYLPY*RFHPHW Trigger: CCAGTGAGGATGAAACCTCAAGTAAGGAAGATATAG...GATCTGCAAGTAGCCTAAAATACAAATGCTGGTTAACCTAGTCTCAAATTTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS-3UTR CAA 90 bp | TCTAATAATCAATGCCTCAAACGTCTCTCTAGCCAAACAACTCATTTCCAAGATTCTTCCAGTTTCCTATaGCTTTCTAGTAAACGATTG | + |
|
Preference number: 5 (lower is better) Translates to: SNNQCLKRLSSQTTHFQDSSSFL*LSSKRL Trigger: CAATCGTTTACTAGAAAGCAATAGGAAACTGGAAGA...ATCTTGGAAATGAGTTGTTTGGCTAGAGAGACGTTTGAGGCATTGATTATTAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS-3UTR CAA 90 bp | ATGAAATTTGAGACTAGGTTAACCAGCATTTGTATTTTAGGCTACTTGCAGATCTCATTTTCATCTTTTTaGGAAACAGACTCAGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: MKFETRLTSICILGYLQISFSSF*ETDSVG Trigger: CCCAACTGAGTCTGTTTCCAAAAAAGATGAAAATGA...GATCTGCAAGTAGCCTAAAATACAAATGCTGGTTAACCTAGTCTCAAATTTCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS TCA 72 bp | GGAAGTCATCATCTACCAGTGGTGGGTAGCTATACTTaGATGGATCTGTCCCACCCATGTGGGGAGGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GSHHLPVVGSYT*MDLSHPCGEAG Trigger: ACCTGCCTCCCCACATGGGTGGGACAGATCCATTCAAGTATAGCTACCCACCACTGGTAGATGATGACTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004715.2 ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS CAA 90 bp | GGAGAAACGATGATATCAATGGAAGCTCCGGGATCGCAGCTGCTGTaGCTAGGCTTGACCCTGTATTTTTCTGGAGCTGTGGTTCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: GETMISMEAPGSQLL*LGLTLYFSGAVVLT Trigger: GGTGAGAACCACAGCTCCAGAAAAATACAGGGTCAAGCCTAGCAACAGCAGCTGCGATCCCGGAGCTTCCATTGATATCATCGTTTCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004715.2 ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS TCA 72 bp | TCCATCACCTTGTTTCTTGGAACCTCTTTCCAGAACTaGCTCAGTTCTGCAGGCCCAGTGCCAGATGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: SITLFLGTSFQN*LSSAGPVPDDC Trigger: GCAGTCATCTGGCACTGGGCCTGCAGAACTGAGTCAGTTCTGGAAAGAGGTTCCAAGAAACAAGGTGATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004715.2 ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS CAA 90 bp | ATGATATCAATGGAAGCTCCGGGATCGCAGCTGCTGTTGCTAGGCTaGACCCTGTATTTTTCTGGAGCTGTGGTTCTCACCTTAAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: MISMEAPGSQLLLLG*TLYFSGAVVLTLKA Trigger: GGCCTTTAAGGTGAGAACCACAGCTCCAGAAAAATACAGGGTCAAGCCTAGCAACAGCAGCTGCGATCCCGGAGCTTCCATTGATATCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004715.2 ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS CAA 72 bp | ATGATATCAATGGAAGCTCCGGGATCGCAGCTGCTGTaGCTAGGCTTGACCCTGTATTTTTCTGGAGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: MISMEAPGSQLL*LGLTLYFSGAV Trigger: CACAGCTCCAGAAAAATACAGGGTCAAGCCTAGCAACAGCAGCTGCGATCCCGGAGCTTCCATTGATATCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004715.2 ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS TCA 72 bp | TTTTATCTGACATGGTGGAAATGCTGTCCTTCAGCATaGGACTGTTCGGTTTGCTGCTCTCAACGGTGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: FYLTWWKCCPSA*DCSVCCSQRCD Trigger: GTCACACCGTTGAGAGCAGCAAACCGAACAGTCTCATGCTGAAGGACAGCATTTCCACCATGTCAGATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004715.2 ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS CCA 72 bp | ACAAAGTGGTGTCTGGAAGTCATCATCTACCAGTGGTaGGTAGCTATACTTGAATGGATCTGTCCCACCCAT | + |
|
Preference number: 6 (lower is better) Translates to: TKWCLEVIIYQW*VAILEWICPTH Trigger: ATGGGTGGGACAGATCCATTCAAGTATAGCTACCCACCACTGGTAGATGATGACTTCCAGACACCACTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004715.2 ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS CCA 72 bp | TTCACAAAGTGGTGTCTGGAAGTCATCATCTACCAGTaGTGGGTAGCTATACTTGAATGGATCTGTCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: FTKWCLEVIIYQ*WVAILEWICPT Trigger: GGTGGGACAGATCCATTCAAGTATAGCTACCCACCACTGGTAGATGATGACTTCCAGACACCACTTTGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004715.2 ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS CAA 72 bp | TGTGACATCTTAGCCTGTGCTCCATCACCTTGTTTCTaGGAACCTCTTTCCAGAACTGACTCAGTTCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: CDILACAPSPCF*EPLSRTDSVLQ Trigger: CTGCAGAACTGAGTCAGTTCTGGAAAGAGGTTCCAAGAAACAAGGTGATGGAGCACAGGCTAAGATGTCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004715.2 ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS CAA 90 bp | TCGGACATGTCAAACATCACTGTGATAGGTTTCCCGTTTTCTCTCTaGGCATATCGTTCCAACCAGAATGCTATGAGCTTCTTCTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SDMSNITVIGFPFSL*AYRSNQNAMSFFLS Trigger: GGACAAGAAGAAGCTCATAGCATTCTGGTTGGAACGATATGCCAAGAGAGAAAACGGGAAACCTATCACAGTGATGTTTGACATGTCCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004715.2 ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS TCA 72 bp | TCACTAAGGTCATTGACAGAGAACTCTTTCCTCCACTaGAAACTCTCGTCAAGCATCTTCAGGGTTTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: SLRSLTENSFLH*KLSSSIFRVSS Trigger: GGATGAAACCCTGAAGATGCTTGACGAGAGTTTTCAGTGGAGGAAAGAGTTCTCTGTCAATGACCTTAGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004715.2 ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS CCA 72 bp | AGACTCAGTTGGGTTACTCTTTTCAGACAGAGCTGGTaGCTCCTCATTAGAAATCGTTTCCAAGGTTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: RLSWVTLFRQSW*LLIRNRFQGFL Trigger: AAGGAAACCTTGGAAACGATTTCTAATGAGGAGCCACCAGCTCTGTCTGAAAAGAGTAACCCAACTGAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004715.2 ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS CCA 72 bp | AGCAGTAGCTGTTGGAACCAGATAGAGCGCTGTAGTTaGTCTTCCAGTTTCCTATTGCTTTCTAGTAAACGA | + |
|
Preference number: 6 (lower is better) Translates to: SSSCWNQIERCS*SSSFLLLSSKR Trigger: TCGTTTACTAGAAAGCAATAGGAAACTGGAAGACCAACTACAGCGCTCTATCTGGTTCCAACAGCTACTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS CAA 90 bp | CACCTTCTATATCTTCCTTACTTGAGGTTTCATCCTCACTGGCAATaGGCCCATTTTCACAAAGTGGTGTCTGGAAGTCATCATCTACCA | + |
|
Preference number: 6 (lower is better) Translates to: HLLYLPYLRFHPHWQ*AHFHKVVSGSHHLP Trigger: TGGTAGATGATGACTTCCAGACACCACTTTGTGAAAATGGGCCAATTGCCAGTGAGGATGAAACCTCAAGTAAGGAAGATATAGAAGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004715.2 ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS CAA 90 bp | TGTTGGAACCAGATAGAGCGCTGTAGTTGGTCTTCCAGTTTCCTATaGCTTTCTAGTAAACGATTGAGTTGCAGGTACAGATCTTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: CWNQIERCSWSSSFL*LSSKRLSCRYRSSL Trigger: CAGTGAAGATCTGTACCTGCAACTCAATCGTTTACTAGAAAGCAATAGGAAACTGGAAGACCAACTACAGCGCTCTATCTGGTTCCAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004715.2 |
||
| CDS GCA 72 bp | CCCGTTTTCTCTCTTGGCATATCGTTCCAACCAGAATaGTATGAGCTTCTTCTTGTCCATTATGGTTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PVFSLGISFQPE*YELLLVHYGFL Trigger: CAGAAAACCATAATGGACAAGAAGAAGCTCATAGCATTCTGGTTGGAACGATATGCCAAGAGAGAAAACGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004715.2 ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS CCA 72 bp | CTTCTATATCTTCCTTACTTGAGGTTTCATCCTCACTaGCAATTGGCCCATTTTCACAAAGTGGTGTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LLYLPYLRFHPH*QLAHFHKVVSG Trigger: TCCAGACACCACTTTGTGAAAATGGGCCAATTGCCAGTGAGGATGAAACCTCAAGTAAGGAAGATATAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004715.2 ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS CAA 72 bp | TCAAACATCACTGTGATAGGTTTCCCGTTTTCTCTCTaGGCATATCGTTCCAACCAGAATGCTATGAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SNITVIGFPFSL*AYRSNQNAMSF Trigger: GAAGCTCATAGCATTCTGGTTGGAACGATATGCCAAGAGAGAAAACGGGAAACCTATCACAGTGATGTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004715.2 ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS CAA 72 bp | TATCTTCCTTACTTGAGGTTTCATCCTCACTGGCAATaGGCCCATTTTCACAAAGTGGTGTCTGGAAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: YLPYLRFHPHWQ*AHFHKVVSGSH Trigger: ATGACTTCCAGACACCACTTTGTGAAAATGGGCCAATTGCCAGTGAGGATGAAACCTCAAGTAAGGAAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004715.2 ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS CCA 72 bp | ATGTGGGGAGGCAGGTATTCCACACTGACATACTCCTaGATTTCATTCTTACTTGTAAACTTCAACAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: MWGGRYSTLTYS*ISFLLVNFNKL Trigger: AAGCTTGTTGAAGTTTACAAGTAAGAATGAAATCCAGGAGTATGTCAGTGTGGAATACCTGCCTCCCCACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004715.2 ENSMUST00000112247.9 ENSMUST00000112248.9 |
||
| CDS TCA 72 bp | TTTCTCTCTTGGCATATCGTTCCAACCAGAATGCTATaGGCTTCTTCTTGTCCATTATGGTTTTCTGATCTT | + |
|
Preference number: 6 (lower is better) Translates to: FLSWHIVPTRML*ASSCPLWFSDL Trigger: AAGATCAGAAAACCATAATGGACAAGAAGAAGCTCATAGCATTCTGGTTGGAACGATATGCCAAGAGAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004715.2 ENSMUST00000112247.9 ENSMUST00000112248.9 |
||