Pregenerated sensors for MOSMO (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046096Ensembl transcript IDs: ENSMUST00000060175.8, ENSMUST00000207065.2, ENSMUST00000208454.2, ENSMUST00000208873.2
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCTGGACGGAACAGGTGGTGGAAAGCGTCCTTCCTCCGACTGACTaGAGGCTTCTCACACAGAGGGGTCCACTTCTCCAAGGTTCCTGT | + |
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Preference number: 1 (lower is better) Translates to: AWTEQVVESVLPPTD*RLLTQRGPLLQGSC Trigger: ACAGGAACCTTGGAGAAGTGGACCCCTCTGTGTGAGAAGCCTGCAGTCAGTCGGAGGAAGGACGCTTTCCACCACCTGTTCCGTCCAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060175.8 ENSMUST00000208873.2 |
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| 3UTR CCA 90 bp | CGCCTCATTAAAAGAGCATCCACACAACGCAGTTACAGCTGTGGGTaGGCGTCCTGGTCTTGCAGTGCGGACGCTGATGGGACTGTGTGG | + |
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Preference number: 1 (lower is better) Translates to: RLIKRASTQRSYSCG*ASWSCSADADGTVW Trigger: CCACACAGTCCCATCAGCGTCCGCACTGCAAGACCAGGACGCCCACCCACAGCTGTAACTGCGTTGTGTGGATGCTCTTTTAATGAGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208454.2 |
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| 3UTR GCA 90 bp | CAGAGGCGTCAATCAGAGCAGAAGCTGAGGTCTCCCATTGTGGACTaGAAGCCTGGAGCAGAGGACTGGGAATGGCATGCAGCTCTGACA | + |
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Preference number: 1 (lower is better) Translates to: QRRQSEQKLRSPIVD*KPGAEDWEWHAALT Trigger: TGTCAGAGCTGCATGCCATTCCCAGTCCTCTGCTCCAGGCTTGCAGTCCACAATGGGAGACCTCAGCTTCTGCTCTGATTGACGCCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
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| 3UTR CCA 90 bp | GGGTGGGCGTCCTGGTCTTGCAGTGCGGACGCTGATGGGACTGTGTaGTCTATTTCATGGCCAAGTGAGTGGTGCTCCAGGAAGATTTAC | + |
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Preference number: 1 (lower is better) Translates to: GWASWSCSADADGTV*SISWPSEWCSRKIY Trigger: GTAAATCTTCCTGGAGCACCACTCACTTGGCCATGAAATAGACCACACAGTCCCATCAGCGTCCGCACTGCAAGACCAGGACGCCCACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208454.2 |
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| 3UTR CCA 90 bp | TCAATCAGAGCAGAAGCTGAGGTCTCCCATTGTGGACTGCAAGCCTaGAGCAGAGGACTGGGAATGGCATGCAGCTCTGACATCTCAAAG | + |
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Preference number: 1 (lower is better) Translates to: SIRAEAEVSHCGLQA*SRGLGMACSSDISK Trigger: CTTTGAGATGTCAGAGCTGCATGCCATTCCCAGTCCTCTGCTCCAGGCTTGCAGTCCACAATGGGAGACCTCAGCTTCTGCTCTGATTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
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| 3UTR CCA 90 bp | CTCAAGGAGACACCTCTTCTTAAACCTCCCCAAACAGCCACCAACTaGGGACCAAGACCCAAACATCTGAGACTATGGGGCACAGTCTCA | + |
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Preference number: 1 (lower is better) Translates to: LKETPLLKPPQTATN*GPRPKHLRLWGTVS Trigger: TGAGACTGTGCCCCATAGTCTCAGATGTTTGGGTCTTGGTCCCCAGTTGGTGGCTGTTTGGGGAGGTTTAAGAAGAGGTGTCTCCTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
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| 3UTR GCA 90 bp | TGCTACAGTACTGTGCTGTTTCCAGACAGGCTAGCCTTGCAACGATaGGATGTAGCTGAAGATTACCTTAAGCCTTGGCTTCTACCTCCT | + |
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Preference number: 1 (lower is better) Translates to: CYSTVLFPDRLALQR*DVAEDYLKPWLLPP Trigger: AGGAGGTAGAAGCCAAGGCTTAAGGTAATCTTCAGCTACATCGCATCGTTGCAAGGCTAGCCTGTCTGGAAACAGCACAGTACTGTAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
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| 3UTR TCA 90 bp | CACTTCAACAACGTTTGGTCTGAGAGAGTTTACAAAGACTGGACTTaGCACACTACTCGATGGGATGGTCTTAATCCTGGGCTAGAGCGC | + |
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Preference number: 1 (lower is better) Translates to: HFNNVWSERVYKDWT*HTTRWDGLNPGLER Trigger: GCGCTCTAGCCCAGGATTAAGACCATCCCATCGAGTAGTGTGTCAAGTCCAGTCTTTGTAAACTCTCTCAGACCAAACGTTGTTGAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060175.8 ENSMUST00000208873.2 |
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| 3UTR TCA 90 bp | GCAGGCTTCTCACACAGAGGGGTCCACTTCTCCAAGGTTCCTGTATaGGCCCAAACACTGGGTTTTCATTCACAATTTAATACTGAGACA | + |
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Preference number: 1 (lower is better) Translates to: AGFSHRGVHFSKVPV*AQTLGFHSQFNTET Trigger: TGTCTCAGTATTAAATTGTGAATGAAAACCCAGTGTTTGGGCTCATACAGGAACCTTGGAGAAGTGGACCCCTCTGTGTGAGAAGCCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
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| 3UTR TCA 90 bp | CAACCACCAAACCTTTCCTTCAGAGTGACCCATTTGACTGATGACTaGTCAAAGCCCAATCCCGAATGTCCACAGAACATGTCTAGTGGT | + |
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Preference number: 1 (lower is better) Translates to: QPPNLSFRVTHLTDD*SKPNPECPQNMSSG Trigger: ACCACTAGACATGTTCTGTGGACATTCGGGATTGGGCTTTGATCAGTCATCAGTCAAATGGGTCACTCTGAAGGAAAGGTTTGGTGGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060175.8 ENSMUST00000208873.2 |
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| 3UTR GCA 90 bp | CAGGTAACCCATCTCCGAATACCATCCTGTGAGGGAGAATCGAGTTaGTTAGGAGTCATTCCCATTTGTTTGAAGTACAGGCTATGTAAG | + |
|
Preference number: 1 (lower is better) Translates to: QVTHLRIPSCEGESS*LGVIPICLKYRLCK Trigger: CTTACATAGCCTGTACTTCAAACAAATGGGAATGACTCCTAAGCAACTCGATTCTCCCTCACAGGATGGTATTCGGAGATGGGTTACCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
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| 3UTR TCA 90 bp | GATGTAGCTGAAGATTACCTTAAGCCTTGGCTTCTACCTCCTGAATaGTCGAGTTACAGGCAAGTCCCATTATACCTGGTTTACTCAGTG | + |
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Preference number: 1 (lower is better) Translates to: DVAEDYLKPWLLPPE*SSYRQVPLYLVYSV Trigger: CACTGAGTAAACCAGGTATAATGGGACTTGCCTGTAACTCGATCATTCAGGAGGTAGAAGCCAAGGCTTAAGGTAATCTTCAGCTACATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
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| 3UTR TCA 90 bp | GAAGTGGAAACCACTCAGACTACTGGTAGCTCCACAGCACAAACCTaGACCACTTCAGTTACAGAAAGGAATAACGCCTCATTAAAAGAG | + |
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Preference number: 1 (lower is better) Translates to: EVETTQTTGSSTAQT*TTSVTERNNASLKE Trigger: CTCTTTTAATGAGGCGTTATTCCTTTCTGTAACTGAAGTGGTTCAGGTTTGTGCTGTGGAGCTACCAGTAGTCTGAGTGGTTTCCACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208454.2 |
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| 3UTR CCA 90 bp | GATCGAGTTACAGGCAAGTCCCATTATACCTGGTTTACTCAGTGCTaGGGACTGAACACACTCTACCAAGTTACTTCTTTAACAAGACAG | + |
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Preference number: 1 (lower is better) Translates to: DRVTGKSHYTWFTQC*GLNTLYQVTSLTRQ Trigger: CTGTCTTGTTAAAGAAGTAACTTGGTAGAGTGTGTTCAGTCCCCAGCACTGAGTAAACCAGGTATAATGGGACTTGCCTGTAACTCGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
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| 3UTR TCA 90 bp | ATAGCCAAAACAGCCAGATATTTGCTAGTGACCTTAATGTTTATGTaGAGTTGTATGCCTGAACGTATACACTGCATTGTTAACGTAGCA | + |
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Preference number: 1 (lower is better) Translates to: IAKTARYLLVTLMFM*SCMPERIHCIVNVA Trigger: TGCTACGTTAACAATGCAGTGTATACGTTCAGGCATACAACTTCACATAAACATTAAGGTCACTAGCAAATATCTGGCTGTTTTGGCTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
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| 3UTR-3UTR GCA 90 bp | CTTACGGTTCCAGAGGCGTCAATCAGAGCAGAAGCTGAGGTCTCCCATTGTGGAAGAGGACTGCCCAGATaGCTTCTCTTTGTCCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: LTVPEASIRAEAEVSHCGRGLPR*LLFVLP Trigger: TGGGAGGACAAAGAGAAGGCATCTGGGCAGTCCTCT...TCCACAATGGGAGACCTCAGCTTCTGCTCTGATTGACGCCTCTGGAACCGTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
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| 3UTR CAA 90 bp | AGTGAGTGGTGCTCCAGGAAGATTTACCGCTCCTTAGGACCGATCTaGATAGTCGTCGTGAAACTGCCACTGTGCTGCCTTCTAGAACAA | + |
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Preference number: 2 (lower is better) Translates to: SEWCSRKIYRSLGPI*IVVVKLPLCCLLEQ Trigger: TTGTTCTAGAAGGCAGCACAGTGGCAGTTTCACGACGACTATCAAGATCGGTCCTAAGGAGCGGTAAATCTTCCTGGAGCACCACTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208454.2 |
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| 3UTR-3UTR TCA 90 bp | CTTACGGTTCCAGAGGCGTCAATCAGAGCAGAAGCTGAGGTCTCCCATTGTGGAAAGAATGAGGTAAACTaGAGACTCTCTCCACTATGC | + |
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Preference number: 2 (lower is better) Translates to: LTVPEASIRAEAEVSHCGKNEVN*RLSPLC Trigger: GCATAGTGGAGAGAGTCTTCAGTTTACCTCATTCTT...TCCACAATGGGAGACCTCAGCTTCTGCTCTGATTGACGCCTCTGGAACCGTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
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| 3UTR-3UTR CCA 90 bp | ACAACACTAACACAACCAGGAGGCCAGGTCTCTGTAAGGGAAAATGCTACAGTAACAGGCATGGGAATGTaGGGAGGAAAGGACTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: TTLTQPGGQVSVRENATVTGMGM*GGKDWV Trigger: AACCCAGTCCTTTCCTCCCCACATTCCCATGCCTGT...TACTGTAGCATTTTCCCTTACAGAGACCTGGCCTCCTGGTTGTGTTAGTGTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
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| 3UTR-3UTR GCA 90 bp | ACAACGTTTGGTCTGAGAGAGTTTACAAAGACTGGACTTGACACACTACTCGATCTTCCTCCGACTGACTaGAGGCTTCTCACACAGAGG | + |
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Preference number: 2 (lower is better) Translates to: TTFGLREFTKTGLDTLLDLPPTD*RLLTQR Trigger: CCTCTGTGTGAGAAGCCTGCAGTCAGTCGGAGGAAG...ATCGAGTAGTGTGTCAAGTCCAGTCTTTGTAAACTCTCTCAGACCAAACGTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060175.8 ENSMUST00000208873.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAGTCAGAAACATCACACCCACACTAACAACACAGAACATGGATTACCTTTGGGACGGAACAGGTGGTaGAAAGCGTCCTTCCTCCGA | + |
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Preference number: 2 (lower is better) Translates to: RSQKHHTHTNNTEHGLPLGRNRW*KASFLR Trigger: TCGGAGGAAGGACGCTTTCCACCACCTGTTCCGTCC...CAAAGGTAATCCATGTTCTGTGTTGTTAGTGTGGGTGTGATGTTTCTGACTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060175.8 ENSMUST00000208873.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCCCAGATTTATCTTTATTTTGCTGGCAGACACCAGTACTTTCCAGAAGTGGACGCAGTTACAGCTGTaGGTGGGCGTCCTGGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: FPRFIFILLADTSTFQKWTQLQL*VGVLVL Trigger: CAAGACCAGGACGCCCACCCACAGCTGTAACTGCGT...CCACTTCTGGAAAGTACTGGTGTCTGCCAGCAAAATAAAGATAAATCTGGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208454.2 |
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| 3UTR CAA 90 bp | TGTAGTACTCATAGTGACCTTTTAAAAGCAGCTGCTGGCAGCTGTTaGTCCGTCCACTTACAGGACCGATTACACGGATTAGTCCACTTC | + |
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Preference number: 2 (lower is better) Translates to: CSTHSDLLKAAAGSC*SVHLQDRLHGLVHF Trigger: GAAGTGGACTAATCCGTGTAATCGGTCCTGTAAGTGGACGGACAAACAGCTGCCAGCAGCTGCTTTTAAAAGGTCACTATGAGTACTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060175.8 ENSMUST00000208873.2 |
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| 3UTR-3UTR TCA 90 bp | CGCACAACACCACACGGAGAAATCAAAGCTGTAGGCAAAACCCAAGAATGTGTTGGCTGCTACAAAGAATaGGGTAAACTGAAGACTCTC | + |
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Preference number: 2 (lower is better) Translates to: RTTPHGEIKAVGKTQECVGCYKE*GKLKTL Trigger: GAGAGTCTTCAGTTTACCTCATTCTTTGTAGCAGCC...AACACATTCTTGGGTTTTGCCTACAGCTTTGATTTCTCCGTGTGGTGTTGTGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
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| 3UTR-3UTR GCA 90 bp | CTCAGACTACTGGTAGCTCCACAGCACAAACCTGAACCACTTCAGTTACAGAAAGTGAAACTGCCACTGTaGTGCCTTCTAGAACAACTT | + |
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Preference number: 2 (lower is better) Translates to: LRLLVAPQHKPEPLQLQKVKLPL*CLLEQL Trigger: AAGTTGTTCTAGAAGGCAGCACAGTGGCAGTTTCAC...TTTCTGTAACTGAAGTGGTTCAGGTTTGTGCTGTGGAGCTACCAGTAGTCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208454.2 |
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| 3UTR-3UTR CCA 90 bp | CGCACAACACCACACGGAGAAATCAAAGCTGTAGGCAAAACCCAAGAATGTGTTCCTCCTGCACCCTTCTaGTCCATCATGATTCATAAA | + |
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Preference number: 2 (lower is better) Translates to: RTTPHGEIKAVGKTQECVPPAPF*SIMIHK Trigger: TTTATGAATCATGATGGACCAGAAGGGTGCAGGAGG...AACACATTCTTGGGTTTTGCCTACAGCTTTGATTTCTCCGTGTGGTGTTGTGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
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| 3UTR-3UTR GCA 90 bp | AGAAGTCAGAAACATCACACCCACACTAACAACACAGAACATGGATTACCTTTGCCCATCAGCTCTTCATaGACTGGCCTTCCAAGACAA | + |
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Preference number: 2 (lower is better) Translates to: RSQKHHTHTNNTEHGLPLPISSS*TGLPRQ Trigger: TTGTCTTGGAAGGCCAGTGCATGAAGAGCTGATGGG...CAAAGGTAATCCATGTTCTGTGTTGTTAGTGTGGGTGTGATGTTTCTGACTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060175.8 ENSMUST00000208873.2 |
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| 3UTR-3UTR CCA 90 bp | GATTTATCTTTATTTTGCTGGCAGACACCAGTACTTTCCAGAAGTGGAAACCACGCTGATGGGACTGTGTaGTCTATTTCATGGCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: DLSLFCWQTPVLSRSGNHADGTV*SISWPS Trigger: ACTTGGCCATGAAATAGACCACACAGTCCCATCAGC...GTGGTTTCCACTTCTGGAAAGTACTGGTGTCTGCCAGCAAAATAAAGATAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208454.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGTGACAAGATTCAAACAAGTGTTCCCCAGGAAGAATCGAGGTGTTGACACAACCTTAATGTTTATGTaGAGTTGTATGCCTGAACGT | + |
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Preference number: 2 (lower is better) Translates to: LVTRFKQVFPRKNRGVDTTLMFM*SCMPER Trigger: ACGTTCAGGCATACAACTTCACATAAACATTAAGGT...TGTGTCAACACCTCGATTCTTCCTGGGGAACACTTGTTTGAATCTTGTCACAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
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| 3UTR-3UTR GCA 90 bp | GATTTATCTTTATTTTGCTGGCAGACACCAGTACTTTCCAGAAGTGGAAACCACAAACTGCCACTGTGCTaGCTTCTAGAACAACTTAGT | + |
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Preference number: 2 (lower is better) Translates to: DLSLFCWQTPVLSRSGNHKLPLC*LLEQLS Trigger: ACTAAGTTGTTCTAGAAGGCAGCACAGTGGCAGTTT...GTGGTTTCCACTTCTGGAAAGTACTGGTGTCTGCCAGCAAAATAAAGATAAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208454.2 |
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| 3UTR-3UTR GCA 90 bp | ACAACGTTTGGTCTGAGAGAGTTTACAAAGACTGGACTTGACACACTACTCGATGAGTTCAGAATCAGCTaGATTGCTGTTTCTACAAAA | + |
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Preference number: 2 (lower is better) Translates to: TTFGLREFTKTGLDTLLDEFRIS*IAVSTK Trigger: TTTTGTAGAAACAGCAATGCAGCTGATTCTGAACTC...ATCGAGTAGTGTGTCAAGTCCAGTCTTTGTAAACTCTCTCAGACCAAACGTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
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| 3UTR-3UTR CCA 90 bp | ACCTATTACAGAAACCTGTCAAAATCAAAGGCTGCTACAAAGAATGAGGTAAACAACGGCAATCCATTGTaGTGCCAAAGGCTCATAACA | + |
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Preference number: 2 (lower is better) Translates to: TYYRNLSKSKAATKNEVNNGNPL*CQRLIT Trigger: TGTTATGAGCCTTTGGCACCACAATGGATTGCCGTT...GTTTACCTCATTCTTTGTAGCAGCCTTTGATTTTGACAGGTTTCTGTAATAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
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| 3UTR-3UTR GCA 90 bp | ATAGATGACAATTGTTATTCATTCCAACAGTGTCAGATTCCCCAAACTATAAGGCTATTGGCTTCTTGGTaGAGTAATGCAACGGCAATC | + |
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Preference number: 2 (lower is better) Translates to: IDDNCYSFQQCQIPQTIRLLASW*SNATAI Trigger: GATTGCCGTTGCATTACTGCACCAAGAAGCCAATAG...CCTTATAGTTTGGGGAATCTGACACTGTTGGAATGAATAACAATTGTCATCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
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| 3UTR-3UTR CCA 90 bp | AATACAACTAAAATTCTGTGTAGACAATTCTACCTACACAGACCACCTTTTTCCCCAAACTATAAGGTTTaGCATGACCTTACCTTTACT | + |
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Preference number: 2 (lower is better) Translates to: NTTKILCRQFYLHRPPFSPNYKV*HDLTFT Trigger: AGTAAAGGTAAGGTCATGCCAAACCTTATAGTTTGG...GGAAAAAGGTGGTCTGTGTAGGTAGAATTGTCTACACAGAATTTTAGTTGTATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
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| 3UTR GCA 72 bp | GGACTGCAAGCCTGGAGCAGAGGACTGGGAATGGCATaGAGCTCTGACATCTCAAAGCCCAGCCCCAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: GLQAWSRGLGMA*SSDISKPSPRD Trigger: GTCTCTGGGGCTGGGCTTTGAGATGTCAGAGCTGCATGCCATTCCCAGTCCTCTGCTCCAGGCTTGCAGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
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| 3UTR TCA 72 bp | GACGGAACAGGTGGTGGAAAGCGTCCTTCCTCCGACTaGCTGCAGGCTTCTCACACAGAGGGGTCCACTTCT | + |
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Preference number: 3 (lower is better) Translates to: DGTGGGKRPSSD*LQASHTEGSTS Trigger: AGAAGTGGACCCCTCTGTGTGAGAAGCCTGCAGTCAGTCGGAGGAAGGACGCTTTCCACCACCTGTTCCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060175.8 ENSMUST00000208873.2 |
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| 3UTR TCA 72 bp | ACTCGATGGGATGGTCTTAATCCTGGGCTAGAGCGCTaGGTGGCTAGAGGGGCTTCCCCCATCAGCTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: TRWDGLNPGLER*VARGASPISSS Trigger: TGAAGAGCTGATGGGGGAAGCCCCTCTAGCCACTCAGCGCTCTAGCCCAGGATTAAGACCATCCCATCGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060175.8 ENSMUST00000208873.2 |
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| 3UTR GCA 72 bp | GAACAGGTGGTGGAAAGCGTCCTTCCTCCGACTGACTaGAGGCTTCTCACACAGAGGGGTCCACTTCTCCAA | + |
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Preference number: 3 (lower is better) Translates to: EQVVESVLPPTD*RLLTQRGPLLQ Trigger: TTGGAGAAGTGGACCCCTCTGTGTGAGAAGCCTGCAGTCAGTCGGAGGAAGGACGCTTTCCACCACCTGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060175.8 ENSMUST00000208873.2 |
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| 3UTR CCA 72 bp | TCCTGGTCTTGCAGTGCGGACGCTGATGGGACTGTGTaGTCTATTTCATGGCCAAGTGAGTGGTGCTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: SWSCSADADGTV*SISWPSEWCSR Trigger: CCTGGAGCACCACTCACTTGGCCATGAAATAGACCACACAGTCCCATCAGCGTCCGCACTGCAAGACCAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208454.2 |
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| 3UTR GCA 72 bp | CAATCAGAGCAGAAGCTGAGGTCTCCCATTGTGGACTaGAAGCCTGGAGCAGAGGACTGGGAATGGCATGCA | + |
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Preference number: 3 (lower is better) Translates to: QSEQKLRSPIVD*KPGAEDWEWHA Trigger: TGCATGCCATTCCCAGTCCTCTGCTCCAGGCTTGCAGTCCACAATGGGAGACCTCAGCTTCTGCTCTGATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
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| 3UTR TCA 72 bp | AGCCTGGAGCAGAGGACTGGGAATGGCATGCAGCTCTaGCATCTCAAAGCCCAGCCCCAGAGACATGTTTTT | + |
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Preference number: 3 (lower is better) Translates to: SLEQRTGNGMQL*HLKAQPQRHVF Trigger: AAAAACATGTCTCTGGGGCTGGGCTTTGAGATGTCAGAGCTGCATGCCATTCCCAGTCCTCTGCTCCAGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
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| 3UTR GCA 72 bp | GGGACTGTGTGGTCTATTTCATGGCCAAGTGAGTGGTaGTCCAGGAAGATTTACCGCTCCTTAGGACCGATC | + |
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Preference number: 3 (lower is better) Translates to: GTVWSISWPSEW*SRKIYRSLGPI Trigger: GATCGGTCCTAAGGAGCGGTAAATCTTCCTGGAGCACCACTCACTTGGCCATGAAATAGACCACACAGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208454.2 |
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| 3UTR CCA 72 bp | GATGGGACTGTGTGGTCTATTTCATGGCCAAGTGAGTaGTGCTCCAGGAAGATTTACCGCTCCTTAGGACCG | + |
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Preference number: 3 (lower is better) Translates to: DGTVWSISWPSE*CSRKIYRSLGP Trigger: CGGTCCTAAGGAGCGGTAAATCTTCCTGGAGCACCACTCACTTGGCCATGAAATAGACCACACAGTCCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208454.2 |
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| 3UTR-3UTR CAA 90 bp | CTTACGGTTCCAGAGGCGTCAATCAGAGCAGAAGCTGAGGTCTCCCATTGTGGAGGAAGAATCGAGGTGTaGACACAGGCATGGGAATGT | + |
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Preference number: 3 (lower is better) Translates to: LTVPEASIRAEAEVSHCGGRIEV*TQAWEC Trigger: ACATTCCCATGCCTGTGTCAACACCTCGATTCTTCC...TCCACAATGGGAGACCTCAGCTTCTGCTCTGATTGACGCCTCTGGAACCGTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
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| 3UTR-3UTR CAA 90 bp | CAACTGGGGACCAAGACCCAAACATCTGAGACTATGGGGCACAGTCTCATTCCTGCACACCACAGTGTTTaGCTAGCAAGCATTCAGAGT | + |
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Preference number: 3 (lower is better) Translates to: QLGTKTQTSETMGHSLIPAHHSV*LASIQS Trigger: ACTCTGAATGCTTGCTAGCAAAACACTGTGGTGTGC...AGGAATGAGACTGTGCCCCATAGTCTCAGATGTTTGGGTCTTGGTCCCCAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
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| 3UTR TCA 72 bp | ATTCAAACAAGTGTTCCCCAGGAAGAATCGAGGTGTTaGCACAGGCATGGGAATGTGGGGAGGAAAGGACTG | + |
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Preference number: 3 (lower is better) Translates to: IQTSVPQEESRC*HRHGNVGRKGL Trigger: CAGTCCTTTCCTCCCCACATTCCCATGCCTGTGTCAACACCTCGATTCTTCCTGGGGAACACTTGTTTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
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| 3UTR-3UTR CAA 90 bp | CTTACGGTTCCAGAGGCGTCAATCAGAGCAGAAGCTGAGGTCTCCCATTGTGGACCACCCACCCCAAACTaGTTTCTTAGTGTTTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LTVPEASIRAEAEVSHCGPPTPN*FLSVFF Trigger: AAAGAAAACACTAAGAAACAAGTTTGGGGTGGGTGG...TCCACAATGGGAGACCTCAGCTTCTGCTCTGATTGACGCCTCTGGAACCGTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
||
| 3UTR TCA 72 bp | CCTTTTCAGCATCAGGTTCATCTAAGCATCTTCCTATaGGAGGACTGCCCAGATGCCTTCTCTTTGTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: PFQHQVHLSIFL*EDCPDAFSLSS Trigger: GGAGGACAAAGAGAAGGCATCTGGGCAGTCCTCTCATAGGAAGATGCTTAGATGAACCTGATGCTGAAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTACGGTTCCAGAGGCGTCAATCAGAGCAGAAGCTGAGGTCTCCCATTGTGGAGTCATTCCCATTTGTTaGAAGTACAGGCTATGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: LTVPEASIRAEAEVSHCGVIPIC*KYRLCK Trigger: CTTACATAGCCTGTACTTCAAACAAATGGGAATGAC...TCCACAATGGGAGACCTCAGCTTCTGCTCTGATTGACGCCTCTGGAACCGTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
||
| 3UTR TCA 72 bp | ACCACTCAGACTACTGGTAGCTCCACAGCACAAACCTaGACCACTTCAGTTACAGAAAGGAATAACGCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: TTQTTGSSTAQT*TTSVTERNNAS Trigger: TGAGGCGTTATTCCTTTCTGTAACTGAAGTGGTTCAGGTTTGTGCTGTGGAGCTACCAGTAGTCTGAGTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208454.2 |
||
| 3UTR CCA 72 bp | CTGAATGATCGAGTTACAGGCAAGTCCCATTATACCTaGTTTACTCAGTGCTGGGGACTGAACACACTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: LNDRVTGKSHYT*FTQCWGLNTLY Trigger: GTAGAGTGTGTTCAGTCCCCAGCACTGAGTAAACCAGGTATAATGGGACTTGCCTGTAACTCGATCATTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
||
| 3UTR TCA 72 bp | AACCTTTCCTTCAGAGTGACCCATTTGACTGATGACTaGTCAAAGCCCAATCCCGAATGTCCACAGAACATG | + |
|
Preference number: 3 (lower is better) Translates to: NLSFRVTHLTDD*SKPNPECPQNM Trigger: CATGTTCTGTGGACATTCGGGATTGGGCTTTGATCAGTCATCAGTCAAATGGGTCACTCTGAAGGAAAGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060175.8 ENSMUST00000208873.2 |
||
| 3UTR TCA 72 bp | AACGTTTGGTCTGAGAGAGTTTACAAAGACTGGACTTaGCACACTACTCGATGGGATGGTCTTAATCCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: NVWSERVYKDWT*HTTRWDGLNPG Trigger: CCCAGGATTAAGACCATCCCATCGAGTAGTGTGTCAAGTCCAGTCTTTGTAAACTCTCTCAGACCAAACGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060175.8 ENSMUST00000208873.2 |
||
| 3UTR GCA 72 bp | CATCTCCGAATACCATCCTGTGAGGGAGAATCGAGTTaGTTAGGAGTCATTCCCATTTGTTTGAAGTACAGG | + |
|
Preference number: 3 (lower is better) Translates to: HLRIPSCEGESS*LGVIPICLKYR Trigger: CCTGTACTTCAAACAAATGGGAATGACTCCTAAGCAACTCGATTCTCCCTCACAGGATGGTATTCGGAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
||
| 3UTR GCA 72 bp | GTTACAGGCAAGTCCCATTATACCTGGTTTACTCAGTaGTGGGGACTGAACACACTCTACCAAGTTACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: VTGKSHYTWFTQ*WGLNTLYQVTS Trigger: AGAAGTAACTTGGTAGAGTGTGTTCAGTCCCCAGCACTGAGTAAACCAGGTATAATGGGACTTGCCTGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
||
| 3UTR TCA 72 bp | TCACACAGAGGGGTCCACTTCTCCAAGGTTCCTGTATaGGCCCAAACACTGGGTTTTCATTCACAATTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: SHRGVHFSKVPV*AQTLGFHSQFN Trigger: ATTAAATTGTGAATGAAAACCCAGTGTTTGGGCTCATACAGGAACCTTGGAGAAGTGGACCCCTCTGTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
||
| 3UTR CCA 72 bp | CAAAACAGATGGAACAGAAACCAGGCTTGTGAGAGATaGAGAAGTCAGAAACATCACACCCACACTAACAAC | + |
|
Preference number: 3 (lower is better) Translates to: QNRWNRNQACER*RSQKHHTHTNN Trigger: GTTGTTAGTGTGGGTGTGATGTTTCTGACTTCTCCATCTCTCACAAGCCTGGTTTCTGTTCCATCTGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060175.8 ENSMUST00000208873.2 |
||
| 3UTR CCA 72 bp | ACAGGCAAGTCCCATTATACCTGGTTTACTCAGTGCTaGGGACTGAACACACTCTACCAAGTTACTTCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: TGKSHYTWFTQC*GLNTLYQVTSL Trigger: TAAAGAAGTAACTTGGTAGAGTGTGTTCAGTCCCCAGCACTGAGTAAACCAGGTATAATGGGACTTGCCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
||
| 3UTR CCA 72 bp | TCCACTTCTCCAAGGTTCCTGTATGAGCCCAAACACTaGGTTTTCATTCACAATTTAATACTGAGACAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: STSPRFLYEPKH*VFIHNLILRQL Trigger: CAGCTGTCTCAGTATTAAATTGTGAATGAAAACCCAGTGTTTGGGCTCATACAGGAACCTTGGAGAAGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
||
| 3UTR TCA 72 bp | ATTACACGGATTAGTCCACTTCAACAACGTTTGGTCTaGGAGAGTTTACAAAGACTGGACTTGACACACTAC | + |
|
Preference number: 3 (lower is better) Translates to: ITRISPLQQRLV*ESLQRLDLTHY Trigger: GTAGTGTGTCAAGTCCAGTCTTTGTAAACTCTCTCAGACCAAACGTTGTTGAAGTGGACTAATCCGTGTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060175.8 ENSMUST00000208873.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAGATGACAATTGTTATTCATTCCAACAGTGTCAGATTCCCCAAACTATAAGGTGCAACGGCAATCCATaGTGGTGCCAAAGGCTCATA | + |
|
Preference number: 3 (lower is better) Translates to: IDDNCYSFQQCQIPQTIRCNGNP*WCQRLI Trigger: TATGAGCCTTTGGCACCACAATGGATTGCCGTTGCA...CCTTATAGTTTGGGGAATCTGACACTGTTGGAATGAATAACAATTGTCATCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGTCAGAAACATCACACCCACACTAACAACACAGAACATGGATTACCTTTGGCATTAGAGGGAATATaGTATTGCTTAAGAGTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: RSQKHHTHTNNTEHGLPLALEGI*YCLRVW Trigger: CCAAACTCTTAAGCAATACAATATTCCCTCTAATGC...CAAAGGTAATCCATGTTCTGTGTTGTTAGTGTGGGTGTGATGTTTCTGACTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
||
| 3UTR TCA 72 bp | TCAAAATCAAAGGCTGCTACAAAGAATGAGGTAAACTaGAGACTCTCTCCACTATGCAGCCTTCAGATAAAT | + |
|
Preference number: 3 (lower is better) Translates to: SKSKAATKNEVN*RLSPLCSLQIN Trigger: ATTTATCTGAAGGCTGCATAGTGGAGAGAGTCTTCAGTTTACCTCATTCTTTGTAGCAGCCTTTGATTTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
||
| 3UTR-3UTR CAA 90 bp | AATACAACTAAAATTCTGTGTAGACAATTCTACCTACACAGACCACCTTTTTCCTCGTCCAGGAACTGTTaGCATGTGTGCATATACAAA | + |
|
Preference number: 3 (lower is better) Translates to: NTTKILCRQFYLHRPPFSSSRNC*HVCIYK Trigger: TTTGTATATGCACACATGCAAACAGTTCCTGGACGA...GGAAAAAGGTGGTCTGTGTAGGTAGAATTGTCTACACAGAATTTTAGTTGTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
||
| CDS-3UTR TCA 90 bp | TGCAGGTCCGGTCTCGTCCATGGATTGTCTGACACTGCCGCACCAGGCCCACAGCCGACTCCCCGGTGTTaGTCCAGTCCGGGTTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: CRSGLVHGLSDTAAPGPQPTPRC*SSPGWR Trigger: TCGCCAACCCGGACTGGATCAACACCGGGGAGTCGG...CTGTGGGCCTGGTGCGGCAGTGTCAGACAATCCATGGACGAGACCGGACCTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207065.2 |
||
| CDS-3UTR GCA 90 bp | CGGACGCTGATGGGACTGTGTGGTCTATTTCATGGCCAAGTGAGTGGTGCTCCACAGGCCCACAGTGAGTaGTCCCGCCGACTCCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RTLMGLCGLFHGQVSGAPQAHSE*SRRLPG Trigger: ACCGGGGAGTCGGCGGGAGCACTCACTGTGGGCCTG...TGGAGCACCACTCACTTGGCCATGAAATAGACCACACAGTCCCATCAGCGTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208454.2 |
||
| CDS-3UTR TCA 90 bp | AACAAGTGTTCCCCAGGAAGAATCGAGGTGTTGACACAGGCATGGGAATGTGGGGCACCAGGCCCACAGTaGGTGCTCCCGCCGACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NKCSPGRIEVLTQAWECGAPGPQ*VLPPTP Trigger: GGGAGTCGGCGGGAGCACTCACTGTGGGCCTGGTGC...CCCACATTCCCATGCCTGTGTCAACACCTCGATTCTTCCTGGGGAACACTTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
||
| CDS-3UTR TCA 90 bp | GGACCGATCTTGATAGTCGTCGTGAAACTGCCACTGTGCTGCCTTCTAGAACAAGCACCAGGCCCACAGTaGGTGCTCCCGCCGACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GPILIVVVKLPLCCLLEQAPGPQ*VLPPTP Trigger: GGGAGTCGGCGGGAGCACTCACTGTGGGCCTGGTGC...TTGTTCTAGAAGGCAGCACAGTGGCAGTTTCACGACGACTATCAAGATCGGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208454.2 |
||
| CDS-3UTR TCA 90 bp | TCCTTAGGACCGATCTTGATAGTCGTCGTGAAACTGCCACTGTGCTGCCTTCTACCGACTCCCCGGTGTTaGTCCAGTCCGGGTTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SLGPILIVVVKLPLCCLLPTPRC*SSPGWR Trigger: TCGCCAACCCGGACTGGATCAACACCGGGGAGTCGG...TAGAAGGCAGCACAGTGGCAGTTTCACGACGACTATCAAGATCGGTCCTAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208454.2 |
||
| CDS-3UTR CCA 90 bp | TGCAGGTCCGGTCTCGTCCATGGATTGTCTGACACTGCCGCACCAGGCCCACAGTCTCCCATACTGATGTaGGTTCCAGGGATCAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: CRSGLVHGLSDTAAPGPQSPILM*VPGIRH Trigger: ATGTCTGATCCCTGGAACCCACATCAGTATGGGAGA...CTGTGGGCCTGGTGCGGCAGTGTCAGACAATCCATGGACGAGACCGGACCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207065.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTTAGGACCGATCTTGATAGTCGTCGTGAAACTGCCACTGTGCTGCCTTCTGGTGGTGACCCATTCTaGGGGAAGCCGAGGAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLRTDLDSRRETATVLPSGGDPF*GKPRRD Trigger: ATCCCTCCTCGGCTTCCCCCAGAATGGGTCACCACC...AGAAGGCAGCACAGTGGCAGTTTCACGACGACTATCAAGATCGGTCCTAAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208454.2 |
||
| CDS-3UTR TCA 90 bp | CGCACAACACCACACGGAGAAATCAAAGCTGTAGGCAAAACCCAAGAATGTGTTCGTCCATGGATTGTCTaGCACTGCCGCACCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RTTPHGEIKAVGKTQECVRPWIV*HCRTRP Trigger: GGGCCTGGTGCGGCAGTGTCAGACAATCCATGGACG...AACACATTCTTGGGTTTTGCCTACAGCTTTGATTTCTCCGTGTGGTGTTGTGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
||
| CDS-3UTR TCA 90 bp | ATCTTGATAGTCGTCGTGAAACTGCCACTGTGCTGCCTTCTAGAACAACTTAGTCGTCCATGGATTGTCTaGCACTGCCGCACCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ILIVVVKLPLCCLLEQLSRPWIV*HCRTRP Trigger: GGGCCTGGTGCGGCAGTGTCAGACAATCCATGGACG...ACTAAGTTGTTCTAGAAGGCAGCACAGTGGCAGTTTCACGACGACTATCAAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208454.2 |
||
| CDS-3UTR CCA 90 bp | CGCACAACACCACACGGAGAAATCAAAGCTGTAGGCAAAACCCAAGAATGTGTTGGTGGTGACCCATTCTaGGGGAAGCCGAGGAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RTTPHGEIKAVGKTQECVGGDPF*GKPRRD Trigger: ATCCCTCCTCGGCTTCCCCCAGAATGGGTCACCACC...AACACATTCTTGGGTTTTGCCTACAGCTTTGATTTCTCCGTGTGGTGTTGTGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060175.8 ENSMUST00000208873.2 |
||
| CDS-3UTR TCA 90 bp | CTATTTATTTCACTGAAGAGATTAAACAGTGAACTCGCACAACACCACACGGAGCCGACTCCCCGGTGTTaGTCCAGTCCGGGTTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LFISLKRLNSELAQHHTEPTPRC*SSPGWR Trigger: TCGCCAACCCGGACTGGATCAACACCGGGGAGTCGG...CTCCGTGTGGTGTTGTGCGAGTTCACTGTTTAATCTCTTCAGTGAAATAAATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
||
| CDS-3UTR GCA 90 bp | GGGAAATTCATAGCAGCTGAGAAACTTTCTCTCCCCATGCTCATGATCCAGTTAGAAGCCGAGGAGGGATaGAGGTCCGGTCTCGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GKFIAAEKLSLPMLMIQLEAEEG*RSGLVH Trigger: ATGGACGAGACCGGACCTGCATCCCTCCTCGGCTTC...TAACTGGATCATGAGCATGGGGAGAGAAAGTTTCTCAGCTGCTATGAATTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
||
| CDS-3UTR GCA 90 bp | AATACAACTAAAATTCTGTGTAGACAATTCTACCTACACAGACCACCTTTTTCCCAGGCCCACAGTGAGTaGTCCCGCCGACTCCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: NTTKILCRQFYLHRPPFSQAHSE*SRRLPG Trigger: ACCGGGGAGTCGGCGGGAGCACTCACTGTGGGCCTG...GGAAAAAGGTGGTCTGTGTAGGTAGAATTGTCTACACAGAATTTTAGTTGTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
||
| CDS-3UTR GCA 90 bp | GATTTATCTTTATTTTGCTGGCAGACACCAGTACTTTCCAGAAGTGGAAACCACGAAGCCGAGGAGGGATaGAGGTCCGGTCTCGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DLSLFCWQTPVLSRSGNHEAEEG*RSGLVH Trigger: ATGGACGAGACCGGACCTGCATCCCTCCTCGGCTTC...GTGGTTTCCACTTCTGGAAAGTACTGGTGTCTGCCAGCAAAATAAAGATAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208454.2 |
||
| CDS-3UTR CCA 90 bp | CTATTTATTTCACTGAAGAGATTAAACAGTGAACTCGCACAACACCACACGGAGGGTGGTGACCCATTCTaGGGGAAGCCGAGGAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LFISLKRLNSELAQHHTEGGDPF*GKPRRD Trigger: ATCCCTCCTCGGCTTCCCCCAGAATGGGTCACCACC...CTCCGTGTGGTGTTGTGCGAGTTCACTGTTTAATCTCTTCAGTGAAATAAATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060175.8 ENSMUST00000208873.2 |
||
| CDS-3UTR GCA 90 bp | GTGCGGACGCTGATGGGACTGTGTGGTCTATTTCATGGCCAAGTGAGTGGTGCTCTTACTTCCAGTGAATaGTATCCATCGAGCATATTT | + |
|
Preference number: 4 (lower is better) Translates to: VRTLMGLCGLFHGQVSGALTSSE*YPSSIF Trigger: AAATATGCTCGATGGATAGCATTCACTGGAAGTAAG...AGCACCACTCACTTGGCCATGAAATAGACCACACAGTCCCATCAGCGTCCGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208454.2 |
||
| 3UTR CAA 72 bp | CATAGTGACCTTTTAAAAGCAGCTGCTGGCAGCTGTTaGTCCGTCCACTTACAGGACCGATTACACGGATTA | + |
|
Preference number: 4 (lower is better) Translates to: HSDLLKAAAGSC*SVHLQDRLHGL Trigger: TAATCCGTGTAATCGGTCCTGTAAGTGGACGGACAAACAGCTGCCAGCAGCTGCTTTTAAAAGGTCACTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060175.8 ENSMUST00000208873.2 |
||
| CDS-3UTR GCA 90 bp | ACAACACTAACACAACCAGGAGGCCAGGTCTCTGTAAGGGAAAATGCTACAGTAGATCATTCCAGTGAATaGTATCCATCGAGCATATTT | + |
|
Preference number: 4 (lower is better) Translates to: TTLTQPGGQVSVRENATVDHSSE*YPSSIF Trigger: AAATATGCTCGATGGATAGCATTCACTGGAATGATC...TACTGTAGCATTTTCCCTTACAGAGACCTGGCCTCCTGGTTGTGTTAGTGTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
||
| CDS-3UTR TCA 90 bp | CTATTTATTTCACTGAAGAGATTAAACAGTGAACTCGCACAACACCACACGGAGAATACCATCTTCCAGTaGATGCTATCCATCGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LFISLKRLNSELAQHHTENTIFQ*MLSIEH Trigger: ATGCTCGATGGATAGCATTCACTGGAAGATGGTATT...CTCCGTGTGGTGTTGTGCGAGTTCACTGTTTAATCTCTTCAGTGAAATAAATAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208873.2 |
||
| CDS-3UTR GCA 90 bp | CTATTTATTTCACTGAAGAGATTAAACAGTGAACTCGCACAACACCACACGGAGCCATCTTCCAGTGAATaGTATCCATCGAGCATATTT | + |
|
Preference number: 4 (lower is better) Translates to: LFISLKRLNSELAQHHTEPSSSE*YPSSIF Trigger: AAATATGCTCGATGGATAGCATTCACTGGAAGATGG...CTCCGTGTGGTGTTGTGCGAGTTCACTGTTTAATCTCTTCAGTGAAATAAATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208873.2 |
||
| 3UTR CAA 72 bp | CACACCCACACTAACAACACAGAACATGGATTACCTTaGGAAAGAATTGTACTAATGGTTGCTTTTAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: HTHTNNTEHGLP*ERIVLMVAFNE Trigger: TTCATTAAAAGCAACCATTAGTACAATTCTTTCCAAAGGTAATCCATGTTCTGTGTTGTTAGTGTGGGTGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060175.8 ENSMUST00000208873.2 |
||
| 3UTR CAA 72 bp | AAGCTCTTGGTCATGTCACTTAATTTGAACTATACTTaGCTAATACTTTGTATCAGTGGTATAATGCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: KLLVMSLNLNYT*LILCISGIMPT Trigger: GGTTGGCATTATACCACTGATACAAAGTATTAGCAAAGTATAGTTCAAATTAAGTGACATGACCAAGAGCTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060175.8 ENSMUST00000208873.2 |
||
| CDS-3UTR CAA 90 bp | TGCAGGTCCGGTCTCGTCCATGGATTGTCTGACACTGCCGCACCAGGCCCACAGGCCGACTCCCCGGTGTaGATCCAGTCCGGGTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: CRSGLVHGLSDTAAPGPQADSPV*IQSGLA Trigger: CGCCAACCCGGACTGGATCAACACCGGGGAGTCGGC...CTGTGGGCCTGGTGCGGCAGTGTCAGACAATCCATGGACGAGACCGGACCTGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207065.2 |
||
| CDS-3UTR CAA 90 bp | CCGACTGACTGCAGGCTTCTCACACAGAGGGGTCCACTTCTCCAAGGTTCCTGTGCCGACTCCCCGGTGTaGATCCAGTCCGGGTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PTDCRLLTQRGPLLQGSCADSPV*IQSGLA Trigger: CGCCAACCCGGACTGGATCAACACCGGGGAGTCGGC...ACAGGAACCTTGGAGAAGTGGACCCCTCTGTGTGAGAAGCCTGCAGTCAGTCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
||
| CDS-3UTR CAA 90 bp | TCCTTAGGACCGATCTTGATAGTCGTCGTGAAACTGCCACTGTGCTGCCTTCTAGCCGACTCCCCGGTGTaGATCCAGTCCGGGTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SLGPILIVVVKLPLCCLLADSPV*IQSGLA Trigger: CGCCAACCCGGACTGGATCAACACCGGGGAGTCGGC...TAGAAGGCAGCACAGTGGCAGTTTCACGACGACTATCAAGATCGGTCCTAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208454.2 |
||
| CDS-3UTR CAA 90 bp | TGCAGGTCCGGTCTCGTCCATGGATTGTCTGACACTGCCGCACCAGGCCCACAGGGCCAAAGGACAGCTTaGTGGAGCAACAAGAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: CRSGLVHGLSDTAAPGPQGQRTA*WSNKNK Trigger: CTTGTTCTTGTTGCTCCACAAAGCTGTCCTTTGGCC...CTGTGGGCCTGGTGCGGCAGTGTCAGACAATCCATGGACGAGACCGGACCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207065.2 |
||
| CDS-3UTR CAA 90 bp | ACAACGTTTGGTCTGAGAGAGTTTACAAAGACTGGACTTGACACACTACTCGATGGTCTCGTCCATGGATaGTCTGACACTGCCGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: TTFGLREFTKTGLDTLLDGLVHG*SDTAAP Trigger: TGGTGCGGCAGTGTCAGACAATCCATGGACGAGACC...ATCGAGTAGTGTGTCAAGTCCAGTCTTTGTAAACTCTCTCAGACCAAACGTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
||
| CDS-3UTR CAA 90 bp | TGTTTTCCCAGATTTATCTTTATTTTGCTGGCAGACACCAGTACTTTCCAGAAGGGTCTCGTCCATGGATaGTCTGACACTGCCGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: CFPRFIFILLADTSTFQKGLVHG*SDTAAP Trigger: TGGTGCGGCAGTGTCAGACAATCCATGGACGAGACC...CTTCTGGAAAGTACTGGTGTCTGCCAGCAAAATAAAGATAAATCTGGGAAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208454.2 |
||
| CDS-3UTR CAA 90 bp | CTTGTGACAAGATTCAAACAAGTGTTCCCCAGGAAGAATCGAGGTGTTGACACACCTGGTAAACAGACTTaGCCAGCAAACAGAAGTCCT | + |
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Preference number: 5 (lower is better) Translates to: LVTRFKQVFPRKNRGVDTPGKQT*PANRSP Trigger: AGGACTTCTGTTTGCTGGCAAAGTCTGTTTACCAGG...TGTGTCAACACCTCGATTCTTCCTGGGGAACACTTGTTTGAATCTTGTCACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060175.8 |
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| CDS CCA 72 bp | GTGGAGCAACAAGAACAAGCTTCTCCCATACTGATGTaGGTTCCAGGGATCAGACATGTGGTCCAGCCCGCC | + |
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Preference number: 6 (lower is better) Translates to: VEQQEQASPILM*VPGIRHVVQPA Trigger: GGCGGGCTGGACCACATGTCTGATCCCTGGAACCCACATCAGTATGGGAGAAGCTTGTTCTTGTTGCTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207065.2 |
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| CDS TCA 72 bp | GCTTTGTGGAGCAACAAGAACAAGCTTCTCCCATACTaGTGTGGGTTCCAGGGATCAGACATGTGGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: ALWSNKNKLLPY*CGFQGSDMWSS Trigger: GCTGGACCACATGTCTGATCCCTGGAACCCACATCAGTATGGGAGAAGCTTGTTCTTGTTGCTCCACAAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207065.2 |
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